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prepareDataFromscRNA函数的colnames(mean_gene_exp) <- levels(Seurat::Idents(object))这行代码是不是有错? #147

@wuyong0103

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@wuyong0103

您好!

我看了一下prepareDataFromscRNA函数的这两行代码
colnames(mean_gene_exp) <- gsub(pattern = "\.", replacement = " ", name1)
colnames(mean_gene_exp) <- levels(Seurat::Idents(object))
第一行没有问题,是按照AverageExpression直接计算出来的顺序给的(按照字母顺序排的),而第二行是按照Idents(object)出现的顺序给的。感觉第二行是多余的,会造成mean_gene_exp列命名错误,也就导致后面的绘图出现错误。望解答,谢谢!

Yong Wu

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