0.0.31

Author: John Major

pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "snakemake-executor-plugin-pcluster-slurm"
-version = "0.0.30"
+version = "0.0.31"
 description = "A Snakemake executor plugin for submitting jobs to an AWS Parallel Cluster (pcluster) SLURM cluster."
 authors = [
     "John Major <john@daylilyinformatics.com>",

snakemake_executor_plugin_pcluster_slurm/__init__.py

@@ -330,7 +330,7 @@ def cancel_jobs(self, active_jobs: List[SubmittedJobInfo]):
                 # about 30 sec, but can be longer in extreme cases.
                 # Under 'normal' circumstances, 'scancel' is executed in
                 # virtually no time.
-                scancel_command = f"scancel {jobids} --clusters=all"
+                scancel_command = f"scancel {jobids} "
 
                 subprocess.check_output(
                     scancel_command,