added raw apptainer def file that does not make use of a requirements.txt i.e. full original receipe but less details on the python dependencies and versions

Author: albenoit

install/tf2_addons.raw.def

@@ -0,0 +1,65 @@
+BootStrap: docker
+From: tensorflow/tensorflow:2.11.0-gpu-jupyter
+
+%post
+    export DEBIAN_FRONTEND=noninteractive
+    pip list
+    apt-get update
+    apt-get -qq  install -y ipython3
+    apt-get -qq  install -y python3-gdal
+    apt-get -qq  install -y python3-tk
+    apt-get -qq  install -y graphviz
+    apt-get -qq  install -y redis-server
+    apt-get -qq  install -y build-essential cmake git pkg-config libjpeg8-dev libtiff5-dev  libavcodec-dev libavformat-dev libswscale-dev libv4l-dev  libgtk2.0-dev libatlas-base-dev gfortran
+    apt-get -qq  install -y nvidia-modprobe libcupti-dev
+    apt-get -qq  install -y python3-pip
+    apt-get -qq  install -y gstreamer1.0-opencv libopencv-contrib-dev python3-opencv
+    python3 -m pip install pytest pytest-cov
+    python3 -m pip install flask
+    python3 -m pip install sqlalchemy Flask-SQLAlchemy
+    python3 -m pip install -U tensorboard_plugin_profile
+    python3 -m pip install redis
+    python3 -m pip install pandas-profiling great-expectations
+    python3 -m pip install kafka-python
+    python3 -m pip install msgpack msgpack-numpy
+    python3 -m pip install numba==0.53.1
+    python3 -m pip install shap
+    python3 -m pip install scikit-learn
+    python3 -m pip install scikit-image
+    python3 -m pip install hyperopt
+    python3 -m pip install statsmodels
+    python3 -m pip install rasterio
+    python3 -m pip install geopandas
+    python3 -m pip install shapely
+    python3 -m pip install plotly
+    python3 -m pip install seaborn
+    python3 -m pip install pydot pydot-ng
+    python3 -m pip install ipywidgets bqplot    
+    python3 -m pip install tensorflow-datasets tensorflow-addons==0.19.0 #tensorflow-federated==0.18.0
+    python3 -m pip install -q git+https://github.com/tensorflow/examples.git
+    python3 -m pip install tensorflow-io==0.29.0 tensorflow-probability==0.19.0
+    python3 -m pip install tensorflow-serving-api-gpu==2.11.0
+    python3 -m pip install tensorflow-model-optimization==0.7.3
+    
+    python3 -m pip install flwr
+    #python3 -m pip install tfx==0.25.0
+    #python3 -m pip install Pillow
+    python3 -m pip install POT
+    python3 -m pip install cdlib
+    
+    python3 -m pip list
+
+%runscript
+    exec /usr/bin/python3 "$@"
+
+%help
+    A singularity container ready to run Tensorflow with optimized compilation with NVIDIA GPUs with compute capacity >5. Additional libraries have been added to the standard nvidia tensorflow container to run all the DeepLearningTools framework (https://github.com/albenoit/DeepLearningTools). Usage example:
+
+    * build the container: singularity build tf2_addons.sif tf2_addons.def
+
+    * running as a shell : singularity shell --nv --bind /workspace/DeepLearningTools/:/DeepLearningTools/ tf2_addons.sif
+
+    * running python scripts : cd DeepLearningTools && singularity run tf_nv_addons_py3.sif experiments_manager.py --usersettings=examples/regression/mysettings_curve_fitting.py
+
+%labels
+    Author Alexandre Benoit, LISTIC Lab, june 2021