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build: Rename to graviton for now
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+5
-4
lines changed

3 files changed

+5
-4
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.github/workflows/cloud_tests_full.yml

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@@ -32,7 +32,7 @@ jobs:
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workdir: "${{ secrets.TOWER_BUCKET_AWS }}/work/rnaseq/work-${{ github.sha }}"
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run_name: "aws_rnaseq_full_${{ matrix.aligner }}_${{ matrix.arch }}"
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revision: ${{ github.sha }}
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profiles: test_full_aws${{ matrix.arch == 'arm64' && ',wave,arm' || '' }}
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profiles: test_full_aws${{ matrix.arch == 'arm64' && ',wave,graviton' || '' }}
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parameters: |
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{
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"hook_url": "${{ secrets.MEGATESTS_ALERTS_SLACK_HOOK_URL }}",

.github/workflows/cloud_tests_small.yml

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@@ -30,7 +30,7 @@ jobs:
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workdir: "${{ secrets.TOWER_BUCKET_AWS }}/work/rnaseq/work-${{ github.sha }}"
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run_name: "aws_rnaseq_small_${{ matrix.arch }}"
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revision: ${{ github.sha }}
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profiles: test${{ matrix.arch == 'arm64' && ',wave,arm' || '' }}
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profiles: test${{ matrix.arch == 'arm64' && ',wave,graviton' || '' }}
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parameters: |
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{
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"outdir": "${{ secrets.TOWER_BUCKET_AWS }}/rnaseq/results-test-${{ github.sha }}/${{ matrix.arch }}/aligner_${{ matrix.aligner }}/"

nextflow.config

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@@ -191,10 +191,11 @@ profiles {
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apptainer.enabled = false
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docker.runOptions = '-u $(id -u):$(id -g)'
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}
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apple {
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arm {
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docker.runOptions = '-u $(id -u):$(id -g) --platform=linux/amd64'
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}
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arm {
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// TODO PR this to tools
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graviton {
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process.arch = 'linux/arm64'
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}
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singularity {

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