Bugfix ring location, Ring -> RING, window size larger

Author: AlessioDelConte

GUIs/plugin.ui

@@ -7,7 +7,7 @@
     <x>0</x>
     <y>0</y>
     <width>620</width>
-    <height>815</height>
+    <height>790</height>
    </rect>
   </property>
   <property name="sizePolicy">
@@ -24,8 +24,8 @@
   </property>
   <property name="maximumSize">
    <size>
-    <width>700</width>
-    <height>850</height>
+    <width>900</width>
+    <height>900</height>
    </size>
   </property>
   <property name="windowTitle">
@@ -676,7 +676,7 @@
           <item>
            <widget class="QGroupBox" name="groupBox_12">
             <property name="sizePolicy">
-             <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
+             <sizepolicy hsizetype="Preferred" vsizetype="Minimum">
               <horstretch>0</horstretch>
               <verstretch>0</verstretch>
              </sizepolicy>
@@ -701,7 +701,7 @@
              <item row="3" column="0">
               <widget class="QDoubleSpinBox" name="coeff_thr">
                <property name="sizePolicy">
-                <sizepolicy hsizetype="Minimum" vsizetype="Fixed">
+                <sizepolicy hsizetype="Minimum" vsizetype="Minimum">
                  <horstretch>0</horstretch>
                  <verstretch>0</verstretch>
                 </sizepolicy>
@@ -726,7 +726,7 @@
              <item row="1" column="0">
               <widget class="QSpinBox" name="min_presence">
                <property name="sizePolicy">
-                <sizepolicy hsizetype="Minimum" vsizetype="Fixed">
+                <sizepolicy hsizetype="Minimum" vsizetype="Minimum">
                  <horstretch>0</horstretch>
                  <verstretch>0</verstretch>
                 </sizepolicy>
@@ -751,7 +751,7 @@
              <item row="3" column="1">
               <widget class="QDoubleSpinBox" name="p_thr">
                <property name="sizePolicy">
-                <sizepolicy hsizetype="Minimum" vsizetype="Fixed">
+                <sizepolicy hsizetype="Minimum" vsizetype="Minimum">
                  <horstretch>0</horstretch>
                  <verstretch>0</verstretch>
                 </sizepolicy>
@@ -786,7 +786,7 @@
              <item row="1" column="1">
               <widget class="QSpinBox" name="max_presence">
                <property name="sizePolicy">
-                <sizepolicy hsizetype="Minimum" vsizetype="Fixed">
+                <sizepolicy hsizetype="Minimum" vsizetype="Minimum">
                  <horstretch>0</horstretch>
                  <verstretch>0</verstretch>
                 </sizepolicy>
@@ -1305,6 +1305,12 @@
             <layout class="QVBoxLayout" name="verticalLayout_11">
              <item>
               <widget class="QDoubleSpinBox" name="rmsd_val">
+               <property name="sizePolicy">
+                <sizepolicy hsizetype="Minimum" vsizetype="Minimum">
+                 <horstretch>0</horstretch>
+                 <verstretch>0</verstretch>
+                </sizepolicy>
+               </property>
                <property name="alignment">
                 <set>Qt::AlignCenter</set>
                </property>
@@ -1345,6 +1351,12 @@
             <layout class="QVBoxLayout" name="verticalLayout_9">
              <item>
               <widget class="QSpinBox" name="n_cluster">
+               <property name="sizePolicy">
+                <sizepolicy hsizetype="Minimum" vsizetype="Minimum">
+                 <horstretch>0</horstretch>
+                 <verstretch>0</verstretch>
+                </sizepolicy>
+               </property>
                <property name="alignment">
                 <set>Qt::AlignCenter</set>
                </property>
@@ -1672,7 +1684,7 @@
                 </sizepolicy>
                </property>
                <property name="text">
-                <string>Ring-md executable:</string>
+                <string>RING executable:</string>
                </property>
               </widget>
              </item>
@@ -2216,8 +2228,11 @@
              </item>
              <item row="4" column="1">
               <widget class="QCheckBox" name="override_memory">
+               <property name="toolTip">
+                <string>Usefull when structure has been modified</string>
+               </property>
                <property name="text">
-                <string>Re-execute Ring each time</string>
+                <string>Do not save RING output</string>
                </property>
               </widget>
              </item>

main_window.py

@@ -31,10 +31,10 @@ def __init__(self, app=None, parent=None):
         self.corr_dialog = CorrelationDialog(self)
         self.freq_dialog = FreqDialog(self)
 
-        if os.path.exists("{}/.ring/bin/Ring-md".format(environ['HOME'])):
+        if os.path.exists("{}/.ring/bin/Ring".format(environ['HOME'])):
             self.widg.ring_path.setText("{}/.ring/bin/Ring".format(environ['HOME']))
         else:
-            self.log("Ring-md path not found in current directory, please set it manually", warning=True)
+            self.log("RING path not found in current directory, please set it manually", warning=True)
 
         # Execute Ring
         self.widg.visualize_btn.clicked.connect(self.run)
@@ -316,7 +316,7 @@ def refresh_sele(self):
                 and not self.widg.override_memory.isChecked():
             self.widg.visualize_btn.setText("Show")
         else:
-            self.widg.visualize_btn.setText("Execute Ring")
+            self.widg.visualize_btn.setText("Execute RING")
 
     def visualize(self, selection=None, color=None, int_type=None):
         from pymol import stored
@@ -553,7 +553,7 @@ def resi_plot_fn(self):
 
         if not os.path.exists(file_pth):
             self.log(
-                    "Before this you need to run Ring-md on the whole object first. Select it above and press the Show button",
+                    "Before this you need to run RING on the whole object first. Select it above and press the Show button",
                     error=True)
             return
 
@@ -626,7 +626,7 @@ def inter_heatmap(self):
         if sele_inter != "ALL":
             file_pth = "/tmp/ring/md/" + stored.model + ".gfreq_{}".format(sele_inter)
             if not os.path.exists(file_pth):
-                self.log("Before this you need to run Ring-md on the object first!", error=True)
+                self.log("Before this you need to run RING on the object first!", error=True)
                 return
 
             contact_freq = dict()
@@ -695,7 +695,7 @@ def get_values_from_input(self):
         file_pth = "/tmp/ring/" + stored.model + ".cif_ringEdges"
         if not os.path.exists(file_pth):
             self.log(
-                    "Before this you need to run Ring-md on the object first. Select it above and press the Show button",
+                    "Before this you need to run RING on the object first. Select it above and press the Show button",
                     error=True)
             raise ValueError