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NEWS.md

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# stochtree 0.1.2
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# stochtree 0.2.0
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## New Features
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* Fixed indexing bug in cleanup of grow-from-root (GFR) samples in BART and BCF models
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* Avoid using covariate preprocessor in `computeForestLeafIndices` function when a `ForestSamples` object is provided (rather than a `bartmodel` or `bcfmodel` object)
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* Correctly compute feature-specific split counts in R and Python ([#220](https://github.com/StochasticTree/stochtree/issues/220))
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* Avoid override of user-specified `num_burnin` parameter in BCF models with an internal propensity score ([#222](https://github.com/StochasticTree/stochtree/issues/222))
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* Outcome predictions correctly incorporate adaptive coding of untreated observations in BCF with binary treatment ([#231](https://github.com/StochasticTree/stochtree/issues/231))
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## Documentation Improvements
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* Clarify structure / layout of samples when users request multiple chains in BART and BCF models ([#220](https://github.com/StochasticTree/stochtree/issues/220))
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## Other Changes
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* Standardized naming conventions for out of sample data in prediction and posterior computation routines (we raise warnings when data are passed through `y`, `X`, `Z`, etc... arguments)
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* Covariates / features are always referred to as "covariates" rather than "X"
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* Treatment is referred to as "treatment" rather than "Z"
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* Propensity scores are referred to as "propensity" rather than "pi_X"
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* Outcomes are referred to as "outcome" rather than "Y"
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* Standardized naming conventions for data elements of BART and BCF models across R and Python interfaces
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* Covariates / features are always referred to as "`X`"
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* Treatment is always referred to as "`Z`"
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* Propensity scores are referred to as "`propensity`" (rather than "`pi`")
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* Outcomes are referred to as "`y`"
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* Basis vectors for leaf-wise regression models in forest terms are referred to as "`leaf_basis`"
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* Group labels for additive random effects models are referred to as "`rfx_group_ids`"
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* Basis vectors for additive random effects models are referred to as "`rfx_basis`"
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* Run-time checks for variables that are treated as continuous but have many "ties" (which presents issues with the current GFR algorithm) when only GFR samples are requested ([#243](https://github.com/StochasticTree/stochtree/pull/243))
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# stochtree 0.1.1
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