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finish revisions to Universal tree items section
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MDhelp/README.md

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MDhelp/docs/applicationwindow.md

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# GSAS-II GUI Organization
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The GSAS-II GUI uses three windows, which are described below. The main window has two parts. To the left is the "Data Tree" and to the right is the "Data Window". A second window, called the "Plots Window" is used for graphics such as plots of data or display of three-dimensional structures. The third window, the Console window, is used to show output from the program.

MDhelp/docs/commontreeitems.md

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MDhelp/docs/datatree.md

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# GSAS-II data tree overview
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GSAS-II creates projects that are saved in `.gpx` files. The GSAS-II data tree, which is shown on the left side of the main GSAS-II window shows a hierarchical index to the contents of a project. This index will usually have all of the entries listed below on the [Universal Data Tree Items](./commontreeitems.md) page, which are found in all types of GSAS-II projects and will also have at least one entry representing some sort of experimental data (or simulation) -- called a histogram -- and will likely have one or more phase entries.

MDhelp/docs/index.md

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# Help for GSAS-II
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This and the subsequent web pages provide documentation for the
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2. [GSAS-II GUI Organization](./applicationwindow.md)
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1. [Data Tree](./applicationwindow.md#Data_tree)
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1. [Data Window](./applicationwindow.md#Data_frame)
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1. [Plots Window](./applicationwindow.md#Plots)
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1. [Graphics Window](./applicationwindow.md#Plots)
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1. [Console Window](./applicationwindow.md#Console)
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3. [Main menu contents](./mainmenu.md)
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4. Data Tree headings, graphics windows and menu commands
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1. [Top-level](./datatree.md) Data Tree headings
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4. Data tree entries and their use
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1. [Data tree overview](./datatree.md)
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1. [Universal data tree](./commontreeitems.md) items
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2. [Phase](./phase.md) Data Tree headings
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3. [Image (IMG)](./image.md) Data Tree headings
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4. [Powder histogram (PWDR)](./histgramtree.md) Data Tree headings

MDhelp/docs/mainmenu.md

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<a name="main_menu"></a>
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# GSAS-II Main menu commands
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MDhelp/docs/others.md

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# Miscellaneous information
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<a name="MacOS"></a>

MDhelp/docs/preface.md

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# GSAS-II Tutorials
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<a name="Tutorial"></a>
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