INSPIIRED Maintainer

[gmilton-425]

Hello, is there currently a Maintainer for the INSPIIRED platform? I am encountering several issues trying to execute the pipeline.

[chasberry]

I ping'ed John Everett re recent queries that are unanswered. He had not gotten any alerts - maybe sent to an older email account. He said he would check. He is off this week, so I'd not expect a reply till around 4/12 at earliest.

[helixscript]

Hi everyone, I apologize for the delayed response, an older account is linked to this repository and my colleagues brought the recent issues to my attention. I am traveling this week but will review the issues when I return April 12th. Issues with the CONDA environment are known. We have a collection of Linux R source packages archived for this project which we will make available as a potential path forward for satisfying the required environment. Best, John

…

On Mon, Apr 5, 2021, 3:18 PM chasberry ***@***.***> wrote: I ping'ed John Everett re recent queries that are unanswered. He had not gotten any alerts - maybe sent to an older email account. He said he would check. He is off this week, so I'd not expect a reply till around 4/12 at earliest. — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#10 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AB2ISQ55DUKABATOI44XTFDTHISKZANCNFSM42NL6LDQ> .

[gmilton-425]

Hello @helixscript have you made the Linux R source packages available for use?

[Gmilton425]

I ping'ed John Everett re recent queries that are unanswered. He had not gotten any alerts - maybe sent to an older email account. He said he would check. He is off this week, so I'd not expect a reply till around 4/12 at earliest.

@chasberry Would you be able to ping John again to ask him to revisit the linux & R package workaround? @helixscript @cnobles

[marencc]

Hello @helixscript and @chasberry, have you found a turn around? I have the VM working, but I have not sufficient memory to run with my samples... I'm trying to build a docker image (or so, to use with singularity in my institution's HPC), but I would be superuseful if we have access to the workaround!!! (I've tried several times the conda env but I didn't work, I kept on having dependency errors)