refactor: reorganize examples and fix PHPStan baseline

- Move cached discovery example from examples/10 to examples/09
- Update composer.json autoload-dev namespace mapping
- Fix PHPStan baseline by removing invalid entries for non-existent files
- Update server.php to follow proper example pattern with logging and lifecycle

Author: xentixar

composer.json

@@ -59,8 +59,7 @@
       "Mcp\\Example\\DependenciesStdioExample\\": "examples/06-custom-dependencies-stdio/",
       "Mcp\\Example\\ComplexSchemaHttpExample\\": "examples/07-complex-tool-schema-http/",
       "Mcp\\Example\\SchemaShowcaseExample\\": "examples/08-schema-showcase-streamable/",
-      "Mcp\\Example\\HttpTransportExample\\": "examples/10-simple-http-transport/",
-      "Mcp\\Example\\CachedDiscoveryExample\\": "examples/10-cached-discovery-stdio/",
+      "Mcp\\Example\\CachedDiscoveryExample\\": "examples/09-cached-discovery-stdio/",
       "Mcp\\Tests\\": "tests/"
     }
   },

examples/10-cached-discovery-stdio/CachedCalculatorElements.php renamed to examples/09-cached-discovery-stdio/CachedCalculatorElements.php

@@ -12,17 +12,28 @@
  * file that was distributed with this source code.
  */
 
-require_once __DIR__.'/../bootstrap.php';
+require_once dirname(__DIR__) . '/bootstrap.php';
+chdir(__DIR__);
 
 use Mcp\Server;
 use Mcp\Server\Transport\StdioTransport;
 use Symfony\Component\Cache\Adapter\ArrayAdapter;
 use Symfony\Component\Cache\Psr16Cache;
 
-Server::make()
+logger()->info('Starting MCP Cached Discovery Calculator Server...');
+
+$server = Server::make()
     ->setServerInfo('Cached Discovery Calculator', '1.0.0', 'Calculator with cached discovery for better performance.')
-    ->setDiscovery(__DIR__, ['.'])
+    ->setContainer(container())
     ->setLogger(logger())
+    ->setDiscovery(__DIR__, ['.'])
     ->setCache(new Psr16Cache(new ArrayAdapter()))
-    ->build()
-    ->connect(new StdioTransport());
+    ->build();
+
+$transport = new StdioTransport(logger: logger());
+
+$server->connect($transport);
+
+$transport->listen();
+
+logger()->info('Server listener stopped gracefully.');

examples/10-cached-discovery-stdio/server.php renamed to examples/09-cached-discovery-stdio/server.php

@@ -321,35 +321,7 @@ parameters:
 			count: 1
 			path: examples/08-schema-showcase-streamable/SchemaShowcaseElements.php
 
-		-
-			message: '#^Instantiated class Mcp\\Server\\Transports\\StreamableHttpServerTransport not found\.$#'
-			identifier: class.notFound
-			count: 1
-			path: examples/08-schema-showcase-streamable/server.php
-
-		-
-			message: '#^Parameter \#1 \$transport of method Mcp\\Server\:\:connect\(\) expects Mcp\\Server\\TransportInterface, Mcp\\Server\\Transports\\StreamableHttpServerTransport given\.$#'
-			identifier: argument.type
-			count: 1
-			path: examples/08-schema-showcase-streamable/server.php
-
-		-
-			message: '#^Parameter \#1 \$registry of class Mcp\\Server\\RequestHandler\\ListPromptsHandler constructor expects Mcp\\Capability\\Registry\\ReferenceProviderInterface, Mcp\\Capability\\PromptChain given\.$#'
-			identifier: argument.type
-			count: 1
-			path: examples/09-standalone-cli/src/Builder.php
 
-		-
-			message: '#^Parameter \#1 \$registry of class Mcp\\Server\\RequestHandler\\ListResourcesHandler constructor expects Mcp\\Capability\\Registry\\ReferenceProviderInterface, Mcp\\Capability\\ResourceChain given\.$#'
-			identifier: argument.type
-			count: 1
-			path: examples/09-standalone-cli/src/Builder.php
-
-		-
-			message: '#^Parameter \#1 \$registry of class Mcp\\Server\\RequestHandler\\ListToolsHandler constructor expects Mcp\\Capability\\Registry\\ReferenceProviderInterface, Mcp\\Capability\\ToolChain given\.$#'
-			identifier: argument.type
-			count: 1
-			path: examples/09-standalone-cli/src/Builder.php
 
 		-
 			message: '#^Call to an undefined method Mcp\\Capability\\Registry\\ResourceTemplateReference\:\:handle\(\)\.$#'