Merge pull request #11 from effigies/ci/package

MNT: Prepare for 0.0.1 release

Author: effigies

.github/workflows/pythonpackage.yml

@@ -14,7 +14,7 @@ on:
     branches: [ master ]
 
 jobs:
-  build:
+  test:
     runs-on: ubuntu-latest
     strategy:
       matrix:
@@ -46,3 +46,35 @@ jobs:
       run: |
         source /etc/fsl/fsl.sh
         pytest -sv --doctest-modules pydra/tasks/$SUBPACKAGE
+
+  deploy:
+    needs: test
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: [3.9]
+    steps:
+    - uses: actions/checkout@v2
+      with:
+        submodules: recursive
+        fetch-depth: 0
+    - name: Set up Python ${{ matrix.python-version }}
+      uses: actions/setup-python@v2
+      with:
+        python-version: ${{ matrix.python-version }}
+    - name: Install build tools
+      run: python -m pip install --upgrade pip setuptools wheel twine
+    - name: Build source and wheel distributions
+      run: python setup.py sdist bdist_wheel
+    - name: Check distributions
+      run: twine check dist/*
+    - uses: actions/upload-artifact@v2
+      with:
+        name: distributions
+        path: dist/
+    - name: Upload to PyPI (on tags)
+      if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags')
+      uses: pypa/gh-action-pypi-publish@master
+      with:
+        user: __token__
+        password: ${{ secrets.PYPI_API_TOKEN }}

README.md

@@ -1,3 +1,30 @@
+# Nipype 1 Tasks for Pydra
+
+[Pydra](https://nipype.github.io/pydra/) is a redesign of the Nipype dataflow
+engine, and the core of the emerging
+[Nipype 2 ecosystem](https://github.com/nipype).
+
+This is a task package, a set of Pydra Tasks that inhabits the
+`pydra.tasks.*` namespace, to ease wrapping Nipype 1 Interfaces.
+
+Additional tools for migrating from Nipype 1 to Pydra may find their home here.
+
+## Installation
+
+```
+pip install pydra-nipype1
+```
+
+## Usage
+
+```
+from pydra.tasks.nipype1.utils import Nipype1Task
+from nipype.interfaces import fsl
+
+thresh = Nipype1Task(fsl.Threshold())
+res = thresh(in_file=fname, thresh=0.5)
+```
+
 ## For developers
 
 Install repo in developer mode from the source directory. It is also useful to

setup.cfg

@@ -5,14 +5,32 @@ subpackage = nipype1
 author = Chris Markiewicz
 author_email = markiewicz@stanford.edu
 description = Tools for importing nipype 1.x interfaces into Pydra
+long_description = file:README.md
+long_description_content_type = text/markdown; variant=CommonMark
+license = Apache License, 2.0
+classifiers =
+    Development Status :: 4 - Beta
+    Environment :: Console
+    Intended Audience :: Science/Research
+    License :: OSI Approved :: Apache Software License
+    Operating System :: MacOS :: MacOS X
+    Operating System :: POSIX :: Linux
+    Programming Language :: Python :: 3.7
+    Programming Language :: Python :: 3.8
+    Programming Language :: Python :: 3.9
+    Topic :: Scientific/Engineering
 
 [options]
 python_requires = >=3.7
 install_requires =
     pydra >= 0.6.2
     nipype
+packages = find_namespace:
 
-packages = pydra.tasks.%(subpackage)s
+[options.packages.find]
+include =
+    pydra.tasks.%(subpackage)s
+    pydra.tasks.%(subpackage)s.*
 
 [options.extras_require]
 doc =