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An issue with Transformer models is the quadratic computing bottleneck. Perciever models aim to address this issue by combining and alternating the transformer attention mechanism with a cross attention module. This creates an array in the model which is of a signifigantly lower size than the array in alternative models. Another advantage of Perciever models is that they can be used on varying types of data (audio, video, spatial positioning, text and images), although this particular model deals only with images. + +Helpful Diagram from Deepmind Paper +![Diagram](modeldiagram.PNG) + +### Positional Encoding +Positional encoding lets the data array preserve the positional structure. The original deepmind paper uses fourier features which appears to be a more ideal solution that produces better results. However due to complexity of implementation and a lack of math knowledge, patches were used instead. Patches are regions of each image where positioning is retained. + +## Data +The data was already pre-processed kindly by the Course Staff. Images were input with a label of 1 (Alzheimers) or 0 (no Alzheimers). +A limited amount of the data (800 training and 200 test) was used with a 80:20 split of train:test data. It may be the case that images adjacent to the other may be the same patients. However random selection was not used which may be a cause for the low accuracy of my model, but the high accuracy on the predict.py. + +### Example Input +An Alzheimers positve brain scan +![Brain_Scan](ex_brain.jpeg) + +## Usage +There are 4 files +dataset.py - processes data +modules.py - stores model +train.py - run to run the model (ensure tensorflow_addons installed) +predict.py - run to test accuracy on test data + +## Dependencies +tensorflow +tensorflow_addons +numpy +matplotlib + +## Results + +It had a final accuracy of 58.0% which is well below the required 80% though it sometimes reach 65% accuracy. +![Results](60epoch_plot.png) + +However when used to predict on 10 positve test data it was 100% accurate. +![Predict](predict.PNG) \ No newline at end of file diff --git a/recognition/46376066_ADNI/dataset.py b/recognition/46376066_ADNI/dataset.py new file mode 100644 index 0000000000..b39b247915 --- /dev/null +++ b/recognition/46376066_ADNI/dataset.py @@ -0,0 +1,73 @@ +import os + +import tensorflow as tf +import numpy as np + +from tensorflow.keras.preprocessing.image import load_img, img_to_array + +import random as rd + +# Used to process images into usable data for model +def process_image(dir): + AD_train_images = os.listdir(dir + "/train/AD") + NC_train_images = os.listdir(dir + "/train/NC") + + AD_test_images = os.listdir(dir + "/test/AD") + NC_test_images = os.listdir(dir + "/test/NC") + + #image_size = (240, 256, 3) + + #Train Data + train_both = [] + + for image_name in AD_train_images[:400]: + image = load_img(dir + "/train/AD/" + image_name, target_size = (128, 128, 3)) + image = img_to_array(image) + train_both.append([image,1]) + + for image_name in NC_train_images[:400]: + image = load_img(dir + "/train/NC/" + image_name, target_size = (128, 128, 3)) + image = img_to_array(image) + train_both.append([image,0]) + + rd.shuffle(train_both) + + train_images = [] + train_labels = [] + + for x in train_both: + train_images.append(x[0]) + train_labels.append(x[1]) + + x_train = tf.convert_to_tensor(np.array(train_images, dtype=np.uint8)) + x_train = tf.cast(x_train, tf.float16) / 255.0 + y_train = tf.convert_to_tensor(train_labels) + + # Test Data + test_both = [] + + for image_name in AD_test_images[:100]: + image = load_img(dir + "/test/AD/" + image_name, target_size = (128, 128, 3)) + image = img_to_array(image) + test_both.append([image,1]) + + for image_name in NC_test_images[:100]: + image = load_img(dir + "/test/NC/" + image_name, target_size = (128, 128, 3)) + image = img_to_array(image) + test_both.append([image,0]) + + rd.shuffle(test_both) + + test_images = [] + test_labels = [] + + for x in test_both: + test_images.append(x[0]) + test_labels.append(x[1]) + + x_test = tf.convert_to_tensor(np.array(test_images, dtype=np.uint8)) + x_test = tf.cast(x_test, tf.float16) / 255.0 + y_test = tf.convert_to_tensor(test_labels) + + + return x_train, y_train, x_test, y_test \ No newline at end of file diff --git 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zD^46H4>KYY6Wsc7*i_~n|7Jp$qUy!d^pa1>u(Cmv{K`jUX(Prt7Aewu+F;2tXO^(IhB=^u7Nxz|R9bBlypw{Z5uQ$v0DlxRb zzLrPWef^m|5KY=q7`=5Bl i{XZ>FQ>(7t+EW%UsSq&J`1;QWv$C+cRAqkq$^Qar{F4d* literal 0 HcmV?d00001 diff --git a/recognition/46376066_ADNI/predict.py b/recognition/46376066_ADNI/predict.py new file mode 100644 index 0000000000..ef1a8afc07 --- /dev/null +++ b/recognition/46376066_ADNI/predict.py @@ -0,0 +1,46 @@ +import os +import tensorflow as tf +import numpy as np + +from tensorflow import keras + +from dataset import * +from modules import * +from train import * + +from tensorflow.keras.preprocessing.image import load_img, img_to_array + +REQ_DIR = "../content/drive/MyDrive/Colab Notebooks/Report/AD_NC" + +def get_test_data(dir): + AD_test_images = os.listdir(dir + "/test/AD") + + test_both = [] + + for image_name in AD_test_images[:20]: + image = load_img(dir + "/test/AD/" + image_name, target_size = (128, 128, 3)) + image = img_to_array(image) + test_both.append([image,1]) + + test_images = [] + test_labels = [] + + for x in test_both: + test_images.append(x[0]) + test_labels.append(x[1]) + + x_test = tf.convert_to_tensor(np.array(test_images, dtype=np.uint8)) + x_test = tf.cast(x_test, tf.float16) / 255.0 + y_test = tf.convert_to_tensor(test_labels) + + return x_test, y_test + +def main(): + new_model = tf.keras.models.load_model('complete_model') + x_test, y_test = get_test_data(REQ_DIR) + loss, acc = new_model.evaluate(x_test, y_test, verbose=2) + print(f"Test accuracy: {round(acc * 100, 2)}%") + + +if __name__ == "__main__": + main() \ No newline at end of file diff --git a/recognition/46376066_ADNI/train.py b/recognition/46376066_ADNI/train.py new file mode 100644 index 0000000000..8a7fb631fb --- /dev/null +++ b/recognition/46376066_ADNI/train.py @@ -0,0 +1,102 @@ +from dataset import * +from modules import * + +import tensorflow_addons as tfa +import matplotlib.pyplot as plt + +num_classes = 2 +#input_shape = (128, 128, 3) +batch_size = 16 +epochs = 60 +learning_rate = 0.001 +weight_decay = 0.0001 + +patch_size = 2 +patch_count = (128 // patch_size) ** 2 +proj_dims = 256 +latent_dims = 256 +forward_units = [ + proj_dims, + proj_dims +] +head_count = 8 +num_t_blocks = 4 +dropout_rate = 0.2 +num_iters = 2 +classifier_units = [ + proj_dims, + num_classes, +] + +REQ_DIR = "../content/drive/MyDrive/Colab Notebooks/Report/AD_NC" + +def run_model(model): + + x_train, y_train, x_test, y_test = process_image(REQ_DIR) + + optimizer = tfa.optimizers.LAMB( + learning_rate=learning_rate, weight_decay_rate=weight_decay, + ) + + model.compile( + optimizer=optimizer, + loss=keras.losses.SparseCategoricalCrossentropy(from_logits=True), + metrics=[ + keras.metrics.SparseCategoricalAccuracy(name="acc"), + ], + ) + + # reduce learning rates as model progresses + reduce_lr = keras.callbacks.ReduceLROnPlateau( + monitor="val_loss", factor=0.2, patience=3 + ) + + # fit the model + history = model.fit( + x=x_train, + y=y_train, + validation_data=(x_test, y_test), + batch_size=batch_size, + epochs=epochs, + callbacks=[reduce_lr] + ) + + _, accuracy = model.evaluate(x_test, y_test) + print(f"Test accuracy: {round(accuracy * 100, 2)}%") + + model.save('complete_model') + + return history + + + + +def main(): + + perceiver_classifier = Perceiver( + patch_size, + patch_count, + latent_dims, + proj_dims, + head_count, + num_t_blocks, + forward_units, + dropout_rate, + num_iters, + classifier_units + ) + + history = run_model(perceiver_classifier) + + + # plot results + plt.plot(history.history['acc']) + plt.plot(history.history['val_acc']) + plt.title('model accuracy') + plt.ylabel('accuracy') + plt.xlabel('epoch') + plt.legend(['train', 'test'], loc='upper left') + plt.savefig('my_plot.png') + +if __name__ == "__main__": + main() \ No newline at end of file From 04854c77f324c691da61844d2d58028753526cb5 Mon Sep 17 00:00:00 2001 From: parker334 <88067431+parker334@users.noreply.github.com> Date: Sat, 22 Oct 2022 22:58:42 +1000 Subject: [PATCH 2/2] GitError - Read README --- recognition/46376066_ADNI/README.md | 9 + .../46376066_ADNI/original_git_log.txt | 37708 ++++++++++++++++ 2 files changed, 37717 insertions(+) create mode 100644 recognition/46376066_ADNI/original_git_log.txt diff --git a/recognition/46376066_ADNI/README.md b/recognition/46376066_ADNI/README.md index a6236cf4ab..afa9b01253 100644 --- a/recognition/46376066_ADNI/README.md +++ b/recognition/46376066_ADNI/README.md @@ -1,3 +1,12 @@ +### NOTE ON LATE PULL REQUEST AND MISSING COMMITS +Due to me not knowing of the git file size limit, most of my commits included the zip files which are too large. Attempts were made over the enitirety of Saturday at editing the commits to remove the file using various online tools, however none proved successful. + +Due to this I have committed (the one before this commit) the files as they were on 11:56 on Friday Night, and I can show in person this is the case. + +I have also included my log history in the text file named original_git_log.txt, this may not be suffiecient evidence but I hope it will be. + +If any further evidence is required please email me. + # Perceiver Model implementation for Classification of ADNI Alzheimer's Data ### Author: William Parker ### Student Number: s4637606 diff --git a/recognition/46376066_ADNI/original_git_log.txt b/recognition/46376066_ADNI/original_git_log.txt new file mode 100644 index 0000000000..b1e03e3851 --- /dev/null +++ b/recognition/46376066_ADNI/original_git_log.txt @@ -0,0 +1,37708 @@ +commit 98c242b91e39d99a353ddd10b202a8e6bafccc68 +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 23:56:51 2022 +1000 + + gitIgnore + +commit aea86f377fe70e89ed7c470deebcea3496862228 +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 23:54:43 2022 +1000 + + Added Diagram + +commit dafc17708da08302a876adc92fed292139a49f91 +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 23:51:32 2022 +1000 + + More complete documentation, submitable + +commit 649c05b2ce4a8206591f1ffae98a820029df67df +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 23:15:45 2022 +1000 + + Documentation added (incomplete) + +commit feaf2aaf8554ca9179a87b6112e10e651b6185cb +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 23:12:05 2022 +1000 + + Generalised Directories + +commit 6465fa0485450c49e17adc5fce2e81fecf648251 +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 22:44:39 2022 +1000 + + Working Version + +commit 8f61d07bb54cda7f7d9933f2330cbb587637fe26 +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 22:13:09 2022 +1000 + + added saving plots and models and predict + +commit 49057896b7f92de846f666109cefefad906a34b9 +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 21:36:16 2022 +1000 + + Bug fixing, ploting and slight changes + +commit 7bae2e09c48e0a8be60b0d523513d31c4f437263 +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 19:59:59 2022 +1000 + + Implemented training and testing script + +commit 7dcc29c22f080476d9ccb975245fe9c849299d91 +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 18:37:01 2022 +1000 + + Made function to process and label data + +commit 8cc1d7d317812807b4af9a951b6ba9257f3c46dd +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 16:55:22 2022 +1000 + + Added Perciever call + +commit 7e7bc6a64ec74f06e8d4c6bcf3a0542baa96a3ad +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 13:46:02 2022 +1000 + + Implemented perceiver model creation + +commit 6e66829e63af3f59a67087d3ed8390b4a240a3ad +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 13:31:53 2022 +1000 + + Perciever Model initilisation + +commit 52b30e555b614823e76672c1a20dd96a8f7fde8f +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 13:26:30 2022 +1000 + + Made Transformer module + +commit aabd976c03795bc5df4810dafc0532a9b9749582 +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 13:18:51 2022 +1000 + + Created cross-attention module and forward network + +commit 747c4ccb17e666905c75ab7853291dcf6169fdc3 +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Fri Oct 21 00:55:48 2022 +1000 + + Implemented Patch Creation layer + +commit 983e087ab64440f5ea8c3d95842af119f8eaa867 +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Thu Oct 20 23:24:54 2022 +1000 + + Implemented patch encoder + +commit 59b7643849928e1cfee475eef40daacf28d28ec6 +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Tue Oct 18 15:35:04 2022 +1000 + + Added Data Zip File + +commit 3d3f342d439fe1afe1c19b27eb505db0c373a0c4 +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Sun Oct 16 01:43:19 2022 +1000 + + Early planning of Model based off given paper + +commit 97c0374dd82877f78e486fb2c7412ced27085285 +Author: parker334 <88067431+parker334@users.noreply.github.com> +Date: Sun Oct 16 00:46:16 2022 +1000 + + Created personal folder and initial empty files + +commit bf86e8cf8cb1fc4f17eebe57b98f4fc6828a44bf +Merge: 243dc464 646ef949 +Author: Shakes +Date: Wed Nov 24 08:42:03 2021 +1000 + + Merge pull request #215 from Pentaflouride/topic-recognition + + Topic recognition GCN 45249435 + +commit 243dc464dc475af3945d195a71a1facd4bcb7600 +Merge: 209a6069 62e81512 +Author: Shakes +Date: Wed Nov 24 08:39:24 2021 +1000 + + Merge pull request #338 from wildanazz/topic-recognition + + 45616756 - GCN on Facebook dataset + +commit 209a606926fcf3222db918db76c8586c6ce1c636 +Merge: 15666bd7 9b996a60 +Author: Shakes +Date: Wed Nov 24 08:37:00 2021 +1000 + + Merge pull request #310 from shunyuLiu/topic-recognition + + s4571084 GCN model + +commit 646ef949c33489e46f2ae6f2a0e6060987e16546 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Nov 24 08:04:11 2021 +1000 + + delete + +commit 15666bd749d3e9e63d93ec5510e5fe662427e4f8 +Merge: 018b724f 67a22a22 +Author: Shakes +Date: Wed Nov 24 08:02:05 2021 +1000 + + Merge pull request #296 from JoshuaSYX/topic-recognition + + Image Segmentation ISIC Melanoma Dataset + +commit 063141fb681977a03aaf3b735ba4f0a1afb702bc +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Tue Nov 23 13:28:17 2021 +1000 + + Added block description + +commit feefbd6622ac1907efe3a59a063e542f0cb7b107 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Tue Nov 23 13:18:04 2021 +1000 + + Delete data files + +commit b5877da1a7db8be3d226db6b3ec9ec5b9a782321 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Tue Nov 23 13:17:42 2021 +1000 + + Delete data files + +commit 434aee36e903d579131ed279768f8c7ab0011ea1 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Tue Nov 23 13:17:16 2021 +1000 + + Delete data files + +commit dd712886edc4104ad097110459cd4cafb84e2d06 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Tue Nov 23 13:17:00 2021 +1000 + + Delete data files + +commit 67a22a22ac46d1b3d16984676e4ff6d227111813 +Author: Joshua +Date: Tue Nov 23 12:06:17 2021 +1000 + + Added Values for Dice Coefficient as requested by Feedback + +commit 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Update README.md, update file descriptions. + +commit efd9bb923c8112597d819e02a3f4a54348523da7 +Author: 克勞德 +Date: Mon Nov 22 15:25:18 2021 +1000 + + Removed Imporoved_Unet.h5, the model file. + +commit c2c657ad91d786ca50662d0f36e2f478bb8c83b0 +Author: Djamahl +Date: Mon Nov 22 15:15:05 2021 +1000 + + response to feedback, fix comments, remove .txt, .csv, .png, .h5 add examples and architecture to Readme and update + +commit 371bb623680f3f717a5a6950cba2f96a1cf59481 +Merge: fd5558e3 d3ba5e11 +Author: Shakes +Date: Mon Nov 22 14:49:18 2021 +1000 + + Merge pull request #351 from mparker2103/topic-recognition + + Topic recognition Unet + +commit fd5558e3fe4ba679af2b747a379d03cab40d1fbb +Merge: 8e1176be 85f478eb +Author: Shakes +Date: Mon Nov 22 14:44:37 2021 +1000 + + Merge pull request #350 from tsyyyyyyy/topic-recognition + + Topic recognition VQ-VAE + +commit 8e1176be4d046f844c9a527cf7fb29a33bf42820 +Merge: f20bbfb2 3fc5f021 +Author: Shakes +Date: Mon Nov 22 14:31:28 2021 +1000 + + 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Shakes +Date: Mon Nov 22 14:21:09 2021 +1000 + + Merge pull request #345 from qiansen1386/topic-recognition + + Lesion detection with YOLOX + +commit a50de9823aee13b71403f0447338ca02a7a90e80 +Merge: 78b8ed7b 40c7c20a +Author: Shakes +Date: Mon Nov 22 14:18:19 2021 +1000 + + Merge pull request #343 from csngJason/topic-recognition + + Topic recognition pull request UNet + +commit 78b8ed7b5cdd93e5a9f34a57f11a4de322ed5dd6 +Merge: 868e306c 402463fe +Author: Shakes +Date: Mon Nov 22 14:15:02 2021 +1000 + + Merge pull request #342 from Kirbologist/topic-recognition + + Topic recognition UNet + +commit 868e306caf4290ebdd975330d9ff9887300c0eb2 +Merge: 5f207f08 e6ed872c +Author: Shakes +Date: Mon Nov 22 14:11:33 2021 +1000 + + Merge pull request #341 from s4581614/topic-recognition + + CSIRO 3D Prostate UNET Application + +commit 5f207f085b9fe80e0024e75caa19d5594871ad60 +Merge: e8c57521 f994e009 +Author: Shakes +Date: Mon Nov 22 13:55:51 2021 +1000 + + Merge pull request #339 from fzmi/topic-recognition + + s4513350 - Improved U-Net Model for ISIC Dataset + +commit e8c575211a4cdaa1852d536f358190018fa4c99c +Merge: 0c800b8a 7c6b2e04 +Author: Shakes +Date: Mon Nov 22 13:47:31 2021 +1000 + + Merge pull request #337 from white-segfault/topic-recognition + + s4582413 comp3710 report + +commit 0c800b8a2c916106320ad60f8fe1dd746d752157 +Merge: bd492b0b 31db2579 +Author: Shakes +Date: Mon Nov 22 13:46:07 2021 +1000 + + Merge pull request #336 from tmo/topic-recognition + + s4434829 - VQVAE model for generating brain MRI images from the OASIS brain dataset + +commit 74156c42fd07143eee5de7f3e479285f097b228a +Merge: b31bf562 bd492b0b +Author: JoshuaSYX <88566170+JoshuaSYX@users.noreply.github.com> +Date: Mon Nov 22 13:13:26 2021 +1000 + + Merge branch 'shakes76:topic-recognition' into topic-recognition + +commit bd492b0bed37b4d308010140457fcbb954d2c98a +Merge: 4314739d 05b42b8b +Author: Shakes +Date: Mon Nov 22 13:07:54 2021 +1000 + + Merge pull request #335 from JoeHolownia/topic-recognition + + s4433723 AKOA Perceiver Transformer + +commit 4314739d91bbda5b3bf0c9f0d98aaa281e349932 +Merge: 6bb6382a a6e10874 +Author: Shakes +Date: Mon Nov 22 13:06:22 2021 +1000 + + Merge pull request #334 from CarrickC/topic-recognition + + 45678044 - Generative model of the OASIS Brain dataset using VQ-VAE + +commit 6bb6382ae95b0c9cf2f77bbe2938a7703d69bcb6 +Merge: 112349a0 ec6e25cf +Author: Shakes +Date: Mon Nov 22 13:04:50 2021 +1000 + + Merge pull request #333 from kamen21/topic-recognition + + Topic recognition StyleGAN + +commit b31bf562a2723d56988eef91fb23ebad5439743d +Merge: e5b4d2cd 112349a0 +Author: JoshuaSYX <88566170+JoshuaSYX@users.noreply.github.com> +Date: Mon Nov 22 13:01:53 2021 +1000 + + Merge branch 'shakes76:topic-recognition' into topic-recognition + +commit 112349a06d5b1e197184a72632bd438f5fd00b6b +Merge: bb1ec046 1492b115 +Author: Shakes +Date: Mon Nov 22 13:01:17 2021 +1000 + + Merge pull request #332 from malice08/topic-recognition + + 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+Date: Mon Nov 22 12:17:03 2021 +1000 + + Merge pull request #324 from borova-siska/topic-recognition + + 3D UNet for Pelvis Dataset + +commit dec0239b6bff1d65aa17e1eb1eff350d23c4de9a +Merge: c364ad63 441c8c42 +Author: Shakes +Date: Mon Nov 22 12:14:52 2021 +1000 + + Merge pull request #323 from zaragolshani/topic-recognition + + Topic recognition YOLO + +commit 05b42b8b1176ff54e16b308856de35a48a233d61 +Merge: c6c6058b 00dea2cd +Author: JoeHolownia +Date: Mon Nov 22 12:12:05 2021 +1000 + + Merge remote-tracking branch 'origin/topic-recognition' into topic-recognition + +commit c364ad633c57abaff322cb8042b43fed6b2cc2b9 +Merge: 959ca00f acf53473 +Author: Shakes +Date: Mon Nov 22 12:09:53 2021 +1000 + + Merge pull request #322 from wahsnitram/topic-recognition + + s4581883 Improved UNet + +commit dd2a2bc84edb5c0d0c01a82eb23181ba7f2d0a99 +Author: RobEldo <43310214+RobEldo@users.noreply.github.com> +Date: Mon Nov 22 12:06:45 2021 +1000 + + Removed Model Files + + As per Shakes74 Patternflow merging requirements, the pre-trained model files have been removed. + +commit 959ca00f5345e5864d2824471bb6e414bb634784 +Merge: 40ba7554 5f8cf57f +Author: Shakes +Date: Mon Nov 22 12:06:37 2021 +1000 + + Merge pull request #321 from eliasxue/topic-recognition + + Topic recognition GCN + +commit 40ba7554614b920401166a4df8a38ab82b7f12fc +Merge: 3c9b8b66 504b715e +Author: Shakes +Date: Mon Nov 22 11:59:44 2021 +1000 + + Merge pull request #320 from daniel-o-jones/topic-recognition + + Topic recognition + +commit 206ecb4b397e9fcd55c72c1fb5a8734dfc48d9f7 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:29:10 2021 +1000 + + Delete Models-checkpoint.ipynb + +commit 0038e0e87170690529a84b775068ca6f31638644 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:29:07 2021 +1000 + + Delete train_stylegan-checkpoint.ipynb + +commit 34718de81aed22c74813116eeaf626790ac6bcaf +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:29:05 2021 +1000 + + Delete Dataset.cpython-38.pyc + +commit 264f1bf729a187d8147fd4100236e247517a3314 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:29:01 2021 +1000 + + Delete Model1.cpython-38.pyc + +commit fa3802a184ed52634f23bdc16decde48a10b1183 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:28:59 2021 +1000 + + Delete Model1.cpython-39.pyc + +commit c71e43512b740a8f5ec5dd241794aae39d2bc074 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:28:57 2021 +1000 + + Delete Model2.cpython-38.pyc + +commit 9e067d01ded965fc4a5e4dad391b014ab50949e9 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:28:54 2021 +1000 + + Delete Model2.cpython-39.pyc + +commit ca36b40ebe7c1d571a4bbdda6ea80c0c5965c001 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:28:51 2021 +1000 + + Delete train_stylegan_new.ipynb + +commit 228c1e0e06dd53dbe56221f2373803a2ce43e018 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:20:22 2021 +1000 + + Create Model2.cpython-39.pyc + +commit 393d9f3b6e07c98019005f4ac7eded702de2e8b7 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:20:20 2021 +1000 + + Create Model2.cpython-38.pyc + +commit 4344824976863a6037fad2650166f9e8008947d6 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:20:18 2021 +1000 + + Create Model1.cpython-39.pyc + +commit 5bb598856ab299d15578ba46ee2b53bc9f99a21c +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:20:15 2021 +1000 + + Create Model1.cpython-38.pyc + +commit a9a7830660de6807a13a04b2b73518644275678d +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:20:12 2021 +1000 + + Create Dataset.cpython-38.pyc + +commit ffb35155823a5b561d39c898508c022535478609 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:20:09 2021 +1000 + + Create train_stylegan-checkpoint.ipynb + +commit f91d5e3762f6cdf3381389f501a389cf0165bb4f +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:18:30 2021 +1000 + + Create Models-checkpoint.ipynb + +commit f24e7db7329e277eaf764519d4605010a897d0db +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Mon Nov 22 11:13:25 2021 +1000 + + Delete net_paras2.pth + + as required in Feedback email + +commit 2b497a1967db5db9cd134cc596d439b0a1ccaf49 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 22 11:04:13 2021 +1000 + + Delete .gitignore + +commit 3c9b8b66867750ac8a3f3b90f0166a91f7d8100d +Merge: 50367dc0 49069420 +Author: Shakes +Date: Mon Nov 22 10:52:09 2021 +1000 + + Merge pull request #319 from aryaman4152/topic-recognition + + 46066853 VQ-VAE based generator + +commit 50367dc0298657011a7c4882f8de7814f7e0300e +Merge: 9a6c3063 0a45ea7d +Author: Shakes +Date: Mon Nov 22 10:47:54 2021 +1000 + + Merge pull request #318 from kd9911/topic-recognition + + s46307266 Improved Unet Pull Request + +commit e7f296732d750235dde121c31382173c5f80bb2b +Author: shunyuLiu <92986224+shunyuLiu@users.noreply.github.com> +Date: Mon Nov 22 10:41:54 2021 +1000 + + Delete model.py + + Remove model.py to avoid clog up the repository + +commit 9a6c3063ce71ba86bf8fa24c4f7c5fc2da1f9601 +Merge: 4ac67e3a dc529ec3 +Author: Shakes +Date: Mon Nov 22 10:38:40 2021 +1000 + + Merge pull request #316 from avi2413/topic-recognition + + Topic recognition StyleGAN + +commit 4ac67e3a58369559bac4e783eb10690fe8b03156 +Merge: 2b6532db 7e6a723f +Author: Shakes +Date: Mon Nov 22 10:35:38 2021 +1000 + + Merge pull request #315 from xiaofangC/topic-recognition + + Topic recognition + +commit 2b6532dbced998a3998de6c11a44cf8b09af3df9 +Merge: f236073d 43df8945 +Author: Shakes +Date: Mon Nov 22 10:30:57 2021 +1000 + + Merge pull request #313 from essiezze/topic-recognition + + COMP 3710 Report submission 45471861 + +commit c6c6058b39ca946f7290b2ee8eac7cb07f44ed90 +Author: JoeHolownia +Date: Mon Nov 22 10:22:32 2021 +1000 + + Response to feedback, moved images into seperate directory. Removed plt.show() for algorithm run. + +commit f236073d4c7229f0630111664b2eccae308d806f +Merge: f96f4ee1 a6d61957 +Author: Shakes +Date: Mon Nov 22 09:48:37 2021 +1000 + + Merge pull request #307 from Ahmed-HB/topic-recognition + + s4589325 OAI AKOA Perceiver + +commit f96f4ee112fde0b77916de3866a1eaa57b3056ef +Merge: dfe98a73 cd215e7b +Author: Shakes +Date: Mon Nov 22 09:40:30 2021 +1000 + + Merge pull request #304 from leejyang00/topic-recognition + + 45731462: Segmenting the ISICs dataset with the Improved UNet + +commit dfe98a731fc6a3d16b852531a91be7782aa506be +Merge: fc48778b f2c113c7 +Author: Shakes +Date: Mon Nov 22 00:12:10 2021 +1000 + + Merge pull request #303 from joshknowlesuq/topic-recognition + + 45525803: 3D U-Net (Task 4) + +commit fc48778b9d238136f37543fe6a32b86f9bb06761 +Merge: 01ea64a8 4409ddc9 +Author: Shakes +Date: Mon Nov 22 00:04:03 2021 +1000 + + Merge pull request #301 from Lasaj/topic-recognition + + s4012681 UNet3D MRI Segmentation + +commit 01ea64a8b769434e9743d40d57daf5ec7dac2398 +Merge: 4535d08a fc04bd95 +Author: Shakes +Date: Mon Nov 22 00:00:02 2021 +1000 + + Merge pull request #300 from humphreymunn/topic-recognition + + s4583972 Perceiver AKOA knee + +commit 4535d08a65c9477c897a0fa75d2c1b9ecbf41963 +Merge: 2ab3dfb6 845a39d1 +Author: Shakes +Date: Sun Nov 21 23:55:17 2021 +1000 + + Merge pull request #298 from yourcousinbob/topic-recognition + + Generative model of the OASIS brain data set using StyleGAN2 + +commit 2ab3dfb6867cf24a5dd6a09cdfa8e97bc8367372 +Merge: 929bf674 0fa0397f +Author: Shakes +Date: Sun Nov 21 23:53:56 2021 +1000 + + Merge pull request #297 from ChaoticCooties/topic-recognition + + Topic recognition perceiver + +commit 7e6a723f3e39977d51ba8e2c4d1302437c465cd7 +Author: xfchen +Date: Sun Nov 21 21:50:58 2021 +0800 + + add input images + +commit 929bf674502f512c47a43e126a73ae4f09460e4b +Merge: bacffd8d ba5bc1d2 +Author: Shakes +Date: Sun Nov 21 23:46:35 2021 +1000 + + Merge pull request #295 from EugeneY2021/topic-recognition + + s4656406 UNet final one + +commit bacffd8dff0d2f9f1be8412e4341305e82939ed1 +Merge: 190947b9 8fe701a1 +Author: Shakes +Date: Sun Nov 21 23:44:39 2021 +1000 + + Merge pull request #294 from tony-es/topic-recognition + + Topic recognition UNet3D + +commit 190947b9a85c5b9cff7dfabc3fa10e1800d12de0 +Merge: 0558fbb0 9377b80e +Author: Shakes +Date: Sun Nov 21 23:41:57 2021 +1000 + + Merge pull request #290 from hyb19951213/topic-recognition + + Topic recognition + +commit 0558fbb0c3b96ebcc02d284f113b07170a639f0c +Merge: 83c94db4 76d8679b +Author: Shakes +Date: Sun Nov 21 23:39:17 2021 +1000 + + Merge pull request #289 from johnvparsons99/topic-recognition + + 44802020 - Facebook GCN + +commit 83c94db47aed5e613a65949b6c5be46769705524 +Merge: abea9bc2 608fb4cc +Author: Shakes +Date: Sun Nov 21 23:34:26 2021 +1000 + + Merge pull request #287 from kplume/topic-recognition + + 45882999 Improved UNet + +commit abea9bc2d118110bb9ea06603179b9d1971b6e8a +Merge: dc4e3852 0b012c0f +Author: Shakes +Date: Sun Nov 21 23:10:20 2021 +1000 + + Merge pull request #282 from kethomassen/topic-recognition + + 44828374 - OASIS VQVAE + +commit dc4e38525a75854d2acd81d40b3074eea8150e73 +Merge: b11c1905 7f0629b2 +Author: Shakes +Date: Sun Nov 21 23:07:08 2021 +1000 + + Merge pull request #281 from Tompnyx/topic-recognition + + Image Segmentation with an Improved UNet Model - Thomas Petersen - 45872093 + +commit 97622900007e085a8e7f22c32b883968b7c4bec1 +Merge: 08b332a6 b11c1905 +Author: NhatHuyNguyen <42346783+NhatHuyNguyen@users.noreply.github.com> +Date: Sun Nov 21 19:27:47 2021 +0700 + + Merge branch 'topic-recognition' into topic-recognition + +commit b11c190570006ef0f59975d2037e7d3f78b8bf96 +Merge: c5f45c50 0f0b0b8e +Author: Shakes +Date: Sun Nov 21 21:32:33 2021 +1000 + + Merge pull request #277 from Zillwang/topic-recognition + + YoloV3 ISIC lesion detection Ziliang Wang 45236499 + +commit c5f45c5099b825f2feea5a64c9797edfa4d5bbed +Merge: 208e6418 c7ef5fef +Author: Shakes +Date: Sun Nov 21 21:28:37 2021 +1000 + + Merge pull request #275 from cristina1096/topic-recognition + + S4623811 -- StyleGAN2 implement on OASIS dataset + +commit 208e64188a171cff520c65fbad28abb8bc7e23c1 +Merge: ef6f0b41 5d7c7686 +Author: Shakes +Date: Sun Nov 21 21:26:45 2021 +1000 + + Merge pull request #274 from yashtalekar/topic-recognition + + Completed Easy Task Image Segmentation with Improved UNet. + +commit ef6f0b415e1c33de111ce71f2190a56ef7d4783e +Merge: 36fa856b 4a8150be +Author: Shakes +Date: Sun Nov 21 21:24:26 2021 +1000 + + Merge pull request #273 from vniernvhid/topic-recognition + + Topic recognition + +commit 36fa856b94d94ccf09a4938474e4e21973843938 +Merge: 01c3c76a 9251dd6a +Author: Shakes +Date: Sun Nov 21 21:21:59 2021 +1000 + + Merge pull request #272 from MujiDipto/topic-recognition + + Topic recognition - Improved UNet on ISIC data + +commit 01c3c76af3777e190376f3df4b25e95f791ef892 +Merge: 74dae403 cef59676 +Author: Shakes +Date: Sun Nov 21 21:17:07 2021 +1000 + + Merge pull request #269 from mallika-x/topic-recognition + + VQVAE: Generative model of the OASIS Brain + +commit 74dae40306dd6025c8d488976dd80a7aef43f561 +Merge: d19d79e6 e2b0b44f +Author: Shakes +Date: Sun Nov 21 21:15:14 2021 +1000 + + Merge pull request #268 from Erin14/topic-recognition + + 45737455 - Ruiling Chen - Task 1 Improved UNet + +commit d19d79e6497116b342613a31e5960780a76ad56b +Merge: b82cf74a 21ede870 +Author: Shakes +Date: Sun Nov 21 21:13:34 2021 +1000 + + Merge pull request #267 from AndrewLuong6/topic-recognition + + Task 1: Improved UNET on ISICs - 45820188 + +commit b82cf74a66dc25233494baf72a0759cc37f18573 +Merge: bcdd25fd 626e7a6f +Author: Shakes +Date: Sun Nov 21 21:10:45 2021 +1000 + + Merge pull request #266 from tomdx/topic-recognition + + 45801150 - Task 6 Generative VQVAE for OASIS dataset + +commit bcdd25fd8d9dc4015f0b15043e58ffbeb7e18c15 +Merge: 9f9f1d00 58796422 +Author: Shakes +Date: Sun Nov 21 21:09:09 2021 +1000 + + Merge pull request #265 from cherianjohn/topic-recognition + + s4530770 - Improved Unet Implementation + +commit 9f9f1d00f4d77173a6b6899b83a947e331d6b871 +Merge: fa79d420 2ca000cb +Author: Shakes +Date: Sun Nov 21 21:05:38 2021 +1000 + + Merge pull request #264 from rv3392/topic-recognition + + VQ-VAE with the OASIS dataset for image generation + +commit fa79d42068bc2514a06737adb1892a42b8a989c2 +Merge: 1d7b963f 453bfeeb +Author: Shakes +Date: Sun Nov 21 21:04:07 2021 +1000 + + Merge pull request #263 from yousifpatti/topic-recognition + + 45880472 VQ-VAE + +commit 1d7b963fa03f35ea63a5d62a166252908f362098 +Merge: ab896363 d2542ac0 +Author: Shakes +Date: Sun Nov 21 21:01:37 2021 +1000 + + Merge pull request #262 from default-jamc/topic-recognition + + Improved UNet Scoring 0.8 on Test Set + +commit ab89636321493c17e862ba92aade3779debdb956 +Merge: a57b9c2b d3918a65 +Author: Shakes +Date: Sun Nov 21 20:59:28 2021 +1000 + + Merge pull request #261 from lucaslin2020/topic-recognition + + Topic recognition YOLO ISIC 2018 + +commit a57b9c2bda173a980c333163d952d1b383adc558 +Merge: 557e6a87 0b799fc3 +Author: Shakes +Date: Sun Nov 21 20:54:22 2021 +1000 + + Merge pull request #259 from christianburbon/topic-recognition + + Mask R-CNN Christian Burbon - updated + +commit 557e6a87b88d488ad5864aa0cee2560bee6da937 +Merge: bed82b8d 11778d96 +Author: Shakes +Date: Sun Nov 21 20:49:07 2021 +1000 + + Merge pull request #258 from alam218/topic-recognition + + Topic recognition - Improved Unet s4589098 + +commit 1f22a3923cb34cc13cca51fda30b29fa9cbe65ed +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Sun Nov 21 20:20:01 2021 +1000 + + Added Final Comments based on Feedback + +commit bed82b8d2ada904c42f890a745dda48cba252c06 +Merge: e29a0ad2 07ef42d5 +Author: Shakes +Date: Sun Nov 21 19:00:04 2021 +1000 + + Merge pull request #254 from MarkCoulon/topic-recognition + + 45797954 improved UNET + +commit e29a0ad29746220668584ad00237586a07c9ce7a +Merge: 70c50190 c0e2af9b +Author: Shakes +Date: Sun Nov 21 18:50:57 2021 +1000 + + Merge pull request #252 from des-gan09/topic-recognition + + Topic recognition improved unet + +commit 70c5019078cc360083b9c5edb0776681cad29cba +Merge: f25774e8 74d9cb19 +Author: Shakes +Date: Sun Nov 21 18:48:52 2021 +1000 + + Merge pull request #251 from joe86726/topic-recognition + + StyleGAN on OASIS dataset + +commit f25774e8ae061b3d44ff55ec8793398ad89c8a1a +Merge: f4c7dfea 9f20f571 +Author: Shakes +Date: Sun Nov 21 18:44:43 2021 +1000 + + Merge pull request #250 from shravanshivpuri/topic-recognition + + Topic recognition - UNet3D Implementation on CSIRO Male Pelvic dataset + +commit f4c7dfeaf7c9af1d0c33ee36110c38ce9303fb32 +Merge: eac7e6c3 3a52bcc3 +Author: Shakes +Date: Sun Nov 21 18:42:42 2021 +1000 + + Merge pull request #248 from ltaylor231/topic-recognition + + Lachlan Taylor s4583004 Improved U-Net Topic-recognition + +commit eac7e6c304084aa9b065b9998ce4cdfcdb0a0495 +Merge: b2854ed1 f77e833f +Author: Shakes +Date: Sun Nov 21 18:26:08 2021 +1000 + + Merge pull request #249 from anthonynorth/topic-recognition + + Perceiver + +commit b2854ed1fd1a8310e40344575794f8f5dd00a26f +Merge: 462b45e6 61e7d5c2 +Author: Shakes +Date: Sun Nov 21 18:24:37 2021 +1000 + + Merge pull request #247 from RichardMarron0/topic-recognition + + Richard Marron - Major Project (Improved U-Net) + +commit 462b45e635fa552cf62d7e7a181612e49755af4f +Merge: 6e9ca18d 18e5870b +Author: Shakes +Date: Sun Nov 21 18:22:38 2021 +1000 + + Merge pull request #245 from AnQiYan/topic-recognition + + Topic recognition-Improved UENT_S4413599 + +commit 6e9ca18d0dc2fe738538bf9c7a86c62d9db3aecb +Merge: c1343769 545c4c9d +Author: Shakes +Date: Sun Nov 21 18:20:08 2021 +1000 + + Merge pull request #244 from tannishpage/topic-recognition + + 45827422 Report Submission: Improved U-net ISIC Segmentation + +commit c1343769e7a5b50e99863ce96ffe907f1e0aef49 +Merge: 0c0edc03 bfcf910e +Author: Shakes +Date: Sun Nov 21 18:17:34 2021 +1000 + + Merge pull request #242 from JohnCom/topic-recognition + + Topic recognition merge s4079475 John Cominos + +commit 0c0edc03acef519cb933baa7cc59cdeb982aad1f +Merge: 183b7747 f77e56d0 +Author: Shakes +Date: Sun Nov 21 18:15:08 2021 +1000 + + Merge pull request #241 from kexin28/topic-recognition + + S4659241-GCN + +commit 183b77479f7916e0fe33b2891b1111849e8670f8 +Merge: c02046ac 4a88e2bc +Author: Shakes +Date: Sun Nov 21 18:12:10 2021 +1000 + + Merge pull request #240 from Keith-Dao/topic-recognition + + StyleGAN implementation for OASIS Brain MRIs + +commit c02046ac2644b06eefd24bd23063ab9b1dbab8b9 +Merge: 68c1ae75 0e592176 +Author: Shakes +Date: Sun Nov 21 18:10:14 2021 +1000 + + Merge pull request #239 from OliverRuffell/topic-recognition + + StyleGAN2 implementation on OASIS Brain dataset + +commit 68c1ae751a9b5879ad7fd576850bac8e7f1614b4 +Merge: 75b9d419 9f6f431d +Author: Shakes +Date: Sun Nov 21 18:07:33 2021 +1000 + + Merge pull request #238 from SteveInUQ/topic-recognition + + S452842_GCN + +commit 75b9d419a844d7d0924aaf115ef37eed6b0ba6ec +Merge: 3386eaaa 9df87ffe +Author: Shakes +Date: Sun Nov 21 18:04:47 2021 +1000 + + Merge pull request #237 from yexincheng/topic-recognition + + 45662959-YE-StyleGAN + +commit 3386eaaa799c92ddbe0b74c7f1efd62e277eca4c +Merge: 5067fcac 463c6b5b +Author: Shakes +Date: Sun Nov 21 18:01:09 2021 +1000 + + Merge pull request #236 from Zacccc0603/topic-recognition + + Improved Unet model + +commit 5067fcac354ec3c880598802e13b46a79a84056e +Merge: 44a93d36 e0e07921 +Author: Shakes +Date: Sun Nov 21 17:54:24 2021 +1000 + + Merge pull request #234 from gwehr1/topic-recognition + + VQ-VAE implemented on OASIS MRI Brain Dataset + +commit 44a93d3671937cb754d99973ac3755db9f70ac6b +Merge: 08f9786b 3acb711d +Author: Shakes +Date: Sun Nov 21 17:52:22 2021 +1000 + + Merge pull request #232 from davidphun/topic-recognition + + 46182856 - VQ-VAE on OASIS dataset + +commit 08f9786b4a3c4ca4cc604729db14328e0a4e3790 +Merge: f60de09e ffad4e70 +Author: Shakes +Date: Sun Nov 21 17:49:39 2021 +1000 + + Merge pull request #230 from edwardguil/topic-recognition + + Topic recognition from edwardguil/topic-recognition YOLO + +commit 85e98fc44c17461740653586e39bf7b7a2306bc4 +Merge: 89081888 59d71c56 +Author: MMMMMYY <90254264+MMMMMYY@users.noreply.github.com> +Date: Sun Nov 21 17:44:26 2021 +1000 + + Merge branch 'topic-recognition' into topic-recognition + +commit f60de09ee3617c9ac5d8595e0db6f19a8dbeec16 +Merge: 59d71c56 5348d87d +Author: Shakes +Date: Sun Nov 21 17:43:59 2021 +1000 + + Merge pull request #229 from unicorn10086/topic-recognition + + Improved UNet_45464948_JINGYI LI + +commit 890818881020d0f2784c5361b0932325ce737381 +Author: MMMMMYY <90254264+MMMMMYY@users.noreply.github.com> +Date: Sun Nov 21 17:42:30 2021 +1000 + + Update .gitignore + +commit 8595fb4e543acd3bcc32f2490f8a9772fe91dcae +Author: MMMMMYY <90254264+MMMMMYY@users.noreply.github.com> +Date: Sun Nov 21 17:40:54 2021 +1000 + + Update .gitignore + +commit 59d71c5685b1f44cc09b314c80b83e3e6fe1cea9 +Merge: fceefeb1 95e2b7b0 +Author: Shakes +Date: Sun Nov 21 17:37:44 2021 +1000 + + Merge pull request #231 from StopTheBoolean/topic-recognition + + Perceiver classification on OAI AKOA Image dataset s4580127 + +commit c59f2ef4969a409906aab492802116d67051cd57 +Author: MMMMMYY <90254264+MMMMMYY@users.noreply.github.com> +Date: Sun Nov 21 17:36:37 2021 +1000 + + Delete .gitignore + +commit 024b1f6a28a6c5e65e41ebc0e8b97c7dad8e3b31 +Author: MMMMMYY <90254264+MMMMMYY@users.noreply.github.com> +Date: Sun Nov 21 17:34:53 2021 +1000 + + Add files via upload + +commit e73faecd52d528253662370c6625b547f588a0d1 +Author: MMMMMYY <90254264+MMMMMYY@users.noreply.github.com> +Date: Sun Nov 21 17:32:12 2021 +1000 + + Add files via upload + +commit 9df87ffec5fbef1766e7a5837291b9edbf76eabe +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Sun Nov 21 17:30:39 2021 +1000 + + add comments + +commit fceefeb1dba6ca44ac5d6d61bd262dd53bc09fae +Merge: eddce127 5bb891f9 +Author: Shakes +Date: Sun Nov 21 17:29:17 2021 +1000 + + Merge pull request #227 from Wangxinqian/topic-recognition + + StyleGan1_Xinqian Wang_S4565489 + +commit 5b925aa5a11789f47f1deaea5c69eab6184ad4e3 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Sun Nov 21 17:22:41 2021 +1000 + + add comments + +commit d75f6fef8c3e1247186b7ebe19c4a39413a490ec +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Sun Nov 21 16:32:22 2021 +1000 + + add comments + +commit eddce1274541a590a8413eea48bca12b81d9eb28 +Merge: ab12f8da b7fb6f55 +Author: Shakes +Date: Sun Nov 21 16:32:00 2021 +1000 + + Merge pull request #220 from lalithbv/topic-recognition + + Skin Lesion detection using YOLOv3 + +commit ab12f8da1c901702e41207fa025d861e868f544e +Merge: bd020c3d 2e35c388 +Author: Shakes +Date: Sun Nov 21 16:28:37 2021 +1000 + + Merge pull request #219 from zhuoxiao-chen/topic-recognition + + Zhuoxiao Chen - 44815404 - StyleGAN - OAI AKOA Knee dataset + +commit bd020c3d01e8659aecd291299ab61f963572c042 +Merge: 4f4bed40 b558024e +Author: Shakes +Date: Sun Nov 21 16:22:12 2021 +1000 + + Merge pull request #218 from roycek7/topic-recognition-s4625266 + + | OAI AKOA | Perceiver Transformer | 46252665 | + +commit 4f4bed402efb77a3bf1b2a50ab6938be59f50936 +Merge: 8da87f3d c80d89c2 +Author: Shakes +Date: Sun Nov 21 16:18:52 2021 +1000 + + Merge pull request #217 from haoxiangzhang-45473771/topic-recognition + + Topic recognition haoxiangzhang-45473771 Improved UNet + +commit a2d330e4ba07ef61c25b98dfaaa8e9a993b629b6 +Author: borova-siska +Date: Sun Nov 21 14:53:36 2021 +1000 + + updated code in response to the suggestions + + Updated dice coefficient to account for each class. Reduced 3 channels to 1 channel (should increase efficiency). Added image normalisation to pre-processing. + +commit bc24339acc342a4527826539ac345a4742c52d31 +Author: ByronDowney +Date: Sun Nov 21 02:45:35 2021 +0000 + + Re-added files that were accidentally deleted while trying to fix issue with Git + +commit f2dfd1e3f19cb12c6d334cb8fe99975ffcd8e511 +Merge: 3abf8597 dd326d4c +Author: ByronDowney +Date: Sun Nov 21 02:39:22 2021 +0000 + + Merged Formatting changes with updated README + +commit 3abf859746d9d2f804643f224e41a16d99ee79a7 +Author: ByronDowney +Date: Sun Nov 21 02:11:01 2021 +0000 + + Updated image files to match changes to model structure and output after adding residual connections and removing dense layer. + +commit 3f276ae3aadffc17b862c18ca9542949c733bb9f +Author: ByronDowney +Date: Sun Nov 21 02:08:42 2021 +0000 + + Added residual connections after each context module. Removed unnecessary dense layer at the end of the network. + +commit da58c90884f867916a5a7c2cf713dc6eb94d446e +Author: ByronDowney +Date: Sun Nov 21 02:07:30 2021 +0000 + + Now loads mask images in grayscale. + +commit 4d5990d4b1ed1b26a6ba2ec82995ddccec1b597e +Author: ByronDowney +Date: Sun Nov 21 02:06:44 2021 +0000 + + Updated the README file with new test Dice Coefficient result. Fixed some typos and leftover notes to myself. + +commit 08433a1d3b1b8318d89be865e13d983c1c7080ab +Author: xfchen +Date: Sat Nov 20 21:31:36 2021 +0800 + + add the missing image + +commit d3918a651188ad6002771327106bc3a389c5fe71 +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sat Nov 20 23:02:07 2021 +1000 + + Add files via upload + + Update new result file about new hyperparameters + +commit 5cfb7880ced6a2fe454bc07db09ced0ed553f128 +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sat Nov 20 23:00:57 2021 +1000 + + Update README.md + + Change the hyperparameters in yolov3.cfg and train a new model to get the better performance. + +commit 0fa0397f25ddde35dbcf630fffdb7d164c49b974 +Author: Chegne Eu Joe +Date: Sat Nov 20 20:37:02 2021 +0800 + + Updated README according to PR comments + +commit 626e7a6fa1d5ff702f4aafcc3df1d15a32ff963e +Author: Thomas Le <55824662+tomdx@users.noreply.github.com> +Date: Sat Nov 20 19:42:56 2021 +1000 + + Add missing full stop + +commit c5ac4df27aef1f29ce6cb608564dcd5f81c038f8 +Author: Thomas Le <55824662+tomdx@users.noreply.github.com> +Date: Sat Nov 20 19:42:38 2021 +1000 + + Add normalisation details + +commit 5270b85de7948cf782380953a2104969fb10014c +Author: Thomas Le <55824662+tomdx@users.noreply.github.com> +Date: Sat Nov 20 19:41:20 2021 +1000 + + Add comments to visualiser.py + +commit 9f20f571d07edb128622b6a7a4d9c05f2c613c1e +Author: Shravan Shivpuri <67152027+shravanshivpuri@users.noreply.github.com> +Date: Sat Nov 20 19:00:42 2021 +1000 + + Update README.md + + Updated training results and added several prediction examples. + +commit f1a9df221ccce8d575ebf92edfad89ac8822839f +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Sat Nov 20 18:36:02 2021 +1000 + + Deleted, the notebook file. + + I can't delete model.py since that is what the driver file calls. I'm assuming that the notebook was supposed to be deleted. The images are there for the README file. + +commit 00dea2cde1b689fddf58b249ab3379a9eb52966d +Merge: aa18cc29 8da87f3d +Author: JoeHolownia <38023547+JoeHolownia@users.noreply.github.com> +Date: Sat Nov 20 16:22:41 2021 +1000 + + Merge branch 'topic-recognition' into topic-recognition + +commit 8da87f3d0a08b38891a0e4d9f73601f04090d9cd +Merge: c4a77a73 a2e702a5 +Author: Shakes +Date: Sat Nov 20 14:24:30 2021 +1000 + + Merge pull request #214 from Flashfooox/topic-recognition + + s4589963_GCN + +commit a6d619570869a173b4266d179adf3c083662c55a +Author: Ahmed <60635173+Ahmed-HB@users.noreply.github.com> +Date: Sat Nov 20 13:20:34 2021 +1000 + + Update README.md + + Fixed comments + +commit e85d5038beaba77cb4ad70e4912c090ea30690e9 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Sat Nov 20 12:46:42 2021 +1000 + + plot losses on step3,4 + +commit c4a77a7350e8437b25fdec198420828d8a960bf2 +Merge: ced05603 3640406c +Author: Shakes +Date: Sat Nov 20 12:06:44 2021 +1000 + + Merge pull request #213 from itsukae/topic-recognition + + s4546371-HANZHANG-PULL-REQUEST + +commit ced056034bb433c1998476c47c6bcbdb8fb39ebd +Merge: 60878ed6 fa42ac78 +Author: Shakes +Date: Sat Nov 20 12:02:08 2021 +1000 + + Merge pull request #212 from Catkinsv3/topic-recognition + + Topic Recognition - StyleGAN1 Implementation - Christopher Atkinson - 44776859 + +commit 8fe701a144fb5f1a7ce8c39667e037966b4d3264 +Author: Tony +Date: Sat Nov 20 11:19:05 2021 +1000 + + Update Image. + +commit 60878ed6189f50e10e7dd65d981cf25351687225 +Merge: e521263a 5ca5b756 +Author: Shakes +Date: Sat Nov 20 10:35:31 2021 +1000 + + Merge pull request #199 from alexpatapan/topic-recognition + + S44792925 Improved UNet + +commit 5e996802b7c7cdbe11fc3ec500fb4af54265f814 +Author: Tony +Date: Sat Nov 20 10:33:08 2021 +1000 + + Updated to include data image to match True and predicted labels. + +commit 55c1e5254e29135e8938f355b7f3708d739019bc +Author: Tony +Date: Sat Nov 20 10:31:46 2021 +1000 + + Add image to match True and Predicted slices. + +commit e521263af51483dd11bada5815ba31b2e0df72ee +Merge: ec65eaf3 1d36c549 +Author: Shakes +Date: Sat Nov 20 10:17:49 2021 +1000 + + Merge pull request #198 from uly6mlv/topic-recognition + + Semi-supervised multi-layer GCN model for node classification - s4628887 + +commit ec65eaf3edfa705262a7ecb9131169ec4d5d752a +Merge: 8eb741d2 79c509a1 +Author: Shakes +Date: Sat Nov 20 10:11:11 2021 +1000 + + Merge pull request #197 from PerryYin0302/topic-recognition + + Topic recognition - improved unet + +commit e6ed872c0f71edfa4eb1f3c4af7be9bc16d47f66 +Author: s4581614 +Date: Fri Nov 19 23:33:05 2021 +1000 + + Reverted other contributors readme file + +commit aa87819e7dc8f07baa1a2378570e1edf5a3a8862 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Fri Nov 19 23:27:20 2021 +1000 + + Create loss-step4.png + +commit 21ede8700c3693ee18e06b07d23eb998688c0bbb +Author: AndrewLuong6 <51429490+AndrewLuong6@users.noreply.github.com> +Date: Fri Nov 19 23:07:30 2021 +1000 + + Update README.md + + Clarified where the dice coefficient value was computed from. + +commit 9048a88142c7951592a03ecdd650d6facf5c5196 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Fri Nov 19 22:40:28 2021 +1000 + + fix loss overlapping bug + +commit 7bb32b71ae24685d716d7c5c7f9868ed17acb204 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Fri Nov 19 22:40:01 2021 +1000 + + Create loss-step3.png + +commit 49069420541ae7d105edff2caede015c2ab4a61b +Author: Aryaman <58369369+aryaman4152@users.noreply.github.com> +Date: Fri Nov 19 22:29:42 2021 +1000 + + Added clarification on normalisation + +commit 307d24aedf7d7ee8129280aba68f98d887b404e2 +Author: Nifu +Date: Fri Nov 19 17:56:44 2021 +1000 + + Add test set metrics from ipynb to README.md + +commit a9a0e61f3766df1a2d5d5de7673a4c5b9e31f398 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Fri Nov 19 13:41:32 2021 +1000 + + plot loss of resolution8 + +commit bf3de47312faead470b37bbe395d0cfb1ca64fdf +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Fri Nov 19 13:40:38 2021 +1000 + + Create loss-step2.png + +commit 0e59217617c5e29d0492cf672e379894a2c1864c +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Fri Nov 19 12:48:17 2021 +1000 + + changes according to suggestions. Loss graph and references in the README + +commit 791e8f98f66c26e23f221ed23a130c31bd1e9e76 +Author: AndrewLuong6 <51429490+AndrewLuong6@users.noreply.github.com> +Date: Fri Nov 19 11:46:22 2021 +1000 + + Updated Images to Include Background + + Previous images had clear background. Added white background so text could be read. + +commit 0391c421ca55e6b03f76d9267eb0877af55376bd +Author: AndrewLuong6 <51429490+AndrewLuong6@users.noreply.github.com> +Date: Fri Nov 19 11:44:51 2021 +1000 + + Update README.md + + Fixed typos in README images and formatting. + +commit 0e4d60e27ba802cf37443c38b2a172d47a892b4d +Author: AndrewLuong6 <51429490+AndrewLuong6@users.noreply.github.com> +Date: Fri Nov 19 11:43:37 2021 +1000 + + Added Accuracy Plotting and Adjusted Hyper Params + + Added functions to plot the dice coefficient and loss values. + + Adjusted hyper parameters to be smaller image size, allowing for more epochs. + + Normalised the images by diving by 255. + + Also added the output log of 1000 epochs for proof. + +commit 2e35c388493c04693cb0ff55a48201d671547213 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Fri Nov 19 10:24:02 2021 +1000 + + Improve reference list + +commit 1220954da3eee420b204e06952c8642dc57b246e +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Fri Nov 19 10:23:27 2021 +1000 + + Add reference list to the READ.me + +commit 17cf59840b3b4c3e2067ce973983ed7ca46741c5 +Merge: be08c058 80d2187d +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Fri Nov 19 10:23:11 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/yexincheng/PatternFlow into topic-recognition + +commit be08c058a64596d13d3c3680c9fcd708db6afb93 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Fri Nov 19 10:22:56 2021 +1000 + + plot losses + +commit c457f24d861ce2f32a229f62d7d894f586cf62a9 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Fri Nov 19 10:22:33 2021 +1000 + + Update README.md + +commit aa85a39ea1e40df9759bfacae5f96d34ebcbe3fd +Author: Joshua Lee <37468566+leecwj@users.noreply.github.com> +Date: Fri Nov 19 10:08:31 2021 +1000 + + report clarification + +commit 74d9cb19672cfc82c9006b174362c147c0133b2c +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Fri Nov 19 01:53:30 2021 +1000 + + Update README.md + +commit ea9b5c5bd24317c978c651b0ad4f6ccf549fbffa +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Fri Nov 19 01:52:45 2021 +1000 + + Update README.md + + specify the function name of features + +commit 95d07738f0f696621a74b6330ae7067e11d4d929 +Merge: 5da38b88 9eec17a3 +Author: joe86726@gmail.com +Date: Thu Nov 18 15:43:34 2021 +0000 + + pull + +commit 5da38b88de025e101c8d0ca6261f8557c732bc05 +Author: joe86726 +Date: Thu Nov 18 15:23:24 2021 +0000 + + added comments for model.py, generate.py, train.py + +commit 9f6f431d25802ce9ce3c297c90c54e9c8a45695c +Author: SteveInUQ <61926395+SteveInUQ@users.noreply.github.com> +Date: Thu Nov 18 21:34:24 2021 +0800 + + Update README.md + + Update the format of the image + +commit 8b92661c21b8d9e4db11244667f6dcb5ed3fd760 +Author: SteveInUQ <61926395+SteveInUQ@users.noreply.github.com> +Date: Thu Nov 18 21:28:01 2021 +0800 + + Update README.md + + Update the result of GCN_model + +commit 144f803e9b58c7e4b857725c9f2dc94ec1107389 +Author: SteveInUQ +Date: Thu Nov 18 21:22:54 2021 +0800 + + Update the size of training, validation, test dataset + +commit 029cc54733eaccb1ad83763112c3618f269bf13f +Author: SteveInUQ +Date: Thu Nov 18 21:20:57 2021 +0800 + + Update the result of GCN_model + +commit 13617d57f99d036e8baeef813f29029c32d6caa7 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Thu Nov 18 21:51:44 2021 +1000 + + More description of generate_AKOA.py in READ.md + + More details about how the generate_AKOA.py script works are given, and the input of the generator and the output saved images are specified. + +commit 1c22f426b22d905d214e57b12d2527057a7c3aaf +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Thu Nov 18 21:29:49 2021 +1000 + + Fixed the typo in the email. + +commit 9bbe97b1ace43fb33389fd179e3b87de31e1382c +Author: Nifu <58281789+fzmi@users.noreply.github.com> +Date: Thu Nov 18 19:59:18 2021 +1000 + + Revert README.md + +commit 5ca5b7569e6a5850eb2e2e300df820b9d640c188 +Author: Alex Patapan +Date: Thu Nov 18 17:18:24 2021 +1000 + + fixed typo + +commit 426a175fd47f8fa105f7ce8664a4388f21f16c72 +Author: Alex Patapan +Date: Thu Nov 18 17:15:55 2021 +1000 + + updated readme to reflect feedback + +commit 07ef42d5328a1a662d5df74244b357fa65208dc3 +Author: MarkCoulon <88473455+MarkCoulon@users.noreply.github.com> +Date: Thu Nov 18 07:42:33 2021 +1000 + + Incorporated feedback into readme file + + Added average dice score + +commit 463c6b5b78c647e9d90fe479b423e3d04b769293 +Author: Your Name +Date: Wed Nov 17 21:16:23 2021 +1000 + + solve the problem that pictures are not displayed + +commit 74b95602bc8b219d37d13863255340651bdfddd6 +Author: Your Name +Date: Wed Nov 17 21:09:40 2021 +1000 + + Solve the problem that pictures are not displayed. + +commit 88110e2b6501532b31ecbdd9b637dfdc9a58e2ce +Author: Your Name +Date: Wed Nov 17 21:09:08 2021 +1000 + + Add an image. + +commit decbf0dc5db59cb722eea776abe340d2c0cec201 +Author: Your Name +Date: Wed Nov 17 20:55:23 2021 +1000 + + Rewrite the readme document. + +commit ff66a9393a843ff0b1e57100813e68bdffe3f0c7 +Author: Your Name +Date: Wed Nov 17 20:54:07 2021 +1000 + + Add titles for the output. + +commit e610f053cae761a76bbfc32b183ff4603efcec23 +Author: Your Name +Date: Wed Nov 17 20:53:04 2021 +1000 + + Redefine epoch number to test model. + +commit 841d8f4e8597cdc1c02e124139b3160bdf0788ab +Author: Your Name +Date: Wed Nov 17 20:51:50 2021 +1000 + + Add print sentence to show average dice. + +commit 0ce437549c5329d95ca5b7a26afbc59acdd87b6f +Author: Your Name +Date: Wed Nov 17 20:50:35 2021 +1000 + + Rewrite the Improved Unet model. + +commit 9a2c6ecea76a33d19a0307fc5108b3d549f05b32 +Author: Your Name +Date: Wed Nov 17 20:48:41 2021 +1000 + + Modify the map function. + +commit 641c5aac0c4781187208e2efbe9ea410addbabe2 +Author: Your Name +Date: Wed Nov 17 20:47:30 2021 +1000 + + Add some images for writing README. + +commit e8246fed9ed829d3c233daf1a6cc35bec7a8e1e9 +Author: Your Name +Date: Wed Nov 17 20:45:47 2021 +1000 + + Delete some invalid images. + +commit 40e80957ebe980800a176f25e45f7f6b6125f5ae +Merge: fcb61389 b9e5ea66 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Wed Nov 17 20:36:50 2021 +1000 + + Merge remote-tracking branch 'origin/topic-recognition' into topic-recognition + +commit fcb61389f20bbacfc09edfa15daf0d6062174005 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Wed Nov 17 20:36:01 2021 +1000 + + Remove commit 02e5662 + +commit ffcec4072785082b91a953f3bd2ebc6dc1e3f9ab +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Oct 22 14:16:53 2021 +1000 + + Revise README.md + +commit ad202dcfa44a00a82c14a77012336eb2cdb7d5d8 +Author: wakame 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+Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Sun Oct 17 21:08:51 2021 +1000 + + upload the files to train model and to evaluate the performance for the improved Unet + +commit 037dd581831c450fb001f903d361ac7dcbb3077a +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Sun Oct 17 21:05:29 2021 +1000 + + upload the dataloader and criterion files for the improved UNet + +commit 6719ccc5a9b98495a6df2d830410be013677faa4 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Wed Nov 17 14:54:20 2021 +0800 + + change the description of YOLOV1 to yoloV3 + +commit 5d22777d0d433368d192b64628f69974a20e71e4 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Wed Nov 17 14:43:29 2021 +0800 + + label function to convert groundtrue. + + ground truth annotations preprocessed to be converted into YOLO format + +commit ca87d30ac24fe5910b9d7b22a40a1f8d2f6d428a +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Sun Oct 17 20:56:21 2021 +1000 + + upload improved Unet model file + +commit b6bcf3a31ac46b0d75de1d1edaa8ec2688d36b31 +Author: wakahide23 +Date: Mon Oct 18 07:30:47 2021 +0000 + + revised colab file with segmentation part + +commit 3877806e3b827e6ab28dd1a842804a7f88c8273c +Author: wakahide23 +Date: Sun Oct 17 06:46:49 2021 +0000 + + Improved Unet file from Colab + +commit 9e81c7dde878acbefac989ef0acda86bb5a25149 +Author: wakahide23 +Date: Fri Oct 15 04:59:26 2021 +0000 + + upload colab.file from Colab + +commit a4ee4bc8b9b76035a4ee6234384f428c6c3c9ced +Author: wakahide23 +Date: Fri Oct 8 07:00:13 2021 +0000 + + test2 + +commit 00436fa7e831db772798db44b6f3f00bd598e599 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Oct 8 16:07:59 2021 +1000 + + Delete Musk_RCNN.ipynb + +commit 9d6ce0e45bfa2c5e10fd9d5791e98ac218b71086 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Oct 8 16:11:33 2021 +1000 + + upload dataloader + +commit 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README.md + +commit 30926e96400b0f16510f6db051ded118af5a7dfb +Author: MujiDipto +Date: Wed Nov 17 14:21:36 2021 +1000 + + Revert "Update README.md" + + This reverts commit 7a95de4a2da6f6bbb13243417d87014a897dbf21. + +commit f9db05bbde31195a4157d1a50294863fb5c25e9e +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Tue Nov 16 23:26:59 2021 +1000 + + Update README.md + + New version + +commit 2620a6970e4e91c5eed48893c2acb56e011d4354 +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Tue Nov 16 23:13:22 2021 +1000 + + Update README.md + +commit f424e947cd6629d94756c420346232758efbcce6 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 10 18:00:27 2021 +1000 + + Create sample + +commit f2d4dcd7d360ee51d1eb373d6f6923bede6191ee +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 10 17:57:37 2021 +1000 + + Update train_stylegan.py + +commit 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<64070555+mparker2103@users.noreply.github.com> +Date: Mon Nov 8 17:37:19 2021 +1000 + + Updating strides in convolution model + +commit 0faf8e4fa4205935f3dc5c171c21cba01425ee15 +Author: mparker2103 <64070555+mparker2103@users.noreply.github.com> +Date: Mon Nov 8 17:31:34 2021 +1000 + + Updating model to include addition layers + +commit 8ace985fd3bc30fc164da1fd579f0dd3e5ebc8fa +Author: mparker2103 <64070555+mparker2103@users.noreply.github.com> +Date: Mon Nov 8 17:05:18 2021 +1000 + + Committing final model file + +commit ba9639ab1b6bfa2f44b3cfd1db8d017b86b6688e +Author: mparker2103 <64070555+mparker2103@users.noreply.github.com> +Date: Mon Nov 8 17:04:35 2021 +1000 + + Delete Improved_UNet.ipynb + + Deleting old version of notebook + +commit ea9609ebd579b413a4f2d6e5e35a45b29cd08477 +Author: mparker2103 <64070555+mparker2103@users.noreply.github.com> +Date: Mon Nov 8 17:04:06 2021 +1000 + + Update README.md + +commit da24f784739de001690d0e8bef61b8da1ff643ac +Author: mparker2103 <64070555+mparker2103@users.noreply.github.com> +Date: Mon Nov 8 15:50:10 2021 +1000 + + Updating format of model file + +commit 96b8cc68670b23cc4f120c32260bbd89e024c4c6 +Author: mparker2103 <64070555+mparker2103@users.noreply.github.com> +Date: Mon Nov 8 15:43:15 2021 +1000 + + Committing model colab file + +commit 5de389556fdcf1c6f3ac15733596e4413b8d3086 +Author: mparker2103 <64070555+mparker2103@users.noreply.github.com> +Date: Mon Nov 8 14:44:46 2021 +1000 + + Update README.md + +commit 85f478eb613098bb74a18b74eb3047839732a411 +Author: tsyyyyyyy <89067103+tsyyyyyyy@users.noreply.github.com> +Date: Mon Nov 8 11:37:31 2021 +0800 + + Update README.md + + Edit content of README.md + +commit 240313a590e32717c9dccc13ab8253a343ea1de5 +Author: mparker2103 <64070555+mparker2103@users.noreply.github.com> +Date: Mon Nov 8 12:19:00 2021 +1000 + + Delete PatternFlow/recognition/s4436238_UNet directory + + Deleting incorrectly saved directory + +commit 69c04ed922d51f9ad7a6d05aa95e06f3586a62d9 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README.md file + Update the README.md explaining the algorithm. + Remove unused image from the images folder. + +commit 754e1907fbfdaa32fcaac4296209391b16d9e313 +Author: Shiyan Tang +Date: Mon Nov 8 00:31:24 2021 +1000 + + Update images in the images folder. + Remove unused images in the folder and add some sample training images from the training dataset to it. + +commit 7706b0f25a27908664982a8405ec7f1e2a9fcae0 +Author: Shiyan Tang +Date: Sun Nov 7 23:37:01 2021 +1000 + + Upload formatted images used in readme.md. + +commit a151b1274ce6e2f6516c70fea2f57d5bebeab2b8 +Author: Shiyan Tang +Date: Sun Nov 7 22:39:40 2021 +1000 + + Add images used in readme.md. + +commit f06ae76094196a8fff49dc5fb4891f8d55ae6866 +Author: Shiyan Tang +Date: Sun Nov 7 22:20:31 2021 +1000 + + Add images for readme.md + Add images displayed in readme.md to images folder. + +commit 0517a5f6f218b89646dcdb1cf0baebce818e38bf +Author: Shiyan Tang +Date: Sun Nov 7 22:10:23 2021 +1000 + + Comments udpate. + Modify the comments and function descriptions for the scripts. + +commit 3fc5f0214f60bfcc856aa854ef69078aa19c2076 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sun Nov 7 19:11:03 2021 +0800 + + Update readMe.md + +commit 2f794fa29da90002bd5c1e2eb4b4c22a62912e0d +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sun Nov 7 19:09:52 2021 +0800 + + Update StyleGANNetwork.py + +commit 4f7731139dd0da39205dc5adb33f71e1eeff20ef +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sun Nov 7 19:03:41 2021 +0800 + + Update readMe.md + +commit f267c8bdf9f9bdef8fb53d12cee50d38558e598b +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sun Nov 7 19:02:56 2021 +0800 + + Update readMe.md + +commit 1fda31db26beebc03076c980357556c5ce345d69 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sun Nov 7 18:56:58 2021 +0800 + + EMA moudle adding + +commit 25503c08fa2a41b838e2b988e55b8fe171e205ba 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<64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 21:36:54 2021 +0800 + + Update README.md + +commit cc78e089c1c7ad1bb981504bacd42db1bf97a4cb +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 21:36:29 2021 +0800 + + Update README.md + + complete the README.md model algorithm part. + +commit 226d8fa3a8baaffc36e71ecb7eaf9519bab09fb7 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 19:18:58 2021 +0800 + + Add files via upload + +commit 1fdf733703969bf956186bcce7b2eaa91263aa11 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 19:18:10 2021 +0800 + + Create Notes + +commit bcd96db4c475830aaafa9e144654e993047782c8 +Author: mparker2103 <64070555+mparker2103@users.noreply.github.com> +Date: Sat Nov 6 20:30:09 2021 +1000 + + Delete Improved_UNet.ipynb + +commit 98741f47d1abf434b4275b24b26e77ac6d1c2983 +Author: mparker2103 <64070555+mparker2103@users.noreply.github.com> +Date: Sat Nov 6 20:26:15 2021 +1000 + + Updating file reading method + +commit a33d992d7447cfc4380000e2fa914798c4616b10 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 17:47:56 2021 +0800 + + test commit + +commit b5010b0cb9161fc1430575fe656cc6a1659be60a +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 17:37:50 2021 +0800 + + add ref + +commit 6850ba3f47d5f5784b52c868ec28d304f72cce66 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 17:36:47 2021 +0800 + + final README + +commit bfc15822496f7b3b701122d2947ed082497386a8 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 17:02:30 2021 +0800 + + Update readMe.md + +commit 14e79380a64ab38ef0d4f9c03a7f9a5f0530021c +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 16:44:47 2021 +0800 + + result + +commit 87ec85262a5ec3d88087b5fdc2d1439b035a84a5 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 16:44:15 2021 +0800 + + Rename Unet_ISICs_JupyterBook.ipynb to demo.ipynb + +commit 69f65e441e2fc5d76e38a1f964acb153cdc492c3 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 16:33:38 2021 +0800 + + Update readMe.md + +commit e1208d8d456ccbd3877cadabc5d807fba786aa28 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 16:31:15 2021 +0800 + + Update readMe.md + +commit e063d97b8a3f5d8c5efeb4397171704e0a1b52d3 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 16:30:27 2021 +0800 + + Update readMe.md + +commit bbc0c52978163fa01d4b4ece222f3c16568a160e +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 16:29:28 2021 +0800 + + Update readMe.md + +commit cbf62964add10c5c074ec0d2e78fef3ad19e54ca +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 16:28:46 2021 +0800 + + Add files via upload + +commit 0797db665d969a2569a77b8f4b4027aa99a2a431 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 16:27:11 2021 +0800 + + Update readMe.md + +commit 79034cf9dd63a9178eb1345dcc304d02a0829e8e +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 16:26:49 2021 +0800 + + Update readMe.md + +commit de8f91ab4465faefefb5c9e66027ce900d34263a +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 16:25:59 2021 +0800 + + Add files via upload + +commit dd89c991fcd4cb7df3169107b6ea34ce6906aa98 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 16:24:02 2021 +0800 + + Create intro.md + +commit 0f77fe27759cae5e171edc70fb6a2aae3a5920a4 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 15:38:41 2021 +0800 + + Add files via upload + +commit 9fd8b2a687263163e54a8af75af8457e73722fb3 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 15:33:26 2021 +0800 + + Update mainTorun.py + +commit e947ad8ddad4cdac05f408a435b3f3bd1c599269 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 15:32:07 2021 +0800 + + Update mainTorun.py + +commit 011ceb13be4d19dd189a19e8b2cafcb3ad61c547 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 15:31:10 2021 +0800 + + Update README.md + +commit 09b22e4e0fe7a2159afc8031cab6a7591c35e6c4 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 15:27:15 2021 +0800 + + Update README.md + +commit d92554a5945d0e9580be87b954ef201c50338816 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 15:23:57 2021 +0800 + + Update README.md + +commit 309c79242408ad0dfa3389e96c6b9c3dedf29705 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 15:22:29 2021 +0800 + + delete some unuseless import + +commit fc16774f84872609468326b244f15b7c9ea6e977 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 15:19:34 2021 +0800 + + training script + + This script describe how to use progressive growth to train StyleGAN + +commit a739805ff37af9b673b7185798551fe0c521b521 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 15:13:53 2021 +0800 + + main to run + + This script to start train + +commit eba5421199e8a5badf3741e7406247db5647f145 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 15:13:15 2021 +0800 + + drawio can not read. Delete + +commit b667a4bf61b7f125538633f7b7b9b10195aac352 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 15:12:57 2021 +0800 + + delete png + +commit 1a701337c2929d396d92b66dc72b2759998f8ea9 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 15:11:31 2021 +0800 + + Add files via upload + +commit b635c762444495ff83ef6730d452815340b74269 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 15:10:57 2021 +0800 + + StyleGAN + + Upload StyleGAN's network + +commit 36f1c45d159cc2be856b1f7d47e0d70bebfdf068 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 15:09:28 2021 +0800 + + delete png + + not suit for here + +commit 53467a6a932d2fa51d3c560a58924163a0b2e1ca +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 15:08:52 2021 +0800 + + Delete some notes + +commit 39739db3f5a9dd98f75a5ad9ebcfaa795983905d +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Nov 6 14:54:50 2021 +0800 + + create some utils will be used in training + + Residual_concat + Equalized_learning_rate + MiniBatchStd + +commit c6a31278a5a0acdfcefb84fb9e8c118635d1846b +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 12:52:46 2021 +0800 + + Update README.md + + Adding project structure and dependencies. + +commit 61c8a5449914e30faa953118a27b31ea02773496 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 12:49:25 2021 +0800 + + Delete testImage.py + + This part already shown in jupyter notebook ipynb file. + +commit cfb9ad6e88db85005e3fbe86ecc01a762959cb5e +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 12:49:14 2021 +0800 + + Delete compute.py + + This part already shown in jupyter notebook ipynb file. + +commit 07b3f7396d1c2c55cf8125498e5a4844a78ec049 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 12:40:28 2021 +0800 + + Rename 2d_from_3d.py to image.py + +commit 157406fa4d847de1e6a67ca23e1a103850dec1a1 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 12:40:05 2021 +0800 + + Rename image.py to 2d_from_3d.py + +commit 5b2c38fa1240572106b38e59241d0a6a71645af8 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 12:38:45 2021 +0800 + + Create image.py + + Image data preprocessing + +commit 4fe089ffbc07a9711caa627c3386c29820de5d0c +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 12:19:14 2021 +0800 + + Add losses comparison plot + + This plot also including dice and IoU accuracy to determine the model sufficiently. + +commit e7ce61f0a9d2b3da7db0e41f7eb6a56f1fd0f6a1 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 12:16:16 2021 +0800 + + Add Unet Jupyter book version via upload + + This is Jupyter-book view of Unet model. You could run and check the result of the model. + +commit e3ae5f6952e4200ed03905fa7372dc2234e338ee +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:20:26 2021 +0800 + + Create ploting.py + + Update the final view of ploting script. + +commit af42d7db400b9303806dbdd4add840145bbc0cf0 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:19:10 2021 +0800 + + Rename metrics.py to Metrics.py + + Rewrite the name of this script. + +commit 667f89bc18c7456d4096c65deb625b8ef1529f58 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:18:25 2021 +0800 + + Create Models.py + + Update the final view of models structure. + +commit 76e023c67a30eff33cc9f221bb59f52720d2b3cb +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:16:32 2021 +0800 + + Create metrics.py + + update the final version of metrics. + +commit a7453786ea67835de892a381bf551f0bc1be5d34 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:15:07 2021 +0800 + + Create losses.py + + update the final version of loss function. + +commit 614644a37b52c8e7a396dcf03dd2cc6d69034625 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:13:13 2021 +0800 + + Create Data_Loader.py + + update the final version of Data_Loader; + +commit 0c568d2b52cfbb252c323d278e7b6f37b69ea463 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:08:17 2021 +0800 + + Add files via upload + + upload train result imgaes. + +commit 6e00b55481e279760ce17aa2dac70c54c0b58052 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:05:57 2021 +0800 + + Delete unet1.png + +commit 30be7e3400cd4e4359779b44a39cdf1935c70011 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:05:47 2021 +0800 + + Delete L_9_epoch_9.png + +commit 0af64a2b2ecbf5b25f104785265b6c658776b4c6 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:05:37 2021 +0800 + + Delete L_8_epoch_8.png + +commit b142f7b442a51e332d403eb5a9fed26ea13eeea1 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:05:29 2021 +0800 + + Delete L_7_epoch_7.png + +commit b920fb2055cd3927f37d430e67ccf7224b874405 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:05:18 2021 +0800 + + Delete L_6_epoch_6.png + +commit e0e1c667db4f72f6f26fa0914ca7c273e9a4ed4d +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:05:07 2021 +0800 + + Delete L_5_epoch_5.png + +commit 2b748775613a8e64e05c9474dcf86ea115bb69e8 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:04:55 2021 +0800 + + Delete L_4_epoch_4.png + +commit 326dc9281cc34494c269cfd51c5e4daa715cb8e0 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:04:38 2021 +0800 + + Delete L_3_epoch_3.png + +commit 987fdef241d0aeaca4c89b24f0c3922f85fd41c3 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:04:28 2021 +0800 + + Delete L_2_epoch_2.png + +commit e4286cc90d2f1c521f0cc8ec5a8899da7d456522 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:04:20 2021 +0800 + + Delete L_1_epoch_1.png + +commit 852636c0884d216fa623bbb092769416bfa0016c +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:03:47 2021 +0800 + + Delete L_0_epoch_0.png + +commit c8cff7a46bead977514a83ce8d4016b17a160139 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:03:25 2021 +0800 + + Create some notes + +commit 14268bb489bfd19c48a9b91ced137d90dfd7791a +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:02:53 2021 +0800 + + Delete result_images + +commit 63e2004133f3bdf69cf8b21431a6939c67a9ebee +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:02:03 2021 +0800 + + Create result_images + +commit f1a299889eba05bb25e7c678307a17301677569f +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 02:01:10 2021 +0800 + + Add files via upload + + upload training result images + +commit 5f9f970f8227bed2db893ae53f8a2480aef50aa0 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 01:53:10 2021 +0800 + + Update README.md + +commit 91f2a6a327763406f36d7380457e159aeb0c3835 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 01:51:56 2021 +0800 + + Update README.md + +commit 171f375f5afb4aa075e8a77c58882a62d76dd7df +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 01:51:19 2021 +0800 + + Update README.md + +commit 3428eba7b8506e716115adb04173eb71f07701a7 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 01:50:47 2021 +0800 + + Update README.md + +commit ae69a7b1796f47ea93226bfe7e24d390dea2f71b +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 01:50:15 2021 +0800 + + Update README.md + + Update information about Dependencies and ISICs data set. + +commit db5b5c5e2a23d310e21564f42e7f06a5b2415f3a +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 01:45:16 2021 +0800 + + Update README.md + + update brief introduction. + +commit aa9dfd099eeccff27df4f9508e114da55a3a7d96 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 01:39:40 2021 +0800 + + Update train.py + + fix the plot part - add name for each elements. + +commit a8e327fafbeed3b9e6c8e93276028a96e89714f5 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 01:37:08 2021 +0800 + + Create compute.py + + This will shown the result of average dice and IoU. + +commit aad4eafcce099910b07a97b32a0905faf8cba6e2 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 01:34:02 2021 +0800 + + Create testImage.py + + test the algorithm working efficiency. At the end of the model, it will represent a group of images from previous image -> resize -> generated -> target -> real target. + Then IoU and Dice efficiency will also show as result. + +commit 1d8525a7884855a1a40fc95051b1ffacbc3b025a +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 01:28:41 2021 +0800 + + Create test.py + + Update final version (V3.0) of test file. + +commit 5827a6166c458b3e05613ae254681b9bc8ef4951 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 01:25:34 2021 +0800 + + Update train.py + + update plot function. + +commit 223ab00500fe8e7e4905c52269bb90ea6d0a6d22 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Sat Nov 6 01:22:27 2021 +0800 + + Update train.py + + Update images, training loop, write in Tensor-board algorithm. + Refine the train model structure - deleting some blank lines, rewrite inline comments. + +commit 63e370267cdeab0f3cfaff8fe9cb6bc9290d69b0 +Merge: c4f468eb 208edb23 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Nov 6 00:27:23 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/ShangGao-forever/PatternFlow into topic-recognition + +commit c4f468eb054b0cd9cc588ed26255b969af966cfd +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Nov 6 00:27:14 2021 +1000 + + Update Model2.py + +commit 399f7a4b1d8c9c5c6ad094e29054e35838e690b9 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Nov 6 00:27:10 2021 +1000 + + Update Model1.py + +commit 208edb23b94e769b1e264768fc8110c66a2d33c6 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Nov 6 00:17:39 2021 +1000 + + Update train_stylegan.py + +commit 52759b5e6dac2cfaa182cf9b210f0d0c7fd5b3d7 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 23:32:35 2021 +1000 + + Update README.md + + Update pictures + +commit 9aa0fd878f7cacc9f0fd3e6f69d6ae76a7c11f9c +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 23:31:32 2021 +1000 + + Update README.md + +commit 2dab6a6ed99df72b40dc20667dd5640f64379074 +Merge: 11a40b1d f19b3f41 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 23:29:56 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/ShangGao-forever/PatternFlow into topic-recognition + +commit 11a40b1deafad9fb52f8ddec5aea498344b3f264 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 23:29:46 2021 +1000 + + Create train_stylegan_new.ipynb + + correct ipynb version of train_stylegan.py + +commit f19b3f417b291e9f9de38f3ebda99db668b62e5e +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 23:27:30 2021 +1000 + + Delete train_stylegan.ipynb + + Wrong ipynb file + +commit b7fc52ec38eba8437596be0fc1d857260173f8e8 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 23:11:16 2021 +1000 + + Update README.md + +commit afb3c7a5888a965d851ab2d2a5596fb5983dc54e +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 23:10:15 2021 +1000 + + Update README.md + +commit 8dd69f92157f8277053764cb259aeb05ae959b3b +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 23:04:49 2021 +1000 + + Update README.md + + Add training process + +commit d99803de7fc3e4ba7bf8a86aa1fdd213a3e29607 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 23:04:35 2021 +1000 + + Create sample-iter55000.png + +commit 2b4a83d4d29ff8abf0d41e26e981af6353019add +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 23:04:31 2021 +1000 + + Create sample-iter5000.png + +commit a19fa58f0a4222845c992b38006f7b1d22e5da15 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 23:04:29 2021 +1000 + + Create sample-iter32500.png + +commit f3ebe1473b235c746ecf9fb8c85d8b957d1a0214 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 23:04:26 2021 +1000 + + Create sample-iter20500.png + +commit b29bce90f55fd70f41e8a9209b33cfdec2388233 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 22:49:24 2021 +1000 + + Update train_stylegan.py + +commit f59e9c6268b984dc8aad426fac817a59c1ea0b5d +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 22:49:20 2021 +1000 + + Update README.md + + Details + +commit 11ba20837dd95e7c173861bd08f390cba98cb08e +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 22:36:07 2021 +1000 + + Update train_stylegan.py + +commit 6deca7984ed7d1b6f57ca7da38ef397ec167cafc +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 22:35:22 2021 +1000 + + Update train_stylegan.py + +commit cfde0e5f7be5cae4468c1ad7a70b26acccb7c20a +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Fri Nov 5 22:29:24 2021 +1000 + + Create prepare_data.py + + MISSING UPLOAD_prepare_data + +commit 0df8dc2e91913a031fe18ad02de228fe108131be +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 18:41:46 2021 +0800 + + Update comment of train.py. + + you can jump the train model, if only want to use the model. + + Actually the model is trained based on a pre-trained 15 epoch one. So please set a higher number of epoch if you want to train by your own. If you want to run to prove my work is sufficient. + + The train result from this part will be shown in the README part. + +commit 2248448541360588d2f907ddaa6ee8851e6f4fd9 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 17:29:52 2021 +0800 + + Delete Add training model + + incorrect location. all content had been moved into correct on + +commit 0494ff84da682ba7ba89be2d3a6fde5c9c820962 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 17:29:05 2021 +0800 + + Delete README.md + +commit 2c89bee550357554f15cc28ac934c869604d9a09 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 17:25:20 2021 +0800 + + Fix train.py + + - deleting the commented drop statement. + - deleting repeated part in the script. + - Adding some comments in lines + +commit f0f4e2a3b40baf81cf5fe043cc4bc1d8cd2be075 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 16:41:42 2021 +0800 + + Update train.py + + Recommit this training model. Double check the algorithm. + +commit 9a181c1fbbe6f0d524c323dc72f06d616aabbce8 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 16:11:47 2021 +0800 + + Update README.md + + Moved this part into recognition/s44935209/README.md + +commit cec798b243d45c8fa3a045e12fc3a78accac5544 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 15:58:21 2021 +0800 + + Update and rename training model to train.py + + This is the final version of the training model. I just complete the part of training loop, add saving predictions, Extracting the intermediate layers (kernals), crating images at the end. + +commit c08e55c017bb44858ed978d8a54c477e802f05eb +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 15:48:33 2021 +0800 + + Create README.md + + This is brief outline of read me file. Content will be added, once all algorithm parts had been check without any problems. + +commit 084b0933bbd34a5af3e401b49e8835c416d395f1 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 15:46:40 2021 +0800 + + Create training model + + This is the part of final view of training model. Since the initial model is created at wrong file, this file is the correct one! + Following commits are previous commit content which record which parts had been added steps by steps + + v1: Missing parts including: the summary of model, transformation of input data, train Validation Split, set optimizer by Adam, create a Folder for every data of the program. + Above parts are the final version of this project. + + v2: Update the checking part, which determine prediction folder and model exists. + Update the final version of training loop, including training data step, and validation step. + +commit 2c352abb6296fda14541dc2c4902727739f427e6 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 15:41:20 2021 +0800 + + Create s44935209_Improved_Unet_ISICs dataset + + Created the initial file at wrong file. This is a correct one. + +commit 2709f02690d0a41eaae0bbab4b73a503e25ed611 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 15:40:50 2021 +0800 + + Delete s44935209_Improved_Unet_ISICs dataset + +commit 02cfb0aba9e20b4daf78aefa67e5a0f6b5b4d234 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 15:40:21 2021 +0800 + + Create s44935209_Improved_Unet_ISICs dataset + + Created the initial file at wrong file. This is a correct one. + +commit 4bdbbafe4d373b7a8f598d8db2db7c95b6159e74 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 15:34:40 2021 +0800 + + Delete s4493520-Task1-Improved U-Net + + create this file at wrong place. + +commit 496c1e8cb9a8da65f935bfcfeb224e73228ecee6 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 15:19:13 2021 +0800 + + Update Add training model + + Update the checking part, which determine prediction folder and model exists. + Update the final version of training loop, including training data step, and validation step. + +commit 0645fd263ee769f1438cd227df48bc10c8c5d349 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 15:12:03 2021 +0800 + + Delete s4493520-Task1-Improved U-Net project + + This is a repeat file. + +commit 6a788b49548ff9377a35c979b115993c6fc83cfe +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 15:04:59 2021 +0800 + + Fix missing parts in training model + + Missing parts including: the summary of model, transformation of input data, train Validation Split, set optimizer by Adam, create a Folder for every data of the program. + + Above parts are the final version of this project. + +commit 74d6ef2ba8ee995e1a1bc800d8417aaf69d31b1d +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 14:54:57 2021 +0800 + + Add training model + + This is the first part of training model. + +commit c499688b48d18877fd3f0345e5dc39d6b1dc4ff2 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 14:45:04 2021 +0800 + + create README.md + + outline of readme content. + +commit 06526dc53ddd0bd68f5dacf0cdbe0fa81a0b4371 +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 14:36:52 2021 +0800 + + s4493520-Task1-Improved U-Net + + This is brief introduction about my project, listing a few things that i need to be finished before final pull. + +commit 28a4810dbee67f9c86d5641bbbbab256437a90ca +Author: Liz-Xinwei <64041582+Liz-Xinwei@users.noreply.github.com> +Date: Fri Nov 5 14:36:33 2021 +0800 + + s4493520-Task1-Improved U-Net + + This is brief introduction about my project, listing a few things that i need to be finished before final pull. + +commit 39d09ea02b5f49a45d081fde80d1270a96bc297e +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 15:57:33 2021 +1000 + + Improve report + +commit 5f66c08fdb6c042c677f1c70a20335c6dbffcaa3 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 15:34:38 2021 +1000 + + Fix minor bugs, reformat, add comments + +commit 05bbfc2fb18f2f80bad1a165564665d45e181556 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 15:28:46 2021 +1000 + + Reduce batch size due to vmem overflow, tune wandb + +commit be1baa4336cb9ca957bc9b78dcdf941c12d7bc13 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 14:56:42 2021 +1000 + + move image resize to dataset + +commit 0d41265a25ac2f6a80d7783abe3ec611f9eb5592 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 14:37:17 2021 +1000 + + Add more results + +commit ae9b91fe89b14cf86eab79557a362eab11a6fff6 +Author: SteveInUQ <61926395+SteveInUQ@users.noreply.github.com> +Date: Thu Nov 4 11:44:36 2021 +0800 + + Update README.md + + Fix to display error + +commit 9c76af7f78c762b6d578a47c2b30fc6646ca4131 +Author: SteveInUQ <61926395+SteveInUQ@users.noreply.github.com> +Date: Thu Nov 4 11:25:22 2021 +0800 + + Update README.md + +commit 6c2a4e5f896d4b6ecf0d621ca52cca6a129bfdbe +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 10:10:21 2021 +1000 + + Fix wrong reference + +commit 8635b47879c0cbac84c66196581069db157bd57a +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 10:09:52 2021 +1000 + + Improve README + +commit 9b0bb303105dbc946b3d4c63a5be98d96811734e +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 10:09:23 2021 +1000 + + Add simOAT + +commit 5fea5cb6da71b64b14656474117d457e2584751c +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 08:50:28 2021 +1000 + + Refactor model.py, move higher level logic to the top of the file + +commit 4b0c1ad3250372693e807b41f651bee04c8949bd +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 08:48:16 2021 +1000 + + Fix and commit loss.py + +commit b67c7bd694819a29f625c0aa8a7b3be15a208f5c +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 08:47:49 2021 +1000 + + Remove redundent image background + +commit 41774dfa853c15d315a251c4fd087c26d5e50955 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 05:11:14 2021 +1000 + + Rename dataset file to make resolve the conflict with folder name + +commit 0ba4ad8441b4dc262e7380e559e459690bc70059 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 03:59:50 2021 +1000 + + Use adamW for better performance, remove over-engineering + +commit 16b8e64be02e13117c48c943350aba759d5e16f0 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 03:57:00 2021 +1000 + + Move loss funtion to standalone file + +commit bccd545296a3a90b1fb3a93b42f97ed7e8ca4989 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 03:38:50 2021 +1000 + + Move the loss function from utils to model[WIP] + +commit 23b739a93e7b0c7c18900ae368f895ff6ae16d56 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 00:02:31 2021 +1000 + + Better bounding box drawing + +commit 01a6d6ccf1776510cadfab2b37f4fbe8c72921d7 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Thu Nov 4 00:02:02 2021 +1000 + + Refactor model with new tricks and Pathlib + +commit 42d0615e529078c282d7e87e1eb19d5283ae713e +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Wed Nov 3 23:59:52 2021 +1000 + + Move data resize logic to dataset file to get rid of numpy reference + +commit d2b367d8f1163368fb3694f8489c80919900216e +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Wed Nov 3 23:57:33 2021 +1000 + + use pycharm + +commit 30df34de778a73e9e5a8b5a308754cef9079ca90 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Wed Nov 3 17:18:07 2021 +1000 + + Allow reletive path on both OS without manually fixing backslashes + +commit 3eec960af069b424147482a4670a28ec38815ed7 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Wed Nov 3 17:17:05 2021 +1000 + + Ignore generated report + +commit 33079728d935430a6ba62ee5a34249242809aae3 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 16:04:13 2021 +1000 + + Update README.md + +commit 14bb97adf7a6521f85d63534e063d6e51514b332 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 15:51:04 2021 +1000 + + Update README.md + +commit 4baacdc16cc57c9d266607d779688c9322cd0419 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 15:49:17 2021 +1000 + + Update README.md + +commit f474c19a2dfc880634f52ec9512c0fe9ec701dd2 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 15:45:55 2021 +1000 + + Create ADAIN.png + + Read_me update:model structure + +commit 16c531426af7cc83e890079fb191c18cba69c674 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Wed Nov 3 15:41:47 2021 +1000 + + Add momentum to adam, a bit over-engineering + +commit 28de420a6e75d186b741ee5282c318a1876bcbc3 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Wed Nov 3 14:59:37 2021 +1000 + + Fix lint warning + +commit 57237698010008de018e0a3c249d5d894813193c +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 15:20:52 2021 +1000 + + Create Structure.png + +commit 5b45ada5e74c0e08387089a85c88621fb797c3c4 +Merge: 3aaa41f1 65bb777e +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 15:14:51 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/ShangGao-forever/PatternFlow into topic-recognition + +commit 3aaa41f19d27c26e4f1da973baceadf32bbf0e45 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 15:14:38 2021 +1000 + + Update README.md + +commit 65bb777e945fdaa5673d2667f21cef6fef235ebe +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 15:14:18 2021 +1000 + + Update Model1.py + +commit 5f45c531c50ac0462802452ba8a2c53faa727c9f +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 15:13:57 2021 +1000 + + Update Model2.py + +commit 6eb795343233d74d5369715b56becb2e112c104d +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 15:13:29 2021 +1000 + + Update train_stylegan.py + +commit 7d3f6380a2d389f4e56616eeb2ae6eaf21972ee0 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 15:13:25 2021 +1000 + + Update Model2.py + +commit fd8aff56fddbee9261eebb5fbae3cce80509133e +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 15:13:23 2021 +1000 + + Update generate_mixing.py + +commit 2d43cf604848cdf61945db0004972b0d048884a6 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 14:57:04 2021 +1000 + + Update train_stylegan.py + +commit df546b55cf1cda4489e8eefcdce5dc8e9e7e3d9e +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 14:57:00 2021 +1000 + + Update train_stylegan.ipynb + +commit 88931b072d7cef1327169d7e09ce17df06d1adaf +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 14:56:57 2021 +1000 + + Delete Models.ipynb + +commit 04e54e9b9828b2f060dbd76e87e987dd15b3116e +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 14:56:52 2021 +1000 + + Create generate_mixing.py + +commit 98457b748559badc7e6b1d33ceafc85a0f20dee4 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 13:44:38 2021 +1000 + + Revert "Create Generate_image.py" + + This reverts commit e5841d841757b355ae2620cb816246c1b930885b. + +commit 24c2c92ce59eb811e4fda5b7df95aead74b3a4e2 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 13:29:42 2021 +1000 + + Update README.md + +commit a04836254e7ebd9ad301ad039ef85e7fa3486642 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 13:14:14 2021 +1000 + + Update README.md + +commit 516d7377d0586a28cc2278a90f0977579479fa75 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 13:12:57 2021 +1000 + + Update README.md + +commit 2dafca9c8e5ce71de24c622cdb99f0b2d97c5c84 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 12:45:36 2021 +1000 + + Update README.md + +commit 5003adc4af27f9fae0b5ce28b242244af4db5e25 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 12:43:45 2021 +1000 + + Update README.md + +commit e4e90c3275299b89c958301a3b4aa009ec05da8c +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 12:42:38 2021 +1000 + + Update README.md + +commit 15a2232f67f1d6cf93aa3557513442474533fc1a +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 12:41:35 2021 +1000 + + Update README.md + +commit 67bc280eed6daf82a9fc1226315af53087f0ccf2 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 12:37:05 2021 +1000 + + Update README.md + +commit d521449d632e936c083182cb8f6695f5732699c5 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 12:35:38 2021 +1000 + + Update README.md + +commit e5841d841757b355ae2620cb816246c1b930885b +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 12:32:41 2021 +1000 + + Create Generate_image.py + +commit 2a426cb63cc6df9d904217849e8b7469fbd732ee +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 12:32:30 2021 +1000 + + Create size_8.png + +commit 67ec8335f83528c257f6c71711d5a9609c19c369 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 12:32:25 2021 +1000 + + Create size_256.png + +commit 4524d2410ff62200fab3a9d106a5177033c78b1a +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 12:32:21 2021 +1000 + + Create size_64.png + +commit 726d6d0362b145546d2a834a6d222201e24dcd44 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 12:32:18 2021 +1000 + + Create size_128.png + +commit 682218cb7a2d82b74dff56963516b180386c3a55 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 12:31:41 2021 +1000 + + Update README.md + +commit 6909f56d61f0d49031711d60a8afbbb07ba2eea7 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 12:31:36 2021 +1000 + + Update train_stylegan.ipynb + +commit 620c51b6737bd83c13934ed1cdc1afa2f6f605f9 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 12:31:32 2021 +1000 + + Create train_stylegan.py + +commit 5efb1ae9f070cddf2d84da72f0afd1cb0f6872b9 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Wed Nov 3 11:50:07 2021 +1000 + + Add comments + +commit 6a442b17a216bd3e74c2a24393a7a2b25dcf19ba +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Wed Nov 3 11:49:54 2021 +1000 + + Fix typos + +commit acb32faf9a2cee2f4bec94fbe34b9740840c3543 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Wed Nov 3 11:49:28 2021 +1000 + + Remove resize in the original dataset + +commit 6c88231e77bef24d636f28601c227077d69ab900 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 10:39:25 2021 +1000 + + Update train_stylegan.ipynb + +commit febdd34198dad068e99d2467527c75982a05bce1 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 10:20:02 2021 +1000 + + Update Model2.py + +commit 75fc2e33bd20dd75aeb4ceef0d5ec1a6fa4c1a3a +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 10:19:58 2021 +1000 + + Update Model1.py + +commit 739c008cc616e8be81d44c2f09a5d6a7153f956d +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 00:55:08 2021 +1000 + + Update train_stylegan.ipynb + +commit b15f9a3476dd66b3afb1b7f487e62ffbc1aa4ac0 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 00:55:03 2021 +1000 + + Update README.md + +commit bb5952a188f09327fe76d1bea1bee5e580eaca2b +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Wed Nov 3 00:55:00 2021 +1000 + + Update Dataset.py + +commit a481f4cfef4fb84e0f634ab18f400b4c6586b21a +Author: MMMMMYY +Date: Tue Nov 2 17:45:26 2021 +1000 + + Update generate_mixing_figure.py + + delete the spare argument + +commit 86603646342bc2edd1373e0e60c7cf994881bcd3 +Author: MMMMMYY +Date: Tue Nov 2 17:36:04 2021 +1000 + + Update readme.md + +commit 1516d93f18827e8ec52695cb1bc4aa6cfe9b6417 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 15:40:15 2021 +1000 + + Rephrese the README + +commit 8ac84bf8f63cbbe2549207552a99fff1366a5fe8 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 15:39:47 2021 +1000 + + Update detection head + +commit dd8a07a73502d86078fa3938456b98468b34b835 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 15:20:38 2021 +1000 + + Add images + +commit 80d2187d1779de25905f99ed7b861715c9cee88d +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Tue Nov 2 15:19:55 2021 +1000 + + delete wrong comments + +commit 1731b739a7a3ac9bcf268c5fb85b7adde668b1cb +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:57:34 2021 +1000 + + Update instruction + +commit b372463faa26cd20c3dec74009dfc91008ca04a3 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:57:20 2021 +1000 + + Add one more reference + +commit 682febba971d0695f9fa487afee078f1ca310ae3 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:57:06 2021 +1000 + + Add training and usage + +commit ee42e8a38b220f531790cbac99b3126e4d800bb5 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:56:41 2021 +1000 + + New way to show image in README + +commit 00bc9c3f5674aab746c48c3377218026771308cf +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:56:11 2021 +1000 + + talk about PA FPN + +commit bfaa00f69922eefcc8be552581155a032196ab76 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:55:11 2021 +1000 + + Add description for dataset + +commit aff09c19cd2ef1a6f0478f9362eb434c0da53ae1 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:53:07 2021 +1000 + + Allow resize + +commit 675bfb79d0bed7a450a336575c44a12e6cae26ea +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:52:54 2021 +1000 + + Remove unused code + +commit 253bb7adc8c72b3976b28d6df11b82f5597546d4 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:52:16 2021 +1000 + + Fix model APIs + +commit df21326a5010e8e34f4bea30e80808d86654f1ed +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:51:38 2021 +1000 + + Add reference + +commit 0f0e8eb28815e59d22d76f0e9ce5af9602fcba87 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:51:04 2021 +1000 + + Create a merged File to test multi-object + +commit c59aeb3fb6d4a1bcbaacbb8bee7e779bcf8044bf +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:50:45 2021 +1000 + + Fix annotation generation logic + +commit 89d08c677bc0b152e14efbd2b74706b2b819270a +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:50:26 2021 +1000 + + Add validation to dataset + +commit 1a9050141496dea727afce3811aaee6ccd94dac4 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:50:08 2021 +1000 + + Add test script WIP + +commit 4158802c735652566df454f630654f2e8b830343 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:49:43 2021 +1000 + + Allow evaluation in model + +commit 975821ea0658fcbe3f48a1d2e52a49fa306e09ec +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:49:24 2021 +1000 + + Add test script + +commit e3da7fe64f6256f8a4a6d705034a2ea6313448e4 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Tue Nov 2 14:49:11 2021 +1000 + + Add requirements, Move miscs to misc folder update tools + +commit 8296a24e892fd45255c3679ba46b6495ca5eaf5b +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Tue Nov 2 09:33:27 2021 +0800 + + Update readMe.md + +commit 5f8cf57f33ccffafb099cfe41d2ebceab25293a5 +Author: eliasxue <69616041+eliasxue@users.noreply.github.com> +Date: Mon Nov 1 23:58:23 2021 +0800 + + Add files via upload + + Upadate Readme + +commit 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13:35:53 2021 +0800 + + Update README.md + + try to fix bug + +commit de2dccb73e0678853fdcf62f729ac1858af29362 +Author: Khac Duy Nguyen +Date: Mon Nov 1 12:35:47 2021 +0700 + + Update REadme + +commit 7c6b2e045db60721a9298a2e3cb853231ef22b00 +Author: Chao-Chun Wu <52982031+white-segfault@users.noreply.github.com> +Date: Mon Nov 1 13:34:59 2021 +0800 + + Added Perceiver's result when compared to other nerual networks + +commit c32ad5d8e16cc77dcfffff3496818d1c02a83812 +Author: d7a7 +Date: Mon Nov 1 15:34:29 2021 +1000 + + Create README.md + +commit 3cb3f377283c6c9a0413cb7c788ad7e668c6d8f2 +Author: d7a7 +Date: Mon Nov 1 15:34:12 2021 +1000 + + Create README.md + +commit 9c2ade043c0054b03bf9c14cd6651a4c4285ef9a +Author: JoeHolownia +Date: Mon Nov 1 15:34:07 2021 +1000 + + Minor fixes. + +commit 0b72739dd9b5490f5444946e52db0f8f802b255f +Author: Chao-Chun Wu <52982031+white-segfault@users.noreply.github.com> +Date: Mon Nov 1 13:30:57 2021 +0800 + + Uploaded images of model training process and elaborated on ReadMe file + +commit a6e108744f6d680598e5c6ccd3dc9b7d1a31f7a1 +Merge: 4dc99c73 b9fecbbb +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 15:30:55 2021 +1000 + + Merge remote-tracking branch 'origin/topic-recognition' into topic-recognition + +commit 06939e2dcb47e4a6789146587075b0f2028f1421 +Author: Khac Duy Nguyen +Date: Mon Nov 1 12:29:13 2021 +0700 + + Complete model + +commit 7bf7ed9ab6a277f00e1d21d43c6a139c341ac3b4 +Author: Muhammad Wildan Aziz +Date: Mon Nov 1 15:29:02 2021 +1000 + + Fix plot + +commit 31db25795511ca62253dd542410e92560c310645 +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Mon Nov 1 15:28:51 2021 +1000 + + Added the jupyter notebook I've been using to train the models and make the plots + +commit 79565892738988fc77abb8c5f2f48155a7df329c +Author: d7a7 +Date: Mon Nov 1 15:27:48 2021 +1000 + + Update README.md + +commit 0d404604c849e0395f7430f2f9e33d90d97093b6 +Author: yexincheng 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Comments + +commit b43c115261939f2c619bf76982b8417f44fbecc4 +Author: SteveInUQ +Date: Mon Nov 1 13:26:19 2021 +0800 + + Update introduction + +commit b9fecbbbe7a060fddf330ef4173b4db319b54481 +Author: Carrick <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 15:26:17 2021 +1000 + + Update README.md + +commit d1a6282f197b9a216782d76b1cb93494f736501b +Author: Michelle Menesch +Date: Mon Nov 1 15:25:28 2021 +1000 + + Added the image files to be used in the README.md + +commit 4dc99c73faf9f390c415ee8366888f929f031fe3 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 15:24:55 2021 +1000 + + Clean up + +commit 20cc8a2e41653792dfd4e5e864c3e0a33d582a25 +Author: Michelle Menesch +Date: Mon Nov 1 15:24:48 2021 +1000 + + Added the SSIM code to driver.py. Completed all functionality and tested it works (as expected). + +commit 97cca68ab761555db6dd6c68e77c38937cc35552 +Author: Michelle Menesch +Date: Mon Nov 1 15:23:58 2021 +1000 + + Completed the README.md file. + +commit 525cedb18380150ace5b73d46636ddd220c89368 +Author: d7a7 +Date: Mon Nov 1 15:23:55 2021 +1000 + + Delete model.ipynb + + This is being removed to clean up submission folder, since it is not necessary for running driver.py. + +commit 705cb84dcb8db9c60df3e860c15fe12e8f03b8e2 +Author: d7a7 +Date: Mon Nov 1 15:23:45 2021 +1000 + + Delete Data_loading.ipynb + + This is being removed to clean up submission folder, since it is not necessary for running driver.py. + +commit 66239bd64cf5c4171911273132cce7ac44c17dbe +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Nov 1 15:23:24 2021 +1000 + + Issues Section + +commit 43a7b270b208da203d0baee8b1b760f3b33cd776 +Author: SteveInUQ +Date: Mon Nov 1 13:22:00 2021 +0800 + + Image for describe GCN process for README file + +commit 0bd94f009067ab2ff1226c100e65f9035909ff90 +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Nov 1 15:21:59 2021 +1000 + + Reformatted Images + +commit 356c5d1b74a9ca3152253c6dacab1482079403e5 +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Nov 1 15:21:14 2021 +1000 + + Added Images + +commit 9e157c412f4fce7fab28db626b045f83076d507a +Author: Muhammad Wildan Aziz +Date: Mon Nov 1 15:20:18 2021 +1000 + + Edit plot and add readme file + +commit 7af8731e7a055367607665dc0bec33b0d15c8729 +Author: EvaHolden <92071079+EvaHolden@users.noreply.github.com> +Date: Mon Nov 1 15:20:04 2021 +1000 + + Update README.md with images. + +commit 23f278e09f6b775ab81905dd66457492227c14f0 +Merge: c9f3ddb5 3000f23c +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 15:19:51 2021 +1000 + + Merge remote-tracking branch 'origin/topic-recognition' into topic-recognition + +commit c9f3ddb5d2de47086214f27260d3fc68ace49735 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 15:19:21 2021 +1000 + + Add training of prior to the driver script + +commit 14abfccf43ac9906fb872e9fb68a79420c77441c +Author: Muhammad Wildan Aziz +Date: Mon Nov 1 15:19:19 2021 +1000 + + Add plot + +commit 07ed5060e2929789937234bfa0fc21934abc5f78 +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Nov 1 15:19:10 2021 +1000 + + Updated Readme + +commit 2d9c5d0808bb46ba4b6cb3cd95acc53578dd22af +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Nov 1 15:18:35 2021 +1000 + + Finished Readme and Fixed Driver missing import + +commit 848d449f5cd8cfb39ced68950dfd73d10e5eb1ac +Author: Khac Duy Nguyen +Date: Mon Nov 1 12:17:53 2021 +0700 + + Change param + +commit 90defd41d6506b2fc66f02b63ea1729589110ad5 +Author: d7a7 +Date: Mon Nov 1 15:17:36 2021 +1000 + + Update README.md + +commit dd326d4c22f3080b08b78423f932738b6ec472c3 +Author: ByronDowney <88473528+ByronDowney@users.noreply.github.com> +Date: Mon Nov 1 15:16:55 2021 +1000 + + Fixed README formatting issues & removed comments + +commit d9e24b2b41a1f8d1e14f6078b6d390544087e7ac +Author: JoeHolownia +Date: Mon Nov 1 15:16:09 2021 +1000 + + Final commit, adding images and cleaning up readme. + +commit a8228ef90bfb3eddd8ff1c8c6dc8f420191a355e +Author: d7a7 +Date: Mon Nov 1 15:12:20 2021 +1000 + + Update README.md + +commit da9bbd169bb059452f334e203b68681f9b3497b3 +Author: ByronDowney +Date: Mon Nov 1 05:10:53 2021 +0000 + + Committed Image files to be used by README + +commit 4c7e17f760d5ae91a7638fda9b43bd39b7350907 +Author: d7a7 +Date: Mon Nov 1 15:09:45 2021 +1000 + + Update README.md + +commit 30eae3e7bfe1eae2aebae6b6ffe9fc389b059f90 +Author: d7a7 +Date: Mon Nov 1 15:09:01 2021 +1000 + + Update README.md + +commit ab53df0ab05ed251a551d69f495f18e776d0a2fa +Author: ByronDowney +Date: Mon Nov 1 05:08:42 2021 +0000 + + Added most of the contents from Model.py, such as pre-processing, fitting, visualisation. Model.py now only contains the keras structure of the model + +commit 0817516757db034fbe723cc3990035d7553bef71 +Author: ByronDowney +Date: Mon Nov 1 05:08:39 2021 +0000 + + Completed the README file. Contains information about the ISICS dataset, Unet, and some results. + +commit 4034fb7f78fad57451a7da7044bc4e92068f154d +Author: ByronDowney +Date: Mon Nov 1 05:08:24 2021 +0000 + + Moved most of the contents of Model.py to Driver.py. Model.py now only contains the keras structure of the model + +commit 3000f23c87f4f94b624f88a5795a06a6f7c6103c +Author: Carrick <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 15:07:39 2021 +1000 + + Update README.md + +commit 3afc2651fdd9d3cf464260590679fecec4797411 +Merge: ff0cc4ad 5b198703 +Author: borova-siska +Date: Mon Nov 1 15:07:22 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/borova-siska/PatternFlow into topic-recognition + +commit ff0cc4ad130d5d6c71fc6f9a5737175080f423b3 +Author: borova-siska +Date: Mon Nov 1 15:07:08 2021 +1000 + + fixed restore_model.py + +commit 7b2e328036cb1aaf57fd83e00b26f5ef70f6108a +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Mon Nov 1 15:06:43 2021 +1000 + + Cleaned up comments in model, driver and removed unneccesary y data from data loaders + +commit 18cae146a0516d7c13b7eac478420bd6c6347ea9 +Author: Joshua Lee <37468566+leecwj@users.noreply.github.com> +Date: Mon Nov 1 15:05:58 2021 +1000 + + report updated with results + +commit 48a1d8546125c80864d756eb8d710c765a0d7fe6 +Author: EvaHolden +Date: Mon Nov 1 05:05:10 2021 +0000 + + Included the images + +commit 779188f8fe6377d31477fcbef0e769c2dc5a7822 +Author: Muhammad Wildan Aziz +Date: Mon Nov 1 15:03:39 2021 +1000 + + Add node embeddings and reformat code + +commit 54faa46bc34db671719537f68f79665982add974 +Author: EvaHolden +Date: Mon Nov 1 05:03:16 2021 +0000 + + Added plots for the accuracy and loss, finalised other details + +commit f883064408c2fad92bd246b5f02b2bc13f2d860c +Author: EvaHolden +Date: Mon Nov 1 05:02:39 2021 +0000 + + Included details of the loss in README.md + +commit 349197b5f22ecc2b5fc6c7ea5c8e9524c8aa0bd5 +Author: d7a7 +Date: Mon Nov 1 15:02:16 2021 +1000 + + Update README.md + +commit 564f42c48d866c14a56fa07638885f0ba0c25cc0 +Author: Xue Zhang +Date: Mon Nov 1 12:59:23 2021 +0800 + + Update README.md + +commit 4c7ad8813c82266cd3938fbc5bd2007e3df7c76d +Author: Khac Duy Nguyen +Date: Mon Nov 1 11:57:51 2021 +0700 + + Reduce param + +commit 4d7fd7a32ce5f5ff1e6b1100bcbaa209be9cf6fc +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 14:57:22 2021 +1000 + + resolution images + +commit e21b238907bf71b01cdf661d205f4680b0ff96c7 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 14:57:08 2021 +1000 + + Create sample256.png + +commit 5deccab7cd8da489f309b26776f943ef447d3e6f +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 14:57:04 2021 +1000 + + Create sample128.png + +commit 8238c4fd687193b6f637e809e24afa8c7449a58e +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 14:56:59 2021 +1000 + + Create sample64.png + +commit 34b958856bc17e6c7332222a958e555e55b17aab +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 14:56:56 2021 +1000 + + Create sample32.png + +commit 1fcb39c2f2ebfd3d2bb4233992e194a5e36f35bd +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 14:56:52 2021 +1000 + + Create sample16.png + +commit d43d21cb31ad371d5eda5e96d03e727dd9dddf41 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 14:56:45 2021 +1000 + + Create sample8.png + +commit acf53473a9df47b3db0d33b1cf99274550abe3be +Author: wahsnitram <52402028+wahsnitram@users.noreply.github.com> +Date: Mon Nov 1 14:48:51 2021 +1000 + + Update readme.md + +commit bfa503daf2c2ab41af3a83b54c78998561fa1764 +Author: wahsnitram +Date: Mon Nov 1 14:46:43 2021 +1000 + + Added comments + +commit 833c139d77778124a26d069661a12d632e81886b +Author: Khac Duy Nguyen +Date: Mon Nov 1 11:46:10 2021 +0700 + + Change output transformer + +commit 5b1987036597b1fcb48f95b525484a59494ff39f +Author: borova-siska <35324575+borova-siska@users.noreply.github.com> +Date: Mon Nov 1 14:46:02 2021 +1000 + + created empty folder for dataset + +commit 1df3e4b66789665ba543ceea2e2a6921f7b32ea7 +Author: d7a7 +Date: Mon Nov 1 14:45:24 2021 +1000 + + Update README.md + +commit 504b715ea17586a84987f6e8abf73f54ed6803ea +Author: dojster27 <45154205+dojster27@users.noreply.github.com> +Date: Mon Nov 1 14:43:13 2021 +1000 + + update readme with results and bug fixes + +commit ec6e25cf46e018018c5ec7c8b33160dc9032219d +Author: kamenii +Date: Mon Nov 1 14:43:10 2021 +1000 + + Updating README + +commit d650f7ea0ef2f2a7e8b7c23360cb1dd4b13795f6 +Author: Michelle Menesch +Date: Mon Nov 1 14:41:54 2021 +1000 + + Added content to README.md. Added PixelCNN code to model.py and driver.py. Tested using Spyder on lab (78) computer. Moved some pixelCNN code from model.py to driver.py e.g. for training the model. + +commit b4e6237ab513577616a596fc417018d3b0e51a32 +Author: borova-siska +Date: Mon Nov 1 14:41:32 2021 +1000 + + created README.md + +commit ffb617b0bbcf4a40008db00bef4f2f9c58af8dee +Author: borova-siska +Date: Mon Nov 1 14:37:09 2021 +1000 + + renamed train.py, updated restore_model.py + +commit bd5d400880b0e9afb7147bbe1aff0689d6c669a3 +Author: Kirbologist +Date: Mon Nov 1 14:37:07 2021 +1000 + + compiled algorithm into python scripts + +commit 69f3af299180c9ea2f629b6f2527e67631ca85ad +Author: d7a7 +Date: Mon Nov 1 14:36:18 2021 +1000 + + Update README.md + +commit bedd873ca63d9d7ceb89767b7d6c31f5848aa78e +Author: d7a7 +Date: Mon Nov 1 14:35:50 2021 +1000 + + Update README.md + +commit bdb34ce1f9dd28c86bc3e5a20a62cb5a2ebe9f1d +Author: wahsnitram <52402028+wahsnitram@users.noreply.github.com> +Date: Mon Nov 1 14:35:46 2021 +1000 + + readme updated with more information and figures + + Information about the dataset and overall architecture of the model implemented has been included. + +commit b82a636da2fb6604296d4aa81597ed42244f5911 +Author: Jason +Date: Mon Nov 1 14:34:23 2021 +1000 + + improved code of model.py, + added driver.py for data reading + +commit ccd70472c7bc8e34cfd5b6cb33af221e18256d1f +Author: Khac Duy Nguyen +Date: Mon Nov 1 11:34:09 2021 +0700 + + Fix Upper case + +commit 0993223e1e9d6a02eee7974786b49192345bbad3 +Author: d7a7 +Date: Mon Nov 1 14:34:03 2021 +1000 + + Update and rename Readme.md to README.md + +commit 441c8c4249d61a47d985beea0bd462babdee0c9e +Author: zaragolshani <93324701+zaragolshani@users.noreply.github.com> +Date: Mon Nov 1 15:33:27 2021 +1100 + + updated the parameter forbbox_max_class_trs funct + +commit 3d014bffafbc59471385eb18b566cafb26478f9a +Author: wahsnitram +Date: Mon Nov 1 14:31:37 2021 +1000 + + Fixed segmentation layers + + Fixed segmentation layers to properly align with paper specifications + Realised concatenates were actually meant to be there. + +commit 9dc4fbe3ab5f2cf6f6e586a5c33aa9f9b62a1f7a +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Mon Nov 1 14:31:16 2021 +1000 + + Cropped some figures + +commit 7983492d5a3bf367257b58a6440f986b7cc956e7 +Author: borova-siska +Date: Mon Nov 1 14:30:19 2021 +1000 + + made code more functional and added docs + + Also added images of model performance. + +commit c70d77492921af7f8e29982dc335da9ec720e995 +Author: d7a7 +Date: Mon Nov 1 14:28:58 2021 +1000 + + Draft of Readme from computer. + + To be completed in github editor. + +commit 91dae11234e308a538aea5026fe8952c0321add6 +Author: EvaHolden +Date: Mon Nov 1 04:27:11 2021 +0000 + + Finalised README.md + +commit 6bcacc740610d60f1ab98ceace7f0ce140b0aa75 +Author: zaragolshani <93324701+zaragolshani@users.noreply.github.com> +Date: Mon Nov 1 15:26:36 2021 +1100 + + the nms_thres is updated + +commit 360321fe46a5b1428c83a4ce5213c1c5b59a0a41 +Author: Khac Duy Nguyen +Date: Mon Nov 1 11:25:50 2021 +0700 + + Documentation + +commit 333fdff22d191b4905eae438cbaaacf9d14ecff7 +Author: Aryaman <58369369+aryaman4152@users.noreply.github.com> +Date: Mon Nov 1 14:25:43 2021 +1000 + + Fixed references and formatting + +commit a1e768076869fe642bb4108536b25ba7ca4894c9 +Author: EvaHolden +Date: Mon Nov 1 04:25:12 2021 +0000 + + Improved commenting + +commit b542519d3b45308603426b8f2a4afd382e411f7d +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Mon Nov 1 14:24:50 2021 +1000 + + Updated README and added images + +commit 6e31ac3033fa592f7a3a1521ee0a7a12e6025f86 +Author: zaragolshani <93324701+zaragolshani@users.noreply.github.com> +Date: Mon Nov 1 15:24:06 2021 +1100 + + updated the main driver running instructions + +commit 479b776027ffd836d5b4c014e67d3ac2ca474604 +Author: d7a7 +Date: Mon Nov 1 14:23:08 2021 +1000 + + Completed Final Run and converted to driver.py file + + driver.py contains the same code that was in data_loading.ipynb but + converted and cleaned up to be a single python file designed to run the + model and print examples of the predictions. + This should be the final commit prior to readme being done on github. + +commit dc529ec30bd3175cdf6e314b40048f85a53cf944 +Author: Avinash Chandra +Date: Mon Nov 1 14:23:05 2021 +1000 + + Added README.md and Generated-img folder + +commit ee2deffe930bcd2f69ca0d051c2c2247a41d9c27 +Author: RobEldo <43310214+RobEldo@users.noreply.github.com> +Date: Mon Nov 1 14:22:30 2021 +1000 + + Compiled functions into helper file + + Converted file structure to run from internally saved models, and split the main functions into main_functions.py. + +commit 3233b6fb23c2fa915d5dd97190bf194504cfec08 +Merge: d81d4b60 88d4d389 +Author: wahsnitram +Date: Mon Nov 1 14:21:58 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/wahsnitram/PatternFlow into topic-recognition + +commit d81d4b609a876b23bd6fe48ebcf454d25a7ee6c1 +Author: wahsnitram +Date: Mon Nov 1 14:21:53 2021 +1000 + + Fixed all Add calls + + Changed concatenate calls to add + Fixed all add calls + Downsampling now accepts different stride sizes + +commit 067083bbc08f1c1afefd71b756e735fa83d2f406 +Author: s4581614 +Date: Mon Nov 1 14:21:29 2021 +1000 + + Added parameters to driver and started readme + +commit c5c433c39fea285fe248210c236d2917c0b625ba +Author: Aryaman <58369369+aryaman4152@users.noreply.github.com> +Date: Mon Nov 1 14:21:26 2021 +1000 + + Added model overview to README + +commit 5557593b4ac37050f23b1572fbd2ae9bc03a4a5f +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 14:21:00 2021 +1000 + + Create real_images.png + +commit dbb2c11774c0f63ebb107c7a30aa53d377f45ca4 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 14:20:39 2021 +1000 + + usage + +commit c74eeaebaf0595104e182273efeb7240b2cd0206 +Author: dojster27 <45154205+dojster27@users.noreply.github.com> +Date: Mon Nov 1 14:20:18 2021 +1000 + + adding readme and bug fixes + +commit 997390e25279993b5d0bca8e8fff637a5f7835b9 +Author: zaragolshani <93324701+zaragolshani@users.noreply.github.com> +Date: Mon Nov 1 15:19:07 2021 +1100 + + Update README.md + +commit 384f9fcfc45af8108442ac3ff8e114205207e7f2 +Author: MMMMMYY <90254264+MMMMMYY@users.noreply.github.com> +Date: Mon Nov 1 14:18:44 2021 +1000 + + Update readme.md + +commit 6fbd33c52429cf05284f4116b20dc098034c892f +Author: zaragolshani <93324701+zaragolshani@users.noreply.github.com> +Date: Mon Nov 1 15:18:24 2021 +1100 + + a test result image is added + +commit a64e78bd3aaed85d6465e1d857ad24b94dd79b8a +Author: MMMMMYY <90254264+MMMMMYY@users.noreply.github.com> +Date: Mon Nov 1 14:17:51 2021 +1000 + + Update readme.md + +commit 28c37fc0c68f22be63997b73d74f8edae1f6a49c +Author: xiaofangchen +Date: Mon Nov 1 11:14:35 2021 +0800 + + update readme and add model training image + +commit 876cb1a79e9c8ddcf26f5dd7937d2b6d13c446cb +Author: zaragolshani <93324701+zaragolshani@users.noreply.github.com> +Date: Mon Nov 1 15:16:49 2021 +1100 + + added a test result image + +commit 2ca000cb059a74ec271790ee6b8d9b6579c1c557 +Author: Richal Verma +Date: Mon Nov 1 14:15:25 2021 +1000 + + Fix readme formatting + +commit 74defa864d0cc4e0f6019d6a7ef9f6f5b16bf8b8 +Author: MMMMMYY <90254264+MMMMMYY@users.noreply.github.com> +Date: Mon Nov 1 14:14:12 2021 +1000 + + Update readme.md + +commit 2e62efe038853c70c51d54446be159392eec8fd8 +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Nov 1 14:13:55 2021 +1000 + + Fixed missing variables and missing function errors + +commit b891580b09bc51286938e5aea743b89ac2f4ab36 +Author: MMMMMYY +Date: Mon Nov 1 14:11:50 2021 +1000 + + update different loss function output + +commit 2915c352a2e2a3f546b5ad23227343870c05b002 +Author: Kirbologist +Date: Mon Nov 1 14:04:18 2021 +1000 + + Training complete, some results produced + +commit 122fb7cd221a1c0741c65db0ba209598c1c893d0 +Author: Avinash Chandra +Date: Mon Nov 1 14:00:54 2021 +1000 + + Added comments in StyleGAN and trained on the OASIS brain dataset + +commit 1b19d3312eb8d8347b0e11622dc0ddd3924da0b1 +Author: borova-siska +Date: Mon Nov 1 13:53:52 2021 +1000 + + split model and train + +commit 6bbadcc4f189fd400a4dcab9a6bde458c129abc1 +Author: borova-siska +Date: Mon Nov 1 13:49:00 2021 +1000 + + added own unet3d model + + Changed block comments to inline, looks cleaner? Added some formatting. Removed segmentaiton_models_3D and created my own. Fixed dice coefficient. + +commit 809e0ab7b822e52522b1d79732f1f90d1dfcebe1 +Author: 周脆脆 +Date: Mon Nov 1 13:45:56 2021 +1000 + + split files in s4571084 + +commit 88d4d389baf039a944aef799e2358b4de3e98ab6 +Author: wahsnitram <52402028+wahsnitram@users.noreply.github.com> +Date: Mon Nov 1 13:42:30 2021 +1000 + + Uploaded example images from the datset + +commit 34e10e54175d58470bc6cb821ec42abeb56b9dfd +Author: Khac Duy Nguyen +Date: Mon Nov 1 10:40:35 2021 +0700 + + Refactor code + +commit 40acc1ee56cd5856989edbb6ae7400ec129ae5a5 +Author: wahsnitram <52402028+wahsnitram@users.noreply.github.com> +Date: Mon Nov 1 13:34:52 2021 +1000 + + Uploaded image of network architecture + +commit 0a45ea7d6f57ea2dc4e0a71e05cc0c82cdf522c5 +Author: kd9911 <92525563+kd9911@users.noreply.github.com> +Date: Mon Nov 1 13:33:35 2021 +1000 + + added ordered list + +commit a4c142b40562ec16b34f12d016fc44edcf71e71a +Author: wahsnitram <52402028+wahsnitram@users.noreply.github.com> +Date: Mon Nov 1 13:32:57 2021 +1000 + + Created figures folder + +commit 22b207aca05305bb6d977dccdb91c7bfbf3f8e63 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 13:31:48 2021 +1000 + + Update README.md + +commit d5b6e0c37b9b02f8ddcf3f366f504efd4733a8ed +Author: wahsnitram <52402028+wahsnitram@users.noreply.github.com> +Date: Mon Nov 1 13:28:53 2021 +1000 + + Corrected title, added dependencies and + + Committed so figures can be added to the repository. + +commit cd215e7b8b5c0a2013f465b69e578ea1a5b9471d +Author: Lee Jian Yang +Date: Mon Nov 1 13:28:22 2021 +1000 + + missing images has been added + +commit 62955fa8581e4d4bb5d9de173e59999a4ec790cf +Merge: a5850990 4eabb3e3 +Author: Korbin Daly +Date: Mon Nov 1 13:27:59 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/kd9911/PatternFlow into topic-recognition + +commit 4eabb3e3eb01eee413397b5e66ae6dea6d51a807 +Author: kd9911 <92525563+kd9911@users.noreply.github.com> +Date: Mon Nov 1 13:27:36 2021 +1000 + + Used github markdown to neaten up the README + +commit 1630b9217da436bbabac00e20218f312dcdce6e0 +Author: d7a7 +Date: Mon Nov 1 13:25:45 2021 +1000 + + Changed accuracy metric to binary accuracy. + + Changed the tracked accuracy metric to binary accuracy. + + Todo: Complete a 15 epoch training and configure data_loading to + driver.py. + +commit 094c19b42f9c6714d1a4ecd927c4cbb4d4851f4c +Author: Michelle Menesch +Date: Mon Nov 1 13:23:54 2021 +1000 + + Moved the VQ and VQ Trainer classes to model.py + +commit f7e8978429b7f752fd180567feb5d299abf142db +Author: dojster27 <45154205+dojster27@users.noreply.github.com> +Date: Mon Nov 1 13:22:10 2021 +1000 + + commenting and bug fixes + +commit d32e0702e9b5a730a7fb0e0f2747084edc67e430 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Mon Nov 1 13:21:19 2021 +1000 + + Update README.md + +commit 680f78926433f1b6ce4e49de230faeeb3714f7be +Author: wahsnitram <52402028+wahsnitram@users.noreply.github.com> +Date: Mon Nov 1 13:17:24 2021 +1000 + + Create readme.md + + Created with a title! + +commit a813ecc5d790c56d5d78fdba76deaf88a626e93b +Author: dojster27 <45154205+dojster27@users.noreply.github.com> +Date: Mon Nov 1 13:13:08 2021 +1000 + + history plotting and fixing files + +commit 04fdf67f8c7ebc98d75ea9eb8f9ab8a15909b049 +Author: Kirbologist +Date: Mon Nov 1 13:11:47 2021 +1000 + + Due to difficulties getting YOLO working, task has been switched to q1. Preprocessing complete + +commit deac8887050d370f30c82d91172e12a2cfd29fe6 +Author: dojster27 <45154205+dojster27@users.noreply.github.com> +Date: Mon Nov 1 13:11:38 2021 +1000 + + full model + +commit f3df716f75298f0cabfb4ea721df5bbfeec21e01 +Author: kamenii +Date: Mon Nov 1 13:07:29 2021 +1000 + + Added another DiscriminatorBlock to disriminator. Added missing parameter align_corners to interpolate in discriminator. + +commit b3df7c988764eab89ca7af9c8d3777f0d09351d0 +Author: RobEldo <43310214+RobEldo@users.noreply.github.com> +Date: Mon Nov 1 13:07:07 2021 +1000 + + Added new models - final time + + Added the final models, however, the generation is unreliable and only sometimes provides generative characteristics. + +commit 267f46823b8b945ce701e2fa5d04f1e854458de6 +Author: Muhammad Wildan Aziz +Date: Mon Nov 1 13:06:56 2021 +1000 + + Add training + +commit 0f4c016d324ff3c90bd82caffb749a869963655a +Author: wahsnitram +Date: Mon Nov 1 13:05:17 2021 +1000 + + Removed more unnecessary imports from unet.py + +commit 43df8945660cba803675932dd2e9f8d65c65bf25 +Author: Zhien Zhang +Date: Mon Nov 1 13:04:53 2021 +1000 + + Add test script and update the readme + +commit ad760d38ff64dd57614d11785bc7956564ed78be +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 1 13:03:48 2021 +1000 + + Create Model2.py + +commit a58509901954cbe4d9c37bf1aad4105fb282d9af +Author: Korbin Daly +Date: Mon Nov 1 13:02:44 2021 +1000 + + Cleaned up and added more comments + +commit 1f3a08c9fa8b56a8fb93ccf7a4a7120e7d220ea1 +Author: Khac Duy Nguyen +Date: Mon Nov 1 10:02:31 2021 +0700 + + Update Readme + +commit 864455ff6e87340e8c0fe4bf5e8eda34685e1c1f +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 13:00:57 2021 +1000 + + Jupyter notebooks used for training and visualization + +commit 090258f8d816d7f98ba2317b5782859a821f1a02 +Author: Kirbologist +Date: Mon Nov 1 13:00:57 2021 +1000 + + preproccessing successful, training started (trained using third party software) + +commit 382aa7eb1ff2bb60db54cd22a7ef3d8b978ccaa0 +Author: Zhien Zhang +Date: Mon Nov 1 12:59:19 2021 +1000 + + Fixed typos + +commit c2f3305e43c203d497ebc80c364eca0579587159 +Author: Khac Duy Nguyen +Date: Mon Nov 1 09:58:12 2021 +0700 + + Add readme.md + +commit 80ab6fa8a7cc0c68ca19de7d9ee6214266af0094 +Author: Lee Jian Yang +Date: Mon Nov 1 12:56:43 2021 +1000 + + final touches to preprocessing pipelin + +commit c0dfcde5a883570609174e54e47e86c0c26b7a78 +Author: Muhammad Wildan Aziz +Date: Mon Nov 1 12:55:20 2021 +1000 + + Reformat code + +commit 448598b8a22fd49a3af2a3e59ba0e4061f49da8c +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 12:54:34 2021 +1000 + + Add visualization helper methods + +commit f2c113c76fe0af46c15f74f1af6f27e1b809cf26 +Author: Joshua Knowles +Date: Mon Nov 1 12:53:49 2021 +1000 + + Add block comment to top of files + +commit 36f3b5fb404a7ce7da1c703a81d81ec5f918b249 +Author: wahsnitram +Date: Mon Nov 1 12:52:48 2021 +1000 + + Basic methods for calculating dice coefficients implemented + + dice_coefficient and dice_coefficient_loss implemented for future use. + +commit a919c283a8101e2a2812f29511640da4db76fa3b +Author: dojster27 <45154205+dojster27@users.noreply.github.com> +Date: Mon Nov 1 12:52:32 2021 +1000 + + adding transformer + +commit 53ff9f1a828e2135c18de22368fcc5e954e058db +Author: Kirbologist +Date: Mon Nov 1 12:52:12 2021 +1000 + + Revert "initial commit afte re-cloning, model training complete" + + This reverts commit f6ad3424be0f15fb387170f94e320a6407840e4e. + +commit fcf7a80d536c693ffa1952f311c417ac3c027a20 +Author: Lee Jian Yang +Date: Mon Nov 1 12:51:14 2021 +1000 + + removed 11 images of original and mask, used for testing data preprocessing before + +commit 28a46cf9a91af07aca466244ae6570819f38b42a +Author: Lee Jian Yang +Date: Mon Nov 1 12:50:15 2021 +1000 + + readme done + +commit f963bdc25b36ee31a9c90d2b9f769e7267c8a783 +Author: Zhien Zhang +Date: Mon Nov 1 12:47:59 2021 +1000 + + Add comments to MinibatchStdev + +commit b0c353e92fdf16709fd98346bf968c9b4fd9df5a +Author: dojster27 <45154205+dojster27@users.noreply.github.com> +Date: Mon Nov 1 12:47:06 2021 +1000 + + adding constants cross attention + +commit 6d47d9f94770537444c7c9693ffa35a44bd070d5 +Author: Chen.XF <54491423+xiaofangC@users.noreply.github.com> +Date: Mon Nov 1 10:46:04 2021 +0800 + + Delete recognition/unet3d/results/models directory + +commit ff767092b51584b56e00ee40fcfa723caedf223f +Author: Lee Jian Yang +Date: Mon Nov 1 12:45:51 2021 +1000 + + finalising read me file + +commit 77dc3c82d35b68711c9d2c5b004da55cfdef428a +Author: Jason +Date: Mon Nov 1 12:43:41 2021 +1000 + + First working model + +commit 037da932bbdf818f4b39461e7de66ed40c3d209f +Author: d7a7 +Date: Mon Nov 1 12:39:23 2021 +1000 + + Fixed issue data gen bug and improved formatting to visualisation. + + The issue with the wrong validation split arguments mention in the last + commit has been fixed. A preliminary training run of the model with the + fixed testing/training splits has been completed with 5 epochs, a + training dice coefficient of 0.78 and a testing of 0.87. These results + indicate a longer more complete training run will produce good results. + + Improved formating of the data visualisation, removed usage of grispec + and added titles, xlabels, and improved spacing on all plots. + + Todo: Still need to look at the accuracy metric, if it has no obvious + fix I will remove it. + Complete a 10-15 epoch training run. + Create driver.py from data_loading.ipynb + Submit + +commit 36b77a1d01e90d1d1ac693d8dad4aa21f1cbdbe8 +Author: RobEldo <43310214+RobEldo@users.noreply.github.com> +Date: Mon Nov 1 12:38:27 2021 +1000 + + Add information on algorithm dependencies + + This section was designed to justify the use of numpy for training the pixel_cnn class during fitting. + +commit e72c41bfa8b5a1905a6613c4a74a223413a23fa0 +Author: dojster27 <45154205+dojster27@users.noreply.github.com> +Date: Mon Nov 1 12:38:22 2021 +1000 + + PatchEncoder + + Doing encoding based upon + "Image classification with Perceiver" + from keras webite + +commit 70d557e6913ff8236d48023a7198da6e8168dbbe +Author: dojster27 <45154205+dojster27@users.noreply.github.com> +Date: Mon Nov 1 12:35:03 2021 +1000 + + Feed forward and Patching + +commit c0af3e62a670a2fad98a72bd1efdd1f3d42aa32f +Author: MMMMMYY +Date: Mon Nov 1 12:34:11 2021 +1000 + + update readme, add more details about Stylegan structure + +commit 9ff993c54802b061423ef9b59179357db636ca16 +Merge: 58a5a539 fa6dbffe +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 12:33:44 2021 +1000 + + Merge remote-tracking branch 'origin/topic-recognition' into topic-recognition + +commit 58a5a539d9bf8daaa2c27f4ea1f5e86a5b921ac4 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 12:32:47 2021 +1000 + + Add vqvae structure graph + +commit 6d0e536105d29b22ea9dc783f37dc7947da44845 +Author: wahsnitram +Date: Mon Nov 1 12:32:35 2021 +1000 + + Adding upscaling part of model + + Added upscaling to the end of the model, completing the model + +commit 7c281e7536900548ca7e0bc775fdd8a47322a004 +Author: dojster27 <45154205+dojster27@users.noreply.github.com> +Date: Mon Nov 1 12:31:53 2021 +1000 + + Create perceiver and import data + +commit fa6dbffe0683c78203513cc243319f99e673d847 +Author: Carrick <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 12:30:45 2021 +1000 + + Update README.md + +commit 4b6e17a490e6c3870dcb7743980374c91b046fe7 +Author: dojster27 <45154205+dojster27@users.noreply.github.com> +Date: Mon Nov 1 12:28:38 2021 +1000 + + Alter data processing + +commit d67c1f74b3a41568769022cc4a5336614e3cb25d +Author: Chen.XF <54491423+xiaofangC@users.noreply.github.com> +Date: Mon Nov 1 10:26:18 2021 +0800 + + Delete data_exploration.ipynb + +commit f81f92f6842ccb6efc49879761ecdfded0ee9087 +Author: Chen.XF <54491423+xiaofangC@users.noreply.github.com> +Date: Mon Nov 1 10:24:39 2021 +0800 + + Delete .gitignore + + delete .gitignore + +commit 5b0af673da85e5bf5e19048d48738eb23bd526ef +Author: 周脆脆 +Date: Mon Nov 1 12:16:44 2021 +1000 + + add README.md in s4571084-gcn.py + +commit 4409ddc971246c20f64c5c8d355f7f0008d4888a +Author: Rick W +Date: Mon Nov 1 12:15:19 2021 +1000 + + clean up code whitespace and final readme additions + +commit 08a00e2d853fedeb815937d7289508e3cc1f61c1 +Author: xiaofangchen +Date: Mon Nov 1 10:13:55 2021 +0800 + + update readme + +commit 24103303b699c6cae1c2db8b7f344ab31cf16f3f +Author: 周脆脆 +Date: Mon Nov 1 12:14:45 2021 +1000 + + fix paths of facebook.npz and updaload the facebook.npz in s4571084-gcn.py + +commit ba5bc1d2e89c185d8c7c543d61456602d5254651 +Author: YUJIAN YUAN <93472198+EugeneY2021@users.noreply.github.com> +Date: Mon Nov 1 10:14:36 2021 +0800 + + Update README.md + +commit faba38740baa2d8801749bb52fed30a1c91a16ac +Author: Carrick <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 12:13:34 2021 +1000 + + Update README.md + +commit abfb8cbdd8178c5756cbd8ab066f2f42e027dd54 +Author: xiaofangchen +Date: Mon Nov 1 10:13:34 2021 +0800 + + rename images + +commit 946b3e61a709f5c221179b52b026dfa2743aa17c +Author: YUJIAN YUAN <93472198+EugeneY2021@users.noreply.github.com> +Date: Mon Nov 1 10:11:07 2021 +0800 + + Result image + +commit 957ca004763615a6d8dca13c4755ca0eac62b12c +Author: YUJIAN YUAN <93472198+EugeneY2021@users.noreply.github.com> +Date: Mon Nov 1 10:10:19 2021 +0800 + + Create model and driver + +commit b2224ac83853f646aacf2d007ae6f8652093793b +Author: YUJIAN YUAN <93472198+EugeneY2021@users.noreply.github.com> +Date: Mon Nov 1 10:09:24 2021 +0800 + + Create README.md + +commit 9dd6ea0d87c699e8d4978a8810b24cf373ad86fa +Author: kd9911 <92525563+kd9911@users.noreply.github.com> +Date: Mon Nov 1 13:09:22 2021 +1100 + + Update README.md + +commit 9280ea6bd8b541aa84c6ab0aab9b520ed94c4c94 +Author: wahsnitram +Date: Mon Nov 1 12:08:42 2021 +1000 + + Created basis of model + + Included more imports + Basis of encoding and decoding done + Still requires segmentation + +commit 62c588dbdf5f10e1e731538c78db08ec3f65b7ab +Author: Carrick <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 12:04:27 2021 +1000 + + Update README.md + +commit 2fd9184290abd7d0af92893043e58244ea601b8a +Author: Carrick <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 12:03:49 2021 +1000 + + Update README.md + +commit 9a8b1a1124b674dad8daaafc848a2cc7bcee89d5 +Author: ByronDowney +Date: Mon Nov 1 02:02:55 2021 +0000 + + Adjusted parameters, now calculates length of dataset within the program. Replaced the sigmoid activation function in second last layer with LeakyReLU. Improved commenting in model definition. Changed the learning rate of the adam optimizer to match the Improved Unet paper. Removed early stopping. + +commit 6e848ef1b67656e8a33d6c9674539d5af44df6ed +Author: RobEldo <43310214+RobEldo@users.noreply.github.com> +Date: Mon Nov 1 12:00:42 2021 +1000 + + Loaded models - generation requires further work + +commit 5ebad017f87a556c7c6b7303dd039a74e68f8e27 +Author: Zhien Zhang +Date: Mon Nov 1 12:00:22 2021 +1000 + + Fixed a format typo + +commit 216239db606a63a35ecb63cc72f965e9ad62c70b +Author: Carrick <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 11:59:57 2021 +1000 + + Update README.md + + Add result plots + +commit 874036a091772f9a94e392ca5dc5c3b674c9a429 +Author: Chao-Chun Wu <52982031+white-segfault@users.noreply.github.com> +Date: Mon Nov 1 09:57:32 2021 +0800 + + Finished calling the model plotting the learning curve and prediction of it + +commit 3c4891222f1f3811ed20be8220f00a555373d234 +Author: Zhien Zhang +Date: Mon Nov 1 11:56:34 2021 +1000 + + Upload the images used in readme.md + +commit 6cf4d15239ca04cf0b4ba354a36ac5b69e39b208 +Author: d7a7 +Date: Mon Nov 1 11:55:41 2021 +1000 + + Fixed bug with data loading generators. + + The data from image generators were not splitting images correctly, + there was likely overlap between the test set and the training set. To + fix this I introduced new arguments for the testing generator. Just + realised I forgot to change the validation split argument, will be in + the next commit. + +commit 8bd95324dd571a898d25e449f8a499a75d19bc4f +Author: Zhien Zhang +Date: Mon Nov 1 11:48:34 2021 +1000 + + Add readme.md + +commit 5f193bf32a27bfa9c8ee1630d0b67d449adbf881 +Author: YUJIAN YUAN <93472198+EugeneY2021@users.noreply.github.com> +Date: Mon Nov 1 09:48:25 2021 +0800 + + Delete s4656406-Improved UNet + +commit 992e5aec38d8f74280e984221c1e7208ed774ee1 +Author: Mark Coulon +Date: Mon Nov 1 11:48:14 2021 +1000 + + removed a duplicate image from merge conflict + +commit 152f22e873a44193d5e552c153e41194ad10d4f4 +Author: YUJIAN YUAN <93472198+EugeneY2021@users.noreply.github.com> +Date: Mon Nov 1 09:47:16 2021 +0800 + + Create s4656406-Improved UNet + + test + +commit 845a39d184315edb15ddca5838a05bdb219c0b1b +Author: Bobby Melhem +Date: Mon Nov 1 11:47:10 2021 +1000 + + Added more images and fixed formatting in README + +commit 4e7028e1b3ac1b19283d4b0a88830c4cd2c59957 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 11:46:46 2021 +1000 + + Usage + +commit 371f63cc66c0c4543021d1d7dd5c5143d1bb3f00 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 11:45:53 2021 +1000 + + Create sample_no_mix.png + +commit 80ae2ad95a88f98755897c61ad454ddb0f592774 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 11:45:48 2021 +1000 + + Create mix_style.PNG + +commit c8ce284f5f9fbdcffee767e73f56298a0902f898 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 11:44:23 2021 +1000 + + Add result plots + +commit 39f325b442f92a1d25b561f77cce41cdb3be06d6 +Author: Joshua +Date: Mon Nov 1 11:43:21 2021 +1000 + + Added additional information for Results in README + +commit 41c6fe203e9f619f0c7c54cb00871bb3b952c109 +Author: YUJIAN YUAN <93472198+EugeneY2021@users.noreply.github.com> +Date: Mon Nov 1 09:42:43 2021 +0800 + + wrong location + +commit 94cbeba546708e7b6741a91380be5bd311954059 +Author: YUJIAN YUAN <93472198+EugeneY2021@users.noreply.github.com> +Date: Mon Nov 1 09:42:32 2021 +0800 + + wrong location + +commit fc04bd95a451e58ac1e54aa70423187cb62818cc +Author: Humphrey Munn +Date: Mon Nov 1 11:42:20 2021 +1000 + + fixed spelling in readme + +commit b033db3fac8df55750a719e9425cbce3c08007ec +Author: YUJIAN YUAN <93472198+EugeneY2021@users.noreply.github.com> +Date: Mon Nov 1 09:42:18 2021 +0800 + + wrong location + +commit 2625b817f55a2c17a11399a0bebf0aa83eb47266 +Author: Khac Duy Nguyen +Date: Mon Nov 1 08:41:23 2021 +0700 + + Add transformer kqv + +commit a98b8fefc702a95d2fe5177d463b9001eb69497b +Author: Khac Duy Nguyen +Date: Mon Nov 1 08:40:28 2021 +0700 + + Remove shuffle + +commit f1897de12642bb729b2f2b88e86b317d423302b4 +Author: Khac Duy Nguyen +Date: Mon Nov 1 08:39:57 2021 +0700 + + Remove redundant parts Transformer + +commit 942d4639813a461adb324ff06693ab7ffa7c3488 +Author: Khac Duy Nguyen +Date: Mon Nov 1 08:38:36 2021 +0700 + + Change Projecttion + +commit 882cc6fd1756497f0965433245253b1a79a37f81 +Author: Bobby Melhem +Date: Mon Nov 1 11:29:25 2021 +1000 + + Fixed Typos in Readme + +commit e3747e2c7818a6f24d308facc2b02fd4c7208cca +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 11:28:20 2021 +1000 + + Add result plots + +commit daa93634554a8245a125b55e80465923a66886e7 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 11:20:40 2021 +1000 + + Add argument parser to driver script + +commit 87b772347da8f515608de129990d76fd7d108ac2 +Author: Bobby Melhem +Date: Mon Nov 1 11:15:53 2021 +1000 + + Added readme and images as well as docstrings + +commit 76f501e592e574dc892ec4130f0ab8590fe53946 +Author: Jason +Date: Mon Nov 1 11:15:00 2021 +1000 + + Updated readme.md for Task 1 + +commit 11a7d5d11af0199e648fdb2d3dfe12f8b4891cfb +Author: YUJIAN YUAN <93472198+EugeneY2021@users.noreply.github.com> +Date: Mon Nov 1 09:10:54 2021 +0800 + + create project + +commit 0d00b750a804c4c42d6c3a84c589a45400420fbb +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Mon Nov 1 11:09:10 2021 +1000 + + Planned README file + +commit 65c2da87ac35ddd34f958cb2f3a88f4dad191fb8 +Author: Richal Verma +Date: Mon Nov 1 11:08:00 2021 +1000 + + Update README.md + + - Mention image resizing and why it was done + +commit dd3f727cd19f55182d6b116d00121802d23d5782 +Author: Chegne Eu Joe +Date: Mon Nov 1 09:07:15 2021 +0800 + + Added README and driver code + +commit 07bf42d5fccaebf986a5bc474cfee9930b93f794 +Author: Richal Verma +Date: Mon Nov 1 11:06:27 2021 +1000 + + Update README.md + + - Add some more information to the readme to be more specific about each of the models used and what the specific implementation was + - Add a reference for Vector Quantization + +commit a88cf7cf1728c01aae67d7223f035c00afd7c13a +Author: YUJIAN YUAN <93472198+EugeneY2021@users.noreply.github.com> +Date: Mon Nov 1 09:01:09 2021 +0800 + + fix layout + +commit 55d265300efc75105b614b4c696c4fb328faaaac +Author: YUJIAN YUAN <93472198+EugeneY2021@users.noreply.github.com> +Date: Mon Nov 1 08:59:31 2021 +0800 + + create model + +commit 6e1a2c463a4eeb2385f588fd506e5d3514ec1b9d +Author: d7a7 +Date: Mon Nov 1 10:57:17 2021 +1000 + + Updated test visualisation and implemented test set testing. + + The functions for visualising the predicted masks compared to real masks + were updated and integrated into the main function. The visualisation + function now accurately shows two test images, their predicted masks and + their ground truth masks. + + A function that avaluates the model on the entire test dataset was + implemented and integrated into the main function. This function + performs an evaluation on the entire 20% of all images that were + reserved for testing. It achieved a 0.89 Dice Coefficient score. + + Due to these results, further refinement of the model, augmentation, and + training process is not needed. + + Todo: Improve annotations on test visualisation output and look at why + the data the model['accuracy'] is tracking seems to be not relevant. + +commit 7f051859ee063551bdad89ec3b334ac1056e06cd +Author: Chegne Eu Joe +Date: Mon Nov 1 08:57:14 2021 +0800 + + Removed old folder + +commit e3de204e57089ba65c49e1f0700c3f609587afe3 +Author: Chegne Eu Joe +Date: Mon Nov 1 08:56:42 2021 +0800 + + Moved to new folder + +commit 6bd5ce559fb33de280c6579c32be15ae75f48012 +Author: Joshua Knowles +Date: Mon Nov 1 10:52:18 2021 +1000 + + Final implementation of model + +commit 18c114dfde2652e8b7a98778aecfc8eb8a379e39 +Author: Joshua Knowles +Date: Mon Nov 1 10:51:32 2021 +1000 + + Add test script + +commit 5929a91dedaf77a3160543f05e403199050d163e +Author: Joshua Knowles +Date: Mon Nov 1 10:49:39 2021 +1000 + + Update README.md and add images + +commit 31aba9a13c97d45ffb01e751620b28961136c023 +Author: YUJIAN YUAN <93472198+EugeneY2021@users.noreply.github.com> +Date: Mon Nov 1 08:44:59 2021 +0800 + + s4656406 UNet + + test + +commit 209abfb6374a9a2a2d3d381704767fb7e584db86 +Author: SteveInUQ +Date: Mon Nov 1 08:42:49 2021 +0800 + + Wrtite README.md file to finish the project + +commit 52e7884d11da34bdd6a89b3fa05fe4c427c73e6f +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Mon Nov 1 10:29:58 2021 +1000 + + Some fixed I forgot to commit + +commit 854a62b9fd3abb21688168d3ac4b8d70629afe27 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 10:29:19 2021 +1000 + + modify comments + +commit df756614129a78db613f3b269f91405c49fb3115 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 10:29:02 2021 +1000 + + Update README.md + +commit fab152bda18f4d7e43d7ca5e24e627510c49b898 +Author: RobEldo <43310214+RobEldo@users.noreply.github.com> +Date: Mon Nov 1 10:22:41 2021 +1000 + + Merged to computer for model upload + +commit 9377b80e8cf4c3dc3ca67d69ee6f714e4d79ffd8 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Mon Nov 1 10:12:09 2021 +1000 + + Add test.py for implementing the algorithms. + +commit 0c51f2aa4b1bd2c7ddcec13ac148521a92d16ae7 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Mon Nov 1 10:09:42 2021 +1000 + + Finish README.md + +commit 0aca54382a6976628b921880c0bb6e499d0d3f95 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 10:02:39 2021 +1000 + + Add train help method for training pixelcnn prior + +commit 31410d25c0cc7344086680d54e2a6460f4497b25 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Mon Nov 1 10:00:07 2021 +1000 + + add ground truth image and prediction image + +commit 8cd4b9d442f1548844d623df174aed9541db24ff +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 09:59:19 2021 +1000 + + Add gated pixelcnn module + +commit 49e1b0d22ac39d726cf38b456b48f5dad920689c +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Mon Nov 1 09:58:00 2021 +1000 + + add ground_truth.png and prediction.png + +commit 91ea45ad5cf05d936b6508a3be0709624cb20548 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 09:57:50 2021 +1000 + + Add gated&masked conv2d layer module + +commit 3763e05e384312cd9c592692576dac5d556703b4 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Mon Nov 1 09:57:04 2021 +1000 + + add evaluation curve. + +commit 5191ab44a7555ead3daf291dde05f951dc075e38 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 09:56:13 2021 +1000 + + Add gate module + +commit af2f94c5bdf426809daadfe75e568707cc70607c +Author: xiaofangchen +Date: Mon Nov 1 07:56:02 2021 +0800 + + add model + +commit 4436e4d87c4de016df52d3cb19a175bb68e6252a +Author: Tony +Date: Mon Nov 1 09:54:26 2021 +1000 + + Re-added model flow diargem. + +commit 575870e83ec7a88fd65a485eab8413d785448dfc +Author: xiaofangchen +Date: Mon Nov 1 07:51:22 2021 +0800 + + update path + +commit 63bca6766dc44e78cdbe5845e95c9b244ad7aab0 +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Nov 1 09:51:14 2021 +1000 + + Added Shuffle Directory Function + +commit 309821758e215cd3b7210218d5b5176a2dd4cf99 +Author: xiaofangchen +Date: Mon Nov 1 07:48:37 2021 +0800 + + add results of predicted lables + +commit 57c045728f9420683c670779d6a42a188ff993a3 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Mon Nov 1 09:47:02 2021 +1000 + + add evaluation_curve.png + +commit 0b012c0fceb903c0c2e6861ad0d4313e419307c0 +Author: Kristian Thomassen +Date: Mon Nov 1 09:43:35 2021 +1000 + + Fix argument parse type of pcnn-epochs + +commit 03920f46a210d193e367c2dfec34da1c1794e601 +Author: Chegne Eu Joe +Date: Mon Nov 1 07:35:28 2021 +0800 + + Weird vanishing gradient fix + +commit 2a0f1d0a0c2ac661148c93071e0bcc7802016f14 +Author: Rick W +Date: Mon Nov 1 09:20:28 2021 +1000 + + Increase image resolution for clarity + +commit 105a8c1db9bc19a55184cede1226f2274b655132 +Author: Tony +Date: Mon Nov 1 09:13:48 2021 +1000 + + Final cleanup + +commit 91d0205d412843e9c8e11f25243d1fc0a803ad6a +Author: Tony +Date: Mon Nov 1 09:12:58 2021 +1000 + + Add licence + +commit edb9733abad43aaed84895f0c23490585259c6c6 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 08:59:04 2021 +1000 + + Create stylegan_generator.PNG + +commit 9bfbf46af9190f960f6dd10833ecb7d04c7569f6 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 08:58:56 2021 +1000 + + comments on train.py + +commit fc923e7747b93ba774f529018ff60d37ed62600a +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 08:58:34 2021 +1000 + + comment on model.py + +commit 36436d027745e42680a426807672a9d935a34bf9 +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Mon Nov 1 08:52:57 2021 +1000 + + Added code for geenrating images form pixelcnn + +commit 2cfcffb06bbb5be1d298af4ce59e1130d90e5ce7 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 08:51:11 2021 +1000 + + Update README.md + +commit a6498bb07fde4d1d08619df81f599565533ddfa4 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 08:51:07 2021 +1000 + + Create IN.png + +commit 3577ee8ba38982792df147b2799f9af4b97ee0da +Author: Kristian Thomassen +Date: Mon Nov 1 08:36:28 2021 +1000 + + Add more info about VQVAE and PixelCNN in README + +commit 23de5dc1d5748bd0a821e963e9df187834089a12 +Author: RobEldo <43310214+RobEldo@users.noreply.github.com> +Date: Mon Nov 1 08:34:24 2021 +1000 + + Added better explanation and updated values + +commit ef74680219c9f3ef3bb4a4309fab97be8d9e261d +Author: Rick W +Date: Mon Nov 1 08:30:08 2021 +1000 + + move tf.cast from dice to save memory, replace with dtype declarations in driver + +commit f59be6a42e23bde05c799631f7dc68968eca20d8 +Author: dojster27 <45154205+dojster27@users.noreply.github.com> +Date: Mon Nov 1 08:29:12 2021 +1000 + + fix issues with setup + +commit 0cda1192c06b380f5cc47e72b3c31c64e25d648d +Author: RobEldo <43310214+RobEldo@users.noreply.github.com> +Date: Mon Nov 1 08:29:03 2021 +1000 + + Updating document images for new latent_dims + +commit 4f87e913821f58c63e59d71cca54bea816a52e73 +Author: Joshua Knowles +Date: Mon Nov 1 08:26:40 2021 +1000 + + Update metric to averge DC over all labels + +commit ffb6d3ea4f7ff09b8a2d16c88dec432f910778c4 +Author: Mark Coulon +Date: Mon Nov 1 08:26:12 2021 +1000 + + Tried to fix a final merge conflict + +commit 76d8679b48ec601e09fd38d67883260ddc630ee1 +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Mon Nov 1 08:25:21 2021 +1000 + + reverted some more files that were accidentally changed + +commit 55fb9654c6347fb429be273b448115c270d600d0 +Merge: 81faf79a 4634bfcb +Author: Mark Coulon +Date: Mon Nov 1 08:22:15 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/MarkCoulon/PatternFlow into topic-recognition + +commit 81faf79ac6e9c4beb12d5d8d55183a12a561e660 +Author: Mark Coulon +Date: Mon Nov 1 08:21:49 2021 +1000 + + Changed the folder location for the images + +commit 4634bfcb2b9ee58cdad6bc0152c1d4ee3269dd2c +Author: MarkCoulon <88473455+MarkCoulon@users.noreply.github.com> +Date: Mon Nov 1 08:21:14 2021 +1000 + + Update README.md + +commit 42293e80cb6d7ecbd09e4229dea6b28b3db93e5c +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Mon Nov 1 08:14:12 2021 +1000 + + reverting unintended changes + +commit 30d4023d6b5fcde1c1781444d7ff8f1f0dbc04ad +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Mon Nov 1 07:56:28 2021 +1000 + + Update model and training script + +commit 18b12522d79990642f84f8cde92d0680a49874fd +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Mon Nov 1 07:55:50 2021 +1000 + + Update SiLU image + +commit 608fb4cc45441616ee6d619a467f1f1ab3277d99 +Author: kplume +Date: Mon Nov 1 07:50:51 2021 +1000 + + Fixed images not showing + +commit e4bfb7ff9c2f245bcee915074f81e6167d89e87c +Author: kplume +Date: Mon Nov 1 07:50:07 2021 +1000 + + Fixed images not showing + +commit 9f0e30287ca97683ac53a809c9a36410c232f86b +Author: kplume +Date: Mon Nov 1 07:48:16 2021 +1000 + + Created README + +commit 86112a701a4983de42c7d201fbdf267d67fc0851 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 07:28:19 2021 +1000 + + Update README.md + +commit 7c3085f95d3562d42617e20453c78b939b22e200 +Author: dojster27 <45154205+dojster27@users.noreply.github.com> +Date: Mon Nov 1 07:17:41 2021 +1000 + + Data processing into unique patients + + Initial data processing including adding lables. Mixing done by patients so that test images are not from the same person as the training images + +commit 6942d9d620d6c623b0848c6c117f10e02c7a6d3d +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Mon Nov 1 07:10:23 2021 +1000 + + New model constructed file model.py + +commit c4bacf771cef056efd2cd314365ab2323d3e55cd +Author: Michelle Menesch +Date: Mon Nov 1 07:10:12 2021 +1000 + + Added VQ Trainer and training instructions to driver.py + +commit c547f803b5ec3ce59031be0915d6ce4469eb78e4 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Mon Nov 1 07:08:01 2021 +1000 + + Delete model.py due to bugs + +commit 69dbe2f0201dae1a42b4af66e1d70d32a9208f12 +Author: Michelle Menesch +Date: Mon Nov 1 07:06:37 2021 +1000 + + Added stand alone VQVAE model to model.py + +commit 4bb196bc5e52894296b6394e1c37d0aca1ac9414 +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Mon Nov 1 07:03:21 2021 +1000 + + Made some final edits and removed the facebook.npz file. + +commit 9d2818369f009ac8eed5edc361a0b1ccb8d2027f +Author: 克勞德 +Date: Mon Nov 1 06:59:59 2021 +1000 + + Update README.md, added dependencies + +commit 7585c5c43984dc48add37e06930fcb35c7fe65c9 +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Mon Nov 1 06:51:09 2021 +1000 + + Added commenting and made edits to the README.md file. + +commit a673229ad546f5050824ba826bf2818ff6e2f214 +Author: 克勞德 +Date: Mon Nov 1 06:44:35 2021 +1000 + + Update README.md, fix anchor links + +commit 176d09e11edd791551f1a5fef47b5ac6cd1dad49 +Author: 克勞德 +Date: Mon Nov 1 06:38:41 2021 +1000 + + Update README.md, added how to use instructions + +commit 5740c05ec5f0f4ef446fec2130dd6752e1879a33 +Author: kplume +Date: Mon Nov 1 06:22:17 2021 +1000 + + Change activation layer and added missing import + +commit df16dbb4d133c19f315bf034fa6b19f0c4a4a1ca +Author: kplume +Date: Mon Nov 1 06:17:50 2021 +1000 + + Created model and plotted results of training vs validation + +commit 24564c2b55c07a235e64134110e711291690ab9c +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Mon Nov 1 06:05:57 2021 +1000 + + Update README.md + +commit 198f37c279c434c5dbade09523bdd4f1760e473e +Author: xiaofangchen +Date: Mon Nov 1 04:03:09 2021 +0800 + + improve code design and documentation + +commit 8e8dee2d54d3db51c4e4eb2bcd5cb396d059c1b2 +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Mon Nov 1 05:56:29 2021 +1000 + + add documentation for model.py + +commit 6f25e8c4dfd0c6678c340c4f9ba151447d3a7e9b +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Mon Nov 1 05:43:14 2021 +1000 + + Migrate to Torch + +commit 85862b9ad8c3f5439340ec40f4bf1bdd791b48cb +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Mon Nov 1 05:42:50 2021 +1000 + + Get rid of Tensorflow + +commit 0768e24b1eac27702b87085786d8bbd74b32d33e +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Mon Nov 1 05:30:23 2021 +1000 + + Add reference in README + +commit 82adc1f007e0781764f52b93ebba104b69b3a1c6 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Mon Nov 1 05:25:21 2021 +1000 + + Add test helper method for evaluating vqvae model + +commit 00ea786f2ca2770675368b1ef1cdced023e38ee4 +Author: 克勞德 +Date: Mon Nov 1 05:09:12 2021 +1000 + + Update README.md, fix table of contents anchor link + +commit 3311a2961d0c6cb3de02f7547fee1306a8e5915c +Author: 克勞德 +Date: Mon Nov 1 05:05:07 2021 +1000 + + Update README.md, add model evaluation descirption + +commit 9f134c1fd50780c9829c6750b3a19410eae7e3dc +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Mon Nov 1 05:03:56 2021 +1000 + + Added README.md, some resources and slightly modified the model layers. + +commit 2b836b5201b9f2ff86d7ad26377e54e69be036d7 +Author: 克勞德 +Date: Mon Nov 1 05:03:38 2021 +1000 + + Add test set prediction plots + +commit d1bac4ec19580892ff5c25280ce55ab51a277025 +Author: 克勞德 +Date: Mon Nov 1 04:50:12 2021 +1000 + + Update README.md, fix structure + +commit e78fa2fab1c2bbb8c00ec998122eb7ad2280ce84 +Author: 克勞德 +Date: Mon Nov 1 04:47:51 2021 +1000 + + Update README.md, add training model desciption + +commit de126928ac889a138b818e0ba535132a0ea8643c +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Mon Nov 1 04:47:26 2021 +1000 + + add more details to README.md + +commit 027eb7549f5f4745b3f2530327a22766112af157 +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Mon Nov 1 04:45:51 2021 +1000 + + Delete text + +commit 157d6659df6e816bc37631836e81549229dd826e +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Mon Nov 1 04:45:29 2021 +1000 + + add some figures as the outputs of the model + +commit f44fb7e024d4056832183e2c4dd22ef12ef429cf +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Mon Nov 1 04:44:33 2021 +1000 + + Create text + +commit 454333bd551d8f9a4a9dcf0a25e8a93b2a1f86aa +Author: 克勞德 +Date: Mon Nov 1 04:44:27 2021 +1000 + + Add math equations and plots example images + +commit d9fd3da73445b5eafa89325f416bb2bf96088b26 +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Mon Nov 1 04:36:27 2021 +1000 + + plotted DSC line graph + +commit a80a5d02f40a2a596b78a4bf4b0e98f00c350907 +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Mon Nov 1 04:35:35 2021 +1000 + + Delete plot.py + + wrong files uploaded + +commit 64174a24286ddccf88cdcaaa06b013f2aa43f974 +Author: Chao-Chun Wu <52982031+white-segfault@users.noreply.github.com> +Date: Mon Nov 1 02:34:36 2021 +0800 + + added plot of training history and prediction visualisation in preprocess_data.py + +commit 879b7255bbe1b9123f07dc738b782593641ce42e +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Mon Nov 1 04:34:09 2021 +1000 + + plotted graph of DSC + +commit baba3110093190f08ca027643e97103ebbcf2df0 +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Mon Nov 1 04:32:49 2021 +1000 + + Create README.md + +commit d718e9ef86b7e375ef29817b2c18b9f74c66bd84 +Author: Chegne Eu Joe +Date: Mon Nov 1 02:30:13 2021 +0800 + + Implemented GPU training capability + +commit 2d44c2cf19fd141a47c1c23aea64ccca3ce4b5c0 +Author: kplume +Date: Mon Nov 1 04:17:05 2021 +1000 + + Fixed some missing prefixes and shape mismatches + +commit 8c7148365f252aa844beb7ac0c7148c38d0f4f27 +Author: Khac Duy Nguyen +Date: Mon Nov 1 01:17:02 2021 +0700 + + hotfix + +commit 9ab7ba87da3dfdd2eed49db045a40617eb4cb490 +Author: Khac Duy Nguyen +Date: Mon Nov 1 01:11:57 2021 +0700 + + Improve Encoding + +commit 3d074f94abe1934d75e75dd85a8f891bf53c8fc2 +Author: SteveInUQ +Date: Mon Nov 1 02:11:39 2021 +0800 + + Update more clear image of t-sne + +commit cec48c63a536b9992b1b72f20aa4b9da5f68bd09 +Author: 克勞德 +Date: Mon Nov 1 03:48:58 2021 +1000 + + Update README.md, fix table of contents anchor link + +commit 13c791920862d0494276bfd43ec868995f593fcd +Author: 克勞德 +Date: Mon Nov 1 03:47:19 2021 +1000 + + Update README.md, update structure + +commit 328e3dfabe247e8d184841a964f81898e85e2040 +Author: 克勞德 +Date: Mon Nov 1 03:45:39 2021 +1000 + + Update README.md, added table of contents + +commit 7d9ab1bcebb097c2f610b01405a6b54fb80864f4 +Author: Chao-Chun Wu <52982031+white-segfault@users.noreply.github.com> +Date: Mon Nov 1 01:40:32 2021 +0800 + + Implemented the Perceiver transformer Model as described in the paper + +commit 1e7cf9fd0698590c62995422c20a9de1f0fd92ef +Author: Kristian Thomassen +Date: Mon Nov 1 03:31:44 2021 +1000 + + Run autopep8 autoformatter on python files + +commit 2e00cba9078013a77fbf0337128d9ddeb5a0b22c +Author: Chegne Eu Joe +Date: Mon Nov 1 01:31:20 2021 +0800 + + Bug fix on PreNorm and GELU with latent parameters not being passed forward + +commit 51c2a2aa7a9adc51369924a5f3098c3c32d61221 +Author: 克勞德 +Date: Mon Nov 1 03:29:17 2021 +1000 + + Update README.md, added Improved UNet model description and update references + +commit 6a0993263af088df4b261027a4d8609c6f73b4ee +Author: Khac Duy Nguyen +Date: Mon Nov 1 00:28:29 2021 +0700 + + Added projection + +commit c317b54130e0526e7e0e784a2e061357860b67f2 +Author: Khac Duy Nguyen +Date: Mon Nov 1 00:27:58 2021 +0700 + + Refactor + +commit 032ef0787bbbe578b42b938c58cc35536481cb8c +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Nov 1 03:23:03 2021 +1000 + + Created README File and Added some comments + +commit 3782fc96f44d72ef9fd36967e7dd17ae4643b57b +Author: Kristian Thomassen +Date: Mon Nov 1 03:22:21 2021 +1000 + + Add finished README + +commit 7f0629b2393efc84f90fd4643de969fb1c916905 +Author: Tompnyx <69552836+Tompnyx@users.noreply.github.com> +Date: Mon Nov 1 03:21:47 2021 +1000 + + Removing the .gitignore file and .idea sub directory automatically generated by Pycharm + +commit 472da3d182e56d4d01737add153377eec0106ac8 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Mon Nov 1 03:20:16 2021 +1000 + + Update README.md for draft + +commit 703965d99d35e95cd49e0edbdd716927e4bbff81 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Mon Nov 1 03:18:35 2021 +1000 + + rewrite model to deal with bugs upon model.py + +commit 1d71df630e735a4dd05057c529123287d1672338 +Author: kplume +Date: Mon Nov 1 03:08:38 2021 +1000 + + Loaded the datasets and split them into their respective sets + +commit a3aad7bbf85825a2132207e68df653e3d78de38f +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Mon Nov 1 01:01:57 2021 +0800 + + Update README.md + +commit 053c5909758f30fcdb3e96f6194f92d82039d636 +Author: Chao-Chun Wu <52982031+white-segfault@users.noreply.github.com> +Date: Mon Nov 1 00:59:44 2021 +0800 + + Implemented the transformer layer with attention components + +commit 9e31809f0e5fee48f4fd87a692ab8e67a4915d38 +Author: kamenii +Date: Mon Nov 1 02:58:57 2021 +1000 + + Completed training loop. Updated run_stylegan.py to support command line arguments and added TrainingArguments dataclass to support it. Updated README. + +commit 226daa7e6aadecc967cbeebaf4b46354864c51ce +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 1 02:51:36 2021 +1000 + + Update README.md + +commit 456f9f37bb4c463328cb2d3102047be5c487560a +Author: Tompnyx +Date: Mon Nov 1 02:50:57 2021 +1000 + + Updated README.md to include dataset split justification and small formatting changes + +commit b595602600416835be27ff4dedd74bd786bf734b +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Nov 1 02:49:08 2021 +1000 + + Rearranged Imports + +commit df31f43eac79b19550e1a79f6274ef421f9ef46e +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Mon Nov 1 02:41:50 2021 +1000 + + Update README.md + +commit 1cab5ae44ddccbd0026d577775a2f84848aff8d2 +Author: Tompnyx +Date: Mon Nov 1 02:38:58 2021 +1000 + + Finished README.md file. Added example images for README.md in subdirectory '/Examples'. Reintroduced activation parameter for convolutional layers. Changed hyperparameters of driver.py to meet dice similarity coefficient greater than 0.8. + +commit dc2ddb55cf32267ccca4b5c330ab6387c917f54b +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Nov 1 02:35:39 2021 +1000 + + Added Main Function in driver.py + +commit 46786bd5211dacf86ee18e1a688acf61e3aade52 +Author: Chao-Chun Wu <52982031+white-segfault@users.noreply.github.com> +Date: Mon Nov 1 00:32:49 2021 +0800 + + Improved the Cross attention layer using function form + +commit 04ea39b850829dfdabe7bb4179af7ac733a09595 +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Nov 1 02:32:18 2021 +1000 + + Split Files Into driver and model files + +commit 7fcb99953a2d2d4d4035564a420ef723479e7b6d +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Nov 1 02:28:39 2021 +1000 + + Added Train Function + +commit 1bff86b973212534cfdb49450583c0e69a382d3c +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Mon Nov 1 02:22:33 2021 +1000 + + Fix gitignore in wrong folder + +commit 00df3575641f3cd56622adc2163feceef59eed6a +Author: 克勞德 +Date: Mon Nov 1 02:19:25 2021 +1000 + + Update example image + +commit dd77b0280aa394350ab7a6795f70409073e8c009 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Mon Nov 1 02:15:58 2021 +1000 + + Add helper class to draw bbox + +commit 7e029547721e6b694aff06c0592083ece79e71d2 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Mon Nov 1 02:15:39 2021 +1000 + + Update report add reference + +commit 6322f41b669ae8f6bf4a5b704e5cae4b8f9a5287 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Mon Nov 1 02:15:09 2021 +1000 + + Remove editorconfig for ipynb, not working + +commit c3686c7ff88a290040d61b79f8b43b3f3d897e28 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Mon Nov 1 02:14:46 2021 +1000 + + Fix annotation + +commit f6ad3424be0f15fb387170f94e320a6407840e4e +Author: 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type + +commit e1d46616f3415b53aa85e2e0c5cadee38609911c +Author: Yash Talekar +Date: Mon Nov 1 01:28:50 2021 +1000 + + Fixed prediction images + +commit 325ef7ac38cc57908fbe51bf598290f1b1944ada +Author: Humphrey Munn +Date: Mon Nov 1 01:27:55 2021 +1000 + + usage in readme + +commit 399d50e1b7a60708d9672c80b5510de29e8c5fa6 +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Sun Oct 31 23:27:52 2021 +0800 + + Update README.md + +commit d521240f0f00e44d928200395715135052934547 +Author: Humphrey Munn +Date: Mon Nov 1 01:26:39 2021 +1000 + + separated code into driver and model scripts + +commit 73c66b34262dbd8cdc5f7ef5f685e69d303e6e3e +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Sun Oct 31 23:23:02 2021 +0800 + + Update README.md + +commit cad668b38c70fd29a2ce81cc079a6e83a7e0e8e0 +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Sun Oct 31 23:22:11 2021 +0800 + + Update README.md + +commit 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preprocess, added reference. + +commit 4a8150bef67f07d2ef9d507916cfdddf0bf02bd9 +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Mon Nov 1 01:11:18 2021 +1000 + + README + +commit d5c5171cf0328d0ae4aad115b6fce2964020c9d4 +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Nov 1 01:02:11 2021 +1000 + + Fixed Patients Occuring in both Train And Test Sets + +commit 1bad0868e555f914fdb1495a9fc83b73d7ba111d +Author: 克勞德 +Date: Mon Nov 1 01:01:53 2021 +1000 + + Update README.md, format correction. + +commit 9deeced8e249786d3f3c08ddbfdd4fdd36128352 +Author: Chegne Eu Joe +Date: Sun Oct 31 23:01:36 2021 +0800 + + Minor perceiver refactor + +commit 34966827105079bfcb5ed27305dfce745d255a11 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Mon Nov 1 00:55:53 2021 +1000 + + Update README.md + +commit fa1833a654b3949dc3e068657c437ec57011d181 +Author: 克勞德 +Date: Mon Nov 1 00:54:50 2021 +1000 + + Update README.md, added info of Project Title, Author, Introduction, Dataset and Data preprocess. + +commit 149e53d56bb197c7f3173f09b1cc7ef0e43adf4b +Author: Lee Jian Yang +Date: Mon Nov 1 00:54:33 2021 +1000 + + readme with results + +commit c486b2a4be5ff8a491012355c48746adde03ed51 +Author: zaragolshani +Date: Mon Nov 1 01:51:50 2021 +1100 + + the number of classes updated in NMS fun call + +commit 43dca17eb2dd4fe0fc76940a5e8f03ac498fcd2f +Author: cristina1096 +Date: Sun Oct 31 14:51:48 2021 +0000 + + Create Readme file, upload imgs used for readme. + +commit 2f016976074b16b320627824aad4f162128b3025 +Author: 克勞德 +Date: Mon Nov 1 00:51:03 2021 +1000 + + Add dataset example image + +commit ce139e9483a38585da14bd4230fcba7a2c8be011 +Author: Zill wang +Date: Sun Oct 31 22:49:33 2021 +0800 + + Fixed bugs for making_xml.py and updated test.py + +commit 08b332a69ce656361b2c084e913e9ab15e77ee1d +Author: NhatHuyNguyen +Date: Sun Oct 31 21:43:23 2021 +0700 + + change title + +commit 86d75736e4ebc820492a2a53e609381b5c1f09e1 +Author: Zill wang +Date: Sun Oct 31 22:39:34 2021 +0800 + + Fixed the overall relevance of the code + +commit 601b1d6812bd3ac9636ef11d47d0b7e5af2245c7 +Author: NhatHuyNguyen +Date: Sun Oct 31 21:33:25 2021 +0700 + + clarification on testing and validation sets + +commit dddcc1f7d63a02b345f5581c5c02befabfc4d8d1 +Author: Zill wang +Date: Sun Oct 31 22:29:24 2021 +0800 + + Updated making_annotation.py and added test.py for test + +commit 3e0e30dd82e916f35d0c53656d9b763b3e11207f +Author: NhatHuyNguyen +Date: Sun Oct 31 21:26:16 2021 +0700 + + remove redundant file + +commit b90f74ee4c5d0a82ee0ae9b37f111a1c79414f5b +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Mon Nov 1 00:25:31 2021 +1000 + + added missing dependencies in readme + +commit 957cf3a740af423f111811d51d31be02ab17c5fe +Author: MujiDipto +Date: Mon Nov 1 00:23:50 2021 +1000 + + format readme code, fix spelling errors + +commit 95fcf743c0fa7e52946d09a81a298d6ede3bf219 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Mon Nov 1 00:19:54 2021 +1000 + + update table of contents + +commit 2ff3334e6329a1afdb0da9bf27e0b82934952e2f +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Mon Nov 1 00:17:56 2021 +1000 + + Add Usage information to readme + +commit 4b8a6ee5e38af35f454f154a7f4b8bc26278bd2d +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Sun Oct 31 22:13:22 2021 +0800 + + Update README.md + +commit e2b0b44f0f78a01017d1048248986b88310c65f3 +Author: Erin14 <55348583+Erin14@users.noreply.github.com> +Date: Sun Oct 31 22:10:37 2021 +0800 + + Add network architecture image created by keras + +commit 5ebc4f90bb7d356cfbd827007fbe0beea3b17edc +Author: kplume +Date: Mon Nov 1 00:10:30 2021 +1000 + + Created Decoder for improved model + +commit 859b7325afe317e4272e0081857b1baf583c6bac +Author: AndrewLuong6 <51429490+AndrewLuong6@users.noreply.github.com> +Date: Mon Nov 1 00:04:07 2021 +1000 + + Fixed last README Image Issue + + (Hopefully) Fixed the last of README image formatting. + +commit 4acee12f069bce3601fa770c48fce1d6c5bc6016 +Author: AndrewLuong6 <51429490+AndrewLuong6@users.noreply.github.com> +Date: Mon Nov 1 00:03:06 2021 +1000 + + Fixed README Image Syntax + + Wrong paths to images was used. Fixed to be absolute paths within the repo. + +commit 5f4c17a0f4b864aaadf06f6eadebc9810ff86054 +Author: Humphrey Munn +Date: Mon Nov 1 00:01:40 2021 +1000 + + same as prev (forgot to push) + +commit 2c1015d033b10f948c2164fdba12ea26589db8ed +Author: Humphrey Munn +Date: Mon Nov 1 00:01:20 2021 +1000 + + added results to readme, replaced ff code (had a bug), fixed classifier bug, code for plotting results and evaluating + +commit c00ba8eb633477b512431f40f13d78d8eb2902a8 +Author: Erin14 <55348583+Erin14@users.noreply.github.com> +Date: Sun Oct 31 22:01:15 2021 +0800 + + Update README.md + +commit d037e95413b5d125e3c780ec926b9f5e5b16d256 +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Sun Oct 31 23:59:59 2021 +1000 + + Added data and training for pixel cnn to run long term + +commit 61257c735064be43c5adaa9d1ea2cf6862b78b30 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Sun Oct 31 23:58:20 2021 +1000 + + update table of contents of readme + +commit 1133fce839931ebb645d3cdaed32a70a21943e94 +Author: Kristian Thomassen +Date: Sun Oct 31 23:56:32 2021 +1000 + + Adjust default hyperparameters to match last used + +commit b89f57b7a7c7af190da58170d3e4b680f4f7a620 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sun Oct 31 23:52:41 2021 +1000 + + Update Model1.py + +commit 4152d8c93071a3110efeb75ae198491293151a08 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Sun Oct 31 23:50:58 2021 +1000 + + add results to readme + +commit f06fcc05a003a23643f8c7a81db69b782a4d58e9 +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Sun Oct 31 21:50:16 2021 +0800 + + Update README.md + +commit 0d06e5d45a34e8101659bcf392bc450be69c539a +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sun Oct 31 23:49:56 2021 +1000 + + Update train_stylegan.ipynb + +commit 9f9fa7b6395fb43a9371dde8199dab4bd4011c7c +Author: AndrewLuong6 <51429490+AndrewLuong6@users.noreply.github.com> +Date: Sun Oct 31 23:49:41 2021 +1000 + + Added Images to README + + Added some images to the README file, with some extra discussion on the output accuracy. + +commit 900616ae9ed4dd95efb1bdc49e9b39730258c44d +Author: MujiDipto +Date: Sun Oct 31 23:47:00 2021 +1000 + + add annotations to image of results + +commit e304ece03b0c5f920295d1ea75cf072e87ba5fff +Author: Kristian Thomassen +Date: Sun Oct 31 23:45:19 2021 +1000 + + Generate PixelCNN samples and plot them + +commit ab134e3bc2000a4bd27ea3ec12862da47cdbd04a +Author: Ahmed +Date: Sun Oct 31 23:44:58 2021 +1000 + + scaled image to look betterg + +commit 45971da08448d493097513ca51a95e1dfd8bf488 +Author: Ahmed +Date: Sun Oct 31 23:43:45 2021 +1000 + + replaced image + +commit cea75113a9f3c810bca374d4bf01b90c07265fcf +Author: Ahmed +Date: Sun Oct 31 23:43:30 2021 +1000 + + final code tweaks + +commit b7a7536cae8a921da26b9b220b0c86044afa5737 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Sun Oct 31 23:43:15 2021 +1000 + + add DSC information to readme + +commit 0be82adce071385b1f002b977528e66205ee31c9 +Author: Ahmed +Date: Sun Oct 31 23:41:34 2021 +1000 + + fixed readme formatting + +commit bd7ce321cb19f28a34064ecbef1dfc7fbfeee5df +Author: Ahmed +Date: Sun Oct 31 23:39:47 2021 +1000 + + fixed readme errors, added loss plot + +commit 426efdadc3761a007262d37d331cf3bf6566c0c6 +Author: MujiDipto +Date: Sun Oct 31 23:38:16 2021 +1000 + + add dsc formula image + +commit 2112302b83a72bb6d3a99587c096d65021ca09bd +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Sun Oct 31 23:37:48 2021 +1000 + + Update README.md + +commit 7622a1cb46ce917e4306fa1955602c66eaf81bcd +Author: Ahmed +Date: Sun Oct 31 23:36:31 2021 +1000 + + readme done + +commit cef5967640fc0bd631b638f973a1a774ed83a15c +Author: Mallika <55978813+mallika-x@users.noreply.github.com> +Date: Sun Oct 31 23:35:34 2021 +1000 + + Updated VQVAE.py documentation + +commit 44ce3534ca3ea8913ec6400c626226b1310d1e3b +Author: MujiDipto +Date: Sun Oct 31 23:30:10 2021 +1000 + + add images of results and accuracy + +commit 684a5b92ed5acb612fe34aace20efa8444e86857 +Author: MujiDipto +Date: Sun Oct 31 23:27:36 2021 +1000 + + removed unused imports, renamed display() to display_images() for better clarity, added code to generate images. + + Model now ready for final run + +commit bb93cf54034c90f230d46d9a9a8d0c75c5205dba +Author: wahsnitram +Date: Sun Oct 31 23:26:31 2021 +1000 + + Added basic modules + + Downsampling, Upsampling, and Localisation modules created. unused imports removed + +commit ef5c773fdac42f35fa7ead28a00293ac830fcb9e +Author: Yash Talekar +Date: Sun Oct 31 23:25:33 2021 +1000 + + added images for the README file in the resources folder + +commit b76a1f91209bf9eae042dfdf23074c0210e0655f +Author: kplume +Date: Sun Oct 31 23:25:31 2021 +1000 + + Created Encoder for improved model + +commit 545882fd433547792aa177c95164c27f37ba86c6 +Author: Ahmed +Date: Sun Oct 31 23:25:16 2021 +1000 + + readme + fixed code spelling mistakeg + +commit d64ef6ea8bfe8bfbd53ebb4bc59010e6ff119277 +Author: Yash Talekar +Date: Sun Oct 31 23:24:44 2021 +1000 + + added requirements.txt + +commit 324fdba686a232d216d21c21ae5d3b7b12521702 +Author: Yash Talekar +Date: Sun Oct 31 23:24:25 2021 +1000 + + Added a proper README and finalized driver + +commit 2925185cc8185580a72a3533f8bb54c5eb565160 +Author: Ahmed +Date: Sun Oct 31 23:22:40 2021 +1000 + + clean up + added to readme + +commit b1dc9203f399d23876e90d6aca55c7dac58463da +Author: Mallika <55978813+mallika-x@users.noreply.github.com> +Date: Sun Oct 31 23:20:17 2021 +1000 + + Added additional documentation to driver script. + +commit bfe860b49c0df778c866e7809a70cdf6958862f0 +Author: cristina1096 +Date: Sun Oct 31 13:15:02 2021 +0000 + + update config, finish train.py + +commit 1d03f48c9453028667ea5d80afa6bf46c30f28fa +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Sun Oct 31 21:13:53 2021 +0800 + + Update README.md + +commit f76b34851a6036e60c7f2942892d55ab8e5cc4b6 +Author: Erin14 <55348583+Erin14@users.noreply.github.com> +Date: Sun Oct 31 21:13:45 2021 +0800 + + Update README.md + +commit b3345d8594416a17c705bac6abf0da47fb74b53f +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Sun Oct 31 21:11:37 2021 +0800 + + Update README.md + +commit ff5996815bd828a4278bc77d84e0d1dc843d0a6f +Author: Erin14 <55348583+Erin14@users.noreply.github.com> +Date: Sun Oct 31 21:11:21 2021 +0800 + + Delete .DS_Store + +commit 1de3339acbc88d60d9845814d2422403455a9a57 +Author: Erin14 <55348583+Erin14@users.noreply.github.com> +Date: Sun Oct 31 21:09:22 2021 +0800 + + Update README.md + +commit d879db53d6be121a777cc724f450384563d9f58f +Author: tomdx +Date: Sun Oct 31 23:09:16 2021 +1000 + + Remove .idea folder + +commit 1910e8f0f9dbea17938b5df4ee15a46572668e1c +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Sun Oct 31 21:08:12 2021 +0800 + + Update README.md + +commit 1f56200e4434c12e5f51d02cb4c1f2e736ecfc31 +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Sun Oct 31 21:07:40 2021 +0800 + + Update README.md + +commit c764f29fcd831ce02f88bbba4a95077bdf861bb2 +Merge: f08a9e47 6af77fcd +Author: tomdx +Date: Sun Oct 31 23:04:23 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/tomdx/PatternFlow into topic-recognition + +commit f08a9e47364cb93ba2d5a84a767439b61a3b234a +Author: tomdx +Date: Sun Oct 31 23:04:03 2021 +1000 + + Change folder name to VQVAE + +commit 6af77fcde5e8db3f5cbaa4f685c34735431604b7 +Author: Thomas Le <55824662+tomdx@users.noreply.github.com> +Date: Sun Oct 31 23:03:12 2021 +1000 + + Fix formatting, reduce size of images + +commit 5f697f6cc7662cb3f77e4fae39eedfbb834ed3c3 +Author: Richal Verma +Date: Sun Oct 31 23:02:32 2021 +1000 + + Update README.md + +commit c700a8fac8d5b14ab2e737cb5d893b5f3aec0bca +Author: Muhammad Wildan Aziz +Date: Sun Oct 31 23:01:32 2021 +1000 + + Reformat code + +commit c239505a2b86f652f621b2bc8c170a76e8d5f93b +Author: Muhammad Wildan Aziz +Date: Sun Oct 31 22:59:04 2021 +1000 + + Create model and layer + +commit 5879642273c2541f5a585bf417735656a520a5cf +Author: Cherian <51251921+cherianjohn@users.noreply.github.com> +Date: Sun Oct 31 22:57:47 2021 +1000 + + Update README.md + +commit f108b18d97db03f7ecdc262f5da373a2fa974d29 +Author: Thomas Le <55824662+tomdx@users.noreply.github.com> +Date: Sun Oct 31 22:57:41 2021 +1000 + + Fix tidiness of images, add VQVAE image + +commit 2a6f0f3c111a8841ebd1ed841e659734cb6993dd +Author: Thomas Le <55824662+tomdx@users.noreply.github.com> +Date: Sun Oct 31 22:54:27 2021 +1000 + + Add references and images + +commit f8b0e075145225ef52c53d6de27959dcbfa55a90 +Author: Erin14 +Date: Sun Oct 31 20:53:40 2021 +0800 + + split the notebook into python files, upload images and update README.md + +commit 3125d079c0c9be881357cd062ff13365b96a22bd +Author: zaragolshani +Date: Sun Oct 31 23:53:34 2021 +1100 + + adding the script to split test and train data + +commit 75db6c958045dd38e7770531e0135c6c6599a15d +Author: Michelle Menesch +Date: Sun Oct 31 22:52:05 2021 +1000 + + Structure of README.md complete. Need to add decriptions and plots as per marking criteria/task sheet + +commit e73e8d748b36027f9cba877917f80c891d0acc7f +Author: tomdx +Date: Sun Oct 31 22:51:52 2021 +1000 + + Add validation split + +commit 2d65435f2933a65e5fd6432078219496b8c3d45d +Author: tomdx +Date: Sun Oct 31 22:50:14 2021 +1000 + + No longer shows vqvae loss - code had bugs + +commit bb0318db8aa133fb5592d67650c9c3664d53e4c8 +Author: Cherian John +Date: Sun Oct 31 22:46:08 2021 +1000 + + Tweaked Documentation + +commit 300215036071e24ededf77b2a6b3cef39f3beae1 +Author: Richal Verma +Date: Sun Oct 31 12:45:14 2021 +0000 + + Add new results for readme + +commit d07aef3dea029d580ee26c3e90a6d80add2ff1e1 +Author: Muhammad Wildan Aziz +Date: Sun Oct 31 22:45:12 2021 +1000 + + Fix split issue + +commit 9eec17a32849b55719e6ab56c5ff52c29395ae69 +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 22:37:54 2021 +1000 + + Update README.md + +commit 4fbebec9a3c48ee981569d2d9a1f8744a535767a +Author: tomdx +Date: Sun Oct 31 22:36:18 2021 +1000 + + Track and show VQVAE training loss + +commit d1d72aef534cc73f4111f7f54a13a51c634afcc9 +Author: Richal Verma +Date: Sun Oct 31 12:31:51 2021 +0000 + + Minor style changes to code + +commit 52a455e8f8d3d35b19bd2d2378064e6ecaa83e49 +Author: kplume +Date: Sun Oct 31 22:27:46 2021 +1000 + + Created Localization Module + +commit 2cd83254cc2a6f7afb0d393ce7b316a150a6c387 +Author: Richal Verma +Date: Sun Oct 31 12:26:56 2021 +0000 + + Update readme.md to reflect the implemented model and provide information on training, results and architecture + +commit 03aab200e8c60cdddd02037a774a88dbcdb43694 +Author: Richal Verma +Date: Sun Oct 31 12:25:43 2021 +0000 + + Update requirements.txt to be more flexible + +commit dc24161feb22ecec2e4f4e6bfce0e2047c247d79 +Author: tomdx +Date: Sun Oct 31 22:24:50 2021 +1000 + + Fix bug in dataloader + +commit 453bfeebe0b639d47f77e743d637b2cadfe3629a +Author: yousifpatti +Date: Sun Oct 31 22:24:40 2021 +1000 + + Removed old files + +commit b060d6d6dcf36053a058b0859aa9df14fe914dbe +Author: zaragolshani +Date: Sun Oct 31 23:24:21 2021 +1100 + + test data list + +commit 23e248e92154767b03ca791eb8b4896d2e09e20e +Author: Richal Verma +Date: Sun Oct 31 12:24:05 2021 +0000 + + Update driver and model with minor syntax and documentation improvements as well as converting parts to use better code structure and tensorflow functions instead of numpy + +commit ffa0d4e1b33b9bd7f1147f686bdcb02bf452c7a8 +Author: zaragolshani +Date: Sun Oct 31 23:23:38 2021 +1100 + + train data list + +commit c38dd9bc95f7eaa11545c0aed9d467ae076cd704 +Author: tomdx +Date: Sun Oct 31 22:21:55 2021 +1000 + + Change epochs to normal value + +commit 93487cb272de78cdbceef183e4b418652453db4b +Author: tomdx +Date: Sun Oct 31 22:21:11 2021 +1000 + + Tidying up code, adding comments + +commit afee0d522ae8e1916a17ed2095b370e019087c18 +Author: Mallika <55978813+mallika-x@users.noreply.github.com> +Date: Sun Oct 31 22:15:36 2021 +1000 + + Added justification of data splits to README.md + +commit dda6e23544b8be9de5f583d78d276fa01a31f0f5 +Author: Avinash Chandra +Date: Sun Oct 31 22:11:54 2021 +1000 + + Complete working styleGAN | Added training block and file converter. + +commit 0e9f14fb476a2dba433d75551250c0e53133122d +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Sun Oct 31 22:11:32 2021 +1000 + + Move useless files + +commit e9558ebf135592332881c6d6c2222c36b2ff2435 +Author: tomdx +Date: Sun Oct 31 22:09:30 2021 +1000 + + Update README.md + +commit 7cf2ad3dc2736769d6551e20e246eb20f27e24f8 +Author: Robert +Date: Sun Oct 31 12:06:47 2021 +0000 + + Updated model for PixelCNN performance + +commit 4d32de11b2378114f38d95dbaf6d5be8f316628f +Author: RobEldo <43310214+RobEldo@users.noreply.github.com> +Date: Sun Oct 31 22:03:51 2021 +1000 + + Added information about the PixelCNN + +commit 6032199a25d41f454696bfdd3f86e98df2bd1eba +Author: Michelle Menesch +Date: Sun Oct 31 21:58:44 2021 +1000 + + Added scikit-image dependency to README.md for SSIM calculation. + +commit e06b58fe7552d26f90ef91739dc388f9facbe30f +Author: Michelle Menesch +Date: Sun Oct 31 21:56:45 2021 +1000 + + Added the vector quantizer class based on the Keras tutorial to driver.py. Reference supplied in code comments. + +commit 3c610b7dcae6957a16f2fe22a27a97eedac66aed +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Sun Oct 31 21:53:56 2021 +1000 + + Update README.md + + The introduction of the algorithm with the implementation of the related files. + +commit 39b83a58cb1a75f09c29c788e3fdc72649a0e66c +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Sun Oct 31 21:48:25 2021 +1000 + + add a pre trained model (net_paras2) + +commit 191d9b88f07fa27c92ae8b2f0f0e926596cd735e +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Sun Oct 31 21:47:06 2021 +1000 + + change the model architecture. + +commit 13bf23734331efa1249656b532136b80c3ac132b +Author: Lee Jian Yang +Date: Sun Oct 31 21:42:50 2021 +1000 + + finished docstrings in all files + +commit 862900f5e8f5a6712adbe2d7c86c897e9944e481 +Author: Joshua +Date: Sun Oct 31 21:41:43 2021 +1000 + + Added Hyperparamter Tuning in README + +commit 7a88977534b0d88d2b5c8515c66193d06f3bd70d +Author: kplume +Date: Sun Oct 31 21:38:58 2021 +1000 + + Created Upsampling Module + +commit 7ea5d312146fd758d48fdcaebbe4fbd3d8c3d586 +Author: MujiDipto +Date: Sun Oct 31 21:38:37 2021 +1000 + + added reference for accuracy plot function + +commit 947b3390caffcfb9d83f6b24055229e6bd43ac9e +Author: Bobby Melhem +Date: Sun Oct 31 21:37:51 2021 +1000 + + Added comments still no proven results with numerous attempts + +commit c71288980edaf3bd23dba6ce714b4b8315543bb7 +Author: MujiDipto +Date: Sun Oct 31 21:37:50 2021 +1000 + + fixed incorrect label on the accuracy plots + +commit 230e10ebd9e62c1a67783f8c96af6cce420bffab +Author: JoeHolownia +Date: Sun Oct 31 21:37:43 2021 +1000 + + Refactoring and cleaning up code, tested reduced latent array size with suprisingly good results + +commit df65864c4395af2a7c83a25298a8d0f138e3c2f2 +Author: MujiDipto +Date: Sun Oct 31 21:36:30 2021 +1000 + + add function that plots accuracy graphs in utilities.py + +commit 245f74f0bec0251fde6380976cd93143635e8f35 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Sun Oct 31 21:32:12 2021 +1000 + + Update README.md + +commit 98ef0c866dd560b539c66b20a738750cf7806165 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Sun Oct 31 21:31:56 2021 +1000 + + Update README.md + +commit 7c495e7195ddff1e08c5eb2f7a457fb528e647b8 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Sun Oct 31 21:31:10 2021 +1000 + + add Improved unet.png + +commit 53b30d80ee401bdaf0f87ca2d3dcd6dfc43db662 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Sun Oct 31 21:28:13 2021 +1000 + + Update README.md + +commit 9a3b9a7fe4de6393a34dfa1c1337e7195590b481 +Author: MujiDipto +Date: Sun Oct 31 21:22:26 2021 +1000 + + update docstring of display function in utilities.py + +commit ccccb59945ff039985982a1226df2ac030399502 +Author: MujiDipto +Date: Sun Oct 31 21:21:39 2021 +1000 + + add date and license information on header blocks + +commit d2542ac0c2f1dd75d013aac09f4673ce8b9e1a62 +Author: default-jamc <88128966+default-jamc@users.noreply.github.com> +Date: Sun Oct 31 21:19:08 2021 +1000 + + Updated README, wording changes + +commit 2d655b5e164e0e9b0faef15ca82e50b89d33f7d8 +Author: MujiDipto +Date: Sun Oct 31 21:18:29 2021 +1000 + + moved functions from process_data.py to utilities.py to remove redundant module. Removed unused imports + +commit 14e1b30539b4feafd82ac769a10ff4a88f11e451 +Author: d7a7 +Date: Sun Oct 31 21:16:20 2021 +1000 + + Added function that displays predicted data. + + The function displays the original image, the true mask and the + predicted mask. + +commit d7b05f825f4ed140d29ba13e127f08fb9217f73f +Author: MujiDipto +Date: Sun Oct 31 21:14:55 2021 +1000 + + add display function to utilities.py for displaying results + + fixed incorrect type name on docstring of dice_similarity + +commit 5961c95c7fce83afbc434e4b548a527c18659fd1 +Author: default-jamc <88128966+default-jamc@users.noreply.github.com> +Date: Sun Oct 31 21:10:28 2021 +1000 + + Updated README, general wording changes + +commit aff615c1ba2940f3331b01d1c5973ace8d23ea2c +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sun Oct 31 21:08:21 2021 +1000 + + the result of third yolo parameters + + the f1 score achieved 0.86 + +commit bfcf910e05a6bafd404b8d5464919e3e9f636725 +Author: John_proposal_grape +Date: Sun Oct 31 21:04:55 2021 +1000 + + Resolving issues. + +commit 2bbf69447dfc785be4d24e65a0bc1887110d51e7 +Author: Rick W +Date: Sun Oct 31 21:04:06 2021 +1000 + + add readme images + +commit 0f31a004c991663ce7540d0d94438650f20687ed +Author: Shravan Shivpuri <67152027+shravanshivpuri@users.noreply.github.com> +Date: Sun Oct 31 21:02:09 2021 +1000 + + Updated README.md - 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VQVAE works + +commit 699557de5a2233af5be38aee68911b99c12e3107 +Author: default-jamc +Date: Sun Oct 31 20:17:56 2021 +1000 + + Final model. Achieves 80 on test set. Completed documentation. 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<64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 19:13:42 2021 +1000 + + update README.md + +commit fea654d729d2c9df1c8689bacefce94e18415438 +Author: Khac Duy Nguyen +Date: Sun Oct 31 16:13:04 2021 +0700 + + Restructure Perceiver as org model + +commit aff5b21b923481a9f2ac3fa7d5dadb623a4295eb +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Sun Oct 31 19:12:38 2021 +1000 + + add documentation in details + +commit a7bbf57e4e549164814b07de590ff922481524d3 +Author: Khac Duy Nguyen +Date: Sun Oct 31 16:11:36 2021 +0700 + + Refactor Test Script + +commit 3f9d101bae5d6a0621b7dbe10582097ab836448b +Author: Khac Duy Nguyen +Date: Sun Oct 31 16:10:07 2021 +0700 + + Working Transformed Data + +commit 321d9a83e8bbd933ea60ccda337bf4cba95d0acc +Author: Khac Duy Nguyen +Date: Sun Oct 31 16:09:27 2021 +0700 + + Apply Luong Attention as paper + +commit a14e9fc31e623d7160b0a8125d175aa42986528f +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Sun 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implementation of vector quantization which takes less computational time + +commit 5d4b4cf3017842d5b3edf68f7b4ed8762df79f0a +Author: Rick W +Date: Sun Oct 31 18:41:28 2021 +1000 + + replacing numpy with tensorflow + +commit 7fa6c065f26394c0e5f07beac662dfdd20509856 +Author: aCoalBall <59113878+aCoalBall@users.noreply.github.com> +Date: Sun Oct 31 18:36:57 2021 +1000 + + Create test.txt + +commit 2092a0e4a16e4950b5e43e4efc2a3fe49aed8ecb +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Sun Oct 31 18:36:25 2021 +1000 + + Add validation based on ssim to train helper method. + +commit d403162222f5f87b893d09e76e28132952559397 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sun Oct 31 18:33:29 2021 +1000 + + Update README.md + +commit 9ffe7508b4eb0118c68520199aa7ed925b0b3451 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sun Oct 31 18:32:39 2021 +1000 + + Update README.md + +commit 3bb321d32ce0c8bd745acad8dddee690257c5aec +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sun Oct 31 18:27:17 2021 +1000 + + Add files via upload + +commit a76992b4176054941881e3eecd187439730a73ad +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sun Oct 31 18:26:36 2021 +1000 + + Update README.md + +commit af7a89b34967472e5fdee071793817d6ccc42ce3 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Sun Oct 31 18:23:02 2021 +1000 + + Add tqdm progressing bar and separate logging for different loss sections to train helper method. + +commit d23a11ec48f9896d0616e4ddc92af7ba247db6d7 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Sun Oct 31 18:17:36 2021 +1000 + + normalise image + +commit ac609b9cccfef97b14d8f3909c2c14f1812609d7 +Author: Mallika <55978813+mallika-x@users.noreply.github.com> +Date: Sun Oct 31 18:14:22 2021 +1000 + + Updated README.md + +commit 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comments and adjusted the sample sizes for training the pixel cnn model to make it better slightly. + +commit 8de5db6d9174f23a4e59ba595f46a3f94281fb9f +Author: tomdx +Date: Sun Oct 31 18:09:51 2021 +1000 + + Move more functions into visualiser + +commit fe7272c3f7c08a0330220f8ff9489430eb1d6861 +Author: Christian +Date: Sun Oct 31 18:09:43 2021 +1000 + + Update visualize.py + + Changed Author Name + +commit d999774af73a9672c854be28d0c7ae77e6b6ad84 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Sun Oct 31 18:07:23 2021 +1000 + + Add preload_imgs helper method. + +commit 83b0696320e382f057b348f44f90eedb13e1243d +Author: tomdx +Date: Sun Oct 31 18:06:46 2021 +1000 + + Factor out visualisation functions into visualiser + +commit b100a3c0eecfab2952c0d48d3b20968b9aa77a66 +Author: Andrew +Date: Sun Oct 31 18:05:36 2021 +1000 + + 3d Unet files deleted + +commit 663e663e3d9ed92a7f5f392240f519abd5df9eb3 +Author: yousifpatti <70254211+yousifpatti@users.noreply.github.com> +Date: Sun Oct 31 18:05:20 2021 +1000 + + Update README.md + + Noted the self similarity for the report + +commit 26299fece68d2d03b4914346fa13d648d0a2f6f0 +Author: Andrew +Date: Sun Oct 31 18:00:22 2021 +1000 + + Documentation added to README.MD + +commit dfdd7c16ff5b84f6a16fe484f10731ad0e7cbf9e +Author: yousifpatti <70254211+yousifpatti@users.noreply.github.com> +Date: Sun Oct 31 17:53:38 2021 +1000 + + Updated readme.md + + Added details on how to run and file path as well as changing how the text was adjusted around the images. + +commit 50e452395fa812ec50eec326d2b75f9d75699115 +Author: tomdx +Date: Sun Oct 31 17:53:31 2021 +1000 + + Remove stray debug statement + +commit b49fb9492e795faa177e69494a8155c7e78a5785 +Author: tomdx +Date: Sun Oct 31 17:52:46 2021 +1000 + + Remove final numpy usage + +commit d3c51a459db8805db3371106a97f6fcde5d82aa7 +Author: Yash Talekar +Date: Sun Oct 31 17:48:11 2021 +1000 + + added normalization to modules + +commit 2c1cdfac8b3899883a53e07ca1a14a6fe14bcee1 +Author: yousifpatti +Date: Sun Oct 31 17:44:03 2021 +1000 + + Updated readme.md for submitting + + The readme.md file now contains the final report information. + +commit 16465fc11d7d5e6ef66d379135341632a762f093 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sun Oct 31 17:38:14 2021 +1000 + + Add files via upload + +commit 1081817d15dc5858789df3648b9cabf4a31bbba7 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Sun Oct 31 17:37:37 2021 +1000 + + Deepen encoder&decoder by adding residual blocks and adjust the num of feature maps wrt the dim of latent vectors + +commit f5cd37ca31c520bb6a7ba56491d2725a0e3252fa +Author: Lee Jian Yang +Date: Sun Oct 31 17:31:55 2021 +1000 + + added docstrings in preprocessing.py file + +commit e14964bd7dc62d28094e1f774ff13aaa7cebeb1e +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Sun Oct 31 17:29:42 2021 +1000 + + Add residual block module + +commit 281b3f809b3a4f6c47d4628a3d796a9119c7f3af +Author: default-jamc <88128966+default-jamc@users.noreply.github.com> +Date: Sun Oct 31 17:29:15 2021 +1000 + + Updated README, reworded segmentation section + +commit ee16308be16663fe10ccf77257008e49a6079362 +Author: Khac Duy Nguyen +Date: Sun Oct 31 14:25:38 2021 +0700 + + Fix Fourier Encoding + +commit 4ddc4d930c9340702e9cbc7aeb141c64f4603638 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Sun Oct 31 17:24:51 2021 +1000 + + Move the computation of vq loss from train helper method to model vq method + +commit ab2c6b4fa220eb760e5866677a553bb80b390045 +Author: RobEldo <43310214+RobEldo@users.noreply.github.com> +Date: Sun Oct 31 17:23:58 2021 +1000 + + Included more information + photos to the README + +commit 5c95e0337aa620cae699910b3568d233c13207c4 +Author: Cherian John +Date: Sun Oct 31 17:23:58 2021 +1000 + + Cleaned and commented algorithm files, created driver.py as example of how to use algorithm + +commit fef3f9e755d9e7f8e45d091b8a01708f92d03109 +Author: yousifpatti +Date: Sun Oct 31 17:23:48 2021 +1000 + + Added resources folder + + The folder has images used in the readme.md file + +commit 5112f2b2a228ec354b8270964e096b3626792970 +Author: Yash Talekar +Date: Sun Oct 31 17:22:59 2021 +1000 + + added accuracy and loss curves for training model + +commit 43bd4206873c760280f430fc0908aa677c689bd5 +Author: Tony +Date: Sun Oct 31 17:22:28 2021 +1000 + + cleanup + +commit f952791a24b24a34f3902ba98610618c3bfbb0ba +Author: Yash Talekar +Date: Sun Oct 31 17:22:22 2021 +1000 + + fixed concatenation layer in model + +commit 4e9a501cf4713645395e02fec4e8f24a0b07d8b4 +Author: yousifpatti +Date: Sun Oct 31 17:21:49 2021 +1000 + + Added the images outputs to the output folder + + I added the outputs folder containing the images outputs for 20 and 100 epochs. + +commit 7ea489183b785d5864c57866431bc3796184f299 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Sun Oct 31 17:16:39 2021 +1000 + + Correct the implementation of vector quantization + +commit 77c62fa9d65ba69d43f754684a3ff70f2bcc64bd +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sun Oct 31 17:13:00 2021 +1000 + + Update README.md + +commit f64b726b9329ea7b4c00534ed6d638515cf4541f +Author: Mark Coulon +Date: Sun Oct 31 17:11:59 2021 +1000 + + Fixed up a file import + +commit 42ae4f60d94864f9d2146d645970f9f886aa3c97 +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sun Oct 31 17:09:27 2021 +1000 + + Update README.md + +commit fc738b941ababbf2fa2cc7d140378208c53180d3 +Author: Mark Coulon +Date: Sun Oct 31 17:07:07 2021 +1000 + + fixed up merged readme file again + +commit 93ba1872c3b8c36038aa4f093c13d77bc18a7601 +Author: Mark Coulon +Date: Sun Oct 31 17:05:26 2021 +1000 + + Fixed up readme file from merge + +commit 1aa46694b9a8423d8fa457dd53a1624ad7cd130d +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sun Oct 31 15:04:40 2021 +0800 + + Update README.md + +commit 008ffb576978d9f4c8ee4c394b619d95b1cd489b +Author: Mark Coulon +Date: Sun Oct 31 17:03:38 2021 +1000 + + removed files that were in both folder from the merge + +commit dafb5e8dcc2188a621943097dff0898109cec069 +Author: Mark Coulon +Date: Sun Oct 31 17:01:13 2021 +1000 + + fixed up a merge conflict with a file that was already there, there was an error when moving from master branch to topic-recognition. Also fixed up the file location in the actual main file + +commit fde3eedf7cc70e89bdf3237c519d594d7fbbff79 +Author: Zhien Zhang +Date: Sun Oct 31 17:01:07 2021 +1000 + + Enable commandline arguments + +commit 56ae2d74c52238b0b9365467bbe2da49978f9150 +Merge: 64d4d2d6 e4603745 +Author: Zhien Zhang +Date: Sun Oct 31 17:00:21 2021 +1000 + + Merge remote-tracking branch 'origin/topic-recognition' into topic-recognition + + # Conflicts: + # recognition/45471861_StyleGAN/models.py + +commit 64d4d2d6e70be866b03b8aa233a730ff44f5ffb1 +Author: Zhien Zhang +Date: Sun Oct 31 16:57:54 2021 +1000 + + Add more docstring in train.py + +commit d49c1ee236aef1d512f24ae2fa6892833baf0405 +Author: tomdx +Date: Sun Oct 31 16:57:23 2021 +1000 + + Change Lambda layer to a concrete layer + Add structure for the README + +commit 64aed061117f21020e991d2b5b7a1cfbe5f61631 +Author: Zhien Zhang +Date: Sun Oct 31 15:08:38 2021 +1000 + + Added more docstring and reformat the structures + +commit b1684af4fca1f77d7aadd5e5a83202fda1b6842d +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sun Oct 31 16:50:46 2021 +1000 + + Update README.md + +commit 226f99749f80ff8c63ddfd9af5f75561d3c4de68 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sun Oct 31 16:49:58 2021 +1000 + + Add files via upload + +commit e20c682831c1aa9c24b418befe37df33b4f5ea63 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sun Oct 31 16:46:22 2021 +1000 + + Update README.md + +commit 8acdba93c39139a8922486ec2d36353f86cce65d +Author: Christian +Date: Sun Oct 31 16:41:14 2021 +1000 + + Update README.md + + corrected spelling errors + +commit ca61f55b598c9e0a0f559200235093e5693e0261 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sun Oct 31 16:40:37 2021 +1000 + + Update README.md + +commit 134431de3c32a8021049c712add54b678b7c66da +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sun Oct 31 16:39:51 2021 +1000 + + Update README.md + +commit 2b053310a68d129d3d3116daf1e859a0524e074c +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sun Oct 31 16:38:46 2021 +1000 + + Update README.md + +commit a14f36eab39a96ce14a4ca4fda298908ccf2b3d3 +Author: Tony +Date: Sun Oct 31 16:37:19 2021 +1000 + + Check image paths + +commit 33aedd564552bbc5298272d17d02cc92364996cc +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sun Oct 31 16:37:04 2021 +1000 + + Add files via upload + +commit 24d3dbff924c21c24584aaf58959b84fdb13d6b8 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sun Oct 31 16:36:28 2021 +1000 + + Update README.md + +commit 53e4ca12e7fe5e971d2d7584a2d5779e94f1d103 +Author: Tony +Date: Sun Oct 31 16:36:10 2021 +1000 + + Check image paths + +commit 4bd1d41ec7953ff7f577366f12fb8eceb48d3911 +Author: default-jamc <88128966+default-jamc@users.noreply.github.com> +Date: Sun Oct 31 16:34:11 2021 +1000 + + Updated README, added to Usage and fixed image alignment + +commit b235e001ad88787a6108b01d9f0c3c37d81a5bc5 +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Sun Oct 31 16:33:20 2021 +1000 + + Implemented Fourier Encode Fix From Rishit Dagli + +commit a3b23fa7c253527ff1614f5c6659047a521cb120 +Author: tomdx +Date: Sun Oct 31 16:32:22 2021 +1000 + + Add README.md dependencies and references (incomplete) + +commit b5b3d5a1dcbb374879a62427b1052649d2f81a62 +Author: Michelle Menesch +Date: Sun Oct 31 16:30:09 2021 +1000 + + Added the encoder and decoder networks to model.py + +commit b8f8e3ee1236c2264d5a4c2c417e690c01da7a5b +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sun Oct 31 16:26:09 2021 +1000 + + Update README.md + +commit 01c62c1b379ffa88ff50cbd8e6cb24b72c954965 +Author: Rick W +Date: Sun Oct 31 16:25:12 2021 +1000 + + clean up unused code and add comments + +commit 27f851d0614e1af14272c5333dc6ff7977c5494b +Author: Christian +Date: Sun Oct 31 16:21:51 2021 +1000 + + Update README.md + + fixed spacing + +commit d88b07c53ae1afdb2e3bac7670c561f567905f7d +Author: Mallika <55978813+mallika-x@users.noreply.github.com> +Date: Sun Oct 31 16:21:40 2021 +1000 + + Created README.md + +commit 21047610321f3556c844e10822a6c0d6e865e232 +Author: d7a7 +Date: Sun Oct 31 16:21:19 2021 +1000 + + First full run on model, implemented accuracy and loss graphs. + + This model ran for 10 epochs and was receiving a Dice Coefficient of + 0.84 on its final epoch, this was without validation split however, so + testing results may be poorer. + + The functions to plot accuracy and loss have been completed with no + issues. + + Next to do is: implement test stage on and validation split training. + +commit 8e1aad7df72c515f1107ae3cb08671bddb669a15 +Author: Christian +Date: Sun Oct 31 16:19:47 2021 +1000 + + Update README.md + + Final README + +commit 9bd5a8d0014c23b980af0ed9b98aa0b77ea5f7c9 +Author: Christian +Date: Sun Oct 31 16:18:54 2021 +1000 + + Update Test Driver - Mask RCNN.py + + remove unnecessary libraries, fix code error (multiple commas) + +commit e8a9890278b1fa3da17535ef9c9304ed83b200d4 +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sun Oct 31 16:17:42 2021 +1000 + + the third version of yolo parameters + + max_batch 6000 -> 4000 + steps 4800,5400 -> 3200,3600 + +commit 6ed7a57025895532a90563652d8d65414bb81983 +Author: Christian +Date: Sun Oct 31 16:17:40 2021 +1000 + + Create MIT License + + This is the same license used by matterport and aktwelve + +commit 443d8a415da42ad7b99cbb80956d1931a95978a7 +Author: Lee Jian Yang +Date: Sun Oct 31 16:17:00 2021 +1000 + + training done, with accuracy and loss graph + +commit c1db821d3f01e4cc97670eccac2c1121b8c20e69 +Author: Tony +Date: Sun Oct 31 16:15:39 2021 +1000 + + Update readme + +commit a6c2389434a74754736d1f9adb0d33b1abf696d5 +Author: Tony +Date: Sun Oct 31 16:14:44 2021 +1000 + + images for readme.md. + +commit 9ca5ec954a58c6c8a8a72d562a6d69cec729afa1 +Author: MMMMMYY +Date: Sun Oct 31 16:13:43 2021 +1000 + + modified loss function and train function + +commit 65ea318537461e20949f5709e59ebd9bacaec5ac +Author: Tony +Date: Sun Oct 31 16:13:20 2021 +1000 + + another image for readme. + +commit 2f3d9eff4f8a183fd64bb7f2d6e0239e3b7ab88f +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sun Oct 31 16:13:14 2021 +1000 + + the result second version of parameters + + the result is very poor, probably because the overfit + +commit 66ebe4cd7af19c0efe3f4c53152de1b1c6397b35 +Author: Tony +Date: Sun Oct 31 16:12:35 2021 +1000 + + add more images for readme.md. + +commit b9a82a95f425dc08fd2bd89b06d0e06b95744b7e +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sun Oct 31 16:11:58 2021 +1000 + + the result of default parameters + + the result is not very good, need further improve + +commit 71b9e438a017345f0ce7b3734ded49f07bb440ec +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sun Oct 31 16:09:50 2021 +1000 + + Delete result_1.txt + +commit 0a08060d2303e68fdbaf164594bb73eef8f92454 +Author: EvaHolden +Date: Sun Oct 31 06:03:11 2021 +0000 + + Added TSNE embeddings plot + +commit a021633cface56634630d81e71b08026a18d25bf +Author: default-jamc +Date: Sun Oct 31 16:02:29 2021 +1000 + + Updated README, discussed model architecture. Added image of DSC formula + +commit f439bc05fe98beb11694bece45d3d61711d6c717 +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sun Oct 31 16:01:25 2021 +1000 + + the result of default parameters + +commit 7cb2cc8c32d451ed973b1bc36540065a5742a5e3 +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sun Oct 31 16:00:42 2021 +1000 + + second parameters of yolo + + as the result is very poor, I changed some parameters + batch 64 ->96 + max_batch 4000 -> 6000 + steps 3200,3600 -> 4800,5400 + +commit 5ebb18e4f3b775c769bdb7a391a932a22c9a6ad9 +Author: Richal Verma +Date: Sun Oct 31 15:59:31 2021 +1000 + + Add requirements.txt + +commit 9f885c2c110ba4aa14bea2dc263e95ec8af41105 +Author: tomdx +Date: Sun Oct 31 15:59:15 2021 +1000 + + Add PixelCNN creation and training to driver + +commit 5208391f065f3a6c63fcf7a202ce3acd9794e57b +Author: Richal Verma +Date: Sun Oct 31 15:59:12 2021 +1000 + + Add functions for loading OASIS data and training VQVAE with OASIS data that use constants defined at the top of the file + +commit fb211d34d60d3d470c15fd17a02481328287d07e +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sun Oct 31 15:57:50 2021 +1000 + + Update README.md + +commit a97ac1b934cf79ef5ba00095396aeacc837d4c93 +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sun Oct 31 15:56:33 2021 +1000 + + default parameters of yolo-v3 + + the first version of yolo-v3 parameters + +commit cd6ac505d2ea04ce6766acc33718041a3e28286b +Author: mparker2103 <64070555+mparker2103@users.noreply.github.com> +Date: Sun Oct 31 15:56:09 2021 +1000 + + Delete Improved_UNet.ipynb + + Saved google colab file to the wrong folder + +commit d7ff799d6d2db8dca9e6acdcff7bcc9febc31990 +Author: mparker2103 <64070555+mparker2103@users.noreply.github.com> +Date: Sun Oct 31 15:54:23 2021 +1000 + + Created using Colaboratory + +commit 9ef50ea9f625ecc0b560f3841619a7d5d5a6b36b +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sun Oct 31 15:54:10 2021 +1000 + + Update README.md + +commit f61f3b7e2899550e6cb1bce8080ffdbfeaf2a5b2 +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sun Oct 31 15:52:39 2021 +1000 + + Update README.md + +commit b94a1c0885ac571b44fe188e3c56fdefaa3bbd75 +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sun Oct 31 15:52:24 2021 +1000 + + Update README.md + +commit 548907a069012d3b53bbe19ded94fb3c295807ec +Author: Tony +Date: Sun Oct 31 15:52:09 2021 +1000 + + Remove from repo. + +commit d3845b1bed6689cda026df3baf649d3d1bfaaf57 +Author: Mark Coulon +Date: Sun Oct 31 15:51:56 2021 +1000 + + Had to rename the folder and add them back in + +commit 386b67626fa2b887ab11a3d951b302314951667a +Author: kamenii +Date: Sun Oct 31 15:50:48 2021 +1000 + + Added StyleBasedGenerator and Discriminator modules. Training parameters updated. + +commit 96a95cdcc874f36cb9a86339574c911cfe748b38 +Merge: 8eb741d2 3127564a +Author: Mark Coulon +Date: Sun Oct 31 15:50:16 2021 +1000 + + fixed merge conflicts + +commit 60ca06c7d6957c704891a87f19ef2757d53c2d78 +Author: Tony +Date: Sun Oct 31 15:49:18 2021 +1000 + + removed from repo + +commit 7e687fc1ceec81b114330d15fdfe70aa03ad8e0d +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sun Oct 31 15:45:48 2021 +1000 + + Add files via upload + +commit 32d22a21a93d335627be457b7028e19d98bab21e +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sun Oct 31 15:45:20 2021 +1000 + + Delete validandtest.ipynb + +commit 99639042fa457e08605d5b210eefe4c31b4893e3 +Author: s4581614 +Date: Sun Oct 31 15:45:11 2021 +1000 + + Added basic slurm script to test on Goliath + +commit 88e98c3d6534ed92738a07dcd50360236787f9ef +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sun Oct 31 15:43:40 2021 +1000 + + Update README.md + +commit 7ceea0dcb59aed1093a220f0854849d6935a53f2 +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sun Oct 31 15:41:48 2021 +1000 + + test code + + compute the result(F1 score, accuracy etc) with Intersection Over Union of 0.8 + +commit 6f821ecbdf34a51f01755e18f583d6ddd3aceb20 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Sun Oct 31 15:41:11 2021 +1000 + + Add reference for DSC function in readme + +commit 731fed5d74b76684dbf2dc1908c4003fc3171b41 +Author: MujiDipto +Date: Sun Oct 31 15:40:16 2021 +1000 + + completed dice_similarity function in utilities.py + +commit e8485168f54f3648bc42a3547d442d0d765e4029 +Author: Andrew +Date: Sun Oct 31 15:40:13 2021 +1000 + + deleted unnecessary files + +commit 8f0a4d0970306ae2a2c53bbe2cf1a4fbe5026f2d +Author: Andrew +Date: Sun Oct 31 15:36:06 2021 +1000 + + code for evaluation and display completed for improved unet + +commit d94ed342c1c5311440b1355af9f9a4b7dbea92f7 +Author: Kristian Thomassen +Date: Sun Oct 31 15:32:21 2021 +1000 + + Refactor args parsing + +commit 354306dd1acf4ed1362a91304654d3136af4d386 +Author: Chao-Chun Wu <52982031+white-segfault@users.noreply.github.com> +Date: Sun Oct 31 13:32:15 2021 +0800 + + Completed the cross Attention layer for the perceiver transformer architecture + +commit 2c117a734a28977bc10aa3fd3ba9537e0453b32f +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sun Oct 31 13:30:08 2021 +0800 + + Update README.md + +commit 38d2d3fcab937fabc799c508c0852e42ccb75b7c +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Sun Oct 31 15:30:00 2021 +1000 + + add comments + +commit 59bdb7c7e16ac5e7cb15a91f56440a9cb75c3253 +Author: Michelle Menesch +Date: Sun Oct 31 15:19:06 2021 +1000 + + Added the same preprocessing methods/code used for the OASIS data from Demo 2 driver.py. Need to style but code itself is working. + +commit a077e33e6aac8e8bc4c87267e80b5affab208f77 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sun Oct 31 13:18:47 2021 +0800 + + Update README.md + +commit 6154b6e445efba6db95e4acaafc1482a8ffe6e57 +Author: Christian +Date: Sun Oct 31 15:12:12 2021 +1000 + + Visualize 0 +Date: Sun Oct 31 15:11:09 2021 +1000 + + Fit the PixelCNN in the driver + +commit e6d1b37ba063e6f7e1e87362bf74fbe970aa2027 +Author: Christian +Date: Sun Oct 31 15:10:34 2021 +1000 + + Visualize Predictions, Original Image & Ground Truth + +commit fef8872168a79da67b2677a5eb776780be6c9f10 +Author: Andrew +Date: Sun Oct 31 15:08:26 2021 +1000 + + added augmentation to the data, model training and analysis methods added - improved unet + +commit e46037459ca521095892014334b7a1a2dbedbf07 +Author: Zhien Zhang +Date: Sun Oct 31 15:08:38 2021 +1000 + + Added more docstring and reformat the structures + +commit 5124c92de8f4a4a51ef371e9cc8464d1b4e0ccb7 +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 15:08:26 2021 +1000 + + Update README.md + +commit 85ccd0aa0df2bb23b69c8517a72742aadcc1355a +Author: d7a7 +Date: Sun Oct 31 15:07:30 2021 +1000 + + Created model.py file and implemented Dice loss metric. + + The model that was previously in model.ipynb and a version of it copied + into data_loading.ipynb has been moved to a standalone model.py file + that is called by the data loading functions. It has performed well in + testing and should need minimal updates beyond cosmetic. The + data_loading file now only contains functions neccesary to load and run + the data. + + The Dice coefficent calculations have been implemented in to + data_loading and have performed as expected. + + ToDo: Implement more advanced error tracking and display, and implement + testing functions for running the model post training. + +commit 857b5d04b71d54b6fc1c30ad8671f34bba4d2d34 +Author: default-jamc <88128966+default-jamc@users.noreply.github.com> +Date: Sun Oct 31 15:07:22 2021 +1000 + + Slight updates to README + +commit 8ae758b00fb11945cccd469786e8cf8ee70c31a5 +Author: Andrew +Date: Sun Oct 31 15:06:55 2021 +1000 + + adjustments made to segmentation layer of the model + +commit 5f5f507262ff9e43ecd20ee0d674b86180118b91 +Author: MujiDipto +Date: Sun Oct 31 15:03:52 2021 +1000 + + create utilities.py for displaying images and calculating DSC + +commit 4290ab676801559737709da989856064a45ead9e +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sun Oct 31 12:57:36 2021 +0800 + + Delete yolov3_custom.cfg + +commit 02a3e48f0ffa6b096d686d76c580f7646c55beae +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sun Oct 31 12:55:25 2021 +0800 + + Update README.md + +commit 5f59897eb7426af67277292e2cf8e4e30e533919 +Author: default-jamc <88128966+default-jamc@users.noreply.github.com> +Date: Sun Oct 31 14:49:54 2021 +1000 + + Added Improved UNet image to the README + +commit 5b9560712f691065b41afc88efecc1b2aeee736b +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Sun Oct 31 14:49:04 2021 +1000 + + add style mixing images and title + +commit e6f88a09c92e3a0b94500ee01918b9b508bcec21 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sun Oct 31 12:48:51 2021 +0800 + + Update README.md + +commit 5cba74cd6138cf509844b22f4b76bf0e9e6f82a2 +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Sun Oct 31 12:47:25 2021 +0800 + + Update README.md + +commit fcc5cf585d57ebdfd26c7de3c9f20319721c7516 +Author: tomdx +Date: Sun Oct 31 14:47:03 2021 +1000 + + Remove some numpy usages + +commit 09330bdd9231956ba406d843e44edbd5be02ea32 +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Sun Oct 31 12:46:20 2021 +0800 + + Update README.md + +commit 884c7f0a8b7463165469e96802ee0470a2509f99 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Sun Oct 31 14:46:00 2021 +1000 + + added data processing information + +commit c0e2af9bbb01039ba183a8ba61fa6fc36840f4db +Author: des-gan09 +Date: Sun Oct 31 14:45:53 2021 +1000 + + remove model import from main + +commit 3a9a47e687d6874e785d683c5ce3f335d99600a4 +Author: des-gan09 +Date: Sun Oct 31 14:44:53 2021 +1000 + + remove model file(not needed) + +commit 892177ec2f7b37a15ba76e6746aecdae09600c66 +Author: des-gan09 +Date: Sun Oct 31 14:44:11 2021 +1000 + + add comments and complete readme + +commit 79f446875b6066b2da03eb5ad2d0bf35af9e26bc +Author: Christian +Date: Sun Oct 31 14:43:42 2021 +1000 + + Update Test Driver - Mask RCNN.py + + added visualizations of the augmentations + +commit dd2ce2b0844692f99ffd92c113210efcf1e6d09c +Author: Christian +Date: Sun Oct 31 14:41:11 2021 +1000 + + Delete visualize_only_one_class.png + + not needed + +commit 6fde790802499ac28ebb6f902a42e4eae0754ecf +Author: Christian +Date: Sun Oct 31 14:41:03 2021 +1000 + + Delete visualize_image_mask.png + + replaced with mask in grayscale + +commit 9af151d5978dd2d61e9b77d6ea3fea4dec2b0686 +Author: Christian +Date: Sun Oct 31 14:40:36 2021 +1000 + + Visualize Image and Mask in loaded dataset + +commit 026ecc8349562d0fd8127cbb415b6d1b7179c7db +Author: Christian +Date: Sun Oct 31 14:39:57 2021 +1000 + + Update README.md + +commit 2f69d78340061d42debffb7ae2124253badc9e10 +Author: default-jamc +Date: Sun Oct 31 14:37:03 2021 +1000 + + Updated README, added image of UNet Architecture + +commit b8abb57d11358282a77ca27d74461d24d79827d3 +Author: Michelle Menesch +Date: Sun Oct 31 14:35:52 2021 +1000 + + Added dependencies/libraries to driver.py and model.py files + +commit a62aa510d97cbb412d19d0a878a2e51aea16f221 +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Sun Oct 31 12:35:45 2021 +0800 + + Update README.md + +commit 0e7b620a9f80844f2bb98814c95207ccec9bd57c +Author: Tony +Date: Sun Oct 31 14:34:24 2021 +1000 + + add images + +commit 6f0697e4ffe35f325bb1e84869e90e77afce2349 +Author: Michelle Menesch +Date: Sun Oct 31 14:33:09 2021 +1000 + + Added dependencies to README.md file + +commit 3da78812d214baca5d829c53419ffc9e5f0adb8f +Author: AndrewLuong6 <51429490+AndrewLuong6@users.noreply.github.com> +Date: Sun Oct 31 14:32:24 2021 +1000 + + Fixed bugs in UNET Model + + Fixed some bugs within the last few convolution layers of the model. + Added an output heading within the README. + Added the output of the model's loss, accuracy and dice coefficient. + +commit 5b585c121cda4393d654ba0de467618fca6c3c50 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Sun Oct 31 14:31:33 2021 +1000 + + Add input and mask images + +commit ddaa476775ee07f081035f8ea606d114eac18a16 +Author: wahsnitram +Date: Sun Oct 31 14:30:54 2021 +1000 + + Create two primary files + + Started project, included possible imports for the the files + +commit 818e23974aa785f1a37de26d7f129e7d4eabd658 +Author: Shravan Shivpuri +Date: Sun Oct 31 14:29:37 2021 +1000 + + Link to GH in README.md + +commit 196b740f0d97c84fd0e2f39dacee8b32496fbc55 +Author: Christian +Date: Sun Oct 31 14:29:36 2021 +1000 + + remove results from old model + +commit ee4e392478cd0f23673c5f06023b3d6585e3ade6 +Author: Christian +Date: Sun Oct 31 14:29:01 2021 +1000 + + Create training_augmentations.png + + Visualize Augmentations applied during training + +commit 18debb03c91cfa36d8f8b038b04cef66bf7f696e +Author: Christian +Date: Sun Oct 31 14:28:22 2021 +1000 + + Create resolution_distribution.png + + visualize image resolutions + +commit 5a2abe03f5144aea7d5541bcb8a61d099f6e19db +Author: Christian +Date: Sun Oct 31 14:27:38 2021 +1000 + + Create pre_processing.png + + visualize augmentations during pre-processing + +commit 47e13f37d8bd03dfd40236cd878f9155760834d3 +Author: Christian +Date: Sun Oct 31 14:27:22 2021 +1000 + + Delete display loaded image and mask.png + +commit 94663febbb647c2d23a4099f655d523411e5a1b5 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sun Oct 31 12:27:19 2021 +0800 + + Update README.md + +commit 67e69699f6b01d98ff92e00795dc169291178f8a +Author: Christian +Date: Sun Oct 31 14:27:12 2021 +1000 + + Create mask_rcnn architecture.png + + Mask RCNN architecture from original Mask RCNN paper + +commit d96f8b7a40e778297f5e6089bc76c8077aa8ac83 +Author: Christian +Date: Sun Oct 31 14:26:39 2021 +1000 + + Create boxplot_ious.png + + Visualize the IoU score for each image + +commit 5da74d1918276a9abb610f56013345605fe0e869 +Author: Christian +Date: Sun Oct 31 14:25:59 2021 +1000 + + Replace old model loss with updated one + + Trained model again and showed loss metrics + +commit 9067d31ef697d2c6337727bd5b6403e70cdc2c7c +Author: Christian +Date: Sun Oct 31 14:24:35 2021 +1000 + + Create Test Driver - Mask RCNN.py + + Rename dataloader.py and modify content to automatically run everythin + +commit 517b9223e13b119a83c31da137745a92ff99e8cf +Author: Humphrey Munn +Date: Sun Oct 31 14:24:17 2021 +1000 + + added readme, fixs to fourier feature calculations and data loading + +commit cba5684163dee1895c16e6cdfbd8c305a33231ab +Author: MujiDipto +Date: Sun Oct 31 14:23:36 2021 +1000 + + add input scan and its mask images + +commit 48010ac5617354f6ebfb9ee721b859f0ccc093c3 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Sun Oct 31 14:22:12 2021 +1000 + + added dataset information to readme + +commit a3d42011b5aa8bf3ba2dc181b678b16af47d8aa1 +Author: Christian +Date: Sun Oct 31 14:21:56 2021 +1000 + + Update data_splitter.py + + Move running the datasplitter function to Test Driver - Mask RCNN + +commit 5206be3b3d9fc568626717f18581dae60233f854 +Author: Christian +Date: Sun Oct 31 14:19:54 2021 +1000 + + Update README.md + +commit e5c9d8ff601826beaec403f39e58b32dc5d3a1b6 +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 14:18:25 2021 +1000 + + update requirements + +commit 89c0f1b12b050229cf080e1a2a8cd75b9e22692a +Author: Richal Verma +Date: Sun Oct 31 14:17:11 2021 +1000 + + Change GatedPixelCNN to a standard PixelCNN since generation didn't seem to be working correctly with the GatedPixelCNN. Also make some modifications to the architecture of the PixelCNN + +commit bb455147559d93319f20a6d39fe1d978b915a3ed +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Sun Oct 31 12:13:13 2021 +0800 + + Update README.md + +commit 4455c64b33eab1e0bce4747aa40c2fd77f9fcce3 +Author: Shravan Shivpuri +Date: Sun Oct 31 14:12:09 2021 +1000 + + Added docstring for augmenter. + +commit 31f8c9947a4edbecc62f5a8a92cc1fd3eceda954 +Author: tomdx +Date: Sun Oct 31 14:09:19 2021 +1000 + + Reduce latent space of encoding to prevent the pixelcnn from runniong out of memory + +commit a525b6c37d0e058dffa201c1480aa5005ead1e59 +Author: joe86726 +Date: Sun Oct 31 04:08:53 2021 +0000 + + update comments + +commit e7e462912d66ddbf0040dd88c4429e36b297f212 +Author: tomdx +Date: Sun Oct 31 14:08:47 2021 +1000 + + Add image generator + +commit 3a52bcc342e3131ddd935f9c28315c009e954dd2 +Author: ltaylor231 +Date: Sun Oct 31 14:08:25 2021 +1000 + + previous image loading fix wasn't complete, should load images properly now + +commit c46fe1a1db61a40f3dc8113da9274bcfd7d22df6 +Author: ltaylor231 +Date: Sun Oct 31 14:06:46 2021 +1000 + + small change to README to fix image loading problem + +commit d56cf411e263eb4bf31000523f3e2a737eefa5ff +Merge: 9e746a0b 43b7ec1f +Author: joe86726 +Date: Sun Oct 31 04:06:34 2021 +0000 + + update README.md + +commit 628af223872d9f28562010f8789ea16932a5721d +Author: Shravan Shivpuri +Date: Sun Oct 31 14:05:18 2021 +1000 + + Finalised README.md + +commit 9e746a0b2bc443a011ee91907b0a00d341d2e8d7 +Author: joe86726 +Date: Sun Oct 31 04:05:16 2021 +0000 + + added comments and removed old code + +commit 3807b533bd71b7255a783954472dbce7dbed1bba +Author: Zhien Zhang +Date: Sun Oct 31 14:05:12 2021 +1000 + + Remove latent mapping to fix the mode collapse + +commit 50fe40e604257e8cb775d2cb74d2919801fba99f +Author: Tony +Date: Sun Oct 31 14:02:06 2021 +1000 + + Draft done. Waiting for images. + +commit 8cb17dcbf30bc22bd5ad213e21b02b4150629625 +Author: Aryaman <58369369+aryaman4152@users.noreply.github.com> +Date: Sun Oct 31 13:56:24 2021 +1000 + + Fix image absolute paths + +commit 5739690bdff74b29094630122dbbef88ee2f62f3 +Author: Aryaman <58369369+aryaman4152@users.noreply.github.com> +Date: Sun Oct 31 13:54:13 2021 +1000 + + fixed images + +commit 2ff3fae8c244105892a7343515a326992f296419 +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Sun Oct 31 13:53:13 2021 +1000 + + Fixed Shape issue and Implemnted Batch Repeat + +commit 79f599cc7cb85715e94ff22515cb11b03481f17e +Author: Aryaman <58369369+aryaman4152@users.noreply.github.com> +Date: Sun Oct 31 13:51:59 2021 +1000 + + Fixed images + +commit 65693f7a3229d7ee324a06e449c5c326f272304c +Author: aryaman4152 +Date: Sun Oct 31 13:50:03 2021 +1000 + + Updated README, added images + +commit e88b5c518222b2c4cec973d040977836c97f890a +Author: ltaylor231 +Date: Sun Oct 31 13:49:44 2021 +1000 + + Added more documentation and removed commented out code in model and driver. Added referencing to README. updated example results plot. + +commit 43b7ec1fa9049a72f06a4a6db6358e2fd5e37d85 +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 13:48:39 2021 +1000 + + Add files via upload + +commit d14a4c41c139f1d99e7fd5063c303c393831fe61 +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 13:48:06 2021 +1000 + + Delete 96097a522ee08b0721e0753d2355819.png + +commit ce1b1e43d3f745834fe4cb86d9d9e48f817b9f4d +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 13:47:49 2021 +1000 + + Delete 2b8c387b198eefedbeca6bd51f154ea.png + +commit c20e6d3dbab1a4f9a2104a248bcaae6cb2a8f2e0 +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 13:46:23 2021 +1000 + + update images + +commit a4c3df1024a0066c549a91f149854453fb1e5b97 +Author: RobEldo <43310214+RobEldo@users.noreply.github.com> +Date: Sun Oct 31 13:37:37 2021 +1000 + + Adding additional images for README documentation + +commit 14e69550719fe5923d99b9eaf19fcb89dded3a1b +Author: MujiDipto +Date: Sun Oct 31 13:33:44 2021 +1000 + + model is now stable. Added missing inline comments + +commit 87e06c557515a0990948759cf679a087987ae542 +Author: aryaman4152 +Date: Sun Oct 31 13:25:46 2021 +1000 + + Added README.md + +commit fcfca4987de3468f68b8599fe22087c79d48bae3 +Author: MujiDipto +Date: Sun Oct 31 13:24:50 2021 +1000 + + changed the number of filters for segmentation layers, moved the segmentation layers to their levels to be more in line with the annotated model image + +commit 097837a35e55a1ffc03fa14980222ec5d2b1f77f +Author: EvaHolden +Date: Sun Oct 31 03:18:20 2021 +0000 + + Changed model from supervised split to semi-supervised split - this version has around 71% test accuracy + +commit 5de5b8a1cdfb533f259b7820c6ab2f3117b7fb4a +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 13:11:54 2021 +1000 + + update README.md + +commit dfa05c2286e5cc3c8f363a1b25c2333d072834e1 +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 13:11:08 2021 +1000 + + update README.ms + +commit 5bc4e754dc0dcf594de8c49dc05f1e7cc3cb8d54 +Author: MujiDipto +Date: Sun Oct 31 13:06:38 2021 +1000 + + Started debugging model.py, separated out the layers to make it easier to read. Looking at shapes of layers + +commit cd42a964791ec10ebf65bfa4d6a71f835206ce6e +Author: zaragolshani +Date: Sun Oct 31 14:04:30 2021 +1100 + + fixed a bug with pad variable + +commit f77e833f486c53be2cdb50d6d0d9dcdd561d2f11 +Author: Anthony North +Date: Sun Oct 31 13:03:51 2021 +1000 + + rename headings for clarity + +commit 03e893e8b0f77e730ca228dd3e2919092982c077 +Author: MujiDipto +Date: Sun Oct 31 13:03:02 2021 +1000 + + fixed the loss function, model still unstable. Debugging the expansive path + +commit 4dd550b1bbe9051ba847effcd88a27ae7f4628b0 +Author: Anthony North +Date: Sun Oct 31 12:59:37 2021 +1000 + + experiment description, rewording + +commit a2dbf4281f43c3e99a9d9f899cc3c52cf0e84466 +Author: zaragolshani +Date: Sun Oct 31 13:59:30 2021 +1100 + + updated detection function to initiate model + +commit 4729b93f98cfcb8101d7e0da23a4c7a51a29f0e3 +Author: zaragolshani +Date: Mon Nov 1 00:26:11 2021 +1100 + + changed the name of the class config file + +commit 07e0f7a6b82dabb047f47e56f9098a1103d5e8a3 +Author: zaragolshani +Date: Mon Nov 1 00:21:05 2021 +1100 + + added libraries and dependencies to the script + +commit e09ea77cffdf2f5042a782d4de3626749f80aad6 +Author: zaragolshani +Date: Mon Nov 1 00:16:56 2021 +1100 + + added configuration of pretrained model + +commit 1f8ce961312da589257a6f07ff4f9bbdd665873d +Author: zaragolshani +Date: Mon Nov 1 00:15:30 2021 +1100 + + added configuration file of class names + +commit 3dbe5f7133f1a15c352125a48194dc5531e126b6 +Author: zaragolshani +Date: Mon Nov 1 00:14:17 2021 +1100 + + added data config file + +commit 65c6d80235f275514db96a774579747ded62bb04 +Author: zaragolshani +Date: Mon Nov 1 00:12:24 2021 +1100 + + add a cloned script to parse the config files + +commit 5779415a0bb18fca5e8ce8baaed76c95e0a2edd9 +Author: zaragolshani +Date: Mon Nov 1 00:06:24 2021 +1100 + + created driver script ro train the model and run detection + +commit ed41a2aed3a80ecea93be26005daf620f58a1d49 +Author: zaragolshani +Date: Sun Oct 31 18:36:45 2021 +1100 + + added the script of the utility functions for model in inference mode + +commit d9df0fa513442e2a95211142423354ebdf5feee4 +Author: zaragolshani +Date: Sun Oct 31 18:31:38 2021 +1100 + + darknet model defenition script + +commit 029b115b78fbac124defa4fab93c7b7bb5433ade +Author: zaragolshani +Date: Sun Oct 31 16:27:56 2021 +1100 + + created object detection script + +commit 4341cd17e4b4cc898679c33c7196708554095bca +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sun Oct 31 12:57:01 2021 +1000 + + Add files via upload + + use darknet to train the yolo v3 + +commit 659dfa8bc11862ade29190c7d479f0ed934d4232 +Author: Joshua +Date: Sun Oct 31 12:52:37 2021 +1000 + + Added Results and Discussion in README + +commit 171cf14beb44bd1391c0bbec5e597c61a8a60697 +Author: RobEldo <43310214+RobEldo@users.noreply.github.com> +Date: Sun Oct 31 12:46:29 2021 +1000 + + Started write-up and testing Git Markdown Syntax + +commit 0a929a4c0fb1dc5885e4196fad3d509b88275018 +Author: Nifu +Date: Sun Oct 31 12:34:24 2021 +1000 + + Add README documentation for the objectives and instructions + +commit b66d652ebc3a4e9a14afd71cac2b42fba6bb6e9f +Author: RobEldo <43310214+RobEldo@users.noreply.github.com> +Date: Sun Oct 31 12:22:00 2021 +1000 + + Add diagram of the two-stage VQVAE algorithm + +commit 18e5870b218b3b22d2dfc71610151830b7995c7a +Author: AnqiYan <781236437@qq.com> +Date: Sun Oct 31 10:17:23 2021 +0800 + + Added some result images + +commit c0ec8f87091f749aeffbf17d518dc88e3fc8ec16 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Sun Oct 31 12:16:55 2021 +1000 + + add show grid images + +commit c6d8ee467716020c22fe159cf6682f16099a28c8 +Author: AnqiYan <781236437@qq.com> +Date: Sun Oct 31 10:15:56 2021 +0800 + + Modified metrics as DSC + +commit bab633791912ef612910c622af301694064878c6 +Author: ByronDowney +Date: Sun Oct 31 02:07:19 2021 +0000 + + Fixed another bug with the splitting of the dataset after realising that it was loading as a BatchDataset. That also solved my problem of not being able to use a dice coefficient loss function. Model is now producing decent results, though not dice > 0.8 yet + +commit 2a22067a29b4dbb268838e0697f1db02322d12c7 +Author: Richal Verma +Date: Sun Oct 31 12:06:43 2021 +1000 + + Implement GatedPixelCNN training and image generation for MNIST by generating a latent space based on a prior and then using the decoder on that latent space + +commit 4202c1259a4bd0cfc8923107ee922e7ec879bf52 +Author: AnqiYan <781236437@qq.com> +Date: Sun Oct 31 10:01:00 2021 +0800 + + Modified DSC function and Added DSC_loss function. Added some comments + +commit 0c8632cf0a55cf4cf04bfbd90d67d696a7007a3d +Author: yousifpatti +Date: Sun Oct 31 11:50:02 2021 +1000 + + Fixed an issue with caused by removing numpy.zeros + + Remvoing numpy.zeors and replacing it with tf.zeros caused the issue of returning an Eager tensor object instead of an array and as such was throwing not assignable error. To fix I converted the tf.zeros object into an array after it was created in both driver.py for the priors and in model.py for the PixelCNN model. + +commit d9ad8dc1b1bd4da5164c747ff57a7c30e021f84d +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Sun Oct 31 11:49:55 2021 +1000 + + Improve Report + +commit 52907473859950d3dc7020dd6bdad9618e223b78 +Author: Khac Duy Nguyen +Date: Sun Oct 31 08:27:02 2021 +0700 + + Fix the attention + +commit 02f465b2f615a86dc15e9a8f636c18bd5a1e9fcb +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Sun Oct 31 11:05:46 2021 +1000 + + Fixed Small Bugs with Fourier Encode + +commit 51a83e92aa9a127ee2c51b3d4ccf9dfa80cec5d1 +Author: Nifu +Date: Sun Oct 31 10:59:08 2021 +1000 + + Add author information + +commit 9c74350710c860254f1cdd3a2a57097578664f45 +Author: Khac Duy Nguyen +Date: Sun Oct 31 07:40:40 2021 +0700 + + Adding evaluation and change the data preprocessing + +commit 93a01eb2363a44f45cfab99f63468b4270c36510 +Author: Anthony North +Date: Sun Oct 31 10:24:35 2021 +1000 + + citations: remove abstract & keywords, add deepmind research github repo + +commit 64efe8d4f4c7ae0549453dd8a0feb3df95408b24 +Author: Khac Duy Nguyen +Date: Sun Oct 31 07:04:12 2021 +0700 + + Change loading dataset + +commit aea891c44c0796916d1601ecc02cb4ce94d4fd93 +Author: Ahmed +Date: Sun Oct 31 10:00:57 2021 +1000 + + validation acc not working; fixed importing data i think + +commit 1504b6bf0f5ffcb031fbf70cb549649c5e2751f3 +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Sun Oct 31 09:48:53 2021 +1000 + + Removed Code Output From file + +commit a042cc39667abcfc7986e015142b01fb7ec6bc06 +Author: Rick W +Date: Sun Oct 31 09:43:38 2021 +1000 + + Print nicer output and update readme + +commit 2b35c189f4d719160323bf6eba953e6c657ea6d6 +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Sun Oct 31 09:39:27 2021 +1000 + + Model finished and working with ~70% validated accuracy. + +commit a81fda2c055f32f6d3fa7e71f7c023427d534041 +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Sun Oct 31 09:38:44 2021 +1000 + + Model finished and working with ~70% validated accuracy. + +commit 080fa8e0aee220a313da7f065a0688b28de464dd +Author: Zhien Zhang +Date: Sun Oct 31 09:35:10 2021 +1000 + + Remove unused package from setup.py + +commit 6561c4fcd7af74479af943fec3c62e4c302adc2d +Author: Zhien Zhang +Date: Sun Oct 31 09:22:59 2021 +1000 + + Replace AdaIN with mod/demod to see if the mode collapse can be fixed + +commit 1bfd4948b80db0e094c2d3d4605e1ddb33c57e26 +Author: ByronDowney +Date: Sat Oct 30 23:18:16 2021 +0000 + + Fixed bug with the splitting of the dataset. Changed approach to resizing/padding again, now resizing everything to (324,324) because computer was running out of memory when images were too large e.g. (3354, 2230) + +commit 13264404d83a3586c6086bf6899f2894f0bbcdb5 +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Sun Oct 31 09:10:31 2021 +1000 + + Trying validation code. + +commit 98d191c8bf6edccbe71915679870895f6ec85cfe +Author: Andrew +Date: Sun Oct 31 07:41:25 2021 +1000 + + slight adjustments to the model and model training methods added to driver- improved unet + +commit 0971591578f535ab6d763ce7fef25b9f37d970da +Author: Tony +Date: Sun Oct 31 07:36:27 2021 +1000 + + Test table in remote. + +commit 3f416fa2f53ee5881d20dbb58b9550ec59e6e085 +Author: Chegne Eu Joe +Date: Sun Oct 31 04:28:30 2021 +0800 + + Refactored cross/self attention layers. Pending perceiver refactor and logits fix + +commit 16c165f507fc0371a7105e082563ed4871e3d8e9 +Author: Chegne Eu Joe +Date: Sun Oct 31 03:41:44 2021 +0800 + + Experimental perceiver layer implemented + +commit 85e386542c4154f77224174b643e89ad1c4154c5 +Merge: 080ca7d9 2d9da550 +Author: joe86726 +Date: Sat Oct 30 19:18:57 2021 +0000 + + pull + +commit 080ca7d9f8c00c2d512bf23f219fae3bf3935f6f +Author: joe86726 +Date: Sat Oct 30 19:17:21 2021 +0000 + + Images folder + +commit 2d9da550aefa29cc9bf39824fb2e70c1dc17227c +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 05:11:49 2021 +1000 + + Create README.md + +commit 7963e6c0397290a4aee284d688ed5ec36a6ce7df +Merge: 3f01f6d9 2e94fcbb +Author: joe86726 +Date: Sat Oct 30 19:10:49 2021 +0000 + + ??? push issue + +commit 2e94fcbb2c6430f62153239b891c21c2897c9c35 +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 05:05:37 2021 +1000 + + Delete styleGAN_residual.ipynb + +commit 22041b4bd6cc8aebfe9fccd5f137de0e53a02ed7 +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 05:04:40 2021 +1000 + + Delete README.md + +commit 3f01f6d9f110a7648dc4aeb16b1627580300ec21 +Author: joe86726 +Date: Sat Oct 30 18:51:44 2021 +0000 + + modified train.py, added generate.py, comments and loss plot + +commit 5c3a50cc53ac03ccc40dc90a2339598420e08604 +Author: xiaofangchen +Date: Sun Oct 31 02:42:01 2021 +0800 + + undate model&methods and add data generator + +commit 528a9f9d130aea5c2433898d8c97c82ecb2e1bdc +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 04:38:23 2021 +1000 + + Update README.md + +commit 95bff92ebee8bcd7030916fa2960219b60be040b +Author: Andrew +Date: Sun Oct 31 04:07:18 2021 +1000 + + improved unet model compiled in driver + +commit a75da30b7b367776bf55996bed45faa25d0e472d +Author: Andrew +Date: Sun Oct 31 04:06:53 2021 +1000 + + minor errors fixed in model.py for improved unet + +commit 8f2dfd13b179baea2ce223a623294b27888f459a +Author: Khac Duy Nguyen +Date: Sun Oct 31 01:01:59 2021 +0700 + + Update Data Preprocessing and Script + +commit cc96843af908356df05278801b3b9fa613b64b97 +Author: Andrew +Date: Sun Oct 31 03:47:20 2021 +1000 + + data loaded into driver.py for improved unet + +commit 9e2c1bed534da2241699fc8a78875518cb5a7a14 +Author: Tompnyx +Date: Sun Oct 31 03:34:44 2021 +1000 + + Added README.md again due to file name change. Changes should now be seen. + +commit cc752d88e39e4b357f642f5b919b42fb3f7bc1a0 +Author: Tompnyx +Date: Sun Oct 31 03:31:58 2021 +1000 + + Added MaxPooling to UNet model. Removed filter stride parameter to solve invalid dimensions when concatenating layers. Started work on README.md and added references. Fine-tuned parameters in driver.py to try and achieve a better testing rate. Changed image height and width to 256. Changed Model's optimizer back to adam. + +commit 7444408bb02f9983a90df7c046b8f9fa9c26f3cf +Author: yousifpatti +Date: Sun Oct 31 02:29:54 2021 +1000 + + Added simple requirements.txt file + + Added the requirements for the project in the file consisting of 3 libraries. + +commit 3bc214290b4f48859779989d80e700af1bef6a1e +Author: Andrew +Date: Sun Oct 31 02:25:49 2021 +1000 + + load img method added driver of improved unet + +commit a0a1ecb0b54fffa4431594dbc3e52c6fd213293d +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sun Oct 31 02:05:40 2021 +1000 + + Update train_stylegan.ipynb + +commit 90654b43d7586fcd7f773f035f202fa89e29c3a9 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Sun Oct 31 01:57:01 2021 +1000 + + Add script to setup GPU server + +commit ba264b297decddd5dfc1ed39a7ae3074236fb971 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Sun Oct 31 01:56:46 2021 +1000 + + Add loss function, fix typor + +commit 58a054af0d931cc70f1f0b3c99f4c90f40901975 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Sun Oct 31 01:56:21 2021 +1000 + + Add data preprocess script + +commit 29da3af6625593a26af45b913ee89b89a7536765 +Author: yousifpatti +Date: Sun Oct 31 01:53:59 2021 +1000 + + Added comments and cleaned up code in driver.py + + Added comments to both data_reader and driver files. + In driver file I made changes to the data_variance variable by setting it to 0 as it is not used for the current model due to the data large variance. + Trained the data for 100 epochs and removed the use of numpy library by replacing numpy.zeros with tf.zeros. + +commit 935fde84c49573433448bc2a364c0468c2e69dd6 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Sun Oct 31 01:51:01 2021 +1000 + + Fix editorconfig + +commit 0a5155219ab212d036cb42ca7c7a5c6f9e86c832 +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sun Oct 31 01:46:48 2021 +1000 + + Add files via upload + +commit c3fddffb69eac0814dc97553e5408f832b32c500 +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sun Oct 31 01:46:24 2021 +1000 + + Add files via upload + +commit 27c54ab853fed2220c3cb4d1cb221674ea6f629f +Author: AndrewLuong6 <51429490+AndrewLuong6@users.noreply.github.com> +Date: Sun Oct 31 01:41:08 2021 +1000 + + Created README + + Created a README file without images currently. Also made some minor changes inside the driver file regarding predictions output. + +commit 4d5c5f74018c818987fd2a10117e848010fcbc81 +Author: yousifpatti +Date: Sun Oct 31 01:34:52 2021 +1000 + + Added comments and PixelConvLayer and ResidualBlock + + I added comments to all model classes and added a new class for Pixel CNN which uses a referenced code version as well as the residual block which is referenced within the pixelconvlayer. + +commit 7ca95937136eb4a9c3bcc2740da3224a69fc2a44 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sun Oct 31 01:31:01 2021 +1000 + + Update train_stylegan.ipynb + +commit b733c00db686f80c434c2acc9639ae7a65cc3717 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sun Oct 31 01:30:53 2021 +1000 + + Update Model1.py + +commit 2e6d0edfeed6b7eb443f1584b2b6fee156a618a1 +Author: des-gan09 +Date: Sun Oct 31 01:21:03 2021 +1000 + + add images + +commit 9e8463fa4d15c90447dcfb32803e946b58b874a0 +Author: AndrewLuong6 <51429490+AndrewLuong6@users.noreply.github.com> +Date: Sun Oct 31 01:05:00 2021 +1000 + + Added comments to driver.py + + Added docstring comments to driver as well as moving general function calls into a main function. + +commit 938adf4f8e3652341df107772e5c49bcf0a92797 +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Sun Oct 31 00:59:31 2021 +1000 + + Update README.md + +commit e99e831a64912196da34ea3462b925788a971b8d +Author: Muhammad Wildan Aziz +Date: Sun Oct 31 00:57:13 2021 +1000 + + Reformat and done implementing data preparation + +commit fc3d2e1205076eaa7760bfc9f2cca5c16519358c +Author: Muhammad Wildan Aziz +Date: Sun Oct 31 00:50:06 2021 +1000 + + Convert matrix to tensor + +commit b43efb791f718fcd77218870b44de8cf689dd43f +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Sun Oct 31 00:43:58 2021 +1000 + + Changes to model shape/size while training during the day + +commit 0039e64bc85c71990a1f40d1eb5f7e2076acd333 +Author: Muhammad Wildan Aziz +Date: Sun Oct 31 00:38:16 2021 +1000 + + Add adjacency and features matrix normalization + +commit d9951b30c00cc819fdad13020b98181e20654331 +Author: AndrewLuong6 <51429490+AndrewLuong6@users.noreply.github.com> +Date: Sun Oct 31 00:35:39 2021 +1000 + + Added comments to model.py and fixed stride bug + + Added docstring comments and general comments to model.py file. Also fixed a possible bug with the segmentation layers having incorrect kernel sizes. + +commit ef5d7212938adc221440bca537df53603bbbdb11 +Author: Muhammad Wildan Aziz +Date: Sun Oct 31 00:30:46 2021 +1000 + + Convert categorical value and split target + +commit 2fadebcc4c5b41b5a55d922df5a147fb8e8f43da +Author: Muhammad Wildan Aziz +Date: Sun Oct 31 00:27:38 2021 +1000 + + Create adjacency matrix & load nodes features + +commit 45e2d9f8a0fae64be83430222166b0e2e332753c +Author: Muhammad Wildan Aziz +Date: Sun Oct 31 00:21:39 2021 +1000 + + Load facebook dataset + +commit 26e6c344f820d686f0579e81561d6a7e062e070e +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 00:11:18 2021 +1000 + + Rename readme.md to README.md + +commit f9eecbe6ff948ec8147179a4ad8f25e58b4d9baa +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 00:09:49 2021 +1000 + + Update readme.md + +commit 125920a6a67af45c39eb04682d1445f6fd90a77d +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Sun Oct 31 00:09:16 2021 +1000 + + Update README.md + +commit d94cd3b5f29bfe4084b4e51a32da7511367d4538 +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Sun Oct 31 00:08:07 2021 +1000 + + Reorganised and tidied up code. + +commit 943b51cf22f8950218b3f37b3d46938ca3e3a891 +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 00:02:11 2021 +1000 + + Update readme.md + +commit 8725cab3f1e57cf1afaafcdb7f35d23303f26e9d +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 00:01:29 2021 +1000 + + Update readme.md + +commit eec7dce1a263771629e54ab4d8bcb91c7f56be0e +Author: joe86726 <64058748+joe86726@users.noreply.github.com> +Date: Sun Oct 31 00:01:04 2021 +1000 + + Create readme.md + +commit 9366864939a5e4a6eb66d396ffed5ae4b6fd97ad +Author: Shravan Shivpuri +Date: Sat Oct 30 23:57:34 2021 +1000 + + Added README.md (in progress) + +commit 4684eef54fb84f2b942fd8d659ee79e33e488b40 +Author: Muhammad Wildan Aziz +Date: Sat Oct 30 23:54:02 2021 +1000 + + Initial commit + +commit cc15340bfba4f6fd26c9a9075dc85e0a3f54d430 +Author: JoeHolownia +Date: Sat Oct 30 23:43:18 2021 +1000 + + More refactoring, writing README.md and commenting code + +commit 14c6572727f44b3b6cac752277793f8f7599870f +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sat Oct 30 23:28:13 2021 +1000 + + Add files via upload + + second version of yolo parameters + +commit 5a830ddea17a564664485bf6d4e6cbf219c85d7e +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Sat Oct 30 23:09:56 2021 +1000 + + Finished model with TSNE plot, training and testing. + +commit facfde8cf1026362bb007b93439b7faaf208d55f +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 23:01:22 2021 +1000 + + Update README.md + +commit da0d249be6a5da46d4b762b99f6bd2998eae4cff +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 22:58:58 2021 +1000 + + Update README.md + +commit 6049da851b260dc4e40dfea82421700ed6f159d8 +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sat Oct 30 22:53:06 2021 +1000 + + Add files via upload + + use ground truth to label the img + +commit c400abc7fb191d7258f00702955845e3f118dc57 +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sat Oct 30 22:52:33 2021 +1000 + + Delete label.py + +commit 5bd80c1ae02d99f4900850968546373233215dcd +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sat Oct 30 22:49:40 2021 +1000 + + Add files via upload + +commit 44ce44a969c61689fcbc8894424ea7898cdf37de +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sat Oct 30 22:49:02 2021 +1000 + + Delete label.py + + some problems with the label program + +commit 33ce80b2558401e8cbc788e6802e2c1036e462a7 +Author: yousifpatti +Date: Sat Oct 30 22:37:14 2021 +1000 + + Added full history plot and basic pixel_cnn starter code + + Added plotting for all the three loss values including total loss, recon loss and vqvae training loss. + Added the required code to run the pixel cnn however, the model is still being developed at the moment. This runner code will help debug pixel_cnn netwrok once implemented in the other file. + +commit 2830a4165130ff1d35f64872350507bd94d54947 +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Sat Oct 30 22:37:00 2021 +1000 + + Transformer with Attention Completed + +commit 3ae0bacc16e6b6563f588959d4d1b86fe4f9d6b6 +Author: Anthony North +Date: Sat Oct 30 22:13:28 2021 +1000 + + short description of perceiver, classification experiment + +commit 79d206e72478d833ee1e2b5fe1e1c4a9ef6b0abc +Author: des-gan09 +Date: Sat Oct 30 22:09:35 2021 +1000 + + fixed changes to unet (low dice coefficient) + +commit b3d82d8ceb7d0b174389fd692507aed607a27690 +Author: borova-siska +Date: Sat Oct 30 22:08:28 2021 +1000 + + added restore_model script + + Adding goliath script for restoring a saved model and saving the labelling on the first test image. + +commit 33932d94da640fb618c7d18b22f44508447051fa +Author: d7a7 +Date: Sat Oct 30 22:06:20 2021 +1000 + + Got left out of the previous commit. + + See previous commit message for updates to data_loading + +commit 846acac70b051843672b199abd76185b568958eb +Author: d7a7 +Date: Sat Oct 30 22:02:57 2021 +1000 + + Small update to model and assistant functions + + Started research into implementing DICE coefficent, experimented with a + softmax final activation layer, gave worse results but may have been a + result of no dice error rate guiding model and it not being given more + than one epoch to train. + + Also spent longer than I should've to find out that matplotlib auto + add a colour scale to their plots and hence causing it to display yellow + and purple instead of black and white. + +commit 1fb94d520b0200c8bc0116135dbf4885d9028284 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 21:33:53 2021 +1000 + + Update Model1.py + +commit 3aded2b547837cf55ad1676a71e399b96e243596 +Author: zaragolshani +Date: Sat Oct 30 22:19:31 2021 +1100 + + changed the value of fill parameter for transform.pad + +commit 88dd92c2ae0a0559c14f12b8ae788b6a87216a4c +Author: Joshua +Date: Sat Oct 30 21:12:14 2021 +1000 + + Added Results to Directory, Training Model completed + +commit fde819352a872c10b302b533d8dd482e8f22ad88 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Sat Oct 30 21:09:50 2021 +1000 + + Create train.py + +commit 663963ab73193decd163a7e1bfda27f4e1743687 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Sat Oct 30 21:09:42 2021 +1000 + + Create test.py + +commit ad0d7182ee370761a10b2c4714a81d4fbbb08161 +Author: Richal Verma +Date: Sat Oct 30 21:05:06 2021 +1000 + + Name VQ VAE layers + +commit 86015cf5f42b1d2a07143fbdef9f2b7bdd54333a +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 20:57:30 2021 +1000 + + Update README.md + +commit 82a9cd00a766a76ecb3d0bdebc2ef7c8adc2b80a +Author: Richal Verma +Date: Sat Oct 30 20:56:33 2021 +1000 + + Fix minor syntax error + +commit a25b8b7c2b7821b02453c6d3bbba693be78cdf3f +Author: Richal Verma +Date: Sat Oct 30 20:56:03 2021 +1000 + + Add Gated PixelCNN model for generating VQVAE latent space + +commit c06a3045310b15759633880086f08ce2769a5039 +Author: des-gan09 +Date: Sat Oct 30 20:51:42 2021 +1000 + + add changes to improved unet + +commit 63b07dfd9373aa72903dad28f95cd0ba66fcd873 +Merge: d4ef4fff 5abb5e98 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 20:47:20 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/ShangGao-forever/PatternFlow into topic-recognition + +commit d4ef4fffab708ee3088e02d01a94b3e35251b91b +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 20:47:16 2021 +1000 + + Create train_stylegan.ipynb + +commit f2cb54036ceae96adc5435c22c3ce2fe14138438 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 20:47:13 2021 +1000 + + Update Models.ipynb + +commit 980da7fdb72b9eb920e3c98a77ae2f6aa4be6156 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 20:47:10 2021 +1000 + + Create Dataset.py + +commit 88e10919eefcd1ab898192e7544b72e24da16b8f +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 20:45:52 2021 +1000 + + Delete Dataset.ipynb + +commit f1fa4a986a6a54c5c4827a53743a6f595f82c858 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 20:39:41 2021 +1000 + + Add files via upload + +commit 5abb5e98f0b6e62768bd189bc4e2cf90746deb5b +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 20:39:41 2021 +1000 + + Update README.md + +commit 6cb3bf99b37de5d0ad62234889b4e38c7c126d60 +Author: Chao-Chun Wu <52982031+white-segfault@users.noreply.github.com> +Date: Sat Oct 30 18:34:06 2021 +0800 + + Implemented the fourier encoding part of the architecture + +commit 9c08561dd81fef1c1f4c60f8d3c4fa608af8b72a +Author: Tony +Date: Sat Oct 30 20:27:28 2021 +1000 + + Add unet diargam to readme.md + +commit 9994eb1bab931e3b1d08877128220c266fc95f85 +Author: Djamahl +Date: Sat Oct 30 20:13:31 2021 +1000 + + implemented Perceiver based on ViT for latent transformer and keras example Perceiver + +commit baad26b37e71005d3bd320883959be3ee99d5b10 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 20:12:42 2021 +1000 + + Update Models.ipynb + +commit 55070f3c57cf40989f8156babb5c97595e8362b6 +Author: s4581614 +Date: Sat Oct 30 19:54:28 2021 +1000 + + Refactor code from notebook to driver and model python files + +commit b22e66174c6426c7a7bdebc6e2c299ebec864c8d +Author: JoeHolownia +Date: Sat Oct 30 19:39:52 2021 +1000 + + Refactored project structure to match requirements, experimented with different optimizers + +commit 66503e7c7cc16a9bd14e330b3e3b110a58e6e8b0 +Author: SteveInUQ +Date: Sat Oct 30 17:32:08 2021 +0800 + + Review and add some comments + +commit 2897ea375d80fcb260a697b5aedc9f5c485a5774 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Sat Oct 30 19:30:02 2021 +1000 + + Build unet model using tensorflow + +commit 509da754353d2e6df74b2c90fb08428a29d7d358 +Author: Andrew +Date: Sat Oct 30 19:18:38 2021 +1000 + + improved unet model completed + +commit e4b2a1a965fca1adf28f7ac446a592fa16e3e129 +Author: Korbin Daly +Date: Sat Oct 30 19:16:15 2021 +1000 + + changed grayscale into colour implementation now get ~0.76 dice score with 50 epochs. + +commit 4a88e2bca5336ba55494a9a2526f3eaf67ad1a81 +Author: Keith Dao +Date: Sat Oct 30 19:08:04 2021 +1000 + + Added note about filepaths. + +commit a0da66ca6cbb8677aae12d020865ecbf9152dc19 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Sat Oct 30 19:04:30 2021 +1000 + + Project setup + +commit 1e95721774bd227c43df9ba92fa5e2039b84043c +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Sat Oct 30 19:02:40 2021 +1000 + + 1st draft report, Source code is still pending + +commit d1864f89e800bafa8c179da0679111913879f200 +Author: Chao-Chun Wu <52982031+white-segfault@users.noreply.github.com> +Date: Sat Oct 30 16:58:33 2021 +0800 + + Added ReadME file which explains the perceiver transformer architecture, also improved comment for pre-processing of data + +commit 1c4622b0876c8b42aabe9d5f0a8ffe2d21e47ac7 +Author: Keith Dao +Date: Sat Oct 30 18:55:05 2021 +1000 + + Added author. + +commit e8fce235443142e79108db0b0889f05fdaf69fc3 +Author: ByronDowney +Date: Sat Oct 30 08:54:58 2021 +0000 + + Changed padding approach after realising the ISIC images are not all the same size. Currently google colab is crashing when trying to run even a very small model, so I plan to test it on a lab computer. + +commit c8f74d740ba4b2427e9747fb54040635f9a75c10 +Author: Keith Dao +Date: Sat Oct 30 18:51:31 2021 +1000 + + Removed unused file. + +commit c27da6d755d92acb9613f433c67664756e02325e +Author: zaragolshani +Date: Sat Oct 30 19:50:54 2021 +1100 + + update the script to adjust the bounding box coordinates after padding and scaling images + +commit 360a421512c893529f3d6d138b47d7ad5d8c64b9 +Author: Keith Dao +Date: Sat Oct 30 18:50:34 2021 +1000 + + Fixed grammatical errors. + +commit 799feee69d70c1e989c136666c431182105673b7 +Author: Paris Qian <1759658+qiansen1386@users.noreply.github.com> +Date: Sat Oct 30 18:49:31 2021 +1000 + + create report + +commit 9140e5a4a6ed6084212219c90c5f1deb25a62ae0 +Author: Tompnyx +Date: Sat Oct 30 18:46:21 2021 +1000 + + Cleaned up code and commented all functions. Added functionality of adding directory and moving the generated model.png file to the Results folder. Fixed miscellaneous bugs and errors. Added author's signature. + +commit 5777c459363b319cd0c1ca4712527696cc6e0d20 +Author: Andrew +Date: Sat Oct 30 18:39:44 2021 +1000 + + methods created for modules of the improved unet + +commit 674612ed8bb16164d66db95299409ede8e9d1abe +Author: cristina1096 +Date: Sat Oct 30 08:38:52 2021 +0000 + + create config.py and train.py, add dataloader function in train.py + +commit c0990d304458ea528f3738b02e301aa57c3d482e +Author: Keith Dao +Date: Sat Oct 30 18:37:48 2021 +1000 + + Resized gif. + +commit 8a986e95428a5ec9cdee5d6742c48afbb480f129 +Author: Keith Dao +Date: Sat Oct 30 18:37:05 2021 +1000 + + Added gif. + +commit bf4398f956df4db5a0bf0529a9f2ce690ee273cf +Author: Keith Dao +Date: Sat Oct 30 18:28:54 2021 +1000 + + Fixed gif link. + +commit 9d6b6b69e9f32f4340a73bdf31c3bbf78fe0ffa8 +Merge: 8fc6385d c18f7134 +Author: Keith Dao +Date: Sat Oct 30 18:26:46 2021 +1000 + + Merge branch 'topic-recognition' of github.com:Keith-Dao/PatternFlow into topic-recognition + +commit 8fc6385d5fd4fd7fab03f4076ccb8a0ae73d281f +Merge: 4e7b2486 4397481c +Author: Keith Dao +Date: Sat Oct 30 18:19:46 2021 +1000 + + Merge branch 'topic-recognition' of github.com:Keith-Dao/PatternFlow into topic-recognition + +commit c18f71345c9900ad3f3266fcb21845edb2436b1b +Merge: 4e7b2486 4397481c +Author: Keith Dao +Date: Sat Oct 30 18:19:46 2021 +1000 + + Merge branch 'topic-recognition' of github.com:Keith-Dao/PatternFlow into topic-recognition + +commit 4e7b248632bd0e06d49d2ba44479cfbdfa622ecf +Merge: 0b802133 1d2d8ffe +Author: Keith Dao +Date: Sat Oct 30 18:15:43 2021 +1000 + + Merge branch 'topic-recognition' of github.com:Keith-Dao/PatternFlow into topic-recognition + +commit 10c48efeaf077d79216033c4ab07c9462f5ea58f +Author: borova-siska +Date: Sat Oct 30 18:18:58 2021 +1000 + + cleaned code + + Moved some variables around and added comments to make the code a bit more readable. + +commit 4397481cb710eeee71fd8d17ef1504964e05448e +Merge: 0b802133 1d2d8ffe +Author: Keith Dao +Date: Sat Oct 30 18:15:43 2021 +1000 + + Merge branch 'topic-recognition' of github.com:Keith-Dao/PatternFlow into topic-recognition + +commit 513f7275c169b7e6d792ec0a3cf3f1ab34271fcd +Author: borova-siska +Date: Sat Oct 30 18:16:48 2021 +1000 + + added test/train/val split + + To avoid data leakage, had to write a regex function to group the cases together and split the dataset based on that. + +commit be919a7d75d1937a53af44c1aebd512c4a2dd380 +Author: Mallika <55978813+mallika-x@users.noreply.github.com> +Date: Sat Oct 30 18:15:58 2021 +1000 + + Added loss and accuracy plots, and mean SSIM calculation. + +commit 0b80213325940f0452c4a1bb118b0c25f69f5870 +Author: Keith Dao +Date: Sat Oct 30 18:10:16 2021 +1000 + + Fixing styling issues on GitHub. + +commit a7bee5a912aa6e330e7bee179578891be6c03423 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sat Oct 30 16:14:23 2021 +0800 + + configuration files of yolo + +commit 6af5ab4a6f2755f682af94b643daa012f8a02bc2 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 18:12:03 2021 +1000 + + Update Models.ipynb + +commit 1d2d8ffe7dc050289b52d7d45121430e5e6b5fee +Author: Keith Dao +Date: Sat Oct 30 18:10:16 2021 +1000 + + Fixing styling issues on GitHub. + +commit 6c9efe35d9c9e02a01badf58251dc63622e105cb +Author: Andrew +Date: Sat Oct 30 18:08:52 2021 +1000 + + placeholder methods created for various elements of the improved unet + +commit 45d64ec8f79b6053b7e5833c491c50d5440017e2 +Author: borova-siska +Date: Sat Oct 30 18:08:05 2021 +1000 + + expanded data to full dataset + + Removed patchify functions, wrote a Dataset map function to get the image/label from a path. + +commit 02dc93196f2cf2dd4b835848a8249a28322504ba +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sat Oct 30 16:07:21 2021 +0800 + + result_batchsize=4000 + +commit 3b5eabc59bce000f0d7ede698dcffd097c22c658 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sat Oct 30 16:06:46 2021 +0800 + + RESULT__batchsize=3000 + +commit 3fc0f410857d49a04f47df535962577fe7c7227e +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sat Oct 30 16:05:48 2021 +0800 + + Delete result.txt + +commit 5075360071fccba96c727dd303be015feb834bab +Author: JoeHolownia +Date: Sat Oct 30 18:03:23 2021 +1000 + + Refactored folder, last commit before significant refactor into required format. + +commit fdb3c8ee5cd6949b4ce134b031d825e3fd65619b +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 18:00:24 2021 +1000 + + Create Models.ipynb + +commit 60083d47ae4a9870bc2aa97c49a9ecb66e8e109e +Author: borova-siska +Date: Sat Oct 30 17:58:07 2021 +1000 + + testing training on one image and validating on another + + Commented code to be uncommented later. + +commit 02aff6dca682194890b5738f993538f3502946f8 +Author: borova-siska +Date: Sat Oct 30 17:55:40 2021 +1000 + + fixed a validation issue + +commit 1aadbcb066800f1fe594365ea5b34f39499f22e4 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 17:51:47 2021 +1000 + + Create Dataset.ipynb + +commit 0850fe37510415f199f9e27c25e844adf08d83c4 +Author: Keith Dao +Date: Sat Oct 30 17:51:23 2021 +1000 + + Reverting back to uniform noise. + +commit 0faba8c6e29ee681cd500bcf2dc49de2a330293e +Author: Keith Dao +Date: Sat Oct 30 17:51:01 2021 +1000 + + Setup final hyperparameters. + +commit ec250aa775e1792af5a71e788b0bf4dc1d19b38b +Author: Keith Dao +Date: Fri Oct 29 22:48:45 2021 +1000 + + Altered learning rate. + +commit 06ffc9de4979de81372132704f54ab7e301530ca +Author: Tony +Date: Sat Oct 30 17:41:06 2021 +1000 + + Updates + +commit 017c95ee39bc1690de3f9a8966e2339ac3765e37 +Author: MujiDipto +Date: Sat Oct 30 17:39:24 2021 +1000 + + fixed styling of model.py + +commit 442ec78729a62094d829635aa12fe0052096cfa0 +Author: MujiDipto +Date: Sat Oct 30 17:36:47 2021 +1000 + + added missing "padding" parameter in the output layer of the model + + there was a mismatch of the shapes due to the missing padding='same' parameter + +commit 71c32805ef4c458140392a4582f6312badbda601 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 17:36:23 2021 +1000 + + Update README.md + +commit b7997a19b8dd90e00529aa0157fb22a90843193a +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 17:34:00 2021 +1000 + + Update README.md + +commit 3d2ae27efc419566f633fc2fb7799108452eb2d2 +Author: borova-siska +Date: Sat Oct 30 17:30:29 2021 +1000 + + added example test slice plot + +commit f3c292895895ea2e70a8093807f2acaa96e88063 +Author: Joshua +Date: Sat Oct 30 17:28:58 2021 +1000 + + Added Model Training step + +commit 97da476a7dffc406a522142e28bd9dc479ca2f98 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Sat Oct 30 17:28:25 2021 +1000 + + Add files via upload + +commit 34fc564c262fe0130d663bf57fff35c9a9b31964 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Sat Oct 30 17:27:22 2021 +1000 + + Add files via upload + +commit f7753f81254e81d4646e673de39a200591f23bce +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sat Oct 30 17:26:49 2021 +1000 + + Add files via upload + + first version of result, not very good, need to change the cfg file + +commit bfd6789f187725904b25117c345cf711d36e328f +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 17:23:37 2021 +1000 + + Update README.md + +commit f4ad4f3a3c2c2cdd6a8e5702d8097c68c07a51ea +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 17:21:28 2021 +1000 + + Update README.md + +commit e7a6440565eb37d4a57fb6f942e731c40b3b3395 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 17:20:21 2021 +1000 + + Add files via upload + +commit e3a6501d20329fc9fac3eb281478fff3f18809e8 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 17:16:47 2021 +1000 + + Update README.md + +commit 761411a5a8d4c3c27436d62f23a0c0230c646f33 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sat Oct 30 15:16:17 2021 +0800 + + test file and result + + the result and test file + +commit 566d7c282d2fc64490219a38d07c6cf7379591cf +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 17:15:44 2021 +1000 + + Add files via upload + +commit 6ecf3675520502b3e9279eb8cd1f915bec56522a +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 17:14:29 2021 +1000 + + Add files via upload + +commit 4abd9eac0933a63f02e9f3d10b636db0d5e83257 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 17:14:01 2021 +1000 + + Delete Model Structure.png + +commit 46fcc196c70e53c253dc229421bb08c6ca1583b8 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 17:13:03 2021 +1000 + + Add files via upload + +commit e1d6db7bbffafa66fd1f67ae4ccb8d978d8111ff +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 17:12:34 2021 +1000 + + Delete Model Structure.png + +commit b18fe13e26dbb37dbb79d0acad42b145a4e4e446 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 17:11:39 2021 +1000 + + Add files via upload + +commit 67da2b641cad7c9d0847770a53303a2885d6872f +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 17:11:22 2021 +1000 + + Delete Model Structure.png + + Change on image + +commit df24814fbfa442ebadf5eca1c0fb3595d64e7e37 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 17:09:20 2021 +1000 + + Add files via upload + +commit 6c45a4a85d67ced401f2b04f7666d64c65004f04 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sat Oct 30 15:03:52 2021 +0800 + + test file + + test file and get the result + +commit 554b613ac66d7203880d9365ecd45b7ee2925d96 +Author: Rick W +Date: Sat Oct 30 16:59:34 2021 +1000 + + remove additional batchnorm and extra functions to increase speed + +commit 79fb898d59311289ab173fe7d0ca072bd362342f +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 16:57:27 2021 +1000 + + Delete recognition/SG directory + +commit 3410f1e0f384ea5819d0873c9e2510c41a04d617 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 16:54:16 2021 +1000 + + Create README.md + +commit 109846cf16eb24f058cb695683333c161f6705c4 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 16:50:48 2021 +1000 + + Update README.md + +commit 82b6e7874c83c585d54d75b77e344162ba39b3c3 +Author: des-gan09 +Date: Sat Oct 30 16:50:45 2021 +1000 + + Reverting to previous commit + +commit 2117f8e9768fa03b50a1558171e61b92e354b4df +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 16:48:13 2021 +1000 + + Update README.md + +commit 47a84614d5c88e2d87c55cd2b1ddb6b77d9a70b8 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 16:47:25 2021 +1000 + + Add files via upload + +commit d6fbbc6634c9643d5310438de71426878f91ba4b +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 16:47:10 2021 +1000 + + Delete Model Structure.png + +commit 43b86e1572ae1e980c3b390d640a9886db25ead4 +Author: MujiDipto +Date: Sat Oct 30 16:41:29 2021 +1000 + + added missing "channels" parameter for decode_png in process_data.py that was giving NoneType error + +commit ea6fdbcbddc52fcf2753d1fdb8a4918b7f2f0e7a +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 16:38:57 2021 +1000 + + Add files via upload + +commit 3def6609c5a94ace290970da92349141c98894ea +Author: MMMMMYY +Date: Sat Oct 30 16:35:44 2021 +1000 + + Update readme.md + +commit 02484175e5e7109ed74b0ab3a4a09db3c14a0d1e +Author: ByronDowney +Date: Sat Oct 30 06:27:27 2021 +0000 + + Finished creating the Improved Unet model. Not yet tested though. + +commit 81ca4cd9bd5c4e73d9749d13d17cf53976711130 +Author: borova-siska +Date: Sat Oct 30 16:27:07 2021 +1000 + + added plotfigs + + Fixed metrics, added some plt code to generate some loss and dice graphs. + +commit 3acb711dfab9085f2cb7b63324eb0f45474cff85 +Author: davidphun +Date: Sat Oct 30 13:25:29 2021 +0700 + + Update README.md + +commit 12338b0ea82df73a95fecbb36d1b2cccacadd164 +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Sat Oct 30 16:23:40 2021 +1000 + + SUccessfully training and evaluating data with a train/test data split. + +commit b44739882bfc882f6c314029e1f0892ca1a10651 +Author: David Phun +Date: Sat Oct 30 13:22:25 2021 +0700 + + Finalize README.md + +commit 94e009beb2bdb86db47184697eb82a16a476f89c +Author: Andrew Luong +Date: Sat Oct 30 16:18:25 2021 +1000 + + Added driver.py file from original notebook. Removed notebook from Git + repo + +commit d7160376647e90741e662e02cca5ffcfae65c8b7 +Author: leecwj <37468566+leecwj@users.noreply.github.com> +Date: Sat Oct 30 16:09:54 2021 +1000 + + report added (explaining problem, model, dependencies) + +commit 3f022a598c807ba702f2c217c8f38073c527cdd2 +Author: Your Name +Date: Sat Oct 30 16:09:44 2021 +1000 + + Add some comments in main.py. + +commit 3581a896bec768be0570da883467a232302fefa7 +Author: Andrew Luong +Date: Sat Oct 30 16:07:56 2021 +1000 + + Extracted UNET Model from Jupyter Notebook into Model.py File + +commit 4f3bc476feac08f87a7f67b767f0a43a6fa45d4e +Author: Your Name +Date: Sat Oct 30 16:04:42 2021 +1000 + + Implement README.MD file. + +commit d00ba74753474f7d1f50182d0c6191fcbf001620 +Author: borova-siska +Date: Sat Oct 30 16:03:45 2021 +1000 + + created barebones train.py + + Created a script that will load the first image and its labels and segment other parts of itself by using small patches of the image. + +commit 50c49b6014c8d6de30398947185f3a144abe84cd +Author: Your Name +Date: Sat Oct 30 16:03:44 2021 +1000 + + Add some images to write readme file. + +commit 4901dc8d3b75038d23922dbadd78a8ef443d30a4 +Author: Anthony North +Date: Sat Oct 30 16:00:27 2021 +1000 + + fix truncated bibtex attribute + +commit e0e07921a19bf792b0b739082a9b8e5b7481d4a5 +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Sat Oct 30 15:59:32 2021 +1000 + + Final commit - updated Figure number error for training loss graphs in README.MD + +commit 90554192bdc6dfd1cebaf3c5acf49f8649e8f631 +Author: Anthony North +Date: Sat Oct 30 15:58:02 2021 +1000 + + add citations + +commit 183598c15c3d5213a6badc9f0a59e0c5505a97f9 +Author: Michelle Menesch +Date: Sat Oct 30 15:55:48 2021 +1000 + + Initial commit of README.md and model.py files + +commit 7ad62dc86431d39b25a9ed698393e16857ee5884 +Author: Shang Gao <69186527+ShangGao-forever@users.noreply.github.com> +Date: Sat Oct 30 15:52:09 2021 +1000 + + Create Test_file + +commit 80b24ae5af50242edf960c169e0debd0c0ae2c9b +Author: Michelle Menesch +Date: Sat Oct 30 15:49:35 2021 +1000 + + Initial commit + +commit 0437379f07787dd1ab05f50f7475218ed17763c9 +Author: d7a7 +Date: Sat Oct 30 15:44:55 2021 +1000 + + Created Improved Unet model. + + The model.ipynb file now contains what should be an Improved UNet model + based on the paper stipulated in the task sheet. While it still contains + the original UNet I created as a test and to get experience with UNet's + that will be removed once the Improved UNet is shwown to be working. + + The current format contains all functions needed to run the function + that creates the UNet. + + The next step is again try to get the keras plot_model() working on + windows. + +commit 5184b9cdef153dee8a3f59c28b610d43a07ceeb0 +Author: Vy Hoa Phun +Date: Sat Oct 30 15:42:08 2021 +1000 + + Add image resource for README + +commit f1c8752689c4506b6657b6579e5ebcfcfb4adf72 +Author: Vy Hoa Phun +Date: Sat Oct 30 15:41:17 2021 +1000 + + Finalize the driver scripts + +commit 46055833e0d3c226b41cafb43d3c2803bb5cdef6 +Author: Vy Hoa Phun +Date: Sat Oct 30 15:38:59 2021 +1000 + + Put more comments on model.py + +commit 8de346947afe228328f446558d7b14e75bb564f4 +Author: MujiDipto +Date: Sat Oct 30 15:38:19 2021 +1000 + + created model on driver script, model compiles but getting error on fit. Mismatch of shapes + +commit 963caffe1a59654e9ac372dfde40ca366c513868 +Author: Nifu +Date: Sat Oct 30 15:25:50 2021 +1000 + + Add troubleshoot for README + +commit facbc2394984402e8a747332f242b0f6847992da +Author: MujiDipto +Date: Sat Oct 30 15:17:11 2021 +1000 + + remove unused imports from process_data.py + +commit f3ddb8fd89d3bb7a8c41238464dd9f1dcf32c8b2 +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Sat Oct 30 15:16:55 2021 +1000 + + added some more comments to models.py and functions.py + +commit b949165751a7cd918216965b805314f744defb51 +Author: MujiDipto +Date: Sat Oct 30 15:15:29 2021 +1000 + + remove unused imports from model.py + +commit 167d922ac0c041a23dc9ca9c3af8ae359c654ecc +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 15:15:18 2021 +1000 + + Update README.md + +commit 6563dfc92cfb7cf28caefb300448d392e35a2b5e +Author: Anthony North +Date: Sat Oct 30 15:12:25 2021 +1000 + + add model diagrams + +commit 0684dfcac61de0f0554afe67121fb496f3d9f0d6 +Author: s4581614 +Date: Sat Oct 30 15:10:09 2021 +1000 + + Refactored data splitting methods to incorporate patient IDs + +commit cf6ef4e3f459fa37098c381efcec4b4722a0a903 +Author: LABS\s4539629 +Date: Sat Oct 30 13:11:42 2021 +1000 + + Major updates (see below) + + Model: + - Tidy up F1 score function + - Added Custom Callback placeholder in model outer class + - Made num_classes and model feature map scale both init parameters when creating the outer class + - Made model nodes accessible outside creation function + - Removed hardcoded class nums in multiple places and repointed to init parameter (e.g. last model Conv layer) + - Implemented Model saving function + - Added docstrings + + Driver: + - Added deterministic randomization for data split function to ensure subsequent testing does not overlap with data used for training originally + - Functionized training datum pre-prep (e.g. standardization) as these are reused during model evaluation (predict) tasks as well + - Added new function for evaluating a model. Used during training (against val data) and subsequently during the testing phase (against test data) + - Tidy up of training loop. Now calls evaluation function (above) every x epochs (x set by user) + - Added function to load a saved model and test it against the test dataset (evaluate F1 score). Optionally saves the predictions to file for 3D image browsing. + - Added docstrings + +commit ed4cc49dba539b58911f53f85ced5a7174f06d9a +Author: Ahmed +Date: Sat Oct 30 14:58:43 2021 +1000 + + fourier working properly; need to fix class and data importing + +commit 1be6d608d0a300b2fe3455be63116b33e934738b +Author: tomdx +Date: Sat Oct 30 14:55:07 2021 +1000 + + Fix incorrect structured similarity calculation + Remove the erroneous normalisation + +commit 61def5a442b8599e5589174520f960d255a45a31 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sat Oct 30 12:52:20 2021 +0800 + + Update README.md + +commit 43b54cba5f854417308f97ea080bbecc9793da90 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sat Oct 30 12:45:12 2021 +0800 + + Update README.md + +commit 5348d87dda0bd5e6b0b026b5b02bbffa9ea927d6 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Sat Oct 30 14:32:26 2021 +1000 + + Update README.md + +commit dfe323aba350161a262820ace60301f520ff2c5c +Merge: 449956b5 640e24a3 +Author: NhatHuyNguyen +Date: Sat Oct 30 11:08:29 2021 +0700 + + Merge branch 'topic-recognition' of https://github.com/NhatHuyNguyen/PatternFlow into topic-recognition + +commit 449956b5c559fa9411fad4d0ae68b80eeec2d0cc +Author: NhatHuyNguyen +Date: Sat Oct 30 11:07:43 2021 +0700 + + add training time + +commit 3127564acbda3945ff21b9473594acf15b16450b +Merge: f40bee41 55ea4c83 +Author: Mark Coulon +Date: Sat Oct 30 14:07:16 2021 +1000 + + Merge remote-tracking branch 'origin/master' into master + +commit f40bee41f8c30916d008bdaf80c9dfccec987843 +Author: Mark Coulon +Date: Sat Oct 30 14:06:45 2021 +1000 + + Changed the image path. + +commit 640e24a30e3576640b9a8d9aa3b6a3b030309ec1 +Author: NhatHuyNguyen +Date: Sat Oct 30 14:06:09 2021 +1000 + + reformat transformer code + +commit 55ea4c832d85b66aaefd5ce7adcb74e8b3403e1d +Author: MarkCoulon <88473455+MarkCoulon@users.noreply.github.com> +Date: Sat Oct 30 14:05:33 2021 +1000 + + Update README.md + +commit b478759104d36bcaf080baa96bcfa464f53c8a1e +Author: MarkCoulon <88473455+MarkCoulon@users.noreply.github.com> +Date: Sat Oct 30 14:05:14 2021 +1000 + + Create README.md + +commit d10698d904663273d97a80964c73d03e20f6458e +Author: Nifu +Date: Sat Oct 30 14:04:23 2021 +1000 + + Show main script steps in the terminal + +commit 94cfa94df77c8f6ccccb65f44e8095c433434470 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sat Oct 30 11:57:25 2021 +0800 + + config of yolov3 + + the training config file + +commit fbbcf9f7a37e6c8457daab8c5228ce2b53262798 +Author: Your Name +Date: Sat Oct 30 13:50:34 2021 +1000 + + Implement a function to comput dice loss. + +commit ac33be0c8a67192faf14c16acc2bbb898d461cb9 +Author: Joshua Knowles +Date: Sat Oct 30 13:39:39 2021 +1000 + + Final implementation of model with 5 epochs, results poor + +commit 95e2b7b0da8c4840e18576b7e4d3195e81b20a65 +Author: StopTheBoolean +Date: Sat Oct 30 13:31:48 2021 +1000 + + Small readme improvements + +commit 9d6712228d5c7787430753dff7036ae1cc3746ff +Author: NhatHuyNguyen +Date: Sat Oct 30 10:25:41 2021 +0700 + + add images preprocessing step + +commit 4c54cece80879cdf76b6cfc3c97a6f19087740ff +Author: StopTheBoolean +Date: Sat Oct 30 13:23:17 2021 +1000 + + Add images to readme + +commit 6435605d574ab8eba89e6a87fd1c47b63448c22f +Author: Mark Coulon +Date: Sat Oct 30 13:22:00 2021 +1000 + + Fixed up a few minor problems, added batch normalisation and finished everything. + +commit 11221470c64ed5dc48e4929829e8b36314e2f2e9 +Author: MujiDipto +Date: Sat Oct 30 13:11:47 2021 +1000 + + model now compiles successfully + + Added more inline comments + +commit a525c3075eed3e6e5b5cc9efd9590982c13d2913 +Author: StopTheBoolean +Date: Sat Oct 30 13:06:40 2021 +1000 + + Add readme and fix plotting bug + +commit 53366ba6da777980968b7f7decea8074816c34a9 +Author: Nifu +Date: Sat Oct 30 12:53:03 2021 +1000 + + Update instructions for install requirements + +commit 21e353fa59305c506396ae7e3dc4fb09abd298c6 +Author: Joshua +Date: Sat Oct 30 12:51:29 2021 +1000 + + Added function to get model, plot graphs of training results + +commit 39c0d5f8d3bde2db99d3acb3276086bc76fd840d +Author: MujiDipto +Date: Sat Oct 30 12:50:47 2021 +1000 + + fixed typo in code, added missing positional argument in localization_module() + +commit ad87a3e71c5b21d7a5c3686b498c6f5c70575134 +Author: MujiDipto +Date: Sat Oct 30 12:48:42 2021 +1000 + + Fixed incorrect kernel size in upsampling_module() + +commit 36c10f51a94e41fb26983bc8f72873eeee880d2c +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 12:21:11 2021 +1000 + + Update README.md + +commit 8409a4c67ed391365391a106c708f2edc5602e00 +Author: Nifu +Date: Sat Oct 30 12:07:50 2021 +1000 + + Documentation for plot functions + +commit 25411e6dbdca160e1df19ec584b188e9ee0d0572 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 12:04:38 2021 +1000 + + Update README.md + +commit 9cc2332e931242b3679430a5f2e6a1c52b69554f +Author: SteveInUQ +Date: Sat Oct 30 09:55:01 2021 +0800 + + Add comment and parameter PATH as data path for DataPreprocessing class + +commit 7fbf3613f94d3fd2e479d0f5035c40e30666a62a +Author: leecwj <37468566+leecwj@users.noreply.github.com> +Date: Sat Oct 30 11:48:48 2021 +1000 + + adding comments and removing old u-net model + +commit ee1b88bccfd4ab68f3892977edc0b6f821905ac3 +Author: StopTheBoolean +Date: Sat Oct 30 11:25:33 2021 +1000 + + Implement code to plot history of training loss + +commit 97d765c87f9f844ba5b4c44b50b7a6bc1faab7f5 +Author: Nifu +Date: Sat Oct 30 11:20:25 2021 +1000 + + Write documentation for UNet model + +commit 2b04dca988b6245077e4525fc4ff897adda9c828 +Author: zaragolshani +Date: Sat Oct 30 12:13:59 2021 +1100 + + create train script to train darknet on ISIS dataset + +commit 7de9ddcccdb1b2cba31dc28ea575d3a977466039 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 11:10:47 2021 +1000 + + Update README.md + +commit bde1ee91a0d601c4b8d43618143439b27fb71a7e +Author: ByronDowney +Date: Sat Oct 30 01:06:16 2021 +0000 + + Now normalises the dataset. The previous commit sounds a bit strange because there was a commit before it that failed without me realising. + +commit 4ac0e9dcda58c2fa27d47b3f35c63e8be0693d15 +Author: StopTheBoolean +Date: Sat Oct 30 10:59:37 2021 +1000 + + Implement compile and fit method to simplify driver code + +commit af570cbf540c024cbcf3e9e504335c4857b2963a +Author: Nifu +Date: Sat Oct 30 10:56:43 2021 +1000 + + Add docstrings to metrics + +commit 1c7bc4df5daaf87b95d7fb3252e12912b97ec8f6 +Author: Mallika <55978813+mallika-x@users.noreply.github.com> +Date: Sat Oct 30 10:50:47 2021 +1000 + + Renamed vqvae_model.py to VQVAE.py + +commit 2e1054d45da581461ebc5b13163d326fc729cf72 +Author: Mallika <55978813+mallika-x@users.noreply.github.com> +Date: Sat Oct 30 10:46:10 2021 +1000 + + Added generation of novel images. + +commit 78e2b935767598e4c03963b3fa0220488a7d11a7 +Author: StopTheBoolean +Date: Sat Oct 30 10:45:02 2021 +1000 + + Fix bugs in perceiver code and implement initial example in driver code + +commit 9ba1b5663581cf19c715dd1f5e69344a174a5452 +Author: ByronDowney +Date: Sat Oct 30 00:23:27 2021 +0000 + + Added parameters to specify train/validation/test split. Changed approach to loading data, now loads directly into tensorflow datasets. Also outputs proper usage when called without enough arguments, or a train/validation/test split that does not add up to 1. + +commit 6c12ae9a24244be6685167aa4edc681f2e46a054 +Author: Nifu +Date: Sat Oct 30 10:14:16 2021 +1000 + + Documentation for data preprocessing + +commit 2afb0b785d0c0c28f714670540e5a8659b06c61f +Author: StopTheBoolean +Date: Sat Oct 30 09:57:55 2021 +1000 + + Implement model build and call methods + +commit d2d2135c2e2f7d77d8e582500451661e0d6ff732 +Author: Joshua +Date: Sat Oct 30 09:41:39 2021 +1000 + + Added functions to calculate dice score + +commit ffad4e701f303b069689e053e97b52555a5041f8 +Author: Edward_Guilfoyle +Date: Sat Oct 30 09:39:35 2021 +1000 + + Updated readme to include required packages + +commit 8bb867dceb19e4075c0305590ecb24b68e9ca179 +Author: Edward_Guilfoyle +Date: Sat Oct 30 09:25:56 2021 +1000 + + Final update before pull + +commit c3b790f7c698d5a685ea74b95cac6faaf7d27a86 +Author: Tony +Date: Sat Oct 30 07:19:28 2021 +1000 + + DSC scores exceed target on 50 epochs. + +commit 8be244c9cfce810f815a6b742991eb685db0e947 +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Sat Oct 30 07:04:10 2021 +1000 + + Removed empty tester jupyter notebook and fixed bugs so that the test_vqvae_oasis python file executes as desired in cmd prompt. + +commit 67c9694c88a86412aece5024fbb420fd533ed021 +Author: cristina1096 +Date: Fri Oct 29 19:08:02 2021 +0000 + + Add Discriminator block, mini batch std, Discriminator + +commit 4ea8ce6c77496feaa2acdd35e7004cdaa55beafe +Author: Chegne Eu Joe +Date: Sat Oct 30 03:02:04 2021 +0800 + + Implemented self/cross attention layers + +commit ba6dfefcc69974b6e6ed0e41f2b677f8ee3e4c91 +Author: MujiDipto +Date: Sat Oct 30 03:12:03 2021 +1000 + + complete create_model() in model.py but contains bugs + +commit 11dd6dfd6ec50bb49902a11eaab21ef81010cd13 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sat Oct 30 01:02:18 2021 +0800 + + Delete yolov3.ipynb + +commit 81a5399768535d7e15edda1b0bf1b899cdce8850 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Sat Oct 30 01:01:54 2021 +0800 + + ver2 + + after adjusting the mistakes of labelling. + +commit 0256dcd47439a6f3ad7a843f458f7a00dc65fd23 +Author: Joshua +Date: Sat Oct 30 02:44:19 2021 +1000 + + Added map function to change channels of output to 2 + +commit 50f76add8a922d67a13c615e56c9daaa73a3dc17 +Author: MujiDipto +Date: Sat Oct 30 02:04:00 2021 +1000 + + fixed concat of wrong layers (changed add_layer 5 to 3) + +commit 3cee3b602f55f1253ccd0a562c59b9e3be279f3c +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Sat Oct 30 01:47:48 2021 +1000 + + Made model smaller and fixed problem with mask + +commit 568ddec503752781d4384fef399d7b2973ec4468 +Author: MujiDipto +Date: Sat Oct 30 01:39:54 2021 +1000 + + create segmentation_layer function in model.py + +commit e8408e8af1a521f7c0829498b0ee9f8a2a89c97d +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Sat Oct 30 01:13:10 2021 +1000 + + Wrote most of PixelCNN based on paper, doesn't work too well + +commit 0a34e6cc964ed14b1c5956de357561a778984ac9 +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sat Oct 30 01:11:51 2021 +1000 + + Delete yolov3_custom2.cfg + +commit 23289c1321f2dd3eb04efa3e44d6d9605a6905cf +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sat Oct 30 01:10:32 2021 +1000 + + Add files via upload + + the first version of yolov3 parameters + +commit b5e405b441c21ad828d6ea86044440b5cfad8062 +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sat Oct 30 01:09:25 2021 +1000 + + Add files via upload + + the first version of yolo_v3 parameters + +commit ec8d4dce6e97d9f61b515d4a4cc08cfd07565315 +Author: Korbin Daly +Date: Sat Oct 30 01:05:06 2021 +1000 + + Added average dice calculation for predictions (1 class only) scoring only ~0.72 + +commit cde55344321d24771f2a819d757875bef79f3d70 +Author: Mallika <55978813+mallika-x@users.noreply.github.com> +Date: Sat Oct 30 00:55:23 2021 +1000 + + Added generation of priors. + +commit d544e555de8e9dbb54ddca3cc47cfa47226aa70d +Author: Nifu +Date: Sat Oct 30 00:47:04 2021 +1000 + + Update installing instructions + +commit 4f3349502d878c4cf298567d177aa58679939d82 +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Sat Oct 30 00:46:00 2021 +1000 + + Add files via upload + + use ground truth to label the dataset + +commit 1bcd11dee898e09001f5e8a3837cd2d81bed5a38 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 00:24:10 2021 +1000 + + Update README.md + +commit 0cc56d6202517f82467310cd319791a7fdd2bbf5 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 00:23:35 2021 +1000 + + Update README.md + +commit 334b183084d7a6b1176d20c23cd2c030bc1dc364 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 00:23:10 2021 +1000 + + Update README.md + +commit f5159dabba00cc1ff83bee6dd9eb8ba5a2a79dd7 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Sat Oct 30 00:21:48 2021 +1000 + + Update README.md + +commit edb7325015a2063dea25f68b58035f3cdff4f15b +Author: 周脆脆 +Date: Sat Oct 30 00:10:17 2021 +1000 + + fix some bugs in train function in s4571084-gcn.py + +commit f7d5dc71fa00b104145bb4139ae1388423b685d7 +Author: Tompnyx +Date: Sat Oct 30 00:09:44 2021 +1000 + + Found issue with data preprocessing where the mask images were being normalised like they had colour channels. Implemented Instance Normalisation (Currently in Batch form) and Leaky ReLU for UNet model. Fixed issue where batch was set to 1 accidentally earlier in driver.py. Implemented predicted mask plotting compared to the true mask. Added the ability to save the generated plots and a related conditional statement. Changed names of dice methods to closer resemble the objective of the task. + +commit 4fd96e613ac0c0e725145565526b9910afabfc68 +Author: MujiDipto +Date: Fri Oct 29 23:54:34 2021 +1000 + + started working on expansive path of the model in model.py + +commit 60f0d1818bb42958bce554c71a9dcf3fbc7b43a1 +Author: 周脆脆 +Date: Fri Oct 29 23:46:46 2021 +1000 + + change some parameters in s4571084-gcn.py + +commit c7373c5b6493e8e95ebe44e39d9301a8cd545710 +Author: 周脆脆 +Date: Fri Oct 29 23:41:43 2021 +1000 + + add some comments for train/arguments/TSNE part s4571084-gcn.py + +commit fcaff620128b369a86d8eb63934b604e432dffa7 +Author: Richal Verma +Date: Fri Oct 29 23:34:41 2021 +1000 + + Add train and test functions for MNIST data with changes to the model as needed to fix bugs + +commit 73ae46158273068649841372ded37b02989e34e4 +Author: MujiDipto +Date: Fri Oct 29 23:24:57 2021 +1000 + + add comments on create_model() in model.py + +commit b356999ab6c0a61d86adc2831c4e7c6dca0aae6e +Author: zaragolshani +Date: Sat Oct 30 00:21:01 2021 +1100 + + preprocess images and labels script created + +commit a450b22c1b837cf957c303a5f3692781717d2e3b +Author: tomdx +Date: Fri Oct 29 23:19:19 2021 +1000 + + Change VQVAE encoder/decoder layers + Add default max images to load data + +commit ec5ff4808f5c89eec5113403505ca006ab046785 +Author: MujiDipto +Date: Fri Oct 29 23:07:28 2021 +1000 + + Completed level 4 and base of the model, added annotated image of the improved unet architecture + +commit 5ed2e8d16ec83c97ad1cb920b40016a5b3b95e22 +Author: tomdx +Date: Fri Oct 29 23:04:29 2021 +1000 + + Change PixelCNN to sequential model + +commit 385b27443423abe9062965c0fd95792bf326113a +Author: Edward_Guilfoyle +Date: Fri Oct 29 22:55:58 2021 +1000 + + Removed the colab references + +commit c16455c97cd11b78ca74e694659ab765e65f0794 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Fri Oct 29 22:55:22 2021 +1000 + + Add files via upload + +commit 2088f429d5055f0cfa081ceeab16dfe3a285d5e6 +Author: Edward_Guilfoyle +Date: Fri Oct 29 22:54:20 2021 +1000 + + Fixed a errors + +commit 386a54be4dcacbc0ab4ad78c1fd1988bf6f14fba +Author: Joshua +Date: Fri Oct 29 22:48:15 2021 +1000 + + Added File Loading Functions in Driver, defined Global Variables + +commit 0550d8702b5a87d957ab158ca6e2c3744a2e737e +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Fri Oct 29 22:28:15 2021 +1000 + + Added docstrings for functions and included more thorough commenting of code. Removed pixelCNN custom callback as it prolonged training too much. + +commit 9a90514de41de2ad89e1fd0710a2ad3ebef4b5d0 +Author: Nifu +Date: Fri Oct 29 22:15:07 2021 +1000 + + Remove scheduler + +commit a829be47bb757183ce83ff95b786ca0c2d94182f +Author: Avinash Chandra +Date: Fri Oct 29 21:42:16 2021 +1000 + + StyleGAN structure with basic GAN from Demo2 + +commit b569f3907c2fe8c2a9d51e91aad37d372038bae5 +Author: MujiDipto +Date: Fri Oct 29 21:34:45 2021 +1000 + + complete level 3 of contracting path of the model + +commit 27ece3717648638338fe08b911984068c6a13e3e +Author: MujiDipto +Date: Fri Oct 29 21:31:21 2021 +1000 + + added strides as a parameter for create_conv2d function, completed upto level 2 of contracting path, renamed some variables + +commit 878a005b94dc1b55efcf455e47fe4f95027e128e +Author: Shiyan Tang +Date: Fri Oct 29 21:25:42 2021 +1000 + + Upload some images generated by the trained pixelcnn model(trained for + 600 epoches) under differnt learning rates. + +commit 1be93077e40db9f9d01eebee2c6e7a11e3bf9bf2 +Author: Edward_Guilfoyle +Date: Fri Oct 29 21:23:06 2021 +1000 + + Credit in yolo loss, updated readme. + +commit 23875c79a0f5c376f80c57bb6a099dc4bc3ad76c +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Fri Oct 29 21:20:37 2021 +1000 + + Update README.md + +commit d6f83ffcb94639e1795c7d5de69fa7796799bf30 +Author: Khac Duy Nguyen +Date: Fri Oct 29 18:18:28 2021 +0700 + + Extend the Perceiver Transformer + +commit 443b6984d6482ba9ab8e677516c60143c3b324d7 +Author: Shiyan Tang +Date: Fri Oct 29 21:16:30 2021 +1000 + + Update the driver file. + In the previous version, the pixelCnn is trained on module pixelcnn2.py (have the same content as pixelcnn.py on github), which is not uploaded to github. + Now remove the library and train the model on pixelcnn.py. + +commit b938429de3391b38fedb7f2ea4b138e32cd4ec47 +Author: Edward_Guilfoyle +Date: Fri Oct 29 21:11:27 2021 +1000 + + Final commit, updated readme + +commit 8b4292236d042b8ba33e35431a4748091880d8ca +Author: Nifu +Date: Fri Oct 29 21:11:11 2021 +1000 + + Create sample dataset directory + +commit 5d783bf82022a350ea3dcca7dd4d0b1403b05b40 +Author: Edward_Guilfoyle +Date: Fri Oct 29 21:08:49 2021 +1000 + + Read.me update + +commit 3d548dd94896f33917d1a5c1d568f5ec6dddb869 +Author: Edward_Guilfoyle +Date: Fri Oct 29 21:07:38 2021 +1000 + + Read.me update + +commit 90e59d8bb5da450a56c6a2de1a634f6db128cd2b +Author: Nifu +Date: Fri Oct 29 21:05:09 2021 +1000 + + Move all files to the upper folder + +commit 37e62f0cf8910cdf80be54fe3be4fdfdfcb625ba +Author: Keith Dao +Date: Fri Oct 29 21:04:40 2021 +1000 + + Updated comments. + +commit a1fe754e9667e1e46744e327df2423c034eeb7df +Author: leecwj <37468566+leecwj@users.noreply.github.com> +Date: Fri Oct 29 21:04:38 2021 +1000 + + plot now shows dice similarity coefficient for each prediction + +commit 81e659466615ed7545290382e9c1e242de45cab8 +Author: Edward_Guilfoyle +Date: Fri Oct 29 21:02:33 2021 +1000 + + Fixe readme images + +commit 0385e04335f35f57574a9ff9ed050d295cc1ca27 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Fri Oct 29 19:01:04 2021 +0800 + + genernate trian.txt + + from yolov3, in order to generate the train.txt file + +commit dba8ad86f6c7be8a733fa2e9af3c606274bc69e4 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Fri Oct 29 18:59:53 2021 +0800 + + Delete divide.py + + the dataset dose not need to be divided + +commit 363ab73ff39bf1244fa4b30b4180cb89447a603c +Author: Edward_Guilfoyle +Date: Fri Oct 29 20:57:57 2021 +1000 + + Updated read.me, including notes and images about the results + +commit 482999ce3505e078a2bc909cfb9e3d6f34040bb9 +Author: Khac Duy Nguyen +Date: Fri Oct 29 17:56:06 2021 +0700 + + Implement Perceiver + +commit 5500a800e5202eb9d0af4966c858cac929e426ac +Author: MujiDipto +Date: Fri Oct 29 20:55:53 2021 +1000 + + added initial num of filters as global constant to avoid magic numbers + +commit 37e71b0d5cb2ff0b714dcfa7148bc47b10f74615 +Author: Nifu +Date: Fri Oct 29 20:55:14 2021 +1000 + + Add demonstration in the notebook + +commit 6cf1e89acc41abadf350a41dde9425b49ba31a1f +Author: SteveInUQ +Date: Fri Oct 29 18:48:11 2021 +0800 + + add new files (the result of model accuracy and tsne) + +commit 8b1b3f6915bff5379eb1b02d29a04d3677204d1a +Author: MujiDipto +Date: Fri Oct 29 20:47:38 2021 +1000 + + started working on building the improved unet model in model.py + + completed input layer + started contracting path + +commit 921e91de5f2675e250a0e66934d8afb4db27761e +Author: ltaylor231 +Date: Fri Oct 29 20:46:31 2021 +1000 + + completed firest iteration of README + +commit c40561c90b878a23ab6c3957f6e0758613ba54d9 +Author: SteveInUQ +Date: Fri Oct 29 18:46:12 2021 +0800 + + Create a test drive script to call and run my model + File inclues load data, train model, plot accuracy and tsne + +commit 2ac496d56759106ba774dcd66528e45ebec7f254 +Author: Khac Duy Nguyen +Date: Fri Oct 29 17:44:50 2021 +0700 + + Add driver script + +commit 70ec20009d0121db96fa0ae50705d2cd86426b86 +Author: Edward_Guilfoyle +Date: Fri Oct 29 20:43:30 2021 +1000 + + Added some history plots, fixed an error causing GOOD results to be BAD in the conversions from yoloBox too standardBox + +commit 4b5a2fa04d333ce7c16a9305dcad4b00fc105195 +Author: ltaylor231 +Date: Fri Oct 29 20:36:25 2021 +1000 + + Added model evaluation, generating plots of accuracy and dice coefficient. Also example input, ground truth and result plots. + +commit c525742bb4522400c1554d39ddf14b1f9de08169 +Author: leecwj <37468566+leecwj@users.noreply.github.com> +Date: Fri Oct 29 20:19:16 2021 +1000 + + validation and test sets are now used + +commit 0b9484f27caa278763c79c02758ddb8471dcf5da +Author: Korbin Daly +Date: Fri Oct 29 20:08:49 2021 +1000 + + Lowered learning rate and now the custom loss dice function works now + +commit c2cec272374ce96a7ab6ab4443448047bc39cf00 +Author: Tony +Date: Fri Oct 29 20:05:56 2021 +1000 + + plot prediction images. + +commit 079fd5a55ca87db2b97e4234c6d6c022d5e2c543 +Author: Khac Duy Nguyen +Date: Fri Oct 29 16:53:49 2021 +0700 + + Fourier Encoding + +commit 7a8acee87208ad37de21e8a4800a060d8315623e +Author: Your Name +Date: Fri Oct 29 19:52:56 2021 +1000 + + Fix a bug in dice py and run 30 epoch to get 0.8 coefficient. + +commit 89c3a20d3849eda4cbdfdef0acda440356f0bd1e +Author: Khac Duy Nguyen +Date: Fri Oct 29 16:48:39 2021 +0700 + + Fix Attention + +commit d3f8f0831b75e9738fc372776dac3e14fad5e950 +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Fri Oct 29 19:46:14 2021 +1000 + + Update README.md + +commit c0e7349b5f3152952f434f05e38594ffc2cd8269 +Author: MujiDipto +Date: Fri Oct 29 19:41:57 2021 +1000 + + add docstrings for localization module in model.py + +commit bfec1ba9b8eea087761c9ad78dcb005208c13302 +Author: MujiDipto +Date: Fri Oct 29 19:40:08 2021 +1000 + + complete localization_module in model.py and updated docstrings for create_conv2d + +commit 0dec990ff13086ada7dd1bcf6d8ead911005f9e6 +Author: MMMMMYY +Date: Fri Oct 29 19:37:42 2021 +1000 + + delete wrong files + +commit 9a7db687547fe2391dff2ac0adabfeae2c3ccdc1 +Author: MujiDipto +Date: Fri Oct 29 19:37:33 2021 +1000 + + added kernel_size as parameter to make create_conv2d function more versatile in model.py + +commit 5fc307ff0da9a33dec87870b5e4f7c30360dd16d +Author: MMMMMYY +Date: Fri Oct 29 19:35:39 2021 +1000 + + Update test_.script.py + + upload some training function + +commit 1d4385cf200be07dca420ffd75f651657b9bd07c +Author: Khac Duy Nguyen +Date: Fri Oct 29 16:34:37 2021 +0700 + + Create README and attention mechanism + +commit 4957fcb8b3d20539abfcf70f5d4bd767f30e71ee +Author: MujiDipto +Date: Fri Oct 29 19:33:46 2021 +1000 + + add docstring for upsampling module in model.py + +commit 1d941c5a536f61a63915efb31a00959b8b06755a +Author: Edward_Guilfoyle +Date: Fri Oct 29 19:32:26 2021 +1000 + + Last code commit. Big update: Added conversions from yoloBox to standardBox, changes jaccard index to be accurate (this still needs to be improved). The IOU within the loss needs to be fixed, should utilize the method within the jaccard index. Ran model on colab, but it produces bad results. Namely due to no sigmoid activation function and the IOU calculation in the loss is not correct. + +commit 99c9536add21ab38f94a45b2944062fc9751f638 +Author: MujiDipto +Date: Fri Oct 29 19:31:13 2021 +1000 + + Completed upsampling module on model.py + +commit 0a2c8d54c17a63ec73ec0790402f448975f7144d +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Fri Oct 29 19:18:33 2021 +1000 + + Update README.md + +commit 57ae66a9dc12ec0fb8d8075fda99d202a80cdf9f +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Fri Oct 29 19:18:03 2021 +1000 + + Update README.md + +commit 6ed39aa569ba393bb1bef5c586649172e1f9fdb0 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Fri Oct 29 19:13:36 2021 +1000 + + Update README.md + +commit a220b3ec95c2c3df8193e37ad35ddce29963cf01 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Fri Oct 29 19:13:09 2021 +1000 + + Update README.md + +commit 10ae6eca2ea3a46aefef2de7f17180d8553d7e88 +Author: SteveInUQ +Date: Fri Oct 29 17:05:46 2021 +0800 + + normalize the feature data + +commit f5a761f8d7b2f13da0a7fc1b5aeef4fb55989e32 +Author: SteveInUQ +Date: Fri Oct 29 17:02:06 2021 +0800 + + change 2 classes to function(normalize_adjacency and one_hot_encoding) + +commit 36ad3326df82d0acb3864b3e50cccb758a67c92d +Author: Your Name +Date: Fri Oct 29 18:56:09 2021 +1000 + + Fix some debugs when runing main.py + +commit 2e9b257002b0d2f92f0ee2b575163f1270ca6227 +Author: MMMMMYY +Date: Fri Oct 29 18:51:03 2021 +1000 + + Update model.py + +commit e088de1334371f053d104da34e07e676057ee8f9 +Author: MMMMMYY +Date: Fri Oct 29 18:50:18 2021 +1000 + + Update test_.script.py + +commit 222d96685dd9e02b0519e2781551ac1928ad8a9c +Author: SteveInUQ +Date: Fri Oct 29 16:48:06 2021 +0800 + + try to add layer to improve the performance + +commit d776d24df3e595756290025f07a9611d75830791 +Author: Joshua +Date: Fri Oct 29 18:37:08 2021 +1000 + + Added Downsampling, Upsampling functions, connected architecture in Model + +commit 5b50846c28c6b533b0d052fa8b1b1651e40c7648 +Author: MMMMMYY +Date: Fri Oct 29 18:36:45 2021 +1000 + + commit initial model.py and test_script.py + +commit bbf908dc47d3d7d8344dc7083888f87274421d6b +Author: Keith Dao +Date: Fri Oct 29 18:34:38 2021 +1000 + + Added file overview of the repository and usage notes. + +commit 696af303563229a1292b30b7035c0c13d0143d4c +Author: Your Name +Date: Fri Oct 29 18:31:46 2021 +1000 + + Run average_dice to get average dice coefficient of test data. + +commit 0a428f3a3c9dfaf5b66a1a4a02a7e276a7a48ae8 +Author: Your Name +Date: Fri Oct 29 18:30:08 2021 +1000 + + Implement a function to compute average dice coefficient. + +commit 4179f6c6936487ff42c38f830986ac89ce8cbce1 +Author: Nifu +Date: Fri Oct 29 18:24:31 2021 +1000 + + Add test loss/accuracy/dice_coef + +commit 00c7947d86274db041a7548291fa8d2a165ffb2e +Author: MMMMMYY +Date: Fri Oct 29 18:23:42 2021 +1000 + + create readme.md + +commit bd7e8f624587b600001286b2b00b0c375fe4e578 +Author: MMMMMYY +Date: Fri Oct 29 18:23:10 2021 +1000 + + 11 + +commit 87f565c204c8fe2a945b4622bfc04a6f8e847d47 +Author: Your Name +Date: Fri Oct 29 18:18:59 2021 +1000 + + Training model and modified model since remind out of memory. + +commit c3cb623c061d6d1f7f209a97c9e4815a9154e206 +Author: Korbin Daly +Date: Fri Oct 29 18:17:08 2021 +1000 + + changed loss to custom loss dice function (not working correctly) + +commit c65bea5a4ff37228388ecb8444a71fff33ac54fb +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Fri Oct 29 18:15:16 2021 +1000 + + Update README.md + +commit a821de6b0bb5fad4544ceeaefcce3b2640013b9e +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Fri Oct 29 18:11:06 2021 +1000 + + Update README.md + + shortened some paragraphs + +commit 94b881f159bab475cce4102bde9b373b941be7e9 +Author: Cherian John +Date: Fri Oct 29 18:10:41 2021 +1000 + + Fixed renaming issue between local and remote improved_unet.py + +commit a73ca672b04139855a7f6c34361d6a24103ae916 +Merge: 6f807c62 e7c46cce +Author: Cherian John +Date: Fri Oct 29 18:09:11 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/cherianjohn/PatternFlow into topic-recognition + +commit 6f807c623bd8375d3a65d0c370a5b16763efa8c2 +Author: Cherian John +Date: Fri Oct 29 18:04:52 2021 +1000 + + Algorithm is now able to get 0.9 accuracy and 0.8 dice coef + +commit e7c46cce972ac4096d7138f59bbce12a5807b74d +Author: Cherian <51251921+cherianjohn@users.noreply.github.com> +Date: Fri Oct 29 18:01:41 2021 +1000 + + Rename Improved_Unet.py to improved_unet.py + +commit 1825621f1a1319879363bffeb543edf5cc8b251b +Author: Your Name +Date: Fri Oct 29 17:57:30 2021 +1000 + + Modify plot function to plot more figures. + +commit fa9cab47009ab0a8bbd5301a0df19a6e447217fa +Author: Your Name +Date: Fri Oct 29 17:54:13 2021 +1000 + + Test data split wrong, should use [-test_size:] + +commit 45239d49efee4154ae4e70c9e06b1f47263a72f8 +Author: tomdx +Date: Fri Oct 29 17:40:03 2021 +1000 + + Create driver file + +commit 6af26fdfd12ff723117a4a6807ca60fd616d621e +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Fri Oct 29 17:24:58 2021 +1000 + + Update README.md + +commit f7029f356d3b40407b7eb6190329afb64253e587 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Fri Oct 29 17:22:38 2021 +1000 + + Update README.md + +commit 3541b867cfacb313e9e96baa8f509230416e0568 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Fri Oct 29 17:21:57 2021 +1000 + + Add files via upload + +commit 6a29ef3fc9c1f6d5da825a0043b8af2382cc0307 +Author: Zhien Zhang +Date: Fri Oct 29 17:11:52 2021 +1000 + + Implemented latent mapping and style mixing with AdaIN + +commit a4843b0a5fb605e9eee9333ad0bbbfb3f0def68c +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Fri Oct 29 17:06:53 2021 +1000 + + Update README.md + +commit 2760693e4ba5b71941f688a3028bd269461f7b24 +Author: Korbin Daly +Date: Fri Oct 29 17:06:37 2021 +1000 + + stable version using binary_crossentropy, normalisation has returned on X sets + +commit 0439678b0347fed7becaedd6e2a0d558f4fd3bc1 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Fri Oct 29 17:06:23 2021 +1000 + + Add files via upload + +commit 74f9912a81012584479bc8595857468fd03a6d70 +Author: Yash Talekar +Date: Fri Oct 29 16:56:21 2021 +1000 + + added main function and dice coeff in driver + +commit 8e1d4fdabd89c7e789be34c5606431f95e53ea12 +Author: kamenii +Date: Fri Oct 29 16:43:44 2021 +1000 + + Added initial README.md\n Added mapping network implementation to models\n Added A, B, AdaIN blocks\n Added run script invoking training and styleGAN trainer accordingly + +commit e15d04c4846344247595bae1b8d8ee42028e2db0 +Author: Nifu +Date: Fri Oct 29 16:30:07 2021 +1000 + + Add evaluate function for the model + +commit 1e0495c475af3548394923daa639ab283c914ab3 +Author: Mallika <55978813+mallika-x@users.noreply.github.com> +Date: Fri Oct 29 16:22:48 2021 +1000 + + Added compiling and training of PixelCNN. + +commit 9a16d1227404613a22a0f965767035478c87b256 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Fri Oct 29 16:20:55 2021 +1000 + + Update README.md + +commit a758cd839f6948afa29f825c2fbc763f8cd53e6e +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Fri Oct 29 16:20:40 2021 +1000 + + Add files via upload + +commit 58e5e4efb51a8cbb2621ff5cd83935feca898d7b +Author: lucaslin2020 <75237235+lucaslin2020@users.noreply.github.com> +Date: Fri Oct 29 16:16:19 2021 +1000 + + Create README.md + +commit c14cc23642253b6ad6a539942e70b144aed87335 +Author: LABS\s4539629 +Date: Fri Oct 29 16:01:50 2021 +1000 + + Added weighted categorical cross entropy loss (untested) + +commit d343c9bd3ab418c5f2b26e59d935c0a036ce4856 +Author: Keith Dao +Date: Fri Oct 29 15:51:59 2021 +1000 + + Fixed the incorrect learning rates. + +commit 2a8deaf1c1c0c995de114ce77e6cf8633b6f7ca5 +Author: Nifu +Date: Fri Oct 29 15:47:57 2021 +1000 + + Add plot for metrics + +commit 1123d3dde3a6b4aaa5a1d3542d1df7ae1308d446 +Author: Christian +Date: Fri Oct 29 15:43:15 2021 +1000 + + Update README.md + +commit e543d570adbfe84859d66df3ce1703a19718c4f8 +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Fri Oct 29 13:32:57 2021 +0800 + + divide the data set into train test + + 80% for trian 20% for test + +commit 870f0255675087f651a71b376e7b66a0ba84c6ad +Author: tomdx +Date: Fri Oct 29 15:22:26 2021 +1000 + + Achieve 55-58% structured similarity (if lucky) + +commit 1185e1b0d09f6dab39f946b55cbfda36c76c2b26 +Author: Tony +Date: Fri Oct 29 14:56:00 2021 +1000 + + Added z_norm to image generator. Corrected prediction print. + +commit 7bfc434d9be8ef5cfb72e5535d4c763ebb72b5a0 +Author: Keith Dao +Date: Fri Oct 29 14:54:35 2021 +1000 + + Using gaussian noise rather than uniform noise for noise images. + +commit a63a172d9c536e2704b710ab23779e54e0a28a82 +Author: Mallika <55978813+mallika-x@users.noreply.github.com> +Date: Fri Oct 29 14:53:28 2021 +1000 + + Added generation of codebook indices. + +commit af185fa29e41f6829db98ec5c29d819c53565555 +Author: Keith Dao +Date: Fri Oct 29 14:52:37 2021 +1000 + + Added some comments. + +commit 55e4a4a7800f4939cc19c95d360a9c3851a0f8bf +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Fri Oct 29 12:51:39 2021 +0800 + + first version of yolov3 + + first version with a lower acc + +commit 73440086de831cc8513c43c69e191061fdb6525b +Author: Joshua +Date: Fri Oct 29 14:45:10 2021 +1000 + + Added Context, Localization, Segmentation Module functions in Model + +commit a7543abfd4b736c35f9b73e63c4f7242b48f73d4 +Author: Christian +Date: Fri Oct 29 14:42:48 2021 +1000 + + Update dataloader.py + + fixed issue on model not inferencing properly + +commit 790762b05f68f803754969b8cc8da983a22df55f +Author: tomdx +Date: Fri Oct 29 14:40:05 2021 +1000 + + Add Pixel CNN creation and training + +commit a8158d14adda79e384d4b41c7ae91aa6265e1063 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Fri Oct 29 14:31:40 2021 +1000 + + Update README.md + +commit 7d253c65f8fd4add8d91e3cfd3122dbbb59c7cfb +Author: Tony +Date: Fri Oct 29 14:13:03 2021 +1000 + + DSC appears to be working correctly, although values need improvement. + +commit c08be44e70658f0d66e44a8fe8ed2f3814144ddf +Author: glenyue <93363361+glenyue@users.noreply.github.com> +Date: Fri Oct 29 12:06:07 2021 +0800 + + Create README.md + + Yolov3 + +commit 7d3ca91254ccbc62601f37584be396660129ae2d +Author: Yash Talekar +Date: Fri Oct 29 14:03:28 2021 +1000 + + renamed model file and further improved model + +commit 6b01a71e2eb0e121f61ff6d8fb7be010c9238668 +Author: Keith Dao +Date: Fri Oct 29 14:00:33 2021 +1000 + + Added exception when no images are loaded. + +commit 9a8091eacffcc0f2e50d894e7276546440788f3b +Author: tomdx +Date: Fri Oct 29 14:00:06 2021 +1000 + + Add pixel convolutional layer and residual block layer + +commit 8e7ffa20b65b1229be38875633822219dd2dfc2a +Author: Keith Dao +Date: Fri Oct 29 13:59:21 2021 +1000 + + Removed unused parameter. + +commit efc749d65e7dc0a2ac4ae8989709ed9594cd15de +Author: Lee Jian Yang +Date: Fri Oct 29 13:41:53 2021 +1000 + + dice score and graph plottinng + +commit 4589defa8075deb9844a058ed354642d5542fac2 +Author: tomdx +Date: Fri Oct 29 13:18:35 2021 +1000 + + Add validation test set + Style changes + +commit 6027797391c33cef236172ec1aab4ca7e24e4251 +Author: tomdx +Date: Fri Oct 29 13:14:44 2021 +1000 + + Add validation dataset to data loader + +commit 5c3eb35a42d4874fdd0bf943f6f88e4a43a49ad2 +Author: vniernvhid <93361859+vniernvhid@users.noreply.github.com> +Date: Fri Oct 29 13:02:00 2021 +1000 + + Create README.md + + create README.md file + +commit 85b6727a6ca870403f6527a7c98e0fb25dd66fef +Author: Mallika <55978813+mallika-x@users.noreply.github.com> +Date: Fri Oct 29 12:45:03 2021 +1000 + + Added support to load models and data set files in Collaboratory. + +commit e417cd0ce211e43499ab5a1fdf9606800db04e1d +Author: Richal Verma +Date: Fri Oct 29 12:38:52 2021 +1000 + + Add function stubs for MNIST VQ VAE + +commit bdfd81831299dba5a08cdf44acbc2dd99a8a25e0 +Author: LABS\s4539629 +Date: Fri Oct 29 12:37:43 2021 +1000 + + Augmenter: Aug count now a parameter. Fixed bug in flip - now only flips on Axis 1 (left/right). + Model: Implemented Dice Similarity (F1 Score) - only works on eager mode + +commit 0ec3cf293cd9eb7381e954541ec98555cf6a6144 +Author: SteveInUQ +Date: Fri Oct 29 10:02:43 2021 +0800 + + update the comment + +commit 05103c6b8689e8ae49947fae25d769d42eeefa64 +Author: Rick W +Date: Fri Oct 29 11:58:07 2021 +1000 + + switch to mean and sd normalisation + +commit 9c6c3d864b702867c4731419992a2faa1a8b3969 +Author: Lee Jian Yang +Date: Fri Oct 29 11:54:00 2021 +1000 + + model up and running, training now begins + +commit 21affe039dadbf7a864bfefedb2ffabc2336675d +Author: d7a7 +Date: Fri Oct 29 11:52:37 2021 +1000 + + Completed data pre-processing and loading function. + + The function pre_processing() in the Data_loading program can now load + and pre-process test and train data. The data is currently split with + 80% of the images being used for training data and 20% used for test + data. Further Train/Validation splits will be implemented later. + +commit ca082c13ca4fcf72f1504364faa6c30cb1ec2157 +Author: Djamahl +Date: Fri Oct 29 11:25:24 2021 +1000 + + remove old folder + +commit 7d888aa1ad1fbcaf227e031041bb4b7a5892bbf3 +Author: Djamahl +Date: Fri Oct 29 10:49:55 2021 +1000 + + change folder name + +commit 5099fe33461b68969ed12ebc2a64e36bb733541b +Author: Djamahl +Date: Wed Oct 27 21:00:35 2021 +1000 + + fix test history dividing by number of training samples for average + +commit 1de286ba1513fdc5c8c30f94f55427512bff80f9 +Author: Djamahl +Date: Wed Oct 27 19:17:43 2021 +1000 + + training working on goliath, tried to make input preprocessing capable with tf2.1 on goliath then used miniconda + +commit cae4ba1ecb7f10f8072cdeadc03f3e026328bcb5 +Author: Djamahl +Date: Tue Oct 26 12:21:17 2021 +1000 + + generate labels systematically with train, test split + +commit d771fdf09c2b54746dce8ac2b41d54bf8962868a +Author: Djamahl +Date: Tue Oct 26 12:18:53 2021 +1000 + + example working on akoa + +commit 85eb2ef4d5b56b588edca4aab99c0819f29ebd88 +Author: Djamahl +Date: Tue Oct 26 09:56:12 2021 +1000 + + initial testing with keras example, began writing code for data input + +commit c87f3c559ea642362be0b9f6cfe0bd90e6f2420d +Author: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> +Date: Fri May 21 16:50:13 2021 +0000 + + Bump tensorflow in /algorithms/transform/s4371869_radon_transform + + Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.0.0 to 2.5.0. + - [Release notes](https://github.com/tensorflow/tensorflow/releases) + - [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md) + - [Commits](https://github.com/tensorflow/tensorflow/compare/v2.0.0...v2.5.0) + + Signed-off-by: dependabot[bot] + +commit e61c9952b8449198f9e4ff4d8279275290739b11 +Author: Kareem Kharoub +Date: Mon Nov 2 08:48:12 2020 +1000 + + updated dice coefficient methods + +commit 71d667a2b0e500661d2074f3a9c0653c458afe1f +Author: Kareem Kharoub +Date: Sun Nov 1 23:20:42 2020 +1000 + + change upsample to bilateral, updated DCS calc, added DCS as metric, updated training plot + +commit deb339006c2efb02b1cbee064f1d7c1fd33e8112 +Author: Kareem Kharoub +Date: Sat Oct 31 22:57:48 2020 +1000 + + first draft of documentation and test script include output data + +commit 30a0568096afbe18d7d4b7d9a46bb4eee52e185b +Author: Kareem Kharoub +Date: Sat Oct 31 20:14:17 2020 +1000 + + creating seperate test script + +commit 2397c12537d1e95ac656843a8cd5b3dc15d3d52b +Author: Kareem Kharoub +Date: Sat Oct 31 20:12:39 2020 +1000 + + created test script in seperate file and added script to display model output + +commit aae50675c2471f672e18a280830db4d36091c4f8 +Author: Kareem Kharoub +Date: Sat Oct 31 19:33:02 2020 +1000 + + updated test script with early stop call backs and function to save and load model weights + +commit e75aa0755f84d5eabde4021e05a8d226bda43e39 +Author: Kareem Kharoub +Date: Sat Oct 31 19:22:25 2020 +1000 + + completed and validated testing script + +commit 7a2bef6b45fe2e646a4789c09a5755bad7a415c1 +Author: Kareem Kharoub +Date: Sat Oct 31 18:45:34 2020 +1000 + + developed image loading part of test script + +commit 32f9e37d1b1419d8bffd38bf40c7c5cff8e2e03d +Author: Kareem Kharoub +Date: Sat Oct 31 17:57:22 2020 +1000 + + improved unet implemented + +commit 638f44588bccf22f5a4af758372f6ca1e4bb161b +Author: Kareem Kharoub +Date: Sat Oct 31 16:37:22 2020 +1000 + + includes data load and processing methods + +commit fba002261677ade4fff8c2818d53bbccaa7eb988 +Author: Kareem Kharoub +Date: Tue Oct 20 07:20:41 2020 +1000 + + testing connection with remote repo + +commit 1cbab6dbf335ef1006f519b55de80e8fd53daaa9 +Author: Christian +Date: Fri Oct 29 11:09:34 2021 +1000 + + Create Test Driver - Mask RCNN.ipynb + + generate Test Driver in jupyter notebook + +commit 0b8100185af5dcf72510f3f11df9205c088373e0 +Author: Christian +Date: Fri Oct 29 11:09:17 2021 +1000 + + Create README.md + + Update Readme + +commit 6c412d9ddcca14867a8c85a7c351b21a4efb62bd +Author: Christian +Date: Fri Oct 29 11:09:05 2021 +1000 + + Delete ReadMe.txt + +commit 6e6a45c312d9c97a6dc5f3735e04e3c0843cf537 +Author: Joshua +Date: Fri Oct 29 10:05:58 2021 +1000 + + Added model and driver script + +commit c0ee5f5b46862864ff5873777c644f9b58ac70b1 +Author: Lee Jian Yang +Date: Fri Oct 29 10:04:47 2021 +1000 + + upsampling2d in model + +commit 2472b99bf28ef642aa380024ff81afb3f8d798a8 +Author: Nifu +Date: Fri Oct 29 09:42:56 2021 +1000 + + Update dataset instruction + +commit 47fbaf1b336a37386c0a9a16c4611a4ba53f22f9 +Author: Nifu +Date: Fri Oct 29 09:10:29 2021 +1000 + + Update library requirements + +commit f50112e1df23cdc95e06c6cc32cdc54970f760e0 +Author: Tony +Date: Fri Oct 29 09:00:59 2021 +1000 + + DSC class coef appears to work. Commit before cleanup. + +commit 055552bdf594fc2e1780964e6dd2e9a3c2c1677b +Author: Joshua +Date: Fri Oct 29 05:40:46 2021 +1000 + + Added Improved UNET Architecture in README + +commit d421132de20a7f1fb3ed7f33daeb92bc529c2334 +Author: Joshua +Date: Fri Oct 29 05:17:19 2021 +1000 + + Added Data Preprocessing in README + +commit f8bb99156848ec1a1b81aae34eb3e362d785113f +Author: cristina1096 +Date: Thu Oct 28 17:58:26 2021 +0000 + + Finish generator network and mapping network + +commit 9f11f90b4e6f07a4ef1c253183a0925b88df8b9f +Author: Richal Verma +Date: Fri Oct 29 02:10:28 2021 +1000 + + Implement VQ VAE model combining encoder, decoder with the VectorQuantizer in the middle + +commit f0e45082618d586605855e3e9e03682cc6987cff +Author: Richal Verma +Date: Fri Oct 29 02:00:07 2021 +1000 + + Remove unnecessary parameter + +commit d898ecd7fb722079a7b8d1fe67579c80c51d79c9 +Author: Richal Verma +Date: Fri Oct 29 01:57:43 2021 +1000 + + Implement functions for creating encoder and decoder model based on parameters expected for VAE trained on MNIST (these will be tuned later) + +commit 3a85e5fc536837ab796291df931f7f3fac78b201 +Author: Richal Verma +Date: Fri Oct 29 01:43:55 2021 +1000 + + Add VectorQuantizer layer to use in the VQ VAE + - Override call method to take a single input x and return the + quantization of this as the output + - Implement the calculation of loss for the VQ layer as per the paper + - Implement embeddings initialisation in VectorQuantizer.__init__() + +commit 38597c254981bcc0010cdceb77b5a9e3d302713d +Author: Richal Verma +Date: Fri Oct 29 01:43:18 2021 +1000 + + Add .gitignore + +commit 745b3400518b7f3656afcd48efb3493eac05f785 +Author: Mallika Mukherji +Date: Fri Oct 29 01:03:08 2021 +1000 + + Changed image plots from colour to grayscale. + +commit af7b92778dd1c531f657105460de41f4103e875c +Author: Zill wang +Date: Thu Oct 28 23:00:41 2021 +0800 + + Fixed small training process disly bug + +commit b94e015472216d6de49285c688963a19cb31f633 +Author: Mallika Mukherji +Date: Fri Oct 29 00:48:26 2021 +1000 + + Added SSIM for reconstructed images. + +commit f8d4d4670deba5c1953f3dab1cfebf9c33c00d59 +Author: Erin14 +Date: Thu Oct 28 22:28:55 2021 +0800 + + trained and tested with visualization + +commit 5602a413d9d340a5c4a3d8c66c74d4c75d6c8dd3 +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Fri Oct 29 00:25:11 2021 +1000 + + Started pixel cnn, no code yet though + +commit 3bb6d9e971ca9ba3b990530e30e31f8c1eae9f8c +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Fri Oct 29 00:17:54 2021 +1000 + + Fourier Encoder (Needs Testing) + +commit 3f35215216fe8dc6a46f725bcb0f2a42572e1581 +Author: David Phun +Date: Thu Oct 28 21:15:23 2021 +0700 + + Add common path file to make the specification of paths between files much easier + +commit a328fc711cfd5d02f7d0ab61ce37cc8a701a1cde +Author: Zill wang +Date: Thu Oct 28 22:14:34 2021 +0800 + + Update the driver file that can check the epoch's IOU in test set by epoch's weights + +commit afce56297261c5fc21b891798a6d0b1437dfafa5 +Author: Christian +Date: Fri Oct 29 00:07:03 2021 +1000 + + predictions on images + + Provide results of predictions on the full resolution images + +commit 098b9907f3b2d088be877d02bee10dbd47cdaa09 +Author: Christian +Date: Fri Oct 29 00:06:21 2021 +1000 + + training loss results + + Save loss graphs from training + +commit 9b56090926a0ef2be3de7b2dc8a5bcccfcd78511 +Author: David Phun +Date: Thu Oct 28 21:04:21 2021 +0700 + + Add script to train VQ-VAE prior + +commit b345c6e075afcf2b4faa8f76b5d0f25df30cc956 +Author: David Phun +Date: Thu Oct 28 21:03:55 2021 +0700 + + Add PixelCNN model + +commit aa24756b694f7b0d0df5f5be4bf446a79c63fa3f +Author: default-jamc +Date: Thu Oct 28 23:54:26 2021 +1000 + + Fixed leaky relu alpha, added Instance Normalisation, changed interpolation setting to bilinear, added instance normalisation to encoder path, changed input size + +commit 64d4cd89e1b0dd1eefdedd9ef6357e4a0dd56077 +Author: default-jamc +Date: Thu Oct 28 23:51:56 2021 +1000 + + Added in accuracy and loss plots, and prediction plots. Changed input image size, did general code documentation. Changed dice coefficient loss function + +commit 8b9f9c2c1287ca3e36426f89d38ff9b10f1f1ca2 +Author: 周脆脆 +Date: Thu Oct 28 23:33:47 2021 +1000 + + add TSNE part for gcn model in s4571084-gcn.py + +commit 058494c8e610690f0974cc2b469d61702f7c10a4 +Author: 周脆脆 +Date: Thu Oct 28 23:32:08 2021 +1000 + + add test function for gcn model in s4571084-gcn.py + +commit ccf09c20a104dcd43ef5338b1b06ddafc739c006 +Author: 周脆脆 +Date: Thu Oct 28 23:26:01 2021 +1000 + + add train function for gcn model in s4571084-gcn.py + +commit ddfe042ff06dce08a00920b6f92e2391c2f2d958 +Author: 周脆脆 +Date: Thu Oct 28 23:22:48 2021 +1000 + + add arguments for gcn model in s4571084-gcn.py + +commit 0fae4b493dda2c09191482489aaacc17ec6eb3f8 +Author: Vy Hoa Phun +Date: Thu Oct 28 23:17:22 2021 +1000 + + Rename the driver file to run and test the trained VQ-VAE + +commit 3cdcee3a768876f8b42a827788dcaf9943059f69 +Author: Vy Hoa Phun +Date: Thu Oct 28 23:15:22 2021 +1000 + + Modify the script of training VQ-VAE to make it compatible with the new model + +commit d997f2d40c76edbf9a228f80d160ea5d2b1bc570 +Author: Tompnyx +Date: Thu Oct 28 23:11:10 2021 +1000 + + The model will now exceed a Dice Similarity Coefficient of 0.8! Removed Kernel Initializer and activation from each Conv2D to fix static loss and improve performance. Modified the dice loss function to give the correct result and added soft dice as a metric for the model. Modularised certain functions in driver.py to implement conditional operation. Added the ability to save and reuse a model that had previously been trained. Reduced condition where an early stopping would occur (4 to 3) + +commit e90d000e0066919e1f715463ab49204545363085 +Author: Vy Hoa Phun +Date: Thu Oct 28 23:11:02 2021 +1000 + + Update the architecture of VQ-VAE and fix error in vector quantizer + +commit 965f149e5d085b511469182481bd731fc1686e1c +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Thu Oct 28 23:05:26 2021 +1000 + + Update table of contents in readme + +commit 0556d0f9ea53fe73ab79f36d5708b2dca330a549 +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Thu Oct 28 23:00:38 2021 +1000 + + Fixed errors in output size and loss calculation + +commit eec9f68abaae5df8d38ba4b82657d4aedff34f7a +Author: Richal Verma +Date: Thu Oct 28 22:55:58 2021 +1000 + + Create required files + +commit 94cc457e3760fbc4d402d44926682021a89a7b4d +Author: Keith Dao +Date: Thu Oct 28 22:26:54 2021 +1000 + + Added brief discription of gan loss. + +commit 322896d72ce609aa82e00ff8be36a7d547c3ec61 +Author: Keith Dao +Date: Thu Oct 28 22:19:22 2021 +1000 + + Added description of visualisation. + +commit b340b56380e59b247a2bbd3a7f3c9c20a0ea1f57 +Author: tomdx +Date: Thu Oct 28 22:04:34 2021 +1000 + + Improve structural similarity to 53-55% + +commit c1fedf3fc0f1c92a070a851bf13c2e57b2bf3952 +Author: Keith Dao +Date: Thu Oct 28 21:57:14 2021 +1000 + + Added description of model construction. + +commit c758f7b68c61f42540ebabea3c370990580da9bd +Author: Keith Dao +Date: Thu Oct 28 21:54:43 2021 +1000 + + Renamed gan.py to model.py. + +commit defb5bf31082a9400e8b671cd93f8b7627f67d57 +Author: Zgol +Date: Thu Oct 28 22:52:54 2021 +1100 + + added annotation creation script and readme files + +commit edf54946ea0fdf3f6dd767fe713cd9d84867eb7f +Author: Rick W +Date: Thu Oct 28 21:44:23 2021 +1000 + + save prediction result images + +commit b3c506c7952db673d6dabcc848838e50c1855df9 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Thu Oct 28 21:21:10 2021 +1000 + + Update README.md + +commit 3a111ccc0971aa2c6fe370bb3da27b051e5ba44f +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Thu Oct 28 21:20:09 2021 +1000 + + added info about skip connections to readme + +commit 42c311ef47779707a6dc0920d1b15161a75b9182 +Author: MujiDipto +Date: Thu Oct 28 21:08:47 2021 +1000 + + added docstrings for context module + +commit 589e00761e8b18a6b938b7114ca3fb5733a19059 +Author: Korbin Daly +Date: Thu Oct 28 21:03:31 2021 +1000 + + Implemented a binary_crossentropy version with 1 segementation output filter to prepare for dice implementation + +commit 5921694d9c242a31b9f78dfe0acf028fffdb1935 +Author: MujiDipto +Date: Thu Oct 28 21:00:01 2021 +1000 + + Completed context module for the model + +commit bad668200dab4530337a62deadefb5899eb00a2b +Author: kamenii +Date: Thu Oct 28 20:40:15 2021 +1000 + + Skeleton of the initial model + +commit 23644142cc23d49c801f26ea66e6391fd5680374 +Author: Nifu +Date: Thu Oct 28 20:27:15 2021 +1000 + + Generate plot sample + +commit 26c8d4354c4887dec467c2281277726cc5c6d515 +Author: Joshua +Date: Thu Oct 28 20:09:58 2021 +1000 + + Added Images in Resources Folder, Dataset in README + +commit 23220b75f725be9e1b1c0e317bf3d78dd357904f +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Thu Oct 28 20:08:20 2021 +1000 + + Update README.md + +commit 24279df2d187d966d46b0234f1bd4959983ca867 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Thu Oct 28 19:53:26 2021 +1000 + + Add improved unet model information + +commit 273298950ec3b4ae580d1e3b5574210c2fcc273b +Author: Kristian Thomassen +Date: Thu Oct 28 19:51:04 2021 +1000 + + Fix variable typo in pixelcnn.py + +commit 49ecc8e335a740e774f01b13bd10211f3ef3881b +Author: Joshua +Date: Thu Oct 28 19:47:46 2021 +1000 + + Added Introduction, Dependencies, References in README + +commit 5a55bdd5ca3d7ec195372d38e35e26605b20c67f +Author: Kristian Thomassen +Date: Thu Oct 28 19:42:19 2021 +1000 + + Add some more commenting in driver.py + +commit f4c676b023c5bc4db4039469347d185a16d3543c +Author: Nifu +Date: Thu Oct 28 19:40:28 2021 +1000 + + Create plots for predictions + +commit b55fdee30ad21d7973bbb76db9ca9f16c84cf884 +Author: Joshua Knowles +Date: Thu Oct 28 19:38:58 2021 +1000 + + Finish working driver script that trains on a subset of the data + +commit 078ece6238ed36e8b4f412b4618a81c20c168baa +Author: Joshua +Date: Thu Oct 28 19:31:06 2021 +1000 + + Completed Structure of README file + +commit 20df0b3db02abc6d9110f3cb6b9b81a7e1c7b46b +Author: Tony +Date: Thu Oct 28 19:30:46 2021 +1000 + + First attempt at dsc. + +commit c52de1a2ce42457c6815e875d37888b13084345b +Author: MujiDipto +Date: Thu Oct 28 19:28:51 2021 +1000 + + Add improve unet architecture diagram + +commit 4468f2cd3a936973303a9a4551f5193f24bf6cd2 +Author: Keith Dao +Date: Thu Oct 28 19:11:57 2021 +1000 + + Removed import for unused layer. + +commit fa3c072f07d4ac2d7bd133fe3026ff6a50355016 +Author: Kristian Thomassen +Date: Thu Oct 28 19:10:11 2021 +1000 + + Switch back to training normal dataset instead of validation + + Accidental previous committed change! + +commit 6f241a914e611c3bd4f2f697b10311d18ac1b406 +Author: Kristian Thomassen +Date: Thu Oct 28 19:07:05 2021 +1000 + + Initial PixelCNN model classes + +commit db8ee8ffe6de08e2d03a1629fd4fcacbcc97ec05 +Author: Keith Dao +Date: Thu Oct 28 19:01:12 2021 +1000 + + Added method name for data loading. + +commit 193a88fb70198659fb1a08fff3c6686102f108ea +Author: Nifu +Date: Thu Oct 28 19:01:03 2021 +1000 + + Add Improved UNet image + +commit 545c4c9d64165d2ffb1c6854b45d492b904a71f4 +Author: Tannishpage +Date: Thu Oct 28 18:38:51 2021 +1000 + + added reference to Figure 1 + +commit 6723ef7fda135c78924dae6b2fc1bb8bd272f372 +Author: Keith Dao +Date: Thu Oct 28 18:37:05 2021 +1000 + + Updated training results summary. + +commit 43064c660ce635558fef2b09348b3aaafed0016e +Author: Tannishpage +Date: Thu Oct 28 18:36:58 2021 +1000 + + Wrote some documentation on how to use the scripts, as well as a little background to the task and the results produced by the model. + +commit 2c582b51c38017518763b36417238be96bee005a +Author: Keith Dao +Date: Thu Oct 28 18:35:37 2021 +1000 + + Added some more references. + +commit e3b6b1230d97a150caedb47050276b58b0a72049 +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Thu Oct 28 18:33:01 2021 +1000 + + Moved loading data into its own file and added minst dataset to test + with + +commit d9be9c1944699231350714a6f3133db4735fce1b +Author: Rick W +Date: Thu Oct 28 17:55:34 2021 +1000 + + Remove prediction-sampling callback, reduce rotations to 3 + +commit 4a94203c8978f4caeb73f8fb201626959b9e75fa +Author: default-jamc +Date: Thu Oct 28 17:52:47 2021 +1000 + + Updated README, extended the Results section, added the Additions and Changes section. Briefly updated Output generated section + +commit 3899b96de1679bbc6f23182b21b8fa3a38394062 +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Thu Oct 28 17:46:32 2021 +1000 + + Now successfully splitting train data for features, labels and adjacency matrix. Splitting test data for labels and features but not yet adjacency matrix. + +commit 78e23a6d524e935de7e8fc9168dd8a7c5b327183 +Author: Anthony North +Date: Thu Oct 28 17:33:37 2021 +1000 + + bugfix: fix data leakage unit test + +commit b7fb6f55a8abafa4698c535276b560037181f232 +Author: Lalith +Date: Thu Oct 28 13:00:16 2021 +0530 + + Updated Readme file and added References. + +commit 1a314e9c85ccbbd3abe755cf99a934458278917e +Author: Lalith +Date: Thu Oct 28 12:59:06 2021 +0530 + + Removed file CITATION.cff + +commit 07073dcb1f3916aa78103734f55c42e2ddcf1a4e +Author: Nifu +Date: Thu Oct 28 17:20:07 2021 +1000 + + Create demonstration notebook + +commit c96885028675cc6f78fe000cdac783157cab3545 +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Thu Oct 28 17:02:48 2021 +1000 + + created README, updated driver values to reflect latest training + +commit 0aab34c729f7215ed1c91ee951d6bab38a6047cf +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Thu Oct 28 16:55:32 2021 +1000 + + Starting to split data into train/test. + +commit 252f24f630433218f2496d21454e7aced7035206 +Author: Joshua +Date: Thu Oct 28 16:50:30 2021 +1000 + + first test commit + +commit d817728eb0c6dbfe1f7edc3f7a5abc802598263e +Author: Korbin Daly +Date: Thu Oct 28 15:59:16 2021 +1000 + + Fixed imp unet errors, now implemented and compiling correctly. Seems to work good after removing normalisation from the X sets. + +commit 4f491da23aad7ca5ef1d12c93f5b20b8d60bd565 +Author: Tannishpage +Date: Thu Oct 28 15:07:03 2021 +1000 + + Added signatures to all code files, also added comments. main.py will now also save the model's weights + +commit a4f2d58b223bd16abe1dc1fa341f4eb43ada6491 +Author: Joshua Knowles +Date: Thu Oct 28 14:57:49 2021 +1000 + + Fix filter numbers in synthesis path + +commit 69f95bad61d18c9fbeb02625f26006285bae8538 +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Thu Oct 28 14:46:21 2021 +1000 + + Minor update to training look, added model saving. Now testing. + +commit 7f5997c61e25299ed7b219642f52e5d79532905a +Author: Tony +Date: Thu Oct 28 14:40:39 2021 +1000 + + Added validation generator, loss and accuracy plots, attempting model predict with prep generator + +commit d34de4a0db2d5cb9abb81a6637ad92f6a49b91a4 +Author: Nifu +Date: Thu Oct 28 14:40:37 2021 +1000 + + Create and compile the model + +commit d2d02e704866e3054b29f7fdbf5668c4aeaffd10 +Author: Tannishpage +Date: Thu Oct 28 14:40:08 2021 +1000 + + main.py will now plot some predictions on the test set along side the image and it's real mask, as well as calculate the average DSC on the test set + +commit a2662ea26e1c2af32c77f4a62c0a2b0df20420b3 +Author: Byron Downey +Date: Thu Oct 28 04:35:09 2021 +0000 + + initial commit to test + +commit 0707e790171f19968ed16710fd88d727169983e4 +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Thu Oct 28 14:31:45 2021 +1000 + + Separated code into model.py(only model-related functions), driver.py (only oasis dataset loading functions) and test_vqvae_oasis.py (runs the algorithm in its entirety) + +commit 8bc7f0a6d79cdd438daa58be6695113061f5af87 +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Thu Oct 28 14:29:22 2021 +1000 + + Completed rest of VQ layer and added training loop + +commit d5a8a7dde74018039d7bc9bda7987b46cefa9ddd +Author: Zhuoxiao Chen +Date: Thu Oct 28 14:19:23 2021 +1000 + + Update data_loader documentation + +commit e8eccf3d9fc239d2f8f83b0cf1a30ebc0dd236cd +Author: Zhuoxiao Chen +Date: Thu Oct 28 14:12:17 2021 +1000 + + Update some meaningful comments in network.py + +commit 850c5b8e2e30d65dff07fb318c49b59a92910903 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Thu Oct 28 14:04:50 2021 +1000 + + Update README.md + +commit 8145f3d5160e017260197f4740c1a4e832cff042 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Thu Oct 28 13:53:47 2021 +1000 + + Update README.md + +commit 72ba63c327e1fffe2b17573a087f3b1632251b0b +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Thu Oct 28 13:51:44 2021 +1000 + + Update README.md + + Added link to original unet model + +commit 5aaf95873a83f4b48b514c8cbd6c058c3272f4d9 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Thu Oct 28 13:48:06 2021 +1000 + + Update README.md + +commit 97e6b68fcb93dee0b3cc5fb91d0d0ee65cd6c085 +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Thu Oct 28 13:41:48 2021 +1000 + + Added pixelCNN output and more detail to README and moved all image files into resources folder + +commit b0ec278a16f0f16aaad55368bcb7fae39eefdd26 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Thu Oct 28 13:41:16 2021 +1000 + + Add files via upload + +commit d14d793b30c6ab095d125a28d778d7f7875e14b7 +Author: default-jamc +Date: Thu Oct 28 13:27:00 2021 +1000 + + Updated README, added small changes to reflect network changes and fixes + +commit 25479456c560c7651931a4f02b46f8158987fedc +Author: aryaman4152 +Date: Thu Oct 28 13:25:31 2021 +1000 + + Implemented DCGAN for image generation + +commit ee13b5625fc6293f82f49f80b2f070454a9d0d1a +Author: StopTheBoolean +Date: Thu Oct 28 13:21:10 2021 +1000 + + Implemented patch extractor and encoding from keras tutorial + +commit 9367a0098055053176fac634da5b5735b58e246c +Author: Anthony North +Date: Thu Oct 28 13:18:33 2021 +1000 + + remove redundant test function calls + +commit 6f06e7be4c74bf5b51bfe6ca577849c7a0a72739 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Thu Oct 28 13:17:47 2021 +1000 + + Add files via upload + + Upload images for section 3.2 + +commit c481492c4cf78d6024c835565fed8333c25f74ae +Author: Christian +Date: Thu Oct 28 13:11:05 2021 +1000 + + Update dataloader.py + + added a Learning Rate scheduler to training + +commit b1108020f596bfd370148d372c79a36eb9b1a88d +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Thu Oct 28 12:48:52 2021 +1000 + + Completed UNet explanation on README file + +commit c132066c0d691a1dcbb768479f58b03f3600fbc7 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Thu Oct 28 12:46:47 2021 +1000 + + fix some type + +commit 39b127d49c23edc71c0ca9d0f8b3f5cf8c4f0c76 +Author: Nifu +Date: Thu Oct 28 12:37:39 2021 +1000 + + Move variables to constants + +commit 4e2df4d250908be57473f1a64a3949d61a12663a +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Thu Oct 28 12:33:08 2021 +1000 + + Update README.md + + Added info about semantic segmentation + Started working on explaining the UNet architecture + +commit 14f193a3a0e0432e76630d304789b0366b90ee97 +Author: MujiDipto +Date: Thu Oct 28 12:26:15 2021 +1000 + + Revert "Merge branch 'topic-recognition' of https://github.com/MujiDipto/PatternFlow into topic-recognition" + + This reverts commit f957580f6fe618daf9e5e0dbe01ecf8a736c19f3, reversing + changes made to 32873637ecc6ec08dbb9fd57b9c9334e78fa7adc. + +commit f957580f6fe618daf9e5e0dbe01ecf8a736c19f3 +Merge: 32873637 5f848c03 +Author: MujiDipto +Date: Thu Oct 28 12:23:34 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/MujiDipto/PatternFlow into topic-recognition + +commit 32873637ecc6ec08dbb9fd57b9c9334e78fa7adc +Author: MujiDipto +Date: Thu Oct 28 12:23:31 2021 +1000 + + Update unet.png + + Added annotate image + +commit 5f848c03a273eb0220a3778b48822aa1459a5781 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Thu Oct 28 12:23:00 2021 +1000 + + Update README.md + +commit 78146d1d44cd928af8d390ff1b35e97c1b619bf5 +Author: d7a7 +Date: Thu Oct 28 12:16:55 2021 +1000 + + Started upon data loading functions. + + Have defined the keras data iamge generator parameters. + +commit 9372a5aca12bc297a00e5a152002c756c919aec9 +Author: Nifu +Date: Thu Oct 28 12:15:05 2021 +1000 + + Update driver set to include loading datasets + +commit 6b6e3259f229f11e56901de5f3091f455e5b2ec5 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Thu Oct 28 11:53:59 2021 +1000 + + fix some typo in readme + +commit 65caa1f602a22c3e0952b0377ca3d3d34e7dde87 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Thu Oct 28 11:52:35 2021 +1000 + + Update README.md + +commit 27bdcf111163fe84d075c9f91db7a1191cfbc88a +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Thu Oct 28 11:51:54 2021 +1000 + + Complete the conclusion + +commit 635c687e4ed41a4cc6bd55ddaa88441e2f3a1c6f +Author: Joshua Knowles +Date: Thu Oct 28 11:46:58 2021 +1000 + + Add Sequence for lazy loading + +commit ed029fd1fcb96a9cfa3b732be57ce9b03ef7c371 +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Thu Oct 28 11:45:01 2021 +1000 + + Started adding VQ, fixed some shape issues after running for first time + +commit ff4ee7f69984350da9eaa2e213adc45fe3a68ac5 +Author: Joshua Knowles +Date: Thu Oct 28 11:42:49 2021 +1000 + + Move data preprocessing functions to seperate module + +commit 12e5150d962155f55b4aff74fe96caa4ea5c63e5 +Author: Christian +Date: Thu Oct 28 11:40:51 2021 +1000 + + Update dataloader.py + + -Final working data loader + +commit eb9cd87e4e3a269c133d00d06cd46ac6f705b6c8 +Author: Christian +Date: Thu Oct 28 11:39:56 2021 +1000 + + Update data_splitter.py + + -Fixed data splitting issue not properly getting correct image and mask shape + -added functions to flip data horizontal and vertical + +commit 0ea268cf3b9b1c4b6364d521d5680c8b4bba07f0 +Author: Joshua Knowles +Date: Thu Oct 28 11:35:10 2021 +1000 + + Add 3D UNet model and dice coefficient + +commit 372d16f275c4e817db32ae0b572ddde46ce70975 +Author: Korbin Daly +Date: Thu Oct 28 11:35:07 2021 +1000 + + Added more comments to make structure clearer and changed some name of variables so the model is easier to follow + +commit e442021a90506d2edddb2ba5db0e0f611ef83885 +Author: Lee Jian Yang +Date: Thu Oct 28 11:34:40 2021 +1000 + + added data preprocessing file + +commit ce5e6b21cf5880be6b83ce1177bd5fef8f7703d0 +Author: Joshua Knowles +Date: Thu Oct 28 11:29:15 2021 +1000 + + Comment preprocessing functions + +commit 8696bfcde8efd652f72753234c7666921489cc36 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Thu Oct 28 11:28:28 2021 +1000 + + Add some images of 20k iterations + +commit 017ec644dc3a58950e70cf89049d06d5a1734f26 +Author: 周脆脆 +Date: Thu Oct 28 11:18:14 2021 +1000 + + add some comments for the model of GraphConvolution in s4571084-gcn.py + +commit ccfaf05c3abab8ce6acd8b540a3255479ab530cd +Author: Rick W +Date: Thu Oct 28 11:14:24 2021 +1000 + + MRISequence determines size by number of rotations + +commit fc6e40b5e305ce94fea644db9f7345b1ec8adb34 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Thu Oct 28 11:13:28 2021 +1000 + + writing Implementation + +commit f1b4ea83e7101fb2fbc66ed7eaa6956326bf786c +Author: 周脆脆 +Date: Thu Oct 28 11:11:08 2021 +1000 + + add a class contains two GraphConvolutions in s4571084-gcn.py + +commit 30ba50927b412c601b80d0227a504859bf3f3e87 +Author: Rick W +Date: Thu Oct 28 11:04:51 2021 +1000 + + added rotation data augmentation and use dice as loss + +commit 3c8d52e6b32fe56e52d4dc4d2c43f671ea3416d4 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Thu Oct 28 11:01:42 2021 +1000 + + Update README.md + +commit da5880091f9ff99441302cb0e230bf232e5a4dd7 +Author: StopTheBoolean +Date: Thu Oct 28 10:53:39 2021 +1000 + + Add transformer module method + +commit 77c53b9808d794913f26817cc960fd7e8a11462e +Author: StopTheBoolean +Date: Thu Oct 28 10:42:20 2021 +1000 + + Start work on model - add methods for creating dense layers and cross attention module + +commit b80cbdd9efd2905dbfed3cb6f4612d6e9648cf53 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Thu Oct 28 10:39:54 2021 +1000 + + writing how to use generate_AKOA.py + +commit cdcc21623ee34e9e5637d8d8b5639fde111ad416 +Author: Zhuoxiao Chen +Date: Thu Oct 28 10:27:05 2021 +1000 + + Update the parameters information in generate_AKOA.py + +commit 2698a2dd3ed07a744c83c85d4af4eca1233ba12e +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Thu Oct 28 10:26:37 2021 +1000 + + Started model by making encoder and decoder + +commit 603322ff23b58cbc8795cb313d81a3cb2d51647a +Author: 周脆脆 +Date: Thu Oct 28 10:18:25 2021 +1000 + + add function GraphConvolution (define a model of graph convolution) in s4571084-gcn.py + +commit 321bd57368a631bc304f8c5914ae45109582473c +Author: Keith Dao +Date: Thu Oct 28 10:06:51 2021 +1000 + + Updated reference list. + +commit a234c1d85923ab5cad1b483ae82a1600663d3d4d +Author: Mallika Mukherji +Date: Thu Oct 28 05:42:33 2021 +1000 + + Changed figure plot size for visualisation of data. + +commit 0d5764974c94095247e8a22213b741bc7d750b84 +Author: Mallika Mukherji +Date: Thu Oct 28 05:37:43 2021 +1000 + + Downsampled images to 80x80 to handle memory issues. + Changed input dimensions in VQVAE model. + +commit 7e73e9a04a3b3dda94fcdeec245f5c9a899aae34 +Author: Lalith +Date: Thu Oct 28 00:52:54 2021 +0530 + + Added Citation. + +commit 1369b78d72a64dbd507996878347266aebac8a13 +Author: Lalith +Date: Thu Oct 28 00:50:39 2021 +0530 + + Added Readme file. + +commit 0fb44961426f56ac8aaebdd2a633d154c04a3e8e +Author: Lalith +Date: Thu Oct 28 00:49:10 2021 +0530 + + Added resources required for Readme file. + +commit b6d4f6c150b866ef2b2daf6366bb1bc11cc3fe13 +Author: Lalith +Date: Thu Oct 28 00:47:04 2021 +0530 + + Added folder containing predictions of 12 test images. + +commit 68992656bc4df0b5a4cf15cd05680161ffba4fcc +Author: Lalith +Date: Thu Oct 28 00:44:56 2021 +0530 + + Added YOLOv3 custom config file. + +commit 6a224c99db862f9efbac2eade17dc3fdfa50acfe +Author: Lalith +Date: Thu Oct 28 00:43:04 2021 +0530 + + Created obj.names containing one class label. + +commit b5f39d50031d3c06d46957013c392a90af49601a +Author: Lalith +Date: Thu Oct 28 00:42:03 2021 +0530 + + Created obj.data containing important file paths. + +commit 1cfc842804670655ec9382e18a1e38ffc2051dbb +Author: Lalith +Date: Thu Oct 28 00:36:20 2021 +0530 + + Added Python helper function that helps display images. + +commit 60639971cf86af83e8fd9111c9e3f9ebd8837f3f +Author: Lalith +Date: Thu Oct 28 00:33:53 2021 +0530 + + Added Python script that writes train and test file paths to text files. + +commit 74ee8c33e2a464ac782864bfc9c0c90a6def03e0 +Author: Lalith +Date: Thu Oct 28 00:30:55 2021 +0530 + + Added Python Driver script to import and annotate the ISICs dataset. + +commit 21d9cd11b559f61a0e146e554d3e3e58b9a47441 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Thu Oct 28 03:12:28 2021 +1000 + + Add files via upload + +commit 3851c112c5113df5c3c5200229bc1347d088d9da +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Thu Oct 28 03:11:50 2021 +1000 + + Delete improvedUNet.ipynb + +commit 8691ec34f22504e0d774705d327abf0f75c1a845 +Author: tomdx +Date: Thu Oct 28 01:46:07 2021 +1000 + + Improve structured similarity results - 50% + +commit 02922f026815758172fc223a509337d8e9095a0b +Author: Tompnyx +Date: Thu Oct 28 01:37:25 2021 +1000 + + Implemented Model running, and model will successfully try and fit. Changed return of improved_unet in model.py so that it returns a model and not an input/output. Implemented rudimentary callback. Added a plot of the model, which is saved in the local directory of this project as model.png. + +commit e21361d2c01f96b2db2547e0d9b7918cea6eebe4 +Author: Keith Dao +Date: Thu Oct 28 01:13:08 2021 +1000 + + Fixed sequential loss graphs overwriting the initial graph. + +commit 97e65cfcb8debbb9bc107d05e0434df96aa921dc +Author: Erin14 +Date: Wed Oct 27 22:46:19 2021 +0800 + + finalized model architecture, a template of README.md + +commit 77ff16cb37da3d65aad029bd80f22c8ec15d91ae +Author: Keith Dao +Date: Thu Oct 28 00:20:35 2021 +1000 + + Removed unnecessary docstrings. + +commit 71e2206fdfcd074e8fb984af9f664bc3a06a0364 +Author: Keith Dao +Date: Thu Oct 28 00:19:52 2021 +1000 + + Added reference to StyleGAN paper. + +commit d0f002aa9fd04584461f8b731301a02864cf0019 +Author: Keith Dao +Date: Thu Oct 28 00:02:50 2021 +1000 + + Added description of the general StyleGAN architecture. + +commit 3049ecc819d66d3237bbd49703af853e3c8e02d0 +Author: Tompnyx +Date: Wed Oct 27 23:33:41 2021 +1000 + + Changed certain parameters of the model and implemented correct element-wise sums and segmentation layers so that the model now works and compiles properly. Renamed variables in the model so that they represent which layer they are present on, rather than what iteration they are present on. + +commit b053d7abce2bd3189adc27bd75587bf8914cf029 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Wed Oct 27 23:26:02 2021 +1000 + + Update README.md + + Added Unet model info and image + +commit 96307cb51e3243a1285947796d35fcc2355db2ce +Author: MujiDipto +Date: Wed Oct 27 23:23:23 2021 +1000 + + Added unet architecture diagram + +commit 627787fa2b0d78dca5374c67325b0fcf485e05e5 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Wed Oct 27 23:20:53 2021 +1000 + + Update README.md + + Added UNet info + +commit 31dc1b5cdf5ba5ae0328a35d701bfba11aec9c59 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Wed Oct 27 23:14:11 2021 +1000 + + Update README.md + +commit b2329c6a0a2d10b9b372f3efc314e0a011a9359c +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Wed Oct 27 23:11:15 2021 +1000 + + Update README.md + +commit 3df7207dfeb181e0c07eff773ff69ef4b8e66f58 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Wed Oct 27 23:06:07 2021 +1000 + + Update README.md + +commit 0d9d8aca0a0272dec90f7897447287e0ec7e2a75 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Wed Oct 27 23:05:48 2021 +1000 + + Update README.md + +commit 523941d57be24899a622f01001f69780a7d6810f +Author: Zhuoxiao Chen +Date: Wed Oct 27 23:04:23 2021 +1000 + + A bug fixed when generating the AKOA image; remove generater images + +commit 07fb0f494e1ae43d755e90948cd04017320a9605 +Merge: 454867df c5d4839e +Author: Zhuoxiao Chen +Date: Wed Oct 27 23:03:32 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/zhuoxiao-chen/PatternFlow into topic-recognition + +commit c857cca931ada3ec246e4d55405e7d8ad88e7816 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Wed Oct 27 23:03:16 2021 +1000 + + Update README.md + +commit 7e2a72b53194e87017f3fc0c2ca5d8c3d3cba2b6 +Author: Keith Dao +Date: Wed Oct 27 23:03:02 2021 +1000 + + Added note to hyperparameter choices. + +commit 454867dff6e1d1837f0eead0748b3efccf5cf0de +Author: Zhuoxiao Chen +Date: Wed Oct 27 23:02:47 2021 +1000 + + A bug fixed when generating the AKOA image + +commit 8ad50d6bf7639cfe45ebeff084b36102605f670b +Author: Keith Dao +Date: Wed Oct 27 23:02:35 2021 +1000 + + Added recommnded environment. + +commit a64e1d98673231196966bec56808de02975f9cdd +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Wed Oct 27 23:01:41 2021 +1000 + + Update README.md + +commit 75ca585be6acc852e7739fc4a9e007780668e850 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Wed Oct 27 22:56:53 2021 +1000 + + Add files via upload + +commit d030d418af9c7dd1b0a76a6a554d14dba6d17d1d +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Wed Oct 27 22:55:02 2021 +1000 + + Delete improvedUNet.ipynb + +commit 6641ca9f049b449da3910c2accc162c20a9a3d7f +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Wed Oct 27 22:54:04 2021 +1000 + + Add files via upload + +commit 06a2beec098afadef6b3466f55d5353acdc2c2fa +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Wed Oct 27 22:53:34 2021 +1000 + + Images + +commit 9cb85be7562b350de609062e1ccaa1d134649ff1 +Author: Tannishpage +Date: Wed Oct 27 22:49:26 2021 +1000 + + rewrote the create_generator function in data_preprocess.py, using the built-in keras functions to load images weren't working. Now create_generator will load all the image files and their groundtruths using opencv as it's faster. + Now main.py (The driver file) loads data, splits it to train, test, split, creates the model and trains it. Then it plots the training metrics. + +commit c5d4839e08f2416d8269293c2f7ba6e34341883c +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Wed Oct 27 22:37:31 2021 +1000 + + Update README.md + +commit d34081ccda672405770013a0f001eb62120eefec +Author: Zhuoxiao Chen +Date: Wed Oct 27 22:35:36 2021 +1000 + + add more parameter information + +commit c9c3bed2d25447a643bbc8848f377415eaafc932 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Wed Oct 27 22:33:59 2021 +1000 + + writing the instruction for pre-processing + +commit d256331c1612349b3cc399dc9dd0664b55fe4ead +Author: Zhuoxiao Chen +Date: Wed Oct 27 22:18:28 2021 +1000 + + update data pre-process script. + +commit e60e474d90062d8c6f7dfc7657be57605aa23639 +Author: tomdx +Date: Wed Oct 27 22:17:12 2021 +1000 + + Fix issue with structural similarity calculation - getting around 45% + Add PixelCNN file + +commit b558024ed4c12e9b35784f7002904be9e8b9319d +Author: Pritish Roy +Date: Wed Oct 27 22:14:15 2021 +1000 + + updated space in between headers in readme file + +commit a9aeba40c1505831a176236c12306bf48f7a1b62 +Author: Zhuoxiao Chen +Date: Wed Oct 27 22:08:07 2021 +1000 + + update data pre-process file for image_resize_multiple function. + +commit addb3741ca9f08f8f93011da57988f6bdd9d79e8 +Author: Zhuoxiao Chen +Date: Wed Oct 27 22:02:13 2021 +1000 + + update data pre-process file in main function and improve the accepted parameters. + +commit 0509655037852776fd6f248d4eb53d60626f410c +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Wed Oct 27 22:01:38 2021 +1000 + + Update README.md + + Keep table of contents dropdown closed + Cleanup readme + +commit 062e7acab4eb04bc7fc1bc3fd242b7882cb9ef24 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Wed Oct 27 21:59:05 2021 +1000 + + Update README.md + + Added table of contents + +commit d0ad68c07ec24854b5cd54e226c65420cb3c17a7 +Author: aryaman4152 +Date: Wed Oct 27 21:56:11 2021 +1000 + + Added codeindices visualization + +commit 1f155209c4e8e68797c47031b4beb092e36797d9 +Author: joe86726 +Date: Wed Oct 27 11:54:32 2021 +0000 + + modified trainer and addeed new make_gif function and comments + +commit f03a5200182689fe1cdefd05f955f8a13c2c018d +Author: tomdx +Date: Wed Oct 27 21:44:59 2021 +1000 + + Implement structural similarity calculation with reconstructed images + Fix typos and bugs in the model + Add image load limiter for quicker testing + +commit a1dbe7705e7131746dea6963c0f05a932c8e73f8 +Author: Shiyan Tang +Date: Wed Oct 27 21:43:52 2021 +1000 + + Implement the pixelcnn network and use the trained model to generate images based on the features learnt. + +commit 2a0f7536819666c2b901f970cad19b7adf90e026 +Author: Shiyan Tang +Date: Wed Oct 27 21:42:06 2021 +1000 + + Modify comment for function in pixelcnn.py + +commit 98a7cf59522ec45c1ce8b1c58da261bd2bf9646f +Author: JoeHolownia +Date: Wed Oct 27 21:41:54 2021 +1000 + + Modified data augmentation pipeline + +commit 838b0c80b8b062980684cbc5702f50ed50ff176e +Author: Shiyan Tang +Date: Wed Oct 27 21:37:27 2021 +1000 + + Fix a bug in the function process_data() in dataset.py. + +commit d972a98d477256cd27a9c231840cb70eff699d0b +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Wed Oct 27 21:33:29 2021 +1000 + + Writing the usage of train function + +commit d27a40491a979ee25bff46b112f49904684acfe0 +Author: Korbin Daly +Date: Wed Oct 27 21:30:39 2021 +1000 + + Updated imp unet filled in mission functions, still has errors + +commit 657334d2038425bf845d4dc002d58d494d78c316 +Author: Zhuoxiao Chen +Date: Wed Oct 27 21:28:51 2021 +1000 + + Finally complete the train.py file with full comments, and unused libraries are removed. + +commit ccf834f5ec74715ec4545dc8245682e62898893e +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Wed Oct 27 21:24:38 2021 +1000 + + Update README.md + + Added links to data and model + Added more sections + +commit ef4879266ea5c9f0bc578cce6d971844f7eb1b62 +Author: Zhuoxiao Chen +Date: Wed Oct 27 21:22:46 2021 +1000 + + update the parameter information for training. + +commit e30d577c5a5eb07f0aee6d9bd37da968549898ac +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Wed Oct 27 21:14:13 2021 +1000 + + Update README.md + + Added info about the data set + Added references + +commit 6a69a044c2f69f7cc4c003e31705ed37e6ef797e +Author: Zhuoxiao Chen +Date: Wed Oct 27 20:59:54 2021 +1000 + + A bug was found, fixed from previous checkpoint + +commit b0a198cee3bff74b0360f08dce90ebcc8c7f4fa2 +Author: Keith Dao +Date: Wed Oct 27 20:48:09 2021 +1000 + + Added prints to describe the current stage of the script. + +commit 1f982ed6c5f7f97e9049a9723ecbf79a7f803ca3 +Author: Keith Dao +Date: Wed Oct 27 20:41:57 2021 +1000 + + Added some notes to the training results section. + +commit d92d382a67da38f09da580f594561369b4c9e3bb +Author: Nifu +Date: Wed Oct 27 20:40:48 2021 +1000 + + Move compile and fit models methods to model.py + +commit 80a6b8a83f0d504a625eed28ebf1c8ac1b579493 +Author: Pritish Roy +Date: Wed Oct 27 20:38:33 2021 +1000 + + more comments added to code + +commit 2d38d62da634d35e7cf23a202ad3e00bc6d7b8fc +Author: Nifu +Date: Wed Oct 27 20:05:33 2021 +1000 + + Update encoder and decoder modules + +commit a28e8f61083f183320858c465c0e402913436ccd +Author: Keith Dao +Date: Wed Oct 27 19:27:23 2021 +1000 + + Using an online service to prevent the need to save the gif in the repo due to its size. + +commit 3b69a358238534b1561e2fffa4060dac3fc52906 +Author: Keith Dao +Date: Wed Oct 27 19:12:44 2021 +1000 + + Added final results with pictures and graphs. + +commit 05b3bccbaa575486518a91d206297fde97c0613b +Author: Tony +Date: Wed Oct 27 19:28:38 2021 +1000 + + Removed 2nd BN layer from each Conv set. Ran without crashing. first filter =8. + +commit 669b1bedd1a166deb48d5f25f956d9c6b2fc9ed3 +Author: d7a7 +Date: Wed Oct 27 19:27:44 2021 +1000 + + Completed standard UNet Model. + + The model program has a standard UNet model created, it currently has no + data processing capabilities and none of the changes that are in the + improved UNet. + + I will now be working on data processing capabilities for the ISIC + dataset, then will attempt a standard UNet segmentation of that. + +commit 24a1753168b9f3009fd9de92206dcb342629bf09 +Author: tomdx +Date: Wed Oct 27 19:12:40 2021 +1000 + + Add function to train VQVae with OASIS dataset + +commit e257d8ce7aaf5789ad60755923885282db45d6bd +Author: tomdx +Date: Wed Oct 27 19:01:25 2021 +1000 + + Modify VQVae to use custom training loop, and track metrics + +commit 0d2d60e47b307023feaa2f490a1380abae56f473 +Author: Keith Dao +Date: Wed Oct 27 19:01:00 2021 +1000 + + Changed generator to take a new latent vector and noise image for each resolution block. + +commit afda4ae4c972f7354c8c3393ff1840130e1789ed +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Wed Oct 27 18:44:22 2021 +1000 + + Added a sequence subclass to load OASIS brain images from disk + +commit 346d362234cf98b725a5539316ce4bfeb80529e0 +Author: Andrew +Date: Wed Oct 27 18:40:59 2021 +1000 + + fixed dice coefficent function + +commit fa17535ecff46b6319d2afdb24ab9483950f6746 +Author: Andrew +Date: Wed Oct 27 18:39:41 2021 +1000 + + added dice coefficent function + +commit 5e141076d4cb54e5b1984c25ad705d2f7136894f +Author: aryaman4152 +Date: Wed Oct 27 18:26:19 2021 +1000 + + Added driver.py with vqvae reconstructions. Fixed imports in models + +commit eeded478ad9396b00b575263cefbea43e24ddad4 +Author: Andrew +Date: Wed Oct 27 18:12:55 2021 +1000 + + main function added, data augmentation function added + +commit c52e2b273d3b4c941b1a63a363d6cc8aa1802d29 +Author: Yash Talekar +Date: Wed Oct 27 18:02:45 2021 +1000 + + finished batching the dataset + +commit 7b1fe9b53b26f80908b80aef59d6569fffda3ea2 +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Wed Oct 27 17:59:14 2021 +1000 + + cleaned up some commented out code + +commit 411416c3120a26bea5df65153475c4c0fd4e1f7a +Author: SteveInUQ +Date: Wed Oct 27 15:49:44 2021 +0800 + + Add commend for data split class + +commit 3934433eba9477e48bbc2168a60df2f30fdd4177 +Author: Lee Jian Yang +Date: Wed Oct 27 17:33:36 2021 +1000 + + creation of README file + +commit 5f20dbd99c0e0fbd7868cac2dcef5936761b936d +Author: Lee Jian Yang +Date: Wed Oct 27 17:32:57 2021 +1000 + + first draft of architecture + +commit 641bbb7de5280f7c8fb5d363b0ff2e4750ace3d7 +Author: Joshua Knowles +Date: Wed Oct 27 17:32:45 2021 +1000 + + Add data preprocessing methods + +commit 9657d2c1c365d240918c627a68e4405d5ff0a70a +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Wed Oct 27 17:25:44 2021 +1000 + + converted the jupyter notebook file into the driver, model, functions, and ModConv2D python files. And tested the new files to make sure they work + +commit e0acefc27e0231dd22b7d264f9f991373259422f +Author: Anthony North +Date: Wed Oct 27 17:24:53 2021 +1000 + + Document model, layers, utils and experiment / driver. + +commit 1b22b8e42c7226c7a565c89e95143fbfe710baf2 +Author: 周脆脆 +Date: Wed Oct 27 17:21:53 2021 +1000 + + add some comments for load data model of s4571084-gcn.py + +commit ea07649cad69732ccf723eb10c05ba5f016f484e +Author: Cherian John +Date: Wed Oct 27 17:17:34 2021 +1000 + + The project is now fully functional, users can now fully train and predict images with the model + +commit e969c0f96d486470878a039adcc29899a17dd7ab +Author: 周脆脆 +Date: Wed Oct 27 17:09:46 2021 +1000 + + finish load data model of gcn.py + +commit 7bc07f4da03addebc9da830bfa5c9be988e1253f +Author: Zhien Zhang +Date: Wed Oct 27 16:36:44 2021 +1000 + + Revert back to cross-entropy loss due to the significant drop in the quality of generated images. + +commit 950c95d6743fc39dde58dd15a4b92ab2e51c72c4 +Author: Nifu +Date: Wed Oct 27 16:35:20 2021 +1000 + + Rename train to metrics + +commit 6b9a95658e7d93d49d5734dc92f29173744b14ea +Author: Anthony North +Date: Wed Oct 27 16:30:26 2021 +1000 + + bugfix: max shuffle buffer size logic bomb + rearrange augmentations + +commit c7a27d1586e787c3932fd15e5d43a938e8f50ade +Author: Nifu +Date: Wed Oct 27 16:28:18 2021 +1000 + + Create datasets + +commit 08ed74e7b7f70e1cdbab55504062510a6fdc48e9 +Author: Anthony North +Date: Wed Oct 27 16:22:27 2021 +1000 + + test position encoding, refactor for clarity + +commit 27b762c79a179cbe52db7abe48e2083ea9d8bf6f +Author: Tannishpage +Date: Wed Oct 27 16:19:13 2021 +1000 + + changed how I load data, now we iterate over the files and load them as numpy arrays. Data is loading, and model is training. Everything runs. Need to perform some tests and print out graphs + +commit 79c509a1ead0ebc5feaa09bd05a1b57014f20b6c +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 27 14:11:57 2021 +0800 + + File management + + Separate the model from the running file and rename it to model.py and driver.py + +commit 5e42535c52d885cf30e348884c2e1520ef71345f +Author: RobEldo <43310214+RobEldo@users.noreply.github.com> +Date: Wed Oct 27 16:09:53 2021 +1000 + + Add template README file to the VQVAE folder + +commit df4cedfe42658d050615f0fa316ea446e969edf6 +Author: lion-software +Date: Wed Oct 27 15:53:13 2021 +1000 + + Update required pytorch version + +commit dffdcd6e4dfa5d1e8c0353ef7e1a9641ed66b2b2 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 27 13:43:23 2021 +0800 + + Merge into diver.py and model.py + +commit fde83ba4ca0843808873f69314ac2fce73b45783 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 27 13:42:56 2021 +0800 + + Merge into diver.py + +commit bc24948c2a76dcb6eaa989980115247be1e9bbc5 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 27 13:42:06 2021 +0800 + + Add loading to diver.py + +commit 449058f236f62c4901d5b39cf625cbe121d17121 +Author: Andrew +Date: Wed Oct 27 15:34:00 2021 +1000 + + files created for the network + +commit 081dec648060d49bb4ebc037a4289757cae937d4 +Author: Nifu +Date: Wed Oct 27 15:32:14 2021 +1000 + + Make funtions private + +commit 420fb646601bdb9830e65ac1b0247d078c85bf0d +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Wed Oct 27 15:25:22 2021 +1000 + + Create README.md + +commit 038c5dd84df3971b85699b7f6ec8a81839bd2c54 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Wed Oct 27 15:24:28 2021 +1000 + + Delete S46070337 + +commit 142ed8856c1cde458427be4ecd46b69a3ebe2886 +Author: Tony +Date: Wed Oct 27 15:19:06 2021 +1000 + + Model trains on training data only, 1 filter per conv. + +commit 149845478ac04bea87b1e96a46587713674f7db5 +Author: hyb19951213 <93240253+hyb19951213@users.noreply.github.com> +Date: Wed Oct 27 15:17:59 2021 +1000 + + Create S46070337 + +commit 3466648baf43b4011bc9d798b7b960c4817560de +Author: Joshua Knowles +Date: Wed Oct 27 15:11:09 2021 +1000 + + Initial commit + +commit 3863adc42f9a2e95b91b57f7fa7cc4b57569377a +Author: Edward_Guilfoyle +Date: Wed Oct 27 15:10:08 2021 +1000 + + Continued working... + +commit c7d1b8844f1e9b670fcee86cbd5b409790fa632e +Author: Zhuoxiao Chen +Date: Wed Oct 27 14:57:57 2021 +1000 + + organise the parameters for better usage + +commit 9e58eb549b57b707eeaae5f4ba650cfd08f514f8 +Author: Tannishpage +Date: Wed Oct 27 14:52:56 2021 +1000 + + Removed unwanted imports + +commit 54deb69c40234cd95ac0ba2ca19f5d1e6735d211 +Author: Tannishpage +Date: Wed Oct 27 14:51:12 2021 +1000 + + Added model definition and DCS function + +commit aeb004ba547f3384a01cf02df7b451931cb91d5d +Author: d7a7 +Date: Wed Oct 27 14:48:22 2021 +1000 + + Test + +commit 42b77efe1aa340c01fc5d71126ed48943b5c595c +Author: Nifu +Date: Wed Oct 27 14:26:41 2021 +1000 + + Load feature and label images + +commit ee3650816c7ce62b7013e681cbc3aacf04026ca7 +Author: Edward_Guilfoyle +Date: Wed Oct 27 14:26:21 2021 +1000 + + Continued tweaking... + +commit f27fccb4a88ffab4d14c0abb71fd35b16efb1f27 +Author: Zhuoxiao Chen +Date: Wed Oct 27 14:24:58 2021 +1000 + + complete model explanation in the most important train() function + +commit 24f46322a80009a822c740109f6fca3838553caa +Author: Edward_Guilfoyle +Date: Wed Oct 27 14:23:51 2021 +1000 + + Continue tweaking images + +commit 7e5bc273ff8dc66981a7fb4044f1e6c48e417e69 +Author: Edward_Guilfoyle +Date: Wed Oct 27 14:22:48 2021 +1000 + + Tweaking images + +commit 378a5ecd6b6376d53107fd231e5c3114a9ab7273 +Author: Edward_Guilfoyle +Date: Wed Oct 27 14:20:34 2021 +1000 + + Centered images + +commit 054535a0756241a42c43a3858c77675023507536 +Author: Edward_Guilfoyle +Date: Wed Oct 27 14:17:57 2021 +1000 + + Added more images + +commit a6b317de5e45aa29a1df36577e7ba78bd2289c16 +Author: Edward_Guilfoyle +Date: Wed Oct 27 14:17:05 2021 +1000 + + Adjusted image sizes + +commit 1e68faa4d61e92c385c7887b4a7c00e6950f7bba +Author: Edward_Guilfoyle +Date: Wed Oct 27 14:15:53 2021 +1000 + + Large commit. Continued working on readme and added more functions ot the model + +commit 9742c0cd74997408b932a7bfbb6a2923918c0e14 +Author: Zhuoxiao Chen +Date: Wed Oct 27 13:46:12 2021 +1000 + + make some explanation to the saving model section of train file + +commit 6395f0996cc57468ed4b4fcbea8f111277285b12 +Author: Zhuoxiao Chen +Date: Wed Oct 27 13:33:54 2021 +1000 + + some good comments added to the train file + +commit a94b1f9a202312bc849a6c73c2831854966c8877 +Author: Chao-Chun Wu <52982031+white-segfault@users.noreply.github.com> +Date: Wed Oct 27 11:29:34 2021 +0800 + + Pre-processed the data into training, test and validation set respectively for future model training and evaluation + 80% of the data is used for training, 10% for test set and 10% for validation set. + +commit 2fe2d0738ebbf56a96ea5b69a2e3a3fd00757b31 +Author: Anthony North +Date: Wed Oct 27 13:25:54 2021 +1000 + + add preprocessing tests + +commit 905d63e0f22ba310fe99d8ee1ba33320a804fd07 +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Wed Oct 27 13:08:24 2021 +1000 + + Kept iterating on model, changed learning rate and optimizer. + +commit 21693c13975cb90425a4e7ebae8f41c8ac870d0f +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Wed Oct 27 12:44:50 2021 +1000 + + Fixed OOM Error for PixelCNN by downsampling/upsampling thrice in the VQ-VAE instead of only twice. PixelCNN now successfully generates images reasonably resembling human brains. + +commit 36db0482425897405f0d6d8c94268385d4ffecbb +Author: aryaman4152 +Date: Wed Oct 27 12:37:20 2021 +1000 + + Added vqvar model + +commit ecbc9f5010a8bef330ec572721333a66f2857a1b +Author: Lee Jian Yang +Date: Wed Oct 27 12:25:14 2021 +1000 + + constructing of architecture + +commit 7d0a184a761277033449c1fed13a779e76bc5d7f +Author: Tannishpage +Date: Wed Oct 27 12:22:30 2021 +1000 + + data_preprocess.py now can return the generators for the data + +commit 5172e626f5985e6f0e1646aa5a0434a54b4e0278 +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Wed Oct 27 12:10:53 2021 +1000 + + Improved model by adding Dense layer and a DropoutLayer, now reaches 50% accuracy in only about 160 epochs where it previously took almost 1000. + +commit 6ed9cfed8f7f38f3ffde5c2c5f33458322d8f84f +Author: yousifpatti +Date: Wed Oct 27 12:09:53 2021 +1000 + + Fixed big loss issue and plots + + I finally fixed the issue of the losses being very large (thanks to Siyu) by removing the division by the data variance. The data variance appeared to be very small and causing the loss to maximize. + I have added 10 plot samples instead of just 1 in order to add them for the readme. + +commit e0ba63e017ee9fcedfefdfd99080e1f5670706df +Author: lion-software +Date: Wed Oct 27 12:08:34 2021 +1000 + + Some documentation fixes + +commit b0fb421047d4f60b56ecbb6fd2222ceffb411044 +Author: aryaman4152 +Date: Wed Oct 27 12:04:28 2021 +1000 + + Added function to convert convert code indices to quantized + +commit 4363e055a9dc8d8802fd8a1ecbfe26c5e6f8fedd +Author: lion-software +Date: Wed Oct 27 12:02:15 2021 +1000 + + References + +commit ed6417d2ec6f5cb7b9063ef1d8a02a087a113a3c +Author: MujiDipto +Date: Wed Oct 27 11:58:21 2021 +1000 + + Started working on creating improved unet model in model.py + +commit b782c8e32f69371671b019d61b667b41cb474391 +Author: lion-software +Date: Wed Oct 27 11:55:25 2021 +1000 + + Comments and README updates + +commit 06100b08da5ae36f051f5356daa9bebb348c05a9 +Author: des-gan09 +Date: Wed Oct 27 11:49:38 2021 +1000 + + add Unet model + +commit 3bce3e3c1d5ceb6a929206a1c085d1681e624b9b +Author: Tompnyx +Date: Wed Oct 27 11:48:39 2021 +1000 + + Added train, validation, and test splits for the data, and implemented model building and compiling + +commit d4068252804f79f5579d9e0359d6e586e3d428cc +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 11:31:36 2021 +1000 + + Proof read + +commit cf09286f0d519cd66eb37fde927cb4f337110f7e +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 11:28:39 2021 +1000 + + Changed some headers + +commit 89dcaf7f17ee7241c2b945ab56a083707ccca971 +Author: Keith Dao +Date: Wed Oct 27 11:28:25 2021 +1000 + + Restructed discriminator to have the resizing layer at the end of the block. + +commit 2bb7cbf36b861c2281e84c8ed18f98068a239bd5 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 11:28:09 2021 +1000 + + Finished README + + Added high level description of algorithm + +commit 8900bf7ea857bcf61c4dd5c343fd620f00be5c96 +Author: leecwj <37468566+leecwj@users.noreply.github.com> +Date: Wed Oct 27 11:19:49 2021 +1000 + + plotting results and adjusting model + +commit f6675e6182ad230e0e946c64d1ad636c1bde2b33 +Author: Zhuoxiao Chen +Date: Wed Oct 27 11:14:15 2021 +1000 + + some good comments added to the train file + +commit 798809a157d953d191a5eab5ef5636fb2bc9be50 +Author: Edward_Guilfoyle +Date: Wed Oct 27 11:10:50 2021 +1000 + + Added images + +commit 25b16330bc15d71065720bf7aaf108ed3a27fed1 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 11:08:12 2021 +1000 + + Added dependencies + +commit 8a4ef166ee465de0759a06bdec4008a4e220e43d +Author: Tony +Date: Wed Oct 27 11:02:17 2021 +1000 + + Corrected goliath directory pointers. Model compiles, summary and plot_model ok on G. + +commit dc69f4ff9d6e3959465d935399e3b0451c1dc522 +Author: Edward_Guilfoyle +Date: Wed Oct 27 11:02:09 2021 +1000 + + Added some images + +commit c85b8b7734106a926f927abe5d8bd3647f7a308b +Author: Edward_Guilfoyle +Date: Wed Oct 27 10:58:38 2021 +1000 + + Started working on read.me + +commit e9f88585d1fb7ec027b5b19710d6cd526fba6c77 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 10:56:03 2021 +1000 + + training, testing and usage added + +commit 1dc634ce1f3b76345e545e47cb7fc95041ff27d0 +Author: Tannishpage +Date: Wed Oct 27 10:40:17 2021 +1000 + + Now data_preprocess.py can move files into a format that will allow using ImageDataGenerator from tensorflow to load images as generators + +commit dd69133c30a5de64a44dffea36882d293a0b6efc +Author: Zhuoxiao Chen +Date: Wed Oct 27 10:38:41 2021 +1000 + + some good comments added to the train file + +commit 4e1c96f6c3328dccac0d4420ac2b6a0b21b6f340 +Merge: cbdd671a 551691ec +Author: Pentaflouride +Date: Wed Oct 27 10:36:56 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/Pentaflouride/PatternFlow into topic-recognition + +commit cbdd671aed8e5c86b1a605080228acb8128bc7ba +Author: Pentaflouride +Date: Wed Oct 27 10:36:18 2021 +1000 + + traning and testing proof + +commit 551691eca8c5e78ad5bcc0eeb485587831e470b1 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 10:29:16 2021 +1000 + + TSNE image added + +commit 3fce77f3e0b08aec6e9924a65c84179e24d41c89 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 10:27:35 2021 +1000 + + image hopefully works now + +commit 8fb6cfc8e0ed9b06367d2432fd8873aa669a5f1d +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 10:25:32 2021 +1000 + + Update README.md + +commit 46b9e756b55845160bb37987304c138d6a082e98 +Merge: ea3dda0b e60894be +Author: Pentaflouride +Date: Wed Oct 27 10:23:57 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/Pentaflouride/PatternFlow into topic-recognition + +commit e98fecce8e21c1c76b6e3772a1192b3890c54741 +Author: Kristian Thomassen +Date: Wed Oct 27 10:23:31 2021 +1000 + + Tidy up driver.py slightly + +commit ea3dda0be3838c9bb38c9647209d342f3a323df4 +Author: Pentaflouride +Date: Wed Oct 27 10:22:54 2021 +1000 + + added the images of the graphs + +commit 038cd60ed42e8b153c9ff9aef25b18048f0af59a +Author: leecwj <37468566+leecwj@users.noreply.github.com> +Date: Wed Oct 27 10:21:49 2021 +1000 + + defined sorensen-dice loss function + +commit e60894be116384dbd88b699871f1b00758975f81 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 10:20:08 2021 +1000 + + train and val accuracy image + +commit d9f666bd902d6877f4e3f5ce6212438d78e6afa3 +Author: Edward_Guilfoyle +Date: Wed Oct 27 10:12:30 2021 +1000 + + Swapped driver file to be a notebook. Copied from my data-procressinf file and yolo_baby notebook. + +commit e25fd22530ac75da5e5749e2560bd195fb47d1d1 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 10:09:23 2021 +1000 + + formatting + +commit 775782496a3ae2e49f531cba01675b80d5bbe4c1 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 10:09:09 2021 +1000 + + Update README.md + +commit 70e6c57b0a052fb0069cc29f8a119434f9912ea9 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 10:00:16 2021 +1000 + + how it works added + +commit 367365ff6d1a36f51e094ae212602de40bb4bf95 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 09:41:57 2021 +1000 + + Update README.md + +commit ce9182e28f2a28edd8a4d7b08daf9cd904001c00 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 09:41:21 2021 +1000 + + newlines + +commit 4fd3981f434c167bf16b028e9e9693f8001d823b +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 09:40:05 2021 +1000 + + Update README.md + +commit c79e5c69658656431aa81fe54ca6d1301b381603 +Author: Tannishpage +Date: Wed Oct 27 09:37:25 2021 +1000 + + function processing_data_folder now returns test, val and test split. new function create_generators will be used to make tensorflow generators for train, val and test. + +commit e398f942ed36bf543566f25f6dda8cbb6e17a08d +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 09:37:22 2021 +1000 + + Added details about the problem + +commit ba5ee93a1fbf380ecddbac42822fd11b54a5100e +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Wed Oct 27 09:35:54 2021 +1000 + + Fixed bug and added normalization for the adjacency matrix. Model is now working and slowly improving in accuracy, up to 50%. + +commit 1d36c549a7e907a240f98909f487f0e557ebd008 +Author: uly6mlv +Date: Wed Oct 27 09:29:20 2021 +1000 + + Updated model.py + +commit 18c93afe2b39993195389464b70a32fa202fdc89 +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 09:23:06 2021 +1000 + + Finished introduction + +commit 2ff7933e43fb6f9ebf1c86a3dc795962f527e82a +Author: Kristian Thomassen +Date: Wed Oct 27 09:22:49 2021 +1000 + + Implement argument parsing to allow parameter customisation + +commit 5ff7acb03efaae778f374337aacf497ba979502f +Author: uly6mlv +Date: Wed Oct 27 09:10:35 2021 +1000 + + Added model.py, updated GCN_Bode_Classficication, updated figures in model-graphs + +commit 8b144fb9954c83ebfb4d07355ffa423a6f33f21f +Author: Pentaflouride <52057695+Pentaflouride@users.noreply.github.com> +Date: Wed Oct 27 09:08:47 2021 +1000 + + Testing readme + +commit e067bea8edee45160c0fa6440aa4f8e05c536f3d +Author: Alex Patapan +Date: Wed Oct 27 08:56:34 2021 +1000 + + More readme info + +commit 0f9c8115e72aee9b6575dd278b2e90de2ed32243 +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Wed Oct 27 08:31:48 2021 +1000 + + Renamed files appropriately. Still trying to bug fix the model, which does work with the mock-up data but not the real data yet. + +commit 9f8c6c5dccbd3554fba08d1a08be844480acbc27 +Author: Tannishpage +Date: Wed Oct 27 08:15:19 2021 +1000 + + data_preprocess.py can now split the data into train val and test + +commit 6bf56f212d13bb6ca91930a3d8d0c44a599526c2 +Author: Tony +Date: Wed Oct 27 07:33:15 2021 +1000 + + Began readme.md file, driver ok to plot_model. + +commit 77dbf4833dd501a0b69e766459db2dc976cfbc2e +Author: Chegne Eu Joe +Date: Wed Oct 27 04:21:04 2021 +0800 + + Added layer descriptions of perceiver model, and implemented prenorm wrapper + +commit a2e702a506fb570e1cb4940c52d266cc99d4d15f +Author: Flashfooox <71965571+Flashfooox@users.noreply.github.com> +Date: Wed Oct 27 06:17:16 2021 +1000 + + Update tsne.py + + comment show_acc_and_loss to make sure tsne and show_acc_and_loss won't work at the same time. + +commit 181d65cad74407bc06294557f4f26f2a865c0700 +Author: 球球 w +Date: Wed Oct 27 06:07:13 2021 +1000 + + fix some problems that picture is invisble on github + +commit 2df0de6eb29e9106f149da6ddb3dabc75d666bae +Author: 球球 w +Date: Wed Oct 27 05:08:06 2021 +1000 + + complete readme.md + +commit c7cb3160bab08f5966da364ed374987d313b5bdd +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Wed Oct 27 02:14:37 2021 +1000 + + Update README.md + +commit 97f6f9a84163c6e0af5be801b08f90664893e20b +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Wed Oct 27 02:07:28 2021 +1000 + + Update README.md + +commit 2d5c7f6272be55165e5b9b60239c511881da0404 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Wed Oct 27 01:48:01 2021 +1000 + + Delete improvedunet.png + +commit 8fc8a9874201fe650a0618143195d0da75f8fb76 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Wed Oct 27 01:47:38 2021 +1000 + + Add files via upload + +commit cb2f7a61ef1fe05956d05688bd55303906235164 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Wed Oct 27 01:46:13 2021 +1000 + + Add files via upload + +commit 0df443963e15e8cc17178cb410e35bc491c60da8 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Wed Oct 27 01:45:19 2021 +1000 + + Create plot1.png + +commit 34b5b724b2cbd19b0108818b31c514671d74d900 +Author: yousifpatti +Date: Wed Oct 27 01:36:07 2021 +1000 + + Added references to model and readme + + Added a reference to model and readme files to ensure the code used is appropriately referenced. + +commit b8042e57c601626a211f5b3d94c2398ba758836e +Author: Andrew Luong +Date: Wed Oct 27 01:07:35 2021 +1000 + + Modified Data Processing Method. Started training model with data - however accuracy is still wrong. Also output a predictions vs expected plot + +commit 357e67e977e14f56a4f6b19091e9d3bafa91fa37 +Author: 球球 w +Date: Wed Oct 27 01:01:43 2021 +1000 + + update train script argument check + +commit b1d468b761049b1f240053dfed3bd5275eed1953 +Author: 球球 w +Date: Wed Oct 27 00:57:53 2021 +1000 + + update argument check + +commit 115b13670a6bc6886edfbbce480769f509dcae11 +Author: yousifpatti +Date: Wed Oct 27 00:44:25 2021 +1000 + + Added the missing plotting functions + + Added the missing plotting for the predicted data images and the history. I had to expand the dimensions of the data as the network input contains the first number of samples dim but then I take and output and squeeze it to remove the extra dimension when plotting. 3 dims -> 4 dims - > 3 dims for the testing data. + +commit 335b76f335f799430b9c7f41e75ca587ddfb13d9 +Author: 球球 w +Date: Wed Oct 27 00:41:52 2021 +1000 + + implement function to show loss and accuracy curve + +commit 0849282534d4ec9b73b8f2ffa528954defea65e1 +Author: yousifpatti +Date: Wed Oct 27 00:40:24 2021 +1000 + + Added the driver and model trainer + + This new file contains the driver of the models and trainer model used in a previous commit. Changes include adding adding each layer separately and adding a pre-vq_vae layer. The model is compiled in sequence just to view the summary but it is not used. The custom train_step would train all the layers on it's own and calculate the loss on each step. Finally, losses are printed and model training history is saved. Furthermore, I added training hyperparameters that help adjust the model layers and propagate change easier compared to pervious implementation where it was just numbers and not variables. + +commit bb7119c29753da1e6bfb0c3d698fbb06feb2dfb3 +Author: Nifu +Date: Wed Oct 27 00:37:11 2021 +1000 + + Split dataset into training, validation and test + +commit 9604a04032d3716ca8ff30bcdb6825f87f8319b1 +Author: Zhuoxiao Chen +Date: Wed Oct 27 00:29:40 2021 +1000 + + update the data pre-processing file to the project + +commit 3640406c3914078287ff17fb481b8ebfadd38a5b +Author: 张涵 +Date: Wed Oct 27 00:27:03 2021 +1000 + + repair a bug in data_cleaning + +commit 39cc3062a4364cf615cb35d04e663ef0a03464e8 +Author: 张涵 +Date: Wed Oct 27 00:25:55 2021 +1000 + + add main.py,this file is uesd to train the model + +commit 41b45d580babae63c0b5ea836a6a3136801791c2 +Merge: fd55330e 19cf6b6a +Author: Zhuoxiao Chen +Date: Wed Oct 27 00:25:43 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/zhuoxiao-chen/PatternFlow into topic-recognition + +commit fd55330effe30994244309fcee8d700ede9a50bd +Author: Zhuoxiao Chen +Date: Wed Oct 27 00:25:22 2021 +1000 + + add the data pre-processing file to the project + +commit 745c9ec3ef44c4098b7c0e5549634b43c1f2ab87 +Author: 张涵 +Date: Wed Oct 27 00:25:06 2021 +1000 + + repairs a bug in this model + +commit 0f38afd2399faf7465aec9eaf6c7fde97fbe13ff +Author: 张涵 +Date: Wed Oct 27 00:24:35 2021 +1000 + + add the test script + +commit 119c8ba016bfbf591e8df52949ff5a5f6b78dc48 +Author: Zhuoxiao Chen +Date: Wed Oct 27 00:18:56 2021 +1000 + + add some meaningful comments to the train file + +commit 9d376cbbb3ce2096a7b1c7aa32b916eb41619a69 +Author: 张涵 +Date: Wed Oct 27 00:17:45 2021 +1000 + + adjust some bugs + +commit d036b594d65973981dc66feb788bca9abfe76afe +Author: Nifu +Date: Wed Oct 27 00:16:33 2021 +1000 + + Initialising data processing, get the filenames + +commit 87f033dd409ef132830599648c43c634d88f9cc4 +Author: 张涵 +Date: Wed Oct 27 00:12:50 2021 +1000 + + update the readme + +commit 9a028d328b680dd26812043a0e0737fe737612b6 +Author: 张涵 +Date: Tue Oct 26 23:59:15 2021 +1000 + + update the readmefile, add some plots + +commit 2c9406972d2edf897fee5eabd293b07ef8096469 +Author: Nifu +Date: Tue Oct 26 23:56:09 2021 +1000 + + Add documentation references + +commit 10035dd928cec273127f8c98fec2cda8f78eec6f +Author: 张涵 +Date: Tue Oct 26 23:50:01 2021 +1000 + + add dice plots + +commit 47fd82d12255b8120fc0fa1f620639dc5a193108 +Author: 张涵 +Date: Tue Oct 26 23:39:48 2021 +1000 + + add some predicted mask and groud truth examples + +commit c21571bc08ecc70f638d343998835cefd99728a3 +Author: 张涵 +Date: Tue Oct 26 23:38:45 2021 +1000 + + add test accuracy + +commit 6ed92759419d301342b30a9ebb73e7c78b03828c +Author: 张涵 +Date: Tue Oct 26 23:38:06 2021 +1000 + + add loss png + +commit 2d440fd1399fd6a6d8903a71b6228c3217db9d91 +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Tue Oct 26 23:15:18 2021 +1000 + + Model works. Got reasonably clear images, and the images vary. From last commit, just increased latent size and depth. + +commit 76e9ea08a8e22653e35b2377fb8942f38b92fff5 +Author: yousifpatti +Date: Tue Oct 26 22:59:39 2021 +1000 + + Added data loader functions + + Added data loading functions based on previous code for the last commits. This code is now in a single folder and provides the ability to loading the data from the folder and returns a pre-processed version of them. + +commit a9ca854b7f3871c1d291a3c7cb7791be89be7593 +Author: Chao-Chun Wu <52982031+white-segfault@users.noreply.github.com> +Date: Tue Oct 26 20:58:54 2021 +0800 + + commit check1 + +commit 444b43f0631fa5f2092ffd2ac9e47b8a0cf01c57 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Tue Oct 26 22:10:28 2021 +1000 + + Create README.md + +commit 81aaeab243d921a39a6692d44134d44472366ada +Author: yousifpatti +Date: Tue Oct 26 21:54:51 2021 +1000 + + Fresh start defined VectorQuantizer, ResidualStack, encoder and decoder + + Fresh start for the project as the previous implementation did not work. I have wrote new implementations for decoder and encoder while VectorQuantizer is still the same. + The difference now is that both encoder and decoder have a ResidualStack layers. + +commit fa42ac78b9a764c6173e9c13001affbc92d3d8bb +Author: Chris +Date: Tue Oct 26 21:52:54 2021 +1000 + + Removed redundant files. + +commit 4ef83fbae34bcebe0f637d3f58ad1704d12f1b5f +Author: Chris +Date: Tue Oct 26 21:47:33 2021 +1000 + + Docstrings added and minor corrections performed. + +commit 74b1e15834bdc2de17f50a49d780eea64114ded2 +Author: Chris +Date: Tue Oct 26 21:46:56 2021 +1000 + + Report completed. + +commit 1b567b4494b7d6d0a980e44e7eaaadd16d22afe2 +Author: Keith Dao +Date: Tue Oct 26 21:22:32 2021 +1000 + + Added trial parameters. + +commit ab03380fde092df247685d9d2e813858913a9f59 +Author: Andrew +Date: Tue Oct 26 21:21:14 2021 +1000 + + data generator created in driver script + +commit dffff72c655efafc347b578f933b4a14b0834b2a +Author: Anthony North +Date: Tue Oct 26 21:18:09 2021 +1000 + + add dataset loader tests + +commit 4d82838004c89cc9b6413f21202de8f8b4021285 +Author: Anthony North +Date: Tue Oct 26 21:17:28 2021 +1000 + + delete init.py -- not a module, conflict with pytest + +commit 49f8ebad0854c688ae42e1a54b950e1c626ef615 +Author: Tompnyx +Date: Tue Oct 26 19:57:18 2021 +1000 + + Added image reading, image normalisation and formatting, and image output + +commit fd43e3bcb8c756da2910d5ea66c4fe8d9c1cfda9 +Author: Pentaflouride +Date: Tue Oct 26 19:33:14 2021 +1000 + + added the driver.py file + +commit 66f7c676cb6ce8cc8b76ed6623df6c69c48f0b37 +Author: Pentaflouride +Date: Tue Oct 26 19:24:15 2021 +1000 + + took out some print statements out of the model file. Also slightly changed the plot in the notebook + +commit 1c047fe0b8aa8f11c545ea567bceae09128e4d40 +Author: Keith Dao +Date: Tue Oct 26 19:08:21 2021 +1000 + + Added required headings and description of data loading and splitting. + +commit a39d3bf11ee04d8391b39f33e99a78f8c20f4d18 +Author: yexincheng <50694493+yexincheng@users.noreply.github.com> +Date: Tue Oct 26 19:06:08 2021 +1000 + + Create README.md + +commit 19cf6b6ae9762c1a347afa1e867e11722acb202a +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Tue Oct 26 19:04:45 2021 +1000 + + Update README.md + +commit 7fcb69c4043d9414c33f904b398a57033d2b39d9 +Author: Keith Dao +Date: Tue Oct 26 19:03:25 2021 +1000 + + Added some general descriptions about StyleGAN and the problem. + +commit 62a7ca4ac9705fef16c35154e4216563349379f8 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Tue Oct 26 19:03:20 2021 +1000 + + Writing Implementation Details + +commit 63bc6f0cf54ff649cbe8a368027254cd948798ce +Merge: e357bbc3 ba4729dd +Author: JoeHolownia +Date: Tue Oct 26 19:01:18 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/JoeHolownia/PatternFlow into topic-recognition + + # Conflicts: + # recognition/s4433723_ADNI_alzheimers_perceiver/perceiver.py + +commit 69ad338d9c40da780b3c3f767db9dab5660e690d +Author: Keith Dao +Date: Tue Oct 26 18:33:55 2021 +1000 + + Added LeakyReLU to generator. + +commit 029a2cf26a7f0bf65441d99af4f374efdeeeeaac +Author: Keith Dao +Date: Tue Oct 26 18:33:37 2021 +1000 + + Removed AveragePooling and Dropout from the discriminator. Added Resizing to the discriminator. + +commit e357bbc31e4547963edbc4433c33cc374f045886 +Author: JoeHolownia +Date: Mon Oct 25 11:43:19 2021 +1000 + + Successfully adapted cifar perciever model to train on AKOA dataset, ~65% test accuracy after 3 epochs + +commit e87616cdc7754573bba21f329e0b191f7ac05386 +Author: Pentaflouride +Date: Tue Oct 26 18:57:03 2021 +1000 + + changed the jupyter notebook to a py file + +commit 02ce59c7e290df08a6562c089323aa2d9160225c +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Tue Oct 26 18:53:48 2021 +1000 + + Make some important information bold + +commit 92b88973aed863146ecc7d90f092503c7a375504 +Author: Zill wang +Date: Tue Oct 26 16:53:14 2021 +0800 + + Correct some incorrect package import, added summary to check the darknet53 struture + +commit 2e4935ef15be5b0016d93e6a3381952dbedfc5b3 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Tue Oct 26 18:52:39 2021 +1000 + + add requirements as code block to the MD + +commit 8c66d19365b86ad04cad06966c2b40a0a128a19b +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Tue Oct 26 18:51:41 2021 +1000 + + Update README.md + +commit fb8fb87d52b8266c01921bcfe8ec4096d7fce633 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Tue Oct 26 18:51:12 2021 +1000 + + Add some requirements + +commit 9b92a58c6f35707929f5db99ad479290b9473918 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Tue Oct 26 18:47:37 2021 +1000 + + Update README.md + + Update title + +commit 674419d8cb0df6f12864bcaa2ed6997f001f5d23 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Tue Oct 26 18:47:30 2021 +1000 + + Update README.md + +commit 0894bb1055294ad39717e5118c7cea446d5174bd +Author: MujiDipto +Date: Tue Oct 26 18:45:51 2021 +1000 + + Create data_loader script that loads and processes data for greater modularity + + Removed unused imports + Added more docstrings + data loading and processing separated from driver script + +commit 7e6cb8b6a02d7e07df2c98d8e1562cc9e89f19d5 +Author: StopTheBoolean +Date: Tue Oct 26 18:44:37 2021 +1000 + + Change data loader to use inbuilt tf image loading + +commit 48906ef134f0fd617293f5946d92097f995066ca +Author: lion-software +Date: Tue Oct 26 18:31:39 2021 +1000 + + Add trained model states + +commit 85f87b3e454da5a89855828b0a73012963cb66de +Author: xiaofangchen +Date: Tue Oct 26 16:29:04 2021 +0800 + + add gitignore + +commit c03a5270997d26c1e0a3bc353bf96ad1f30efef2 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Tue Oct 26 18:27:28 2021 +1000 + + add one figure of original image + +commit 336b7b5d5eb6db70d819d9e54446562055e941fb +Author: xiaofangchen +Date: Tue Oct 26 16:26:30 2021 +0800 + + update model and add process methods for 3d images + +commit a2d6105a4921df5d4a35644b35aa481ee58ebcaa +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Tue Oct 26 18:08:56 2021 +1000 + + Update README.md + +commit 23d09915869dd9206e0343da6f7a5706f2ec08f2 +Author: des-gan09 +Date: Tue Oct 26 18:03:18 2021 +1000 + + create model (not working) + +commit ee38177adc38ee4374af5d5e7974f3db7da90d06 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Tue Oct 26 18:00:30 2021 +1000 + + writing the dataset section + +commit 33b509eec78f8b248ade058c150b7d500257fd48 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Tue Oct 26 17:59:22 2021 +1000 + + Update README.md + +commit 52ec351ca225046c4b2d3ad84ccb166576f81b59 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Tue Oct 26 17:58:34 2021 +1000 + + writing dataset section + +commit 5639f86ad4b6cbbba9a100ed1b89eb9536ca1b00 +Author: Yash Talekar +Date: Tue Oct 26 17:16:55 2021 +1000 + + fixed and moved data fetching to driver.py + +commit c9a1ff83b20d1bd0c2fb23ca1139b6860d763ed5 +Author: Your Name +Date: Tue Oct 26 16:55:41 2021 +1000 + + Add comments for data_processing function. + +commit dbbd19ccbb94661a8c90113b5201575451cac44d +Author: Your Name +Date: Tue Oct 26 16:53:59 2021 +1000 + + Add some comments in Unet_model.py related to data_processing. + +commit 1660e2856ce1278872e5302cca8539195354f806 +Author: unicorn10086 <13607910397@163.com> +Date: Tue Oct 26 16:45:51 2021 +1000 + + adjust epochsize and batch to get better accuraccy + +commit 149f23ccc64e16506646b3a16354a838f8295046 +Author: Your Name +Date: Tue Oct 26 16:42:44 2021 +1000 + + add a function in data processing for main.py can call data processing. + +commit 4ffb33fbc71ae2c3c259bec9684658f657587fd0 +Author: tomdx +Date: Tue Oct 26 16:42:02 2021 +1000 + + Create VQVAE + Create encoder, decoder, vector quantiser and link the components up + +commit 86ee4eaa3dcac9b3c8464c8d9c2fd565577c078b +Author: Chris +Date: Tue Oct 26 16:41:55 2021 +1000 + + Drafted report. + +commit 40a98e45e73ed5c8e1924ee1b4cc2152d039efa6 +Author: Chris +Date: Tue Oct 26 16:41:38 2021 +1000 + + Created driver script. + +commit 0a1b4bf2231bd0b5a52f6a79da512dd60867cb16 +Author: lion-software +Date: Tue Oct 26 16:30:28 2021 +1000 + + Add some comments and rename files + +commit d4091a0d7f37b7af466b0f945d72c8be31e21b5e +Author: Pentaflouride +Date: Tue Oct 26 16:19:35 2021 +1000 + + added comments and cleaned up a bit of the code + +commit 112cd07425925891ab7a05280733b320705550c3 +Author: Zhien Zhang +Date: Tue Oct 26 15:44:02 2021 +1000 + + Change the loss funtion to Wasserstein GAN with gradient penalty + +commit d57924600ceb1d051c7b650379615fd87ac0e048 +Author: aryaman4152 +Date: Tue Oct 26 15:36:22 2021 +1000 + + Added VQ module + +commit 4b153b8bd483a6cbc6371a04dcb06f14d0f0ebcc +Author: Zhuoxiao Chen +Date: Tue Oct 26 15:34:15 2021 +1000 + + train function is improved + +commit 7ddf0dc5776de62cf771fa8e7fb946be41e8c4a1 +Author: lion-software +Date: Tue Oct 26 15:18:57 2021 +1000 + + New PixelCNN model and sampling script + +commit 42eb6cc3e0e0d5e067e2748d8d697b82f486156c +Author: StopTheBoolean +Date: Tue Oct 26 14:49:40 2021 +1000 + + Initial driver with load_data function + +commit 541b12f1c497ca2d36c8aa0368d163501a1c673d +Author: Pentaflouride +Date: Tue Oct 26 14:13:16 2021 +1000 + + The updated TSNE was not added in the last commit + +commit deaa0caf81f6e3a29499f0bf5d7cd61b2c7a0a5e +Author: Pentaflouride +Date: Tue Oct 26 14:06:49 2021 +1000 + + Added TSNE + +commit f77e56d0ee8bc20f18d67dc0f3e84de0eb5fdaef +Author: cici +Date: Tue Oct 26 11:51:29 2021 +0800 + + Add code for test accuracy. + +commit 2f03f18bb9c73d5012c0e2bd521833f58cb77463 +Author: Pentaflouride +Date: Tue Oct 26 13:31:07 2021 +1000 + + Evaluating the testing data + +commit 25e6019f9c3766ed0f76ed87627e5122cf6b1d36 +Author: tomdx +Date: Tue Oct 26 13:25:07 2021 +1000 + + Delete Task5, Perceiver transformer attempt in favour of Task6, VQVAE + +commit e42aa39df5907d323ddc43048d440624766ca1c1 +Author: tomdx +Date: Tue Oct 26 13:23:04 2021 +1000 + + Create function to load OASIS brain data, train and test splits + +commit 7e9f4789685141890b29cd40285632aaf4f380e5 +Author: aryaman4152 +Date: Tue Oct 26 13:15:34 2021 +1000 + + Created encoder, decoder for VQVAE + +commit d73f9e896b22993e0e2ab698265e2d1780827505 +Author: MujiDipto +Date: Tue Oct 26 13:15:17 2021 +1000 + + Complete processing module. Images are now decoded to Tensors + + Also added docstrings + Cleaned up code + +commit cba50504cec153efffec7f717c77a4bb7626fce1 +Author: Pentaflouride +Date: Tue Oct 26 13:07:01 2021 +1000 + + improving accuracy by changing hyper parameters + +commit e8f44db69e41d67e8ac98c847511ef25753c809f +Author: aryaman4152 +Date: Tue Oct 26 12:42:33 2021 +1000 + + Initial commit + +commit 906349027ef62dfc8d17dc109d7999c3050e01cb +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Tue Oct 26 12:31:49 2021 +1000 + + Got Sequential model working with the mock-up data. + +commit 0f37b106adef35f6375fe3e39d94b64173fd21a7 +Author: default-jamc +Date: Tue Oct 26 12:26:13 2021 +1000 + + Fixed bug in model pipeline, redefined leaky relu alpha + +commit f1a4fdada98d16643846908f5e264edf996d0a2e +Author: default-jamc +Date: Tue Oct 26 12:24:35 2021 +1000 + + Fixed bug where data and masks were not aligned properly, moved batching to own function + +commit 9e4e221fa8c637556540cefc8b66ab2f4fb10ac0 +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Tue Oct 26 12:17:27 2021 +1000 + + now have detail AND variation in the brain dataset using very low parameters + +commit 39f024798852715051c1b1b45616a42e30bbb0a1 +Author: Pentaflouride +Date: Tue Oct 26 12:16:37 2021 +1000 + + Working version of the GCN. Accuracy is too low + +commit 89f7c9b370eee2fbccea67890be3ecf844f764c6 +Author: NhatHuyNguyen +Date: Tue Oct 26 09:11:52 2021 +0700 + + Revert "change student folder name" + + This reverts commit edfe3e1562521627697d07101a6b408cfd33cfac. + +commit edfe3e1562521627697d07101a6b408cfd33cfac +Author: NhatHuyNguyen +Date: Tue Oct 26 08:59:08 2021 +0700 + + change student folder name + +commit c208729d2669ab2e249ca476651429d84a0c745c +Author: Pentaflouride +Date: Tue Oct 26 11:09:20 2021 +1000 + + added the numpy version of the dataset and split it up too + +commit 61e7d5c24bb7f1aec55e1bf43ab299bda045c208 +Author: RichardMarron0 <57399519+RichardMarron0@users.noreply.github.com> +Date: Tue Oct 26 10:42:21 2021 +1000 + + Delete recognition/Richard-Marron-StyleGAN directory + + Changed topics, directory redundant. + +commit 6e92c9a05774dc8a05b4931524c50fe128552c45 +Author: Cherian John +Date: Tue Oct 26 10:27:20 2021 +1000 + + trainer.py is now able to run training and show predictions from training, bug exists where this is only possible with a batch size of 1. + +commit e87ca8b066aae5b84b6d0e458890a558cdd02298 +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Tue Oct 26 10:21:51 2021 +1000 + + Added MSE loss to the reconstruction loss calculation of the VQ-VAE, and grouped code into functions callable from the driver file in future. Also added a pixelCNN scaffold to generate novel images. + +commit 74bb8806f351937cda3fabc98b2c1d745378dc83 +Author: cristina1096 +Date: Mon Oct 25 22:34:16 2021 +0000 + + Create model.py, add sub-model of generator, equalized linear layer, conv layer, modulate demodulate layer, up and down sample layer + +commit 74eaf0b5705cc8572c256f3a7241f7d514095df0 +Author: lion-software +Date: Tue Oct 26 07:37:57 2021 +1000 + + Add conditioning to PixelCNN + +commit d13add966f1a166c574a34ff57cc7f4ae4440af5 +Author: SteveInUQ +Date: Tue Oct 26 02:46:22 2021 +0800 + + Import import packages and add new function for support plotting + +commit 1685b2540248cd4ccffe618526600bb77c6af653 +Author: SteveInUQ +Date: Tue Oct 26 02:43:55 2021 +0800 + + remove useless package + +commit 8af2600cc61274605745f7531adfa870259c6012 +Author: SteveInUQ +Date: Tue Oct 26 02:38:38 2021 +0800 + + Fix a typo bug + +commit aa4ec6e2c00c629a911df1d9316430fdc5855146 +Author: unicorn10086 <13607910397@163.com> +Date: Tue Oct 26 03:26:35 2021 +1000 + + cannot plot,try jupyter notebook, and create vital env for tensorflow, it work + +commit 6d48a7734c07d5184e857eefcb73c08fa51010e7 +Author: unicorn10086 <13607910397@163.com> +Date: Tue Oct 26 03:22:37 2021 +1000 + + dic coeffict function + +commit 9d8789cbe281970b14e339fabb4b27a22d7d6e1d +Author: unicorn10086 <13607910397@163.com> +Date: Tue Oct 26 03:20:18 2021 +1000 + + adjust unet model and fit param + +commit 7f9dbd67b3c7af83808ac990ab828e588affb2e8 +Merge: b082a151 fdc27670 +Author: Zill wang +Date: Mon Oct 25 22:43:04 2021 +0800 + + Pull README git pull --rebase origin mastererge branch 'topic-recognition' of https://github.com/Zillwang/PatternFlow into topic-recognition + +commit b082a1518e9a7143324ebec6ad4491aab9548703 +Author: Zill wang +Date: Mon Oct 25 22:40:37 2021 +0800 + + Deleted unnecessary prints during the training added README file for different folders + +commit fc21539bcf7f494241ed954b4e55e233bcbed635 +Author: Zill wang +Date: Mon Oct 25 22:21:47 2021 +0800 + + Deleted unnecessary print during the iteration and added summary for check the darknet53 + +commit fdc27670e49b8d671a5b6c30bb908780117ea07a +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Mon Oct 25 22:11:35 2021 +0800 + + Update README.md + +commit b6aac03116027bb50f13e0eee907b2ff6822b4b5 +Author: MujiDipto +Date: Tue Oct 26 00:08:46 2021 +1000 + + added processing module. Done processing data + +commit 0aee6b99bb2a583c7f2619ff9b6c8c4d840bc149 +Author: Zhuoxiao Chen +Date: Mon Oct 25 22:33:23 2021 +1000 + + Make the code in train() more clear + +commit 04149fcfd53b5bf71f34cf95e89e0e139ccec329 +Author: Zhuoxiao Chen +Date: Mon Oct 25 22:28:02 2021 +1000 + + complete a function learning_rate_decay(). + +commit c53b62cfd159fb85cefdb2cd8272e0b54b4f1edf +Author: Zhuoxiao Chen +Date: Mon Oct 25 22:17:56 2021 +1000 + + complete a function - change_gradient_status() to freeze a network. + +commit cf755cfb398bfd2c226d3911f211cd316cc0b09a +Merge: 46f8ab50 fdb50d99 +Author: Zhuoxiao Chen +Date: Mon Oct 25 22:15:14 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/zhuoxiao-chen/PatternFlow into topic-recognition + +commit 46f8ab507037a0f9ffd170f05d8536dae9c35144 +Author: Zhuoxiao Chen +Date: Mon Oct 25 22:14:51 2021 +1000 + + complete a function - change_gradient_status() to freeze a network. + +commit 1fa1638e8ec745c1f8ca6e8e86158d371e4c0e04 +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Mon Oct 25 20:09:38 2021 +0800 + + Update README.md + +commit 0fe87019d608bfc154b0843a3a6f11b69b823841 +Author: Anthony North +Date: Mon Oct 25 20:47:02 2021 +1000 + + fix model (now learns something), simplify layers + + - remove unneccesary abstractions for latent, position encoding, input reshape, output logits + - add missing `add` connections to attention layers + - move model layer and weights initialisations to build (seems to be important) + +commit feeaadd0be74944a57901476a6f8d6438b1c56df +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Mon Oct 25 18:23:14 2021 +0800 + + Update README.md + +commit aa7d61aa0069a13ee7669b3375e4d5aa1d998a88 +Author: Bobby Melhem +Date: Mon Oct 25 19:54:52 2021 +1000 + + Implementation of StyleGAN2, WGAN-PR loss, Style Mixing, Intermediate Noise, Mapping Network - No Proven Results + +commit 7f54d0092700aa4a2fa594aaf877ccc49d92ba94 +Author: Shiyan Tang +Date: Mon Oct 25 19:44:49 2021 +1000 + + Modify comment for the process_data() function. + +commit 47bc75212e8c9ca5da567ba6f5f0234475f676c4 +Author: Shiyan Tang +Date: Mon Oct 25 18:48:03 2021 +1000 + + Add a new helper function in tools,py to get the output shape from the + vqvae encoder + +commit 625ee1594ae6068faf0ac47400957cd55361eda9 +Author: Shiyan Tang +Date: Mon Oct 25 18:43:04 2021 +1000 + + Intial commit of the pixelcnn model. + Consist of + 1. MaskedConvLayer + 2. ResidualBlock + 3. PixelCNN, the first two layers are componentss of the model. + +commit 941e70709c3f9351159ec121592b9f38c3e129c0 +Author: Zillwang <65603393+Zillwang@users.noreply.github.com> +Date: Mon Oct 25 16:39:46 2021 +0800 + + Update README.md + +commit d7d15ba4646e1269db7aebd5faaccb61ae5da30b +Author: SteveInUQ +Date: Mon Oct 25 16:37:51 2021 +0800 + + Add GCN Model class fix bug in the class of GraphConvolutionLayer + +commit 6c9095dd52972a999aab0e4f2bd793adfb3dafbf +Author: Zill wang +Date: Mon Oct 25 16:31:06 2021 +0800 + + Added driver yolo_loss dataloader utils utils_bbox train and yolo, train part is custom. referenced from https://github.com/bubbliiiing/yolo3-pytorch. + +commit bc67acde4f6f7cc7acd3e0a1860cbc3037b07e6e +Author: Pentaflouride +Date: Mon Oct 25 18:18:19 2021 +1000 + + Added the readme and datasets + +commit c16d7f7e4109c2bcc9ea3204f5dd40cfff187f78 +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Oct 25 18:07:05 2021 +1000 + + Added Relevant Imports + +commit e8fbc0c37c592df4b8a583c49453f8c0df091ce4 +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Mon Oct 25 18:05:17 2021 +1000 + + Implemented Cross Attention Layer + +commit 4c5d6434161a3f9bbc33e30ad6404c8e2b8a191a +Author: SteveInUQ +Date: Mon Oct 25 15:56:52 2021 +0800 + + Fix the bug, convert matrix in COO format to dense matrix and covert the return value to tensor in the function of one_hot_encoding + +commit d530ed04246b0ef4f917a29884688f68a3fbbbfc +Author: 张涵 +Date: Mon Oct 25 17:53:00 2021 +1000 + + repair some bugs in this model + +commit 8f263aae3060c15d715fe56066c76edbd9128be4 +Author: joe86726 +Date: Mon Oct 25 07:50:51 2021 +0000 + + trainer modified and save model function added + +commit 4c743be79c373d0731ceb8aa1ef91040c0c66590 +Author: MujiDipto +Date: Mon Oct 25 17:35:09 2021 +1000 + + Create process_data.py file for data processing functionalities + +commit 2cbee2683752fac839af8ba4b8967640f6d3f81f +Author: MujiDipto +Date: Mon Oct 25 17:32:18 2021 +1000 + + Rename "input_images" to "images" and "output_images" to "masks" to avoid confusion + +commit 926f0ee80e74571242dd505ba1613aecbf5ada30 +Author: Tony +Date: Mon Oct 25 17:18:28 2021 +1000 + + Plot one hot encoded label on various axes for all 6 classes + +commit 6c75d3e49cb8c3ac8248eb1b99903e4e4daafb3a +Author: Tannishpage +Date: Mon Oct 25 17:02:28 2021 +1000 + + Setting up folder and adding README file + +commit 534903da5c16112b2cbace8381d3ac61ae47eeb1 +Author: MujiDipto <82739274+MujiDipto@users.noreply.github.com> +Date: Mon Oct 25 16:23:18 2021 +1000 + + Update README.md + + Added author info and outline for future sections + +commit 612f9d3b8578d869fe2f53b80fbc0b9453ec2124 +Author: MujiDipto +Date: Mon Oct 25 16:17:09 2021 +1000 + + Create README.md + +commit 50d19eb32c5d15e4332805f77308a94568477ac3 +Author: lion-software +Date: Mon Oct 25 16:00:28 2021 +1000 + + Train gated pixelCNN model on top level + +commit 389baa1ebf639d0bc3c3843c5381e25c326b4377 +Author: MujiDipto +Date: Mon Oct 25 15:58:59 2021 +1000 + + Finished splitting dataset to train, test & val and created tf datasets + + Also reformatted code to run in main() + +commit 4e384d96ac65e1a4f8b4645f798b06838c0820dc +Author: Nifu +Date: Mon Oct 25 15:48:14 2021 +1000 + + Create compliers + +commit 96e09d4377f19f509304fd912349209245a43e18 +Author: RichardMarron0 +Date: Mon Oct 25 14:57:32 2021 +1000 + + Updated image filetype in markdown + +commit 8dde3bb5ccb1e55f3cf207d60b6e22159387f834 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Mon Oct 25 14:54:15 2021 +1000 + + Update README.md + +commit aba8af6445aaa195b22734b15eccc76e6fd7e037 +Author: RichardMarron0 +Date: Mon Oct 25 14:52:13 2021 +1000 + + Added figures for the readme + +commit 68d7cc20211641030516b215c5e8fbd47fbe809d +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Mon Oct 25 14:51:51 2021 +1000 + + Update README.md + +commit bf454b40502fc6a32cd3923525341d15f440927c +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Mon Oct 25 14:48:22 2021 +1000 + + Add files via upload + +commit fdb50d99903cfe829e4d0c11f9ed5ecf3f3b5843 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 14:32:45 2021 +1000 + + Update README.md + +commit f27bdfb9051470c5cf7dfa87084f22fa2d8078a1 +Author: RichardMarron0 +Date: Mon Oct 25 14:32:05 2021 +1000 + + Added preprocessing section + +commit 346745d19a13f15cbaa9391fee71c4e08285c5da +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 14:31:58 2021 +1000 + + Add some generated images + +commit 76d91e1af94c896894daec4e15318ac61da50a72 +Author: joe86726 +Date: Mon Oct 25 04:29:37 2021 +0000 + + minibatch_std built and trainer modified + +commit dfa4105320d1d3367a9426cdc0f60d8738dd91fa +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Mon Oct 25 14:26:31 2021 +1000 + + Update README.md + +commit 290fd3b7fff062d5c0340548e3a13bc871779f57 +Author: Zhuoxiao Chen +Date: Mon Oct 25 14:20:25 2021 +1000 + + Complete the generation part, now we can generate the images using the saved trained checkpoint + +commit 39e9ef1366ae689a312c8186cf089e359024b84e +Author: SteveInUQ +Date: Mon Oct 25 12:18:49 2021 +0800 + + Add data_preprocessing file, the file is used to load data, build graph and splite data into train, validation, and test dataset. + +commit 6c0586b084ed7780d409fbb0bc65aed66e4064a2 +Author: Zhuoxiao Chen +Date: Mon Oct 25 14:16:37 2021 +1000 + + Add more functions to the train file, as well as the comments + +commit cd313ff64b73bcf91ac7753afa79284a1ea58c12 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Mon Oct 25 14:14:40 2021 +1000 + + Update README.md + +commit 413216e5e6a31c9ebf87b7cc1f87f8f0fe0860b8 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Mon Oct 25 14:10:35 2021 +1000 + + Update README.md + +commit 3d924d5eafa145825dfd79e44fa89a67b92253e7 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Mon Oct 25 14:10:26 2021 +1000 + + Some images plots + +commit f10a377712415db813687303cef8de9baeaea6ab +Author: RichardMarron0 +Date: Mon Oct 25 13:55:32 2021 +1000 + + Small tweaks + +commit 7dbb53b0a32bb8107a6faf0c3a348524293f951c +Author: RichardMarron0 +Date: Mon Oct 25 13:54:18 2021 +1000 + + Removed some whitespace in docstrings + +commit 571f76ed9c4a44b4c1873847828782dd1f538b72 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 13:52:05 2021 +1000 + + Add figure of Progressive GAN + +commit 97d6620d1c97777de5a25ce9c00ae6129fa3be57 +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Mon Oct 25 13:51:50 2021 +1000 + + Update README.md + + I m writing the report + +commit 536dc4e375d1848be1cb6f80b06cff94385a4acb +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 13:48:20 2021 +1000 + + Writing Progressive GAN + +commit 06f21791e9a913c2fbdf4d4c872f4686152e3bb0 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 13:37:04 2021 +1000 + + Update README.md + +commit aada3953b0c3532002c6e3b666c8ace90b619101 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 13:35:57 2021 +1000 + + Write MD, Standard GAN part + +commit 3388f5c6eb72e493571533397dbae8b382d54ce3 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 13:22:34 2021 +1000 + + Delete recognition/s4481540_Zhuoxiao_Chen/.idea directory + +commit 74af1bb789ce9b14817278b5d653cfba6ac4c849 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 13:14:31 2021 +1000 + + Writing MD + +commit 0e8246694bdc83ea2ed7f1f29cfc289ca3245bf5 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 13:06:10 2021 +1000 + + Write the MD + +commit e566f9c87d52bb64cbff6ab9f59277f0e2139b66 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 13:05:09 2021 +1000 + + Writing the MD + +commit 3293a1923860a9a292da16597b16c1e818bd0669 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 12:53:20 2021 +1000 + + Writing MD + +commit f3332be91e9cc902ec859dd0afccd8144257ac21 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 12:52:03 2021 +1000 + + Writing the MD + +commit 757e6803540ed34bd151f299eb1fbcb7d52beec2 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 12:44:00 2021 +1000 + + Update README.md + +commit a4be94c659186754a9c96a1339de04be1c8cccc3 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 12:43:31 2021 +1000 + + Writing the documentation part. + +commit 6d32d9f41fb5bdba80ed412aa21bc5e0f181e103 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 12:25:06 2021 +1000 + + Adjust Figure size + +commit 239aebce9e593ea7f8fe8668a6dc72a296c92d37 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 12:24:41 2021 +1000 + + Adjust Figure size + +commit cd0d4fcb3ba1bc98b6fd9bc0328f03e9ca4c63a5 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 12:23:29 2021 +1000 + + Adjust the figure size + +commit 43e3af39b8b4f9f6f94220569805b8c68f5cc03b +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 12:21:46 2021 +1000 + + Insert model figure of styleGAN + +commit e86701c01e676b8f9a0bda7992aa591a1fcfd335 +Author: Pentaflouride +Date: Mon Oct 25 12:09:08 2021 +1000 + + first commit, testing if the forks and everything worked + +commit 13f9d93f8b5ef1d33d959912e4d44dcdfa26a4cf +Author: Yousif +Date: Mon Oct 25 11:57:27 2021 +1000 + + Added a sample residual stack and different encoder decoders + + Added a sample residual stack currently it does not function as it hasn't been yet integrated to the encoder and decoder layers. + The encoder and decoder layers has been changes as recommend by the tutor but the images still not clear and as such they are still being developed. + The commented out code consists of testing VectorQuantizer class and loss methods. Those items are not used in the code and are just for testing until I get a working version. + +commit 982bd06d25dc94e62bad61db7320db1452511e2a +Author: Ahmed +Date: Mon Oct 25 11:45:08 2021 +1000 + + attention is fixed, but now also does not work with everything else + +commit ba4729dda87d0db8b699ff3fbaa5c21e51eb9b8e +Author: JoeHolownia +Date: Mon Oct 25 11:43:19 2021 +1000 + + Successfully created perceiver model to run on AKOA dataset, ~65% test accuracy after 3 epochs + +commit 8e5a5dc140d071879a34f77f8a45b18a649d1458 +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Mon Oct 25 11:35:23 2021 +1000 + + StyleGAN2 now works with the MNIST dataset. doesnt mode collapse anymore and isnt just noise + +commit 79cd8078e2a332ea6507b17753586efb8a0486f0 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 11:12:53 2021 +1000 + + Add link to CVPR2019 + +commit 6b6d49a7d53d61a11ff48e6d5f6b740ddd959b70 +Author: Edward_Guilfoyle +Date: Mon Oct 25 11:11:13 2021 +1000 + + Continue working on the model format. jaccardIndex, yoloLoss and relevant docStrings added. + +commit 6214ab6cc5999b98d9acdd7f48b3a7c303e70cc0 +Author: Nifu +Date: Mon Oct 25 11:09:21 2021 +1000 + + Define loss function (dice loss) for the model + +commit fa027771f3270d41b35517966bdf91d6c8887947 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 11:08:17 2021 +1000 + + Add some links to this report. + +commit 009b7adf43c1698db6ab1824d8b020108a367fef +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 11:05:15 2021 +1000 + + Add some links to the introduction + +commit 9bc3557242fddd234fddc3cb33096c031d75f860 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 11:01:07 2021 +1000 + + Update README.md + +commit 8c26eb15145905d210b4df80686fb5884cef9bde +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 11:00:34 2021 +1000 + + Update README.md + +commit 639f7eca99e6b4cadd52bc47156cd4658d82913a +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 10:59:03 2021 +1000 + + Complete the Introduction of README.md + +commit 35bcad471320e7a8da7f320b5befee45c38dff20 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Mon Oct 25 10:33:04 2021 +1000 + + Writing the documentation - README.md + +commit 9a2929ee97b3bc92e12c4ea1c4afff19255db3e7 +Author: Kristian Thomassen +Date: Mon Oct 25 10:31:12 2021 +1000 + + Add plots for tracking loss and SSIM over epochs + +commit 9e9160b5000950296a157afde3068226dfbf6af1 +Author: Edward_Guilfoyle +Date: Mon Oct 25 10:26:52 2021 +1000 + + Continuing working on isolating cause of NANS. On reshape, images are now padded pixel values of 255 instead of 0. Started working on submission format + +commit f3ab685a8d02975618542c23156ce415aefe658c +Author: Zhuoxiao Chen +Date: Mon Oct 25 10:10:51 2021 +1000 + + Training section completed, now we can start to train the network. + +commit aa4d347f8561a226bcdf52ccc21145bbaf0dc516 +Author: Kristian Thomassen +Date: Mon Oct 25 10:08:44 2021 +1000 + + Add SSIM tracking after each epoch + +commit a91d9f0b53e197b830a2112de114059a4ab573b9 +Author: Tony +Date: Mon Oct 25 09:57:06 2021 +1000 + + added sources for other systems. CUDA not working. + +commit 7a5fc276bc87f56dc7b8861ca57f5b08e1b9574a +Author: Tony +Date: Mon Oct 25 08:58:05 2021 +1000 + + Migrated model from keras to tf.keras.layers. + +commit 5c470a238f8cfa0dae8e3b6699d648c44e81749f +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Mon Oct 25 08:29:14 2021 +1000 + + Written the README file and added the supporting images for use in the README. + +commit 9d9e7d8414604a0774d13b669bcf2dc9377e2930 +Author: Tony +Date: Mon Oct 25 06:28:44 2021 +1000 + + Modified _generate_y. Model appears to run(without gpu support). + +commit dd71940d31e0bb65e1c4b0b22e532a7cdf2c3bdc +Author: unicorn10086 <13607910397@163.com> +Date: Mon Oct 25 04:23:28 2021 +1000 + + try mnist + +commit ad0a3762d58cd9a714402956c8834b69d976a6a8 +Merge: 7656ba73 c57242e9 +Author: unicorn10086 <13607910397@163.com> +Date: Mon Oct 25 04:22:14 2021 +1000 + + Merge remote-tracking branch 'origin/topic-recognition' into topic-recognition + +commit 7656ba73b2a528f260b70a5a0d4b6055a6023bbe +Author: unicorn10086 <13607910397@163.com> +Date: Mon Oct 25 04:21:53 2021 +1000 + + unet add comment + +commit a4e6000010423fb32f68144dc2a57b3cb93e3fa7 +Author: unicorn10086 <13607910397@163.com> +Date: Mon Oct 25 04:20:16 2021 +1000 + + unet add comment + +commit c57242e9fb6b452400107eee955762c47fb539a1 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Mon Oct 25 04:16:34 2021 +1000 + + Delete unetmodel.py + +commit bb0bdd2e48c9b36e2b4c5eed483d9f453482f263 +Author: unicorn10086 <13607910397@163.com> +Date: Mon Oct 25 04:15:30 2021 +1000 + + unet decoder, code works on google colab. change the verison of python,python-32 can not download tensorflow + +commit 66aba5239abd6e48a31384193618b239ae09252b +Merge: b783312b 9b71bce5 +Author: unicorn10086 <13607910397@163.com> +Date: Mon Oct 25 04:13:26 2021 +1000 + + Merge remote-tracking branch 'origin/topic-recognition' into topic-recognition + + # Conflicts: + # recognition/45464948-ISICs-UNet/unetmodel.py + +commit b783312b23bd2dadbd829ca74135b48b7a30835e +Author: unicorn10086 <13607910397@163.com> +Date: Mon Oct 25 04:12:32 2021 +1000 + + unet decoder, code works on google colab. change the verison of python,python-32 can not download tensorflow + +commit 9b71bce53cbec9739e79fb77bd0dca4e7ad899bd +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Mon Oct 25 03:07:21 2021 +1000 + + improved unet image + +commit c16f71a084ea17ced5a92c45d94c279706be5289 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Mon Oct 25 03:04:47 2021 +1000 + + unet image + +commit 47e21aa3fdc89deefb3e10a57cdc8d1abc804163 +Author: 张涵 +Date: Mon Oct 25 02:50:59 2021 +1000 + + update the readme file and add the reference + +commit b7c7084ae8e4c1893235b05f595d5fb425a178f6 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Mon Oct 25 02:31:27 2021 +1000 + + Delete unetmodel.py + +commit f6a4d5ab7f96e216e79dd114364fbd4bb72e96a3 +Author: 张涵 +Date: Mon Oct 25 02:24:19 2021 +1000 + + update the readme file + +commit 6c5ee98195c5c10e85bab3502b71267a4a2fe0da +Author: 张涵 +Date: Mon Oct 25 02:22:02 2021 +1000 + + sssssss + +commit c0b75cb7df00bb9ad7bd0865a48c6a37f260c1c0 +Author: unicorn10086 <13607910397@163.com> +Date: Mon Oct 25 02:14:55 2021 +1000 + + create unet decoder part + +commit 5377b2ae6b29d21238abcf0c2c6ca4b4de009623 +Author: SteveInUQ +Date: Mon Oct 25 00:08:29 2021 +0800 + + Create model file and write Graph Convolution Layer. + +commit 630a4674c1323a4b06be6e05f4fd870a2ae47f23 +Author: 张涵 +Date: Mon Oct 25 01:45:09 2021 +1000 + + create readme file + +commit b1ecc34a04dd2c58dad112f5809fe46d8c7eed6c +Author: 张涵 +Date: Mon Oct 25 01:38:00 2021 +1000 + + add improved u-net stratucture + +commit b0f407368202379176d490f90b567c6fa9fa2d4a +Author: 张涵 +Date: Mon Oct 25 01:33:41 2021 +1000 + + add dice_cofficient module + +commit 4e35f8d31439920403b3a2ca5dd2f2ffa851ac6a +Author: 张涵 +Date: Mon Oct 25 01:26:36 2021 +1000 + + add data_cleaning.py + +commit f0a6127cdf09b4371b9b0c0b5d1315ab2e282608 +Author: 张涵 +Date: Mon Oct 25 01:22:52 2021 +1000 + + add model + +commit 7944412e6eb9a6833ab9ad575cafcbcad0c33532 +Author: itsukae <65611074+itsukae@users.noreply.github.com> +Date: Mon Oct 25 01:14:05 2021 +1000 + + Delete README.md + +commit 5f5c1564cea8c38415e6ddb566dbaea4b221a08d +Author: itsukae <65611074+itsukae@users.noreply.github.com> +Date: Mon Oct 25 01:13:55 2021 +1000 + + Delete dice_cofficient.py + +commit 21a06de1ca5685f130ece467c22a7e812ba64a0e +Author: itsukae <65611074+itsukae@users.noreply.github.com> +Date: Mon Oct 25 00:56:25 2021 +1000 + + Update README.md + +commit aa702564d04cb980f23249677f0a20e96c79988d +Author: default-jamc +Date: Mon Oct 25 00:49:52 2021 +1000 + + Finished defining model architecture. Fixed leaky relu alpha value + +commit 1e5c3d03014c5b63bdb6f9f18715e01dd769126c +Author: Shiyan Tang +Date: Mon Oct 25 00:48:08 2021 +1000 + + Add helper function in the dataset.py to help load data to the pixelcnn + model. + 1. train_codebook_generator() and validate_codebook_generator(), generators that load the processed data from dataset to the models in batches. + 2. process_data(), process the data before passing them to the model. + In particular, it pass the original image to the vqvae encorder and map + the ouput from the encoder to its closest latent embedding vector in the + latent space. + +commit 0acf5a79ba2edd035a2e88c1bd3ff302e719f3cd +Author: default-jamc +Date: Mon Oct 25 00:45:24 2021 +1000 + + Fixed bug so that mask values are 0 or 1, fixed bug in batching not working, defined the dice coefficient loss function, defined model compile and training + +commit b0395daf799fa84b3827cef2321b2850e4a386be +Author: itsukae <65611074+itsukae@users.noreply.github.com> +Date: Mon Oct 25 00:32:53 2021 +1000 + + Update README.md + +commit 0851f3be998afbd443a1ec8c31dce0b76d90af67 +Author: Nifu +Date: Mon Oct 25 00:03:21 2021 +1000 + + Fix the wrong filter size in the encoder module + +commit 10090b3b523c2496f83aeebac0ca889b8c304489 +Author: itsukae <65611074+itsukae@users.noreply.github.com> +Date: Sun Oct 24 23:57:52 2021 +1000 + + create README.md + +commit 8fa1309321c738cc068ea6f76b0b357290a494b3 +Author: Shiyan Tang +Date: Sun Oct 24 23:56:54 2021 +1000 + + 1. Add helper functions to tools.py to calculate the structured + similarity(ssim) between the original and reconstructured images. + + 2. Calculate the overall structured similarity on the test dataset. + +commit 01cc53b04abdcb2515c318ebd0ff2c9119cfe293 +Author: tmo <34272348+tmo@users.noreply.github.com> +Date: Sun Oct 24 23:54:03 2021 +1000 + + Project skeleton + +commit 11f36bd199ba5fe0eabce34af9c45525d2336a2f +Author: Korbin Daly +Date: Sun Oct 24 23:35:35 2021 +1000 + + Added most of the architecture for the imp unet + +commit 56de350ec249d8ae1a79204fb4ad0e47ad1d13df +Author: Zhuoxiao Chen +Date: Sun Oct 24 23:22:22 2021 +1000 + + add image transformormation to the train file + +commit 130b695e19a572d65a2df21f07b53faf4e048efb +Author: Nifu +Date: Sun Oct 24 23:21:13 2021 +1000 + + Use InstanceNormalization layer + +commit 2f95468a57e4c3c8c5d21f739c6bb6bdf31eb9d5 +Author: Nifu +Date: Sun Oct 24 23:16:12 2021 +1000 + + Create upsampling part of UNet + +commit ad65cad3a348a5520fbf3b09c9b7eac6db3d1d22 +Author: Zhuoxiao (Ivan) Chen <50613939+zhuoxiao-chen@users.noreply.github.com> +Date: Sun Oct 24 23:12:29 2021 +1000 + + Update README.md + + Set up a basic structure of the readme documentation. + +commit 2bbe1be10aafa909fdc6bd3b5e7d598b2a7c27a9 +Author: cici +Date: Sun Oct 24 21:09:52 2021 +0800 + + Add some comments. + +commit 72d6f2ed2a5b1424469e15c694ec1cbe4e454adf +Author: cici +Date: Sun Oct 24 21:09:15 2021 +0800 + + Add TSNE embeddings plot + +commit 7230bdfd00ff62bd762704f2a801edfe193bc64a +Author: cici +Date: Sun Oct 24 21:08:44 2021 +0800 + + Add plot. + +commit 3c2f572eb9831e0f190c9e68e078f783280c4c2b +Author: Zhuoxiao Chen +Date: Sun Oct 24 22:58:12 2021 +1000 + + Fix some bugs in Discriminator and make some comments. + +commit 955e956180f463c5e50df43bbf6f28467d7c83de +Author: cici +Date: Sun Oct 24 20:55:19 2021 +0800 + + Add TSNE embeddings plot. + +commit 527f32d314257913158c745022819d66a8e96677 +Author: des-gan09 +Date: Sun Oct 24 22:53:31 2021 +1000 + + add utils file (load image, normalization) + +commit cbb25afa32ac70e815c6299aa11a7e1bcad834bf +Author: cici +Date: Sun Oct 24 20:53:17 2021 +0800 + + Add code for t-SNE embeddings plot. + +commit a79f479aa40b586a8b1760bc4f89e631a0b82020 +Author: Shravan Shivpuri +Date: Sun Oct 24 22:44:43 2021 +1000 + + Major fixes to Model and Driver (See detailed log below): + + Model now trains but is overfitting training data quite well. Need to implement weighted loss to improve. + + Model: + 1. Moved ReLU to AFTER BN layer as per research paper. Previously BN was scheduled after ReLU. + 2. Changes output Conv3D layer feature map count to match number of classes (6) + 3. Changed loss to Categorical Cross Entropy (Not binary) + 4. Added scale factor to feature map counts + 5. Minor updates to Dice (F1) score (still not coded - however removing tf function decorator gets rid of errors) + 6. Added placeholder for Weighted cross entropy loss + + Driver: + 1. MAJOR BUGFIX: Removed accidentally applying standardization to the LABELS which was killing learning. + 2. Converted labels to one-hot encoding required for multi-class classification learning + 3. Wrapped in a simple training loop + +commit 7e4b00dd18b4637596feea5a519e96e61deda222 +Author: Zhuoxiao Chen +Date: Sun Oct 24 22:37:40 2021 +1000 + + Fix some bugs in Discriminator and make some comments. + +commit 80f57f108512dc045759cbdb845e2c54b1d477db +Author: Shravan Shivpuri +Date: Sun Oct 24 22:35:40 2021 +1000 + + Major fix to augmenter: Removed the line which changes the problem to a binary classification (Prostate vs all else). All 6 classes require segmentation. + +commit 5111b298ec87c1e3bae0f9961d51fc7b3dab2c63 +Author: Anthony North +Date: Sun Oct 24 22:30:50 2021 +1000 + + hflip concat default false + +commit 26d611d26946171f66bd9342373bc07e211ed09d +Author: Anthony North +Date: Sun Oct 24 21:58:42 2021 +1000 + + bugfix: disable weight sharing for first block + +commit 19ada648eb16f524ac38f46904f7ce7576563ec2 +Author: Nifu +Date: Sun Oct 24 21:45:10 2021 +1000 + + Create encoder module for Improved UNet + +commit 16e776a01ba79be586a779ba509aad5461bf8f2f +Author: Rick W +Date: Sun Oct 24 21:01:25 2021 +1000 + + Changed normalisation to use mean and sd. Added scheduler + +commit 1c2e0c55ae2c95126fe6b49370b1db8f70e6a848 +Author: JoeHolownia +Date: Sun Oct 24 20:12:15 2021 +1000 + + Made numpy transformation of data more efficient + +commit 4a4c6bab0fcd9e8aaac72ff6a841373de2e55fb6 +Author: Tony +Date: Sun Oct 24 19:52:39 2021 +1000 + + Training generator ran, model has issues. + +commit 25f82ceaeeebe10ddfd8c918e3c27812d2ce49bf +Author: 球球 w +Date: Sun Oct 24 19:43:52 2021 +1000 + + create a folder to store images + +commit 304f724025b2081c6cc8eae1060d630a0764a2db +Author: 球球 w +Date: Sun Oct 24 19:41:23 2021 +1000 + + add an picture that shows the result of tsne visualization + +commit 4218bd1f1093dc05d9e9fbb9e14a28fef29905e6 +Author: 球球 w +Date: Sun Oct 24 19:38:57 2021 +1000 + + driver script, run this script to see tsne visualization + +commit 0ada456c22218ed0ab9a59f26ace3e26a17867b9 +Author: Zhien Zhang +Date: Sun Oct 24 19:37:22 2021 +1000 + + Added simplified Resnet to DCGAN + +commit 6c9f8497376dc39ca73ff21bd1debc4aca08d914 +Author: 球球 w +Date: Sun Oct 24 19:35:21 2021 +1000 + + warp the training script into a class in order to be called in driver script + +commit 775ce75936d92e9a309845730512437c9db6b703 +Author: 球球 w +Date: Sun Oct 24 19:34:01 2021 +1000 + + fix the code style + +commit 0df993569d2539edcb4377124bc207b5ff98656b +Author: 球球 w +Date: Sun Oct 24 19:33:32 2021 +1000 + + fix the code style + +commit f3fd20eb90618e9056dbcb7c377d7744ec445cb0 +Author: 球球 w +Date: Sun Oct 24 19:25:28 2021 +1000 + + implement tsne visualization to show the training result. + +commit b6b2e8316de481416d5abc9d299d3b39d1416850 +Author: Shiyan Tang +Date: Sun Oct 24 19:05:38 2021 +1000 + + Initial commit of the driver file. + Build the VQVAE model with helper methods from the modules and plot some results of the model. + +commit 69a5dbddc1d1e5cdca868fa9734c4ba58d183431 +Author: Shiyan Tang +Date: Sun Oct 24 19:02:26 2021 +1000 + + Add a tool.py containing some helper methods to help with model output displays. + Containing two functions: + show_subplot() and plot_images() + to plot the reconstrcuted image from the vqvae against the original + image. + +commit 7d945057a7bc279b691cc5b3f49f9e6901044f10 +Author: Chris +Date: Sun Oct 24 18:56:26 2021 +1000 + + Unified StyleGAN class created. Model creation streamlined. Added variance to progress plot. + +commit 06c6a313f8691219031ae7037f183fae88d0e9bc +Author: 球球 w +Date: Sun Oct 24 18:53:57 2021 +1000 + + split the single file into different parts including model.py, layer.py and train.py + +commit 4833854a6d83e88960e749994cc8cde3afe2fe47 +Author: Shiyan Tang +Date: Sun Oct 24 18:42:41 2021 +1000 + + Add dataset.py to handle image preprocessing before passing them to the model. + It contains the following four methods: + 1. load_data(), load images from the dataset + 2. preprocess_image(), preprocess images to pass to the model + 3. data_generator() and validate_generator(), loads the images from + dataset, preprocesses them in the required format and pass them to + the model to train in batches. + +commit b360cf3e841ddffb334148e62c9aee3e241cdf12 +Author: Shiyan Tang +Date: Sun Oct 24 18:27:51 2021 +1000 + + Create a readme documentation for the algorithm. + +commit cfcd2bf61b8f6707ee7e92793b9e5af95ed4a4ad +Author: Shiyan Tang +Date: Sun Oct 24 18:16:33 2021 +1000 + + Initial commit of the vqvae model. + Consist of: + 1. encoder + 2. vector quantizer + 3. decoder + 4. a model connects the above three components to build the vqvae model. + +commit f68aa386a041f97c235e367af0abd2128108369b +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Sun Oct 24 18:13:03 2021 +1000 + + Fixed Labels and Image Datasets + +commit b665d6836212682eafc2acb96b4859048f6a55f1 +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Sun Oct 24 18:07:32 2021 +1000 + + Removed Test File and Added Correct file + +commit aa95e5e9a3e2b1ed99401dc5f87ceb4e05ec3e24 +Author: Your Name +Date: Sun Oct 24 18:06:38 2021 +1000 + + Modify plots function to make all figures in one plot, compare easily. + +commit a7a3e96f22b94d7a80ebd79d94840926c3118e72 +Author: Your Name +Date: Sun Oct 24 18:00:18 2021 +1000 + + Resize the image to make it adapt to model input shape. + +commit 8318c2d80cc84dc6d4b00facdddb00e28d4feb95 +Author: 球球 w +Date: Sun Oct 24 17:59:37 2021 +1000 + + complete the training process and show the result to stdout + +commit f00df43f708938ef4c03f28a3697d7a2245ea587 +Author: Your Name +Date: Sun Oct 24 17:49:36 2021 +1000 + + Create a main.py to test prediction and plots. + +commit cd0c454ee6b262988dabcc118dc929b465ed2eee +Author: Majurran <91605563+Majurran@users.noreply.github.com> +Date: Sun Oct 24 16:55:28 2021 +1000 + + Created Image Labels + +commit fc78723f2b4f22440a91d50118a451ffc04168d0 +Author: Kirbologist +Date: Sun Oct 24 16:53:34 2021 +1000 + + Initial commit, added basic functions for retrieving data + +commit 302e212ba399b84c0a56c12f7c4f93f62c57cf88 +Author: Tompnyx +Date: Sun Oct 24 16:52:30 2021 +1000 + + Implemented ISIC2018 data downloading and unzipping into driver.py + +commit c8378e99a4af6d07fc2ad87a3305b2f6fb21676e +Author: Korbin Daly +Date: Sun Oct 24 16:45:34 2021 +1000 + + Added a way to visualise the results of the unet predictions + +commit b676abd7fdffaae43fc40213e7856e468ebc46d9 +Author: 球球 w +Date: Sun Oct 24 16:23:19 2021 +1000 + + implement the GCN model which consist two GCN layers + +commit baa06cf474be1bef63ad3839143ea4ec2fcb8a3c +Author: MujiDipto +Date: Sun Oct 24 16:20:22 2021 +1000 + + create driver file to load data for processing + +commit de54136dd712c8768b3d813e22e237fd10263c93 +Author: Cherian John +Date: Sun Oct 24 16:01:29 2021 +1000 + + Fully implemented training and graphing codes + +commit 597f55fea4b3fce8793e6ec539617848c34f90fa +Author: Tompnyx +Date: Sun Oct 24 15:45:02 2021 +1000 + + Initial pass at implementing the improved UNet model, written in model.py + +commit f3da65d2d73a500bcf8a7c994c08a69f8dd9062f +Author: Kristian Thomassen +Date: Sun Oct 24 15:42:56 2021 +1000 + + Adjust hyperparameters to get SSIM>0.9 + + Best found so far after hours of experimenting! + Also renormalize pixels to between [-0.5, 0.5], which seems to improve + results. + +commit 352069087f84d1776e5d91f0c6af3ef35dd0aae4 +Author: Keith Dao +Date: Sun Oct 24 15:40:49 2021 +1000 + + Added print statements to the main functions. + +commit d9b72acdce2402356d9f4e6edba5d78270d7b80f +Author: Keith Dao +Date: Sun Oct 24 15:40:04 2021 +1000 + + Added missing type hinting. + +commit 8b0acb11d55ce658a25960d5cd31f9312a2110aa +Author: Keith Dao +Date: Sun Oct 24 15:38:26 2021 +1000 + + Increased leakyrelu alpha. + +commit be1d896d828293ca8576133158f16045548d43a6 +Author: Tompnyx +Date: Sun Oct 24 15:38:08 2021 +1000 + + Initial commit of empty files of model.py, driver.py, README.md, license.txt, and .gitignore + +commit 5afe7bfe5c0d76827cf4ee96a4f533c9894beadb +Author: Korbin Daly +Date: Sun Oct 24 15:28:29 2021 +1000 + + Unet model from demo 2 implemented along with compile and fit commands + +commit 2490164edab609d9633fb4473cdfbd6a74a97421 +Author: Andrew Luong +Date: Sun Oct 24 14:32:17 2021 +1000 + + Started to build draft of Improved UNET Model. + +commit 80514ad2fa7abaef0e875dc01ef2b436b59a2f94 +Author: Korbin Daly +Date: Sun Oct 24 14:09:42 2021 +1000 + + Changed name of files and added feature that adds extra diemensions to tensors + +commit 4d987f04a7a3c2211575f1e448a77c209f4d7f0e +Author: Yash Talekar +Date: Sun Oct 24 14:06:48 2021 +1000 + + finished data loading functions + +commit 6e73c7ac71401ea8d6e15928b6e9bbd091d7b960 +Author: Anthony North +Date: Sun Oct 24 13:54:50 2021 +1000 + + bugfix: missing 'add & norm' after multihead attention + refactoring + +commit 08730391dbe78e301ba40c957f10b2db4c44ca48 +Author: Tony +Date: Sun Oct 24 13:26:49 2021 +1000 + + Model change to ConveDTranspose, strides=(2). Compiles + +commit 3a72d141d7b2f41526ee8776c54f881c3ae7f0af +Author: Anthony North +Date: Sun Oct 24 13:10:23 2021 +1000 + + driver enhancements + + - add additional command line args + - add optional label smoothing + - add file shuffling + +commit 12305abf7baae593b572091b3c4e49f46f224add +Author: Tony +Date: Sun Oct 24 12:22:07 2021 +1000 + + First pass training generator. Not proven. + +commit 5176e2b2f03c6037ee18e32172dc81533b394adc +Author: Anthony North +Date: Sun Oct 24 11:56:47 2021 +1000 + + make latent array explicitly trainable + +commit 32ba347295a913451467f13b36d335150ca915c4 +Author: Anthony North +Date: Sun Oct 24 11:52:47 2021 +1000 + + preprocessing enhancements and fixes + + - separate train and eval batch sizing + - re-implement horizontal flip and concat (cardinality is now known) + - deduplicate common preprocessing steps + - shuffle splits + +commit 7f3ce307f70ab120139ad7d7634d7d2a8266d3c1 +Author: lion-software +Date: Sun Oct 24 11:26:29 2021 +1000 + + Train model and test wtih SSIM + +commit af014f2a2a50718b6b25b7e603eb034295eaa72b +Author: Rick W +Date: Sun Oct 24 07:09:49 2021 +1000 + + added batch normalisation + +commit 9bf556071d71dd9722b3faf0b592548ec2998561 +Author: Christian +Date: Sun Oct 24 05:46:15 2021 +1000 + + Update dataloader.py + + Update config. Best resolution mask config that can utilize all layers of Resnet stages + +commit d4ae63473b01d096eb6a365579880335aca9d95e +Author: Christian +Date: Sun Oct 24 05:26:55 2021 +1000 + + Update dataloader.py + + config adjustments for model testing + +commit 5d4376004f0d60b39d8cce4c508b7552dd895d2a +Author: Christian +Date: Sun Oct 24 05:25:37 2021 +1000 + + Update dataloader.py + + Temporarily Added Model Training, and Model Inferencing. + + Will move both to another .py file + +commit d6f94c9aa9d8ac81dc5c6ddc74d7d6fdf64ba2b5 +Author: Christian +Date: Sun Oct 24 05:24:48 2021 +1000 + + Update data_splitter.py + + corrected data splitting. + +commit 9f1583e526b3b32bc3983c6c415442b9e052859c +Author: Christian +Date: Sun Oct 24 04:50:52 2021 +1000 + + Create data_splitter.py + + Split data into Train, Val, Test and resize to 20% if W or H > 750 + +commit 97b1f469090b4639762d065263e089ad34f651e6 +Author: Rick W +Date: Sun Oct 24 04:34:47 2021 +1000 + + Changed one-hot encoding function, fixed prediction shape + +commit b73e1dc58319df781da0fb7af5ede9e1f94bbb6e +Author: joe86726 +Date: Sat Oct 23 17:12:48 2021 +0000 + + trainer built and tested + +commit 696fd6a8ce8c7b0f31b77d00b5593e2d98cd9744 +Author: Andrew +Date: Sun Oct 24 02:40:16 2021 +1000 + + unet model created + +commit 2d19c020bb8c0109314ecc634363cbeafa53d2f3 +Author: unicorn10086 <13607910397@163.com> +Date: Sun Oct 24 02:31:01 2021 +1000 + + create unet encoder part + +commit 67c0ed5bb7d90682e182abe683986cd595a79cb2 +Author: unicorn10086 <13607910397@163.com> +Date: Sun Oct 24 02:29:56 2021 +1000 + + create unet model file + +commit ef3b4c0255cc3a2988f727e9ba26a44f2c1ec655 +Author: unicorn10086 <13607910397@163.com> +Date: Sun Oct 24 02:26:28 2021 +1000 + + process image before train + +commit c6d9544223336479a8e71cb9a00eb66d1fdf734b +Author: unicorn10086 <13607910397@163.com> +Date: Sun Oct 24 02:24:33 2021 +1000 + + process image before train + +commit d421a31590b398415ab12a1961f04fd510300936 +Author: Korbin Daly +Date: Sun Oct 24 00:56:13 2021 +1000 + + Updated image reading to also resize the image into a 4:3 aspect ratio + +commit f8297c7e3558e10f155dc4b58a1cecc22afe4580 +Author: 球球 w +Date: Sat Oct 23 23:53:04 2021 +1000 + + fix an bug that will cause import error of torch.nn + +commit 143270449b71350b14eb32acef21359e5f325680 +Author: 球球 w +Date: Sat Oct 23 23:47:22 2021 +1000 + + implement the graph convolution layer and fix an bug that will cause adjacency matrix is None + +commit da00fdde412bfd1e9714845071029fb61a19a7c9 +Author: default-jamc +Date: Sat Oct 23 23:24:57 2021 +1000 + + Started defining model architecture, finished encoder path. started decoder path. + +commit d911619f0dcaa070b7b736a9195c146d82d01201 +Author: default-jamc +Date: Sat Oct 23 23:23:33 2021 +1000 + + Fixed error where masks had 3 channels, not 1 + +commit b8f1ac17af96748b8fe328d4c7c57e62e385ebee +Author: Zhuoxiao Chen +Date: Sat Oct 23 22:57:42 2021 +1000 + + Add some comments in Network.py for code readers understand the code easily. + +commit e5f8186ec5e62548b90f28a7190bdd441403e55f +Author: Zhuoxiao Chen +Date: Sat Oct 23 22:51:36 2021 +1000 + + Add some comments for function PixelNorm in network.py + +commit c64fce9bd5c12c962498c7a44e7890fd894477da +Author: joe86726 +Date: Sat Oct 23 12:48:45 2021 +0000 + + noise injection embedded in Gblock, tested + +commit 7a75723f3cfdbd753e48f6cda80ac561a59d7a9c +Author: s4581614 +Date: Sat Oct 23 22:35:11 2021 +1000 + + Train test val split, generators and basic model setup + +commit 899f01cab0bf84da3dd5ef9c0c299ebb7d5a0fe1 +Author: Keith Dao +Date: Sat Oct 23 22:10:59 2021 +1000 + + Slightly altered generator and discriminator structure. + +commit 54fe4d63c566c513af875f53e61ab87c84617828 +Author: Keith Dao +Date: Sat Oct 23 22:10:04 2021 +1000 + + Added functions to create and save generated sample images. + +commit 79a48ddc6624ab3302774b8bfba146e165bb75e8 +Author: 球球 w +Date: Sat Oct 23 21:28:12 2021 +1000 + + implement data loader. + +commit e39cd493685f8f8960e222d93791cd0dc25943a4 +Author: Your Name +Date: Sat Oct 23 21:10:41 2021 +1000 + + Implement a functionn to plots inputs,turth,prediction images.Not test. + +commit 0fb9703e8b5a057efeedbba1ae152bbb0bacebe0 +Author: Yousif +Date: Sat Oct 23 21:05:25 2021 +1000 + + Code clean-up and simplification of the model + + I removed and rearranged code to make it more clear as well as trying to get some images generated clearly. Currently the generated images are too basic. + +commit 24de146f76e23e6965f27e467fca8085544e3d00 +Author: NhatHuyNguyen +Date: Sat Oct 23 17:54:39 2021 +0700 + + change perceiver img size + +commit e9865e2b860d0c62eec1413e509a51a15605b8c1 +Author: NhatHuyNguyen +Date: Sat Oct 23 17:53:45 2021 +0700 + + change perceiver img size + +commit 6ce4eacdf6a6921bbfc5a0ae084e74b4cd9e8a7c +Author: NhatHuyNguyen +Date: Sat Oct 23 17:53:05 2021 +0700 + + change imgs size + +commit 25142bdfa42cbc6ffc56e438db5277e2e57d86a4 +Author: NhatHuyNguyen +Date: Sat Oct 23 17:51:43 2021 +0700 + + change imgs size + +commit 6f5e0aa346290e24cfd65c51a2fb1055ed15f114 +Author: NhatHuyNguyen <42346783+NhatHuyNguyen@users.noreply.github.com> +Date: Sat Oct 23 17:46:46 2021 +0700 + + fix imgs not showing + +commit 3d802bf57e7050e3a873dcd0c71e117d1bc6e770 +Author: NhatHuyNguyen <42346783+NhatHuyNguyen@users.noreply.github.com> +Date: Sat Oct 23 17:45:45 2021 +0700 + + fix img not showing + +commit c0052c1f6fd07b757a2f64b55761a0d5b1259330 +Author: NhatHuyNguyen <42346783+NhatHuyNguyen@users.noreply.github.com> +Date: Sat Oct 23 17:44:39 2021 +0700 + + Update README.md + +commit 722a46495e6d7527b67e5919c00ee1ccb99a7b72 +Author: NhatHuyNguyen +Date: Sat Oct 23 17:33:17 2021 +0700 + + perceiver img + +commit 84d903c8018ca7c80c17d43284bbd85570c685c6 +Author: NhatHuyNguyen +Date: Sat Oct 23 17:32:59 2021 +0700 + + add perceiver info + +commit 8594f6daf11cdd2869b7c244e58d6d4204640a7b +Author: s4581614 +Date: Sat Oct 23 20:23:58 2021 +1000 + + Data processing initial commit + +commit 56220b33c8ba2a464672962213b549fe756bb048 +Author: NhatHuyNguyen +Date: Sat Oct 23 17:20:41 2021 +0700 + + add more info on numpy datasets + +commit e20d3cd0298c9765043fc531c1020d534230c674 +Author: NhatHuyNguyen +Date: Sat Oct 23 17:14:19 2021 +0700 + + remove build (overload not necessary) + +commit cddcdf46b30c2666e98e222750584a70c5fce182 +Author: NhatHuyNguyen +Date: Sat Oct 23 17:13:53 2021 +0700 + + add main() + change ds location + +commit 14c25c3306f255f2e5a9758149bf5b3fa936b123 +Author: NhatHuyNguyen +Date: Sat Oct 23 17:13:04 2021 +0700 + + change imgs location + +commit e1437ce56a9e1d96b47b296cd2ff8409e6fb58e1 +Author: Anthony North +Date: Sat Oct 23 18:40:13 2021 +1000 + + bugfix: missing filename for eval output + +commit 559cbce0e9a71054d473173a258cdb11e2f9da6f +Author: ltaylor231 +Date: Sat Oct 23 18:31:49 2021 +1000 + + Improved model. Added multiple batch normalisation, dropout and leakyrelu layers. Also normalise data before passing into model. + +commit cce0961de4f580705c5b5755a1a2127f5823bee4 +Author: ltaylor231 +Date: Sat Oct 23 18:17:33 2021 +1000 + + last commit didn't seem to go through. Added testing data split. Implemented dice coeffecieent as loss function. Initial implementation of improved Unet implemented. + +commit c6188c636370dbde1b45643fd2ee6b04a0d9198c +Author: ltaylor231 +Date: Sat Oct 23 18:15:22 2021 +1000 + + added testing dataset, implemented dice coeffecient as loss function. Created first implementation of improved unet model. + +commit da31df2a25b2b4ecbe2b2213f5bda19019074bbb +Author: Anthony North +Date: Sat Oct 23 17:59:17 2021 +1000 + + add command line args for experiment driver + +commit 15a2dfc695447524cd33296de8edf89a4ac17691 +Author: Chris +Date: Sat Oct 23 17:19:47 2021 +1000 + + Independent styles per block working, addition of noise working, progress plotting function improved + +commit 3b8eb8b543a10b4e5c2b364fe7d4f8c0d17db54d +Author: Nifu +Date: Sat Oct 23 16:21:00 2021 +1000 + + Choosing ISIC dataset + +commit 3b345b19e7791084fc0c9e8beedf83ede144b849 +Author: Yash Talekar +Date: Sat Oct 23 16:03:51 2021 +1000 + + added file structure and initial import headers + +commit e1cee693176d00ac3026a27a394fbbec05934325 +Author: Anthony North +Date: Sat Oct 23 16:03:44 2021 +1000 + + setup experiment with hard-coded params + +commit 8feeab85e4a2f169e6c8353b5029668869f4bca3 +Author: Anthony North +Date: Sat Oct 23 15:48:02 2021 +1000 + + bugfix: missing weight name in latent layer + +commit 2a6adff319b370569babb32fac520f0fc050b352 +Author: Anthony North +Date: Sat Oct 23 15:21:20 2021 +1000 + + preprocessing: add one-hot encoding, image scaling + +commit adaae94218b07855a052ae3b770c1af1cdd6d58e +Author: lion-software +Date: Sat Oct 23 15:06:12 2021 +1000 + + Custom dataset and gitignore + +commit 587d77f58917e82d1a4de97593a8329a35d79b95 +Author: Zhuoxiao Chen +Date: Sat Oct 23 14:55:36 2021 +1000 + + complete Generator Part in network.py; complete model and optimiser set up in train.py + +commit 3bed78e62b8ce43272984b807087782f53b754ec +Author: JoeHolownia +Date: Sat Oct 23 14:28:29 2021 +1000 + + Modified input dataset to be AKOA + +commit 39e027a6dfd954d9fea5dfd5dcc5300a03ee4c01 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Oct 23 11:49:31 2021 +0800 + + Update readMe.md + +commit c91fcb2a392f178f7c4f588dd77e5ab8da3d96d8 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Oct 23 11:48:14 2021 +0800 + + Add files via upload + +commit 638c9f69b340e90cff9681168b0eb233f8fa5b24 +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Oct 23 11:47:17 2021 +0800 + + Add files via upload + +commit be620f19764a7f5fef9b5acac62465d5a503efbe +Author: ZIHAN LI <75516735+lingxi211Code@users.noreply.github.com> +Date: Sat Oct 23 11:43:15 2021 +0800 + + Create readMe.md + +commit db0947030cd2ebd79afaf5f04022c100345cb162 +Author: ltaylor231 +Date: Sat Oct 23 13:06:16 2021 +1000 + + Updated image loading using tensorflow. train and validation split created. + +commit 68830cb24e0bdbfcfed470d8b1bcd6454478039f +Author: Shravan Shivpuri +Date: Sat Oct 23 12:03:59 2021 +1000 + + Driver: Disabled F1 score which is erroring, downsampled model by 2x (input shape AND feature map counts) + +commit 59e2b190eb633b0f0beb39fde2fb13bd8801179a +Author: Shravan Shivpuri +Date: Sat Oct 23 12:02:41 2021 +1000 + + Training call from driver now explicitly retains metrics and returns dictionary + +commit 482fe7be53c16abbda7c2e73e1353f5c8efe6fdf +Author: Shravan Shivpuri +Date: Sat Oct 23 12:01:17 2021 +1000 + + Added data cleansing and downsampling steps in the augmenter + +commit 6bfeb3183975d85a09e3ca57ae6698655b185d0f +Author: Anthony North +Date: Sat Oct 23 11:54:38 2021 +1000 + + classification decoder return logits + +commit 3ba31c2b4933856fc61bd966f472642b7bbb0eec +Author: Tony +Date: Sat Oct 23 10:54:29 2021 +1000 + + Checked dimensions of all data and label files. + +commit 7dc54c8766a22e71f5b7467d3353f4a8b7a35957 +Author: Mallika Mukherji +Date: Sat Oct 23 10:42:41 2021 +1000 + + Fixed ResidualBlock.call() in pixelcnn + Added initialising pixelcnn model to driver script + +commit 4234b4f731189d436fad6a5e84aa7997c2acef1d +Author: Edward_Guilfoyle +Date: Sat Oct 23 08:24:36 2021 +1000 + + Rewrote loss function, included code to run on collab, fixed some bugs + +commit 3b2d04d1143712cb90aa3119d6f161a8c76087f9 +Author: joe86726 +Date: Fri Oct 22 17:09:59 2021 +0000 + + comment updated and weight scaled layer bug fixed + +commit e289ceffc3e9d041f98a67c78a93c20f16a73123 +Author: Andrew +Date: Sat Oct 23 01:42:36 2021 +1000 + + dropout layers added to encoder methods and decoder methods created + +commit 771eea37743bddc41d4dd75a1377018c7bbdde5c +Author: Andrew +Date: Sat Oct 23 01:36:26 2021 +1000 + + Methods for Encoder block of the UNET model added + +commit df42058a3bdb5df65ee091380b1bb0045b7b0e54 +Author: Zill wang +Date: Fri Oct 22 22:55:54 2021 +0800 + + Added make annotation file for xml, and added yolo_utils and results folder + +commit 1810844c558c1b86f1dff518ea174be171d51f81 +Author: David Phun +Date: Fri Oct 22 21:16:41 2021 +0700 + + Add driver files for training VQ-VAE as well as testing the trained model + +commit 1bda0cc3a5fd7e82e66f868aa4ec8b577c51d6e4 +Author: David Phun +Date: Fri Oct 22 21:15:15 2021 +0700 + + Modify model architecture + definition of Residual block + +commit 26b0d601dbb23afc15dacb71a04c10de993570cb +Author: JoeHolownia +Date: Fri Oct 22 22:24:44 2021 +1000 + + Added data processing script for AKOA data + +commit 0f0c9c453c92b14d445e0d2bcc41621a7eeb0501 +Author: default-jamc +Date: Fri Oct 22 22:24:00 2021 +1000 + + Initial revision of the UNet model. Basic pipeline function started. + +commit bb9c6496de63f384a09160283921c1ed170e4e59 +Author: default-jamc +Date: Fri Oct 22 22:21:49 2021 +1000 + + Finished data loading, preprocessing and splitting. All images loaded, reshaped and normalised. Examples are displayed to ensure they are loaded correctly. + +commit 36f4837ea6eab1e5dc24509826684b9f46385420 +Author: default-jamc +Date: Fri Oct 22 22:18:32 2021 +1000 + + Updated README, Added to the dataset, preprocessing and data split discussion. Added the Usage. Expanded Architecture section. + +commit 653e05951a50dc1bd681b04c20b7f6877ddbbb0e +Author: Yousif +Date: Fri Oct 22 21:31:56 2021 +1000 + + Added the trainer and testing output + + Added the trainer but it is currently not working well as the images produced are not clear and some layer is have issues with the gradient as the gradient is nan at that point. I have split the gradient as the tutor advised and I added some sample testing code to check the outputs. + The vectorQuantizer layer is the same from last commit but moved up. + +commit bb603700db985b62a307d2774be65eb97e2f82c6 +Author: Keith Dao +Date: Fri Oct 22 20:29:03 2021 +1000 + + Removed unused function. + +commit 419a88017b84749da792e70b836df5476e6810e7 +Author: 克勞德 +Date: Fri Oct 22 19:33:35 2021 +1000 + + Update README.md, adjust datetime and links + +commit 0ab889340248230d86f4a5f703733977ea5babe0 +Author: 克勞德 +Date: Fri Oct 22 19:29:12 2021 +1000 + + Update README.md, state date of final model trained + +commit bdee532767a37871e7108ef907abe6450c30cd2a +Author: 克勞德 +Date: Fri Oct 22 19:19:46 2021 +1000 + + Add Final Improved Unet model weights file + +commit 4637b935132ba19ce1feae1334c103fe7f707b0e +Author: 克勞德 +Date: Fri Oct 22 19:10:46 2021 +1000 + + Fix image mask combiner not calculating corretly + +commit 1e906fb8f77f1f20611cf0648b4a60b40216333d +Author: 克勞德 +Date: Fri Oct 22 19:09:45 2021 +1000 + + Add usage of image mask combiner + +commit 889bb2699df8551daf0a922f121fa854ff584eea +Author: 克勞德 +Date: Fri Oct 22 18:47:20 2021 +1000 + + Add image mask combiner function + +commit 45ef48f8557b9c52b4b191b865e621db1e74aae2 +Author: Keith Dao +Date: Fri Oct 22 18:24:13 2021 +1000 + + Using uniform distribution for noise image generation. + +commit 6df94e0abdefd0b53beec73ff5bd123341365813 +Author: NhatHuyNguyen +Date: Fri Oct 22 15:11:06 2021 +0700 + + add results and appendix + +commit 14c038d4c0274362f56517184ade15dddd283876 +Author: 克勞德 +Date: Fri Oct 22 17:56:56 2021 +1000 + + Adjust train parameter, Final training run + +commit e4f087f4484add6df423550a24f965d3e8e3851b +Author: 克勞德 +Date: Fri Oct 22 17:54:35 2021 +1000 + + Adjust training loss and dice plot front + +commit b54dc949531a41773e4fc9c3e378731874726c2c +Author: Keith Dao +Date: Fri Oct 22 17:16:44 2021 +1000 + + Updated hyperparameters for Trial 12. + +commit b4889c8a0c5a926c3617579b81ac265ab102a6eb +Author: 张涵 +Date: Fri Oct 22 17:01:50 2021 +1000 + + dice + +commit b4d1973ca21dd97e8e0cd95c5c64867334e3fa28 +Author: default-jamc +Date: Fri Oct 22 17:01:34 2021 +1000 + + Updated README, added new sections + +commit 446c1708c4301514e4409607354dd249b1e8086a +Author: Your Name +Date: Fri Oct 22 16:54:33 2021 +1000 + + Implement a function to calculate dice coefficient. + +commit 0ef7a7090d30384c5f783bc555c045d03d934096 +Author: Cherian John +Date: Fri Oct 22 16:48:20 2021 +1000 + + Set up model compilation, dice coeficiency and mask prediction from model + +commit e3a993cfe51ea9a5db9cc3ad806e186af4693e38 +Author: RichardMarron0 +Date: Fri Oct 22 16:40:12 2021 +1000 + + Switched off debugging + +commit c11958eb2d40d0d39df0340223eed452b4ad00f8 +Author: RichardMarron0 +Date: Fri Oct 22 16:39:54 2021 +1000 + + Added results section with figures + +commit 4d9be41d5f21f10b057fd7337c12258cc33a74e9 +Author: RichardMarron0 +Date: Fri Oct 22 16:39:21 2021 +1000 + + Added terminal output as a text file + +commit cc5e7187920f41c88a123b72df0ae16fbd584924 +Author: default-jamc +Date: Fri Oct 22 16:34:31 2021 +1000 + + Updated README, discussed the ISICs dataset and added references + +commit 079e21395d31333ba5ffbd921f3cddc9d6844973 +Author: itsukae <65611074+itsukae@users.noreply.github.com> +Date: Fri Oct 22 16:28:25 2021 +1000 + + Delete 45463718_TASK1_Segment_the_ISICs_data_set_with_the_Improved_UNet + +commit 03aae7a7c8d5a8d0149a6b4e15ec9a7f960a3060 +Author: Pritish Roy +Date: Fri Oct 22 16:21:50 2021 +1000 + + project dependencies and hyperparameters added in readme + +commit 3e1ea1424747b296519bea81885765099f3e9e67 +Author: Keith Dao +Date: Fri Oct 22 16:17:05 2021 +1000 + + Updated hyperparameters for Trial 11. + +commit 785047f3079345f70a1a817c3528241ba3bcbd36 +Author: itsukae <65611074+itsukae@users.noreply.github.com> +Date: Fri Oct 22 15:35:36 2021 +1000 + + Create 45463718_TASK1_Segment_the_ISICs_data_set_with_the_Improved_UNet + +commit 4e853911098a71ab041fe5140785fa448d708207 +Author: Keith Dao +Date: Fri Oct 22 15:19:34 2021 +1000 + + Updated hyperparameters for Trial 10. + +commit abc5989f673cc055720ac9e34ce910ec38e8af4c +Author: Rick W +Date: Fri Oct 22 15:04:58 2021 +1000 + + fixed reshape of images to preserve dimensions, added custom callback + +commit ae4a6f7a5fc65c0fc16a4b76e103f11cecb2e64f +Author: Wangxinqian <35109234+Wangxinqian@users.noreply.github.com> +Date: Fri Oct 22 14:50:23 2021 +1000 + + Create README.md + +commit e557f533d231624a073de2ef871f3ae559d083ee +Author: Pritish Roy +Date: Fri Oct 22 14:45:01 2021 +1000 + + added run driver file information in readme file + +commit 7220557c14700c9f5e7b3db4d72350c97eb00c58 +Author: RichardMarron0 +Date: Fri Oct 22 14:37:12 2021 +1000 + + Fixed the dice coefficient plot + +commit 766119bc5d0c3e8b2f709f53797df7e6a7e95238 +Author: Pritish Roy +Date: Fri Oct 22 14:22:07 2021 +1000 + + updated readme sections and patches information added + +commit b9e5ea66dd9cded0ea8545d8083b52a5b75f9974 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Oct 22 14:16:53 2021 +1000 + + Revise README.md + +commit be316559f2b43e97c2e7feaa2b997457739f089a +Merge: 1c3f4a8f 34136971 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Oct 22 14:14:37 2021 +1000 + + Merge remote-tracking branch 'origin/topic-recognition' into topic-recognition + +commit 1c3f4a8fb3c09c1c9c101dbcfa5bda7e03c3fe98 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Oct 22 14:14:08 2021 +1000 + + change epoch num from 1 to 20 + +commit 4bbc5b009a68f7f4fe6aada90a2d6c1992bbdfda +Author: RichardMarron0 +Date: Fri Oct 22 14:12:19 2021 +1000 + + Added plot of Dice coeff. score during training + +commit 3413697171ec96881d601ef0f10d9a2af01f3174 +Author: wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Oct 22 14:05:27 2021 +1000 + + Update README.md + + revise README.md + +commit c7c098e26bba9549e684cc0a7f0c40fd98eada26 +Author: 克勞德 +Date: Fri Oct 22 14:01:30 2021 +1000 + + Add driver script of load model weights and prediction example + +commit 4e45c613bb65471056cafdd551fdf916d727ddcb +Author: 克勞德 +Date: Fri Oct 22 14:00:00 2021 +1000 + + Add driver script of train model and save best model weights example + +commit 1a15e44dac6ea0968b71797290b871b7dc225fe7 +Author: Keith Dao +Date: Fri Oct 22 13:59:44 2021 +1000 + + Updated hyperparameters for Trial 9. + +commit 44ce226fd2378ccaab9611857760e18f16936b71 +Author: 克勞德 +Date: Fri Oct 22 13:57:46 2021 +1000 + + Modify driver script to train model and prediction example + +commit 52b516e0a62f9c06a887b702591dc175f8ecd209 +Author: RichardMarron0 +Date: Fri Oct 22 13:54:31 2021 +1000 + + Added model parameters section + +commit 353d80ec8681261623eaa4df7b08d0bf42818bf6 +Author: Pritish Roy +Date: Fri Oct 22 13:24:00 2021 +1000 + + updated readme with dataset and installation information + +commit 5a627db44e31eb7187154b29f4184d4664f0a235 +Author: Pritish Roy +Date: Fri Oct 22 13:10:36 2021 +1000 + + unnecessary folders and model saved weights removed + +commit c36172b4d218236baa4030a22a852ee358ec737e +Author: Pritish Roy +Date: Fri Oct 22 13:08:31 2021 +1000 + + augmentation function call turned off in data processor + +commit 464b7e0a0519d004ad957ce0a496084bf45511b1 +Author: Pritish Roy +Date: Fri Oct 22 13:04:14 2021 +1000 + + more content added in readme with figures added + +commit 8470817eaabc3b1be9531a31d4513d0d66158d3e +Author: RichardMarron0 +Date: Fri Oct 22 13:00:39 2021 +1000 + + Changed learning rate default to match optimizer + +commit 6b172b614caabc55acf1bfeae2ef992aa618c0b8 +Author: RichardMarron0 +Date: Fri Oct 22 12:41:43 2021 +1000 + + Added contents, dependencies and usage sections + +commit 24b142624034752ab75b62d45d77b2f813a00c32 +Author: EvaHolden +Date: Fri Oct 22 02:31:14 2021 +0000 + + Created functions to build and train the model - this version has around 74% test accuracy + +commit 61dc5db1c1a9a087bd7ed32bc9bc5adab2025514 +Author: xiaofangchen +Date: Fri Oct 22 10:29:44 2021 +0800 + + initialize model + +commit adeafe454b8b7361b2ff1586b9576082b54e2f2c +Author: RichardMarron0 +Date: Fri Oct 22 12:29:07 2021 +1000 + + Removed useless tf import + +commit 3e3c971bf8f3857c11a04a94126c870ae1a28644 +Author: RichardMarron0 +Date: Fri Oct 22 12:28:43 2021 +1000 + + Added load function and plotting function + +commit 19ed726ac74bba339f536607b6ba1f5111433b49 +Author: 克勞德 +Date: Fri Oct 22 12:16:53 2021 +1000 + + Add load weights function + +commit 2336c048c064b8072e2ad43d895aba2dbb24f76a +Author: Yousif +Date: Fri Oct 22 12:11:34 2021 +1000 + + Added VectorQuantizer and training history plot + + Added VectorQuantizer model implementation essentially the calculations are made in the call function however, the avg_probs and perplexity are yet to be integrated. + Some code clean-up and debugging is added to figure out issues with a layer producing nan. Currently working on the gradient training. + Added plot for the training loss using the history tracking. + +commit bea4f55fce0217d63a5edb4fd1d85521fbcc0974 +Author: Keith Dao +Date: Fri Oct 22 12:07:31 2021 +1000 + + Updated hyperparameters for Trial 8. + +commit 3ea3266cae456a02eb85f352bda0114b54920a77 +Author: xiaofangchen +Date: Fri Oct 22 10:05:16 2021 +0800 + + initialize model and data exploration + +commit 54d919fab4e975c8de14e83a7d910ef823338a96 +Author: 克勞德 +Date: Fri Oct 22 12:00:41 2021 +1000 + + Add save best model weights callback in train function + +commit df49d31748f05d7e90ff5b8a3c52842e75347c3b +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Fri Oct 22 11:41:49 2021 +1000 + + Started implementing basic Sequential Model with ReLu activation, Adam optimizer and SparseCatagoricalCrossEntropy + +commit d314514d776b928c6d5c291333abba0ad57765fd +Author: EvaHolden +Date: Fri Oct 22 01:29:12 2021 +0000 + + Re-initialise the dataset using the partially processed dataset (accidentially used the wrong dataset version) + +commit 4e5eefb12f08a03a29c27bacabb802dd80b15e4f +Author: 克勞德 +Date: Fri Oct 22 11:07:57 2021 +1000 + + Change default model to Improved Unet + +commit a994f93a254c91176c572fe0cc0c8915673598d4 +Author: 克勞德 +Date: Fri Oct 22 11:04:40 2021 +1000 + + Moved script modules to Modules folder except driver script + +commit f7f805436eca43a88eff7049d2dbbdcaf43cf2a1 +Author: 克勞德 +Date: Fri Oct 22 10:41:57 2021 +1000 + + Fourth Improved Unet test run + +commit 3fff55cd89112be28b167a0f1ceccdc7dfa493a7 +Author: 克勞德 +Date: Fri Oct 22 10:30:36 2021 +1000 + + Add Adam with decouple weight decay in train function + +commit 876fa1454aeb79772afaaeddb1399386395cd0f1 +Author: Tony +Date: Fri Oct 22 06:26:55 2021 +1000 + + Model compiles + +commit fa56003a4f5e9077b7c0309fe59790b2492e944e +Author: 克勞德 +Date: Fri Oct 22 01:55:55 2021 +1000 + + Third Improved Unet test run + +commit cb82f299b276b81e9b588130a98d38d88f085c1a +Author: 克勞德 +Date: Fri Oct 22 01:53:35 2021 +1000 + + Add learning rate epoch decay in train function + +commit 7eac8149d672a1dae1e3b0160445a98bebbc2bbe +Author: unicorn10086 <13607910397@163.com> +Date: Fri Oct 22 00:58:42 2021 +1000 + + load isic image + +commit 1d57944d6839641d1fb165e6fe9ae763181bc60c +Author: unicorn10086 <13607910397@163.com> +Date: Fri Oct 22 00:56:55 2021 +1000 + + load isic image + +commit 3e2407a97f9c9dfebce25d56ce7eb8071208e069 +Author: unicorn10086 <13607910397@163.com> +Date: Fri Oct 22 00:52:33 2021 +1000 + + load isic image + +commit 6d92ddb95cedc47d6b7ee0bc591a1eaa1329d3fc +Author: unicorn10086 <13607910397@163.com> +Date: Fri Oct 22 00:48:17 2021 +1000 + + load isic image + +commit 69ca563becbb47b9fa082bf6305b164496d064d6 +Author: Andrew +Date: Fri Oct 22 00:39:55 2021 +1000 + + adding and deleting jupyder notebooks + +commit 3f9291a163524a8ed5c51201c481afb6a499b794 +Author: 克勞德 +Date: Thu Oct 21 23:57:12 2021 +1000 + + Add print loading runtime + +commit 3fc5b0949a42dbe96b6f6dab258ec1339b84712f +Author: Andrew +Date: Thu Oct 21 23:49:50 2021 +1000 + + created scripts + +commit 538764a3bff25b347646a6c42ec7047d017ff851 +Author: 克勞德 +Date: Thu Oct 21 23:36:56 2021 +1000 + + Second Improved Unet test run + +commit de6ca455403ea528bdd094d1e958412a40f987e8 +Author: 克勞德 +Date: Thu Oct 21 23:35:35 2021 +1000 + + Add record history of traning loss and metrics + +commit 8f7486f86f22f795ed02f475b3587aa4e994a7a6 +Author: 克勞德 +Date: Thu Oct 21 23:00:06 2021 +1000 + + Add comment + +commit 63155edd0861a0f21b52bdd8deee34a366a37afa +Author: 克勞德 +Date: Thu Oct 21 22:55:25 2021 +1000 + + Add upsampling module function for Improved Unet + +commit bc4f88476f62a56f015454c0e3bb06017e00a56c +Author: 克勞德 +Date: Thu Oct 21 22:47:24 2021 +1000 + + Add localization module function for Improved Unet + +commit 1bbb550bec8e739cd87be63fbd129bd9897abbf0 +Author: 克勞德 +Date: Thu Oct 21 22:39:32 2021 +1000 + + Add context module function for Improved Unet + +commit c8fcb04d9619de6e326e9b1f41881be8e29747ed +Author: 克勞德 +Date: Thu Oct 21 22:17:15 2021 +1000 + + Add instance normalizarion layers in Improved Unet + +commit fce65f971e82928f55293f49e7eede6f1f0acc38 +Author: Andrew +Date: Thu Oct 21 22:09:09 2021 +1000 + + created readme.md + +commit ef55610d1b46cfa1aa3181759408cf98e4878a8f +Author: Chris +Date: Thu Oct 21 22:08:08 2021 +1000 + + StyleGAN working with AdaIN and single z input + +commit 5a8f2d65c41b1702955054e86525a18c957bf793 +Author: Kristian Thomassen +Date: Thu Oct 21 22:02:11 2021 +1000 + + Visualise first results of the VQVAE + + Add some plots of reconstructions and codebooks for a couple samples. + Also report SSIMs for those samples computed using tf.image.ssim + +commit 04fbb24dce0fb126d44045da93e55e68841bbe2c +Author: Keith Dao +Date: Thu Oct 21 20:47:12 2021 +1000 + + Updated parameters for Trial 7. + +commit 0b4b57d9b23e0e2a903848f62902a8ee5c032c58 +Author: Zhuoxiao Chen +Date: Thu Oct 21 20:46:42 2021 +1000 + + complete Discriminator in network.py + +commit 2f9a9bccfe1150f8831fe9afc00ef32a4d88c21f +Author: cici +Date: Thu Oct 21 18:46:08 2021 +0800 + + Improve README.MD file. + +commit e187be58368c72a32eeb408ee103562e56957b16 +Author: cici +Date: Thu Oct 21 18:44:49 2021 +0800 + + Improve the code parameters. + +commit 896f512e6709b4228498fe667d02c1e177694288 +Author: cici +Date: Thu Oct 21 18:33:17 2021 +0800 + + Improve the README.MD file. + +commit e9f493dce1ddefd89871a6e0d0154457bb9ad6d2 +Author: cici +Date: Thu Oct 21 18:26:12 2021 +0800 + + Improve the README.MD file. + +commit 8435b24de3c122b811dd476681f6d96f1d337f48 +Author: cici +Date: Thu Oct 21 18:19:50 2021 +0800 + + Add README.MD content. + +commit 88e90ff08eb663219d65eb6dcc2b7e279b398bf1 +Author: cici +Date: Thu Oct 21 18:18:16 2021 +0800 + + Add image folder. + +commit 8b3953fe6e32419a964802a5c1b3dc57ffd55a3b +Author: Tony +Date: Thu Oct 21 19:00:02 2021 +1000 + + Add 3D model. Untested + +commit d45715a709562da53c26b5eefd3fe8b8e523ebcb +Author: Keith Dao +Date: Thu Oct 21 18:41:16 2021 +1000 + + Updated parameters for Trial 6. + +commit 769944fb8ebeb26c8d1d5f8100ce1ee5c7ce7900 +Author: Keith Dao +Date: Thu Oct 21 18:40:58 2021 +1000 + + Updated parameters for Trial 5. + +commit c80d89c2b9d6941d069301608526cf9a001343f0 +Author: uououo +Date: Thu Oct 21 16:34:21 2021 +0800 + + correct gramma mistakes + +commit 125eac9a1a5b12d2006a548383796765d709b8e4 +Author: uououo +Date: Thu Oct 21 16:25:00 2021 +0800 + + add more instruction on README file + +commit cdecc3d5e0d675a4d87d05844b491745c16d807f +Author: uououo +Date: Thu Oct 21 16:22:25 2021 +0800 + + upload example image for instructions + +commit 30516a27c3309a1bcfd1d49cf95bc9820131bcf6 +Author: Mallika Mukherji +Date: Thu Oct 21 18:20:10 2021 +1000 + + Added PixelCNN model to pixelcnn.py + Imported pixelcnn.py in driver script + +commit e849a3c7f296b769bdc2d9c608befc0680082e8d +Author: Pritish Roy +Date: Thu Oct 21 17:45:39 2021 +1000 + + added information about perceiver and figures in readme file + +commit 30d7f27dc452b9d4fdcc49da1c2d108bc9525fca +Author: Zill wang +Date: Thu Oct 21 15:23:44 2021 +0800 + + Added upsampling for the three of anchors boxes and some data folder + +commit 66f80c14dd42969d5369dd43733a97bc779cad0a +Author: cici +Date: Thu Oct 21 15:11:50 2021 +0800 + + Add code for 3 layers GCN. + +commit 82dab30b43308f51aa501aad84ecdae6cc06299a +Author: lion-software +Date: Thu Oct 21 16:33:48 2021 +1000 + + Implement model + +commit 1fb1937abe1c810396e08f12237c56dcfe2700cd +Author: Keith Dao +Date: Thu Oct 21 16:32:08 2021 +1000 + + Updated parameters for Trial 4. + +commit d8015454440ecd8f6929970540a99a54530b9097 +Author: Your Name +Date: Thu Oct 21 16:30:25 2021 +1000 + + Rename function unsample to upsamle. Correct spelling. + +commit 252cf69cbd1cdef650a70cd78db619554dc03c3d +Author: cici +Date: Thu Oct 21 14:24:59 2021 +0800 + + Fix wrong indent in codes. + +commit e39a3f5e3437706934bd4a4be1f1edb7b59132a1 +Author: Your Name +Date: Thu Oct 21 16:24:01 2021 +1000 + + Impletement upsampling block, model complete, lack of comment. + +commit e34efcaf6939c16f417e4ee2d4a2cb7e32dbecca +Author: cici +Date: Thu Oct 21 14:15:32 2021 +0800 + + Change code in algorithm file for initializing the bias. + +commit 9b9db85419cdc4631702cc3f517925f96bd9f05c +Author: 克勞德 +Date: Thu Oct 21 15:28:16 2021 +1000 + + Add script comments, script author + +commit 7853feb3ab3a5d3a25c18425bdef0f930fb7574c +Author: cici +Date: Thu Oct 21 13:19:03 2021 +0800 + + Add code in test script for training model. + +commit 43d0bd54dc529756980341610a622eb6e7efd7f2 +Author: cici +Date: Thu Oct 21 12:41:08 2021 +0800 + + Add code for building adjacecncy matrix. + +commit d4cfe00efa91c986c6abbe7d04faa7410b1a1027 +Author: RichardMarron0 +Date: Thu Oct 21 14:38:02 2021 +1000 + + Start of the readme documentation + +commit bc952df1c6a407cf795d8e269fe83abe36b866cd +Author: RichardMarron0 +Date: Thu Oct 21 14:37:29 2021 +1000 + + Removed some lines which broke debugging + +commit 0994e9085955c8b961174beea4a07c82dae03ba0 +Author: cici +Date: Thu Oct 21 12:28:24 2021 +0800 + + Add normalize function in test file. + +commit 4f36f105370f4e4b303d2ea95221d8522932c565 +Author: Zhien Zhang +Date: Thu Oct 21 14:22:14 2021 +1000 + + Generator and Discriminator now use tensorflow.keras.Model instead of tensorflow.keras.Sequential + +commit a9fa430210b5a6823fd6bac3f8968a21f85749d0 +Author: cici +Date: Thu Oct 21 12:08:14 2021 +0800 + + Add the test file with basic codes to lead the data. + +commit 6dee0f5dbda90733f7d2c67247906e906030accc +Author: cici +Date: Thu Oct 21 12:04:45 2021 +0800 + + Add the GCN model structure to algorithm.py file. + +commit 0cc16f1db033e1ab9906a94dbe6b86cad2af9451 +Author: 克勞德 +Date: Thu Oct 21 13:58:59 2021 +1000 + + First Improved Unet test run + +commit e15ade8cf1b30716aac522ce731cd74efc01c7bd +Author: 克勞德 +Date: Thu Oct 21 13:57:41 2021 +1000 + + Add a construct Improved Unet function + +commit ec3786931ae9756ba1763bb3dbbf601609e2ed81 +Author: uly6mlv +Date: Thu Oct 21 13:50:03 2021 +1000 + + Updated README.md with description of GCN layer + +commit 118234f9bb2b92cff0e22acbdff81c8c3e9a811b +Author: RichardMarron0 +Date: Thu Oct 21 13:41:30 2021 +1000 + + Activation from softmax to sigmoid! Whoops... + +commit 05142f45eab7ddf92718d537e8184c279402c79d +Author: Zhuoxiao Chen +Date: Thu Oct 21 13:14:55 2021 +1000 + + complete data_loader to load datasets with various resolutions. + +commit 336a749f4296c3de6b0cf1047989f34f7988a686 +Author: Zhuoxiao Chen +Date: Thu Oct 21 13:09:57 2021 +1000 + + update .gitignore + +commit 6e50eeaed0c4516adfbd1fa9b127e799df101bf7 +Author: uly6mlv +Date: Thu Oct 21 13:08:45 2021 +1000 + + Updated README.md and model-graphs + +commit 833ee282b2d52725f116dca89ce561d36eb57fa5 +Author: uly6mlv +Date: Thu Oct 21 13:01:03 2021 +1000 + + Added README.md and model-graphs + +commit 6ece66c23d0d975879f833d5973d3448877bc15a +Author: RichardMarron0 +Date: Thu Oct 21 12:56:03 2021 +1000 + + Fixed normalisation & updated model loss/layers + +commit 8bb630c55429657295853366a63e11afabf6de03 +Author: cici +Date: Thu Oct 21 10:51:15 2021 +0800 + + Add algorighm.py file with code of Graph Convolution layer. + +commit 70fcecefda86cdef34290a785a8d71a36f60bf94 +Author: uly6mlv +Date: Thu Oct 21 11:54:23 2021 +1000 + + Added driver script: GCN_Node_Classification.ipynb + +commit a4d4554d65f76e559be64c875854baca801960e2 +Author: uly6mlv +Date: Thu Oct 21 11:50:01 2021 +1000 + + Updated GCNConv.py: set use_bias=False by default + +commit 4de3aa21bdb653c4e4d3dad56f33ecd913a7ce64 +Author: Zhien Zhang +Date: Thu Oct 21 11:45:01 2021 +1000 + + Fixed a typo: the use_bias=False is removed + +commit d2ec3003bfbfa63a572cb0a310a4714cf0505a34 +Author: Zhien Zhang +Date: Thu Oct 21 11:39:26 2021 +1000 + + Add control for whether to use neptune or not. Optimize the structure of models for following changes. + +commit ddcc2006ee6891479dd42093fe9b358327d93375 +Author: Keith Dao +Date: Thu Oct 21 10:58:01 2021 +1000 + + Removed incorrect folder. + +commit fa31ca9a60bce75a48254006d8e90333c83822ef +Author: Keith Dao +Date: Thu Oct 21 10:46:37 2021 +1000 + + Updated parameters for Trial 3. + +commit 7073ce7d3100752349bb083434518f63daf64ecd +Author: Keith Dao +Date: Thu Oct 21 10:45:05 2021 +1000 + + Fixed incorrect type for some parameters of the train function. + +commit 8722d82d84a1c107dffd9f623ac7491053ac0f3f +Author: Keith Dao +Date: Thu Oct 21 10:44:21 2021 +1000 + + Raising an error when no directories are provided. + +commit 93dd089b514e44611fd9bf3f0cfc4cfd447bb842 +Author: Tony +Date: Thu Oct 21 09:08:48 2021 +1000 + + Print image and label slices + +commit 22b44df355fdb3dd7af65e07b0bef240df053dcc +Author: Alex Patapan +Date: Thu Oct 21 08:26:40 2021 +1000 + + Added to readme + +commit d3686fd87ca2f1e39c2a4856a226a0c4096413c2 +Author: Robert +Date: Wed Oct 20 21:55:10 2021 +0000 + + Updated VQVAE with two-stage vector compression in line with Razavi et al. - SSIM above 0.8 + +commit 0b94937034177659bb75e327081175ec2fc001b3 +Author: Keith Dao +Date: Wed Oct 20 23:10:43 2021 +1000 + + Removed conv layer from the first discriminator block. + +commit b84656ae4939c84eba4ccad55fcf0a798158c6e8 +Author: Keith Dao +Date: Wed Oct 20 23:08:26 2021 +1000 + + Updated the data augmenatation to be always random. + +commit d70964904c97d94b0ad64bace5b2d93f855b6e25 +Author: Keith Dao +Date: Wed Oct 20 23:07:20 2021 +1000 + + Added the model name parameter. + +commit 2355e4d0e6388cd77d5f1f4e1904b2efaa991f72 +Author: Keith Dao +Date: Wed Oct 20 22:33:47 2021 +1000 + + Fixed syntax error with the train function. + +commit f63f709d2e1145a59b05950daf724cc0a51db149 +Author: Keith Dao +Date: Wed Oct 20 22:32:24 2021 +1000 + + Added model naming. + +commit a7c7687e0d43d266a6ffc448ed0a533f857d09ea +Author: Andrew Luong +Date: Wed Oct 20 21:15:50 2021 +1000 + + First commit. Begun image processing on a subset of images. Incomplete model included + +commit e1f24de18d95d8acc047f64a97feaadaf4e955ae +Author: cici +Date: Wed Oct 20 19:00:02 2021 +0800 + + Create the README.MD file + +commit 1c8ed5ff26e2b3068b433c927f067517b11d47e9 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Wed Oct 20 20:30:54 2021 +1000 + + Add main program to train the model with MNIST dataset. Failed to converge. + +commit 35a23ed375f84f9f4e20f654a4a7fcb5b41f00ce +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Wed Oct 20 20:27:14 2021 +1000 + + Add train helper method + +commit 2345127120af6b279f2c3a1ccc4a6b5e7f0476e6 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Wed Oct 20 20:19:28 2021 +1000 + + Create a basic vqvae model + +commit c561ea228ba77f68588b33b818d865cb18ee8823 +Author: Anthony North +Date: Wed Oct 20 19:57:40 2021 +1000 + + build perceiver model, fix batch_size bugs + +commit 693d5030b2c6184f266d22f77c6fed3640f9fbee +Author: Tony +Date: Wed Oct 20 19:41:42 2021 +1000 + + Being moving from jupyter to python files. + +commit b5fe5ddc001d0a731812a2ab815c7afe652da76a +Author: Kristian Thomassen +Date: Wed Oct 20 19:15:21 2021 +1000 + + Add first attempt at VQVAE and a basic driver script to fit it + +commit 26a519d1be634f057b756af47ae357562e8fbf83 +Author: 克勞德 +Date: Wed Oct 20 19:13:50 2021 +1000 + + First test run using baseline Unet model + +commit b002c25f08e6fd28eb041ae66fd04119d1042ef8 +Author: 克勞德 +Date: Wed Oct 20 19:01:41 2021 +1000 + + Add predict function + +commit 5d5a8a54f0aab57be98cc7fef45191d2e728ccf2 +Author: 克勞德 +Date: Wed Oct 20 18:33:14 2021 +1000 + + Add comments in train function + +commit 0dc8dde12d654861f31a70116795515e767edfbe +Author: 克勞德 +Date: Wed Oct 20 18:31:43 2021 +1000 + + Remove not needed test commands in driver script + +commit 3fedab9f30a2f78f0844a0b2fc14b97d29fb4b12 +Author: 克勞德 +Date: Wed Oct 20 18:19:20 2021 +1000 + + Add train model function in SegmentationModel file + +commit 60874da209beb3e18af5c53f7ff1f952c8412e73 +Author: Zhuoxiao Chen +Date: Wed Oct 20 17:39:18 2021 +1000 + + import required libraries, set up required arguments by argparse. + +commit 0951b69f8ef02d3fb43218790931e4233a5ad818 +Author: Zill wang +Date: Wed Oct 20 15:16:17 2021 +0800 + + Complete the yolo darknet53 + +commit 6568bee1183df0c9cdd9215b704a95987b2f1335 +Author: RichardMarron0 +Date: Wed Oct 20 17:01:18 2021 +1000 + + Got model to train properly. Needs fix to converge + +commit 373580fc36443cc6452647c7f53ab5763060cf01 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 20 14:39:27 2021 +0800 + + Add files via upload + +commit 65e71b994a79158e1db9b3b75862fec56cd82608 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 20 14:38:58 2021 +0800 + + Update README.md + +commit 1a9b20defe5209a35379b955380beae58f343290 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 20 14:35:06 2021 +0800 + + Delete images.txt + +commit 2981ea4ec4f34ad99e9fa6f0b04691cae4b2b52c +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 20 14:34:41 2021 +0800 + + Add files via upload + +commit b050520f23c6c159627dca518d891e03a4e2bea7 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 20 14:33:19 2021 +0800 + + Add a images file + +commit ba3820967ab6d29a26da7bc62f6a556c1ad9a196 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 20 14:26:26 2021 +0800 + + Add split data description + +commit 21c2f1fbe6224a58d96db850e69753c3a63165fc +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 20 14:21:20 2021 +0800 + + Add dependencies + +commit 9f8d553102be16581431be2b33304b496cd9a2af +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 20 14:13:47 2021 +0800 + + Add author + +commit 28e2dcd2828bbb0d26ea89da4ef54c42e82b6a89 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 20 14:11:30 2021 +0800 + + Update README.md + +commit 2958f101d215dc0aa485a039ad1bbed712299d32 +Author: Keith Dao +Date: Wed Oct 20 16:02:53 2021 +1000 + + Added the required hyperparameter constants. + +commit 4b32ded03a8a6137247702fd93db4b974cbf369d +Author: Keith Dao +Date: Wed Oct 20 15:57:44 2021 +1000 + + Corrected the epoch starting value for loss visualisation. + +commit 415dc0445b3919f0ee4376255bf2d9ef26400c35 +Author: Your Name +Date: Wed Oct 20 15:57:32 2021 +1000 + + Create Unet model, implement downsampling part. + +commit 8e75bf64c66dde67bedd5dd15e6a129c52201aee +Author: Keith Dao +Date: Wed Oct 20 15:54:57 2021 +1000 + + Removed lines used to test. + +commit 6524e30f30fc4f7f73dc13a1c701dc77c426332b +Author: Korbin Daly +Date: Wed Oct 20 15:54:09 2021 +1000 + + added code that splits training and test sets + +commit 8ebfa326606611b0750699397110dd702036bde4 +Author: Keith Dao +Date: Wed Oct 20 15:54:09 2021 +1000 + + Added dropout layers to the discrimnator. Fixed TypeError when calling disc_block. + +commit 41fb77d277c7c698ea84ce7023062196f3695b32 +Author: Keith Dao +Date: Wed Oct 20 15:50:13 2021 +1000 + + Added additional block to discriminator and made the kernel size an adjustable parameter. + +commit b1d24026b582a9db6a19a549e7dcbe50b45ab26c +Author: 克勞德 +Date: Wed Oct 20 15:41:44 2021 +1000 + + Add SegmentationModel file, added baseline Unet model. Edit comments. + +commit e2f64e5714ab83e161e8824052b3eb51fb9ad8c3 +Author: MujiDipto +Date: Wed Oct 20 15:32:06 2021 +1000 + + Delete load_data.ipynb + + Switching to PyCharm instead + +commit 829e8c2ac50d93605600dbe23389acf1a1470060 +Author: uououo +Date: Wed Oct 20 13:28:16 2021 +0800 + + add more instructions here + +commit 580d9c24e4c2e2cbca3f427962d3b02e0da97375 +Author: 克勞德 +Date: Wed Oct 20 15:15:07 2021 +1000 + + Update driver file to set the image shape to the max possible squared image shape + +commit 079acd06f96b9aa4d01e469c8777993111405e42 +Author: 克勞德 +Date: Wed Oct 20 15:12:58 2021 +1000 + + Update get_close2power function to return integer correctly + +commit caaea6b31e2caa31e3c8ae8140eadfe6db38743b +Author: uououo +Date: Wed Oct 20 13:08:21 2021 +0800 + + add more instructions + +commit a99b10fb04f608b2a6a5c941dcf050abe0aaaf1f +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 20 13:06:21 2021 +0800 + + Print description + +commit 07d45d11bd3d24f7501b6f2eff7db4a4ab03ec7d +Author: Christian +Date: Wed Oct 20 15:05:30 2021 +1000 + + image sample from dataset + + sample of loaded image + mask + +commit 681bab6feeb799397e88988571d9969350db0d11 +Author: Christian +Date: Wed Oct 20 15:04:48 2021 +1000 + + Update dataloader.py + + visualize.display_top_masks now working. successfully created dataset + +commit d5878d538d9494c77434634a7df4fdee7b7731ea +Author: uououo +Date: Wed Oct 20 13:00:02 2021 +0800 + + add more comments on model.py + +commit d1401dd83a84131d28f224133e7692b497207c8e +Author: 克勞德 +Date: Wed Oct 20 14:58:01 2021 +1000 + + Add get_close2power function in misc_utils file + +commit c8d22c1d213a1cfbcc9cdf822bec6aaaf392ece2 +Author: Christian +Date: Wed Oct 20 14:55:54 2021 +1000 + + Create dataloader.py + + Prepares image and mask loading for dataset. Still has load_mask issue + +commit 6ac1e0ebc35c1eb08f9eaaf43c654c6e7915341d +Author: Anthony North +Date: Wed Oct 20 14:55:11 2021 +1000 + + bugfix: args missing from multiheadattention call + +commit 6e18fcf22da02e495f7a3c06a58e28a157b42ef3 +Author: uououo +Date: Wed Oct 20 12:48:20 2021 +0800 + + correct more gramma mistakes and layout in readme + +commit 1ff8d8641d1098a95fb038cee63e91d7a7d66167 +Merge: e8ccecad 5fa2afd0 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Wed Oct 20 14:47:59 2021 +1000 + + Merge remote-tracking branch 'origin/topic-recognition' into topic-recognition + +commit e8ccecad5c13217c21e706b25e7bb6deebb79046 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Wed Oct 20 14:47:38 2021 +1000 + + add comments in the file + +commit 6a1f846437c4eb01eb6583e79a06d93478dd14a5 +Author: Zhien Zhang +Date: Wed Oct 20 14:43:30 2021 +1000 + + Restructure the existing code + +commit 5fa2afd06bcccc9d48a4b3879e2bf96a74b3aacc +Author: wakame <85863413+wakameds@users.noreply.github.com> +Date: Wed Oct 20 14:14:23 2021 +1000 + + Update README.md + + Revised README.md + +commit 8d95774c84389cbbec2f679fe83579c18ac6e0e6 +Author: Mark Coulon +Date: Wed Oct 20 14:10:07 2021 +1000 + + Fixed up the driver and added comments throughout + +commit 33ef876082b434163cbc8a24139cd4dfbda37f43 +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Wed Oct 20 14:08:37 2021 +1000 + + still suffers from mode collapse. wrote some pieces of code to look at changes in w. wrote the truncation function. and added some noise and scaling factors to D network in training to attempt to avoid mode collapse. + +commit 163b7a8e29ec256eb5d69330ac994358cf7ca2bc +Author: Mark Coulon +Date: Wed Oct 20 14:04:01 2021 +1000 + + Created functions to load the data in get it ready to be used by the model + +commit cd5d7fad038b9baefd5b39688934771b62511f43 +Author: Mark Coulon +Date: Wed Oct 20 14:03:12 2021 +1000 + + Added comments to the Improved Unet + +commit 42efddf6587673d21980a7fe562ea21234f3b2cb +Author: MujiDipto +Date: Wed Oct 20 13:56:51 2021 +1000 + + Create load_data notebook for loading and examining ISIC dataset + +commit 28f2fd8f2048458b256c38aaa40c018317c7fad4 +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Wed Oct 20 13:42:14 2021 +1000 + + Now successfully multiplying (A+I)*X*W. Added normalized weight matrix. + +commit 174f79b881047bae317da86545460f1a4d32e682 +Author: Mark Coulon +Date: Wed Oct 20 13:28:43 2021 +1000 + + Updated the model to be a IUnet instead of a Unet + +commit ca4b900aa666455b73a06a05e2375e2c8dc006c2 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Wed Oct 20 13:22:18 2021 +1000 + + Revised code + +commit 5468566d89f56497c1e99656d18a743038ec5d52 +Author: Anthony North +Date: Wed Oct 20 13:14:12 2021 +1000 + + add fourier pos embedding layer + +commit fd34233e6acb730f4915ae23752b2b3829c95983 +Merge: 89d50e3d e6d38577 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Wed Oct 20 13:06:17 2021 +1000 + + Merge remote-tracking branch 'origin/topic-recognition' into topic-recognition + +commit 89d50e3d2389bc620297cf0a56cb5b42a6620874 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Wed Oct 20 13:05:18 2021 +1000 + + Revised code in the files + +commit 6bd61372b44b540976083be66cf543cf874da11d +Author: 克勞德 +Date: Wed Oct 20 13:03:26 2021 +1000 + + Add SegmentationMetrics file, added dice coefficient and dice loss function + +commit 5ea7fa99f9a72fa820604e7cd11a7e1f647b202f +Author: Anthony North +Date: Wed Oct 20 12:38:12 2021 +1000 + + add attention, classifier decoder layers + +commit df4afbb3d4d4d7b2cc5b5b8d2023839fac48febc +Author: 克勞德 +Date: Wed Oct 20 12:27:42 2021 +1000 + + Add function to split data to train, validation and test set in data_utils file + +commit 922405ac7c7030ced5c929c1ca24939667b5c6ab +Author: Zill wang +Date: Wed Oct 20 10:16:05 2021 +0800 + + Test git + +commit 96cb22dc0ce175219fa8ec9e87c41e7efa489be3 +Author: Anthony North +Date: Wed Oct 20 11:57:36 2021 +1000 + + add latent and ffn layers + +commit 73dbea6b18a4ddc0c56b073d74149271e5681fb6 +Author: Zhien Zhang +Date: Wed Oct 20 11:29:30 2021 +1000 + + A working DCGAN + +commit ca7507672b92e9349c4a6fb518aed314e7f51104 +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Wed Oct 20 11:18:46 2021 +1000 + + Added code to plot comparison images between input and reconstructions, and calculate the ssim scores - currently >0.6 as required for testing dataset + +commit 0170089b9c4a611d16e6078586a0816d3f57493c +Author: uly6mlv +Date: Wed Oct 20 10:34:40 2021 +1000 + + Fixed the tensorflow warning in GCNConv.py + +commit d2690ca63d2466fc20832a7796a603ea770b86e2 +Author: Anthony North +Date: Wed Oct 20 10:28:28 2021 +1000 + + create model skeleton + +commit a5fba64923f175e504c31f5c0a74d2847e32b1c6 +Author: uly6mlv +Date: Wed Oct 20 10:14:12 2021 +1000 + + Fixed a bug in GCNConv when use_bias=True + +commit 5f64bd0053540fdd1678287821ff3dd4312b1e96 +Author: EvaHolden +Date: Wed Oct 20 00:10:26 2021 +0000 + + Visualise the dataset & split into test and train + +commit 43a05136e448c878b6988bbfaefe5a24e7ba98f4 +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Wed Oct 20 10:03:36 2021 +1000 + + Created a single vqvae model to be used in the training step with a single optimizer, instead of encoder, quantizer and decoder separated out. Replaced mse for reconstruction loss with ssim to significantly improve reconstruction quality. + +commit b4193a3f63baeaf550779f123911edc98d60a727 +Author: uly6mlv +Date: Wed Oct 20 09:58:46 2021 +1000 + + Added commenting + +commit d89af9f5e231d4356b39c8c305b8cb09b31af271 +Author: EvaHolden +Date: Tue Oct 19 23:32:18 2021 +0000 + + Initialise the dataset + +commit d63cf9dc922149858d8e1f4ce68b6fe0a9296063 +Author: Alex Patapan +Date: Wed Oct 20 09:26:22 2021 +1000 + + added more comments to main + +commit fdc4ca1deb21167cc896fdc8d27f2f6c0758bcdc +Author: EvaHolden +Date: Tue Oct 19 23:08:59 2021 +0000 + + Unzipped the dataset + +commit 1987152a0bee019e1833fd12fbaa3fb475d9d4a2 +Author: uly6mlv +Date: Wed Oct 20 08:53:22 2021 +1000 + + Simplified GCNConv.py + +commit 72de9a6bf316298223765d1836eb6bf31f98c4cd +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Wed Oct 20 07:36:35 2021 +1000 + + Finished code to convert data to tf.SparseTensor + +commit 613dd2142c8d3577c6ec85825725283f449ba151 +Author: Keith Dao +Date: Wed Oct 20 05:28:39 2021 +1000 + + Fixed NameError in loss visualisation. + +commit 5234a472a38f54c136a11423d5a3bfde8356f970 +Author: Rick W +Date: Wed Oct 20 03:53:27 2021 +1000 + + pull test_labels and test dice coefficient + +commit d76c1b5b27d4bb64ca965dfb681aa2faa0ee295c +Author: joe86726 +Date: Tue Oct 19 14:37:43 2021 +0000 + + Dnet built and output shape tested + +commit 48f60de1f5b6573badefd3c09847a06c40f29fa0 +Author: uououo +Date: Tue Oct 19 22:31:10 2021 +0800 + + correct the gramma mistakes in readme file + +commit d30ae22886eae4556f4f1486757883a7d33ac735 +Author: Bobby Melhem +Date: Tue Oct 19 23:02:11 2021 +1000 + + Implementation of DCGAN at 64x64 with proven results + +commit 86d78ba565061d86eaa48e94a83df60f4ed3dc2b +Author: Yousif +Date: Tue Oct 19 22:34:45 2021 +1000 + + Added a simple README.md file + + The README.md contains basic author information and headers for the sections needed. The sections will be completed once the model is generating clear images. + +commit 29515c4d3ced42080668238c7579a8279f3509f6 +Author: Keith Dao +Date: Tue Oct 19 22:03:00 2021 +1000 + + Moved the training functions to the gan file. + +commit 295aee8ff9fb7bf68342805cc46de52014864138 +Author: Nifu +Date: Tue Oct 19 21:15:57 2021 +1000 + + Create doc template + +commit fa4f411aeef8c910ede0e4aef8b11b1b5933c0f1 +Author: 克勞德 +Date: Tue Oct 19 20:18:48 2021 +1000 + + Add data_utils file, moved get_min_imageshape, load_rgbimages, load_masks functions + +commit 16cc22684d4a1fddac807fb9c8bfa697f25611dd +Author: 克勞德 +Date: Tue Oct 19 20:10:25 2021 +1000 + + Add misc_utils file, moved progressbar function + +commit bea8e7a5d592c2b61f843bb4ba75ee9988257135 +Author: joe86726 +Date: Tue Oct 19 09:38:04 2021 +0000 + + Dblock built and output shape tested + +commit e6d3857768a57ce84285ad437c1dde590d776e49 +Author: wakame <85863413+wakameds@users.noreply.github.com> +Date: Tue Oct 19 19:37:11 2021 +1000 + + Create README.md + + Create README.md + +commit f074191704e88cc230b8d9c6b7f35fb4941b0cf0 +Author: 克勞德 +Date: Tue Oct 19 19:21:43 2021 +1000 + + Add load and preprocess masks function + +commit 93c10a736b03110436f3849f30b5242b5c5460d6 +Author: 克勞德 +Date: Tue Oct 19 18:55:21 2021 +1000 + + Change get Minimum Image Shape to target mask path + +commit 4ab7edded1dd9ce4b8e1b5a26feab90ca6dbb183 +Author: 克勞德 +Date: Tue Oct 19 18:36:47 2021 +1000 + + Add load and preprocess RGB images function + +commit 32f67b21de4f0fe2ccbf4888a44472fe83c9be89 +Author: 克勞德 +Date: Tue Oct 19 18:29:52 2021 +1000 + + Adjust get Minimum Image Shape function + +commit 45e5f023fb416c954283d707ae17aa57e5b7c75f +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Tue Oct 19 18:24:00 2021 +1000 + + Revised code in the files and add comments + +commit 86d7999746431f4eafa102024bca71e2f8e580ae +Author: 克勞德 +Date: Tue Oct 19 18:05:19 2021 +1000 + + Add Custom Progress Bar and get Minimum Image Shape function + +commit 9546c5479f0ce1e8f7dbaf66ebbc7983ae564bad +Author: David Phun +Date: Tue Oct 19 14:14:31 2021 +0700 + + Adapt the test file to make it work with the new code of model.py + +commit 602b572abe495116b20d2185671a194491788ab1 +Author: David Phun +Date: Tue Oct 19 14:12:25 2021 +0700 + + Modify the test file of VQ VAE to make it work with the new code of model.py + +commit c641368acc3d0d358d8fafe44007595188fcc1cc +Author: David Phun +Date: Tue Oct 19 14:11:18 2021 +0700 + + Modify the architecture of the model and change the definition of the reconstruction loss to Normalized MSE isntead of MSE + +commit 4e0ef0eba6c218877807a2868538cc5a81706602 +Author: 克勞德 +Date: Tue Oct 19 16:55:26 2021 +1000 + + Read and plot single RGB image + +commit c7efa25bfcc57422f847937d47d48303f1bb9873 +Author: Chris +Date: Tue Oct 19 16:54:15 2021 +1000 + + Progress checkpoint before reconstruction and simplification + +commit 7acc6fad9c5cf49277bfc39321a683e89e2eedeb +Author: 克勞德 +Date: Tue Oct 19 16:45:35 2021 +1000 + + Rename driver script, added main function + +commit c5c083ebc98aa557ee6802fa2eb8053e995ee589 +Author: EvaHolden <92071079+EvaHolden@users.noreply.github.com> +Date: Tue Oct 19 15:26:21 2021 +1000 + + Created using Colaboratory + +commit 18ff434f75a5034736056515a5681cb6953730f1 +Author: EvaHolden <92071079+EvaHolden@users.noreply.github.com> +Date: Tue Oct 19 15:11:45 2021 +1000 + + Create README.md + +commit 94078c95fcf0b717aed790fd8447e764556e0170 +Author: RichardMarron0 +Date: Tue Oct 19 14:47:20 2021 +1000 + + Added train/test/validation function to driver + +commit ced41fc75a0c5ffe4b406035870221d0ecd9aa86 +Author: EvaHolden <92071079+EvaHolden@users.noreply.github.com> +Date: Tue Oct 19 14:30:08 2021 +1000 + + Delete FacebookNetworkGCN.ipynb + +commit a2aad117cf708cf235ad7749e6fda5a78edfdb88 +Author: EvaHolden <92071079+EvaHolden@users.noreply.github.com> +Date: Tue Oct 19 14:29:17 2021 +1000 + + Created using Colaboratory + +commit 3a5cb7c1119a304a437ec8b4513402630bceef5a +Author: 克勞德 +Date: Tue Oct 19 14:10:56 2021 +1000 + + This is my second commit, README typo correction + +commit ccdbf86d68b73eb7035b8b208cfd97fc3cd0f59a +Author: Christian +Date: Tue Oct 19 14:01:22 2021 +1000 + + add data loader to visualize.py + + created data dictionary. Draft of Data loader function using utils.py + +commit 62a32acbfba206128f621f093595337c0584ac8c +Author: 克勞德 +Date: Tue Oct 19 14:00:42 2021 +1000 + + This is my first commit + +commit f2ac14ee82eb8b2d65b6e046698bb511af31589c +Author: Rick W +Date: Tue Oct 19 12:58:59 2021 +1000 + + changed to unity-based normalisation to handle negative values + +commit 291babe93391f39bd4c4e81c46ccbdc6bee85017 +Author: RichardMarron0 +Date: Tue Oct 19 12:33:42 2021 +1000 + + Fixed color distortion from cv2 + +commit e4a7a29218a6bd7e0fd3a0630eb053d25a169a0d +Author: RichardMarron0 +Date: Tue Oct 19 12:28:27 2021 +1000 + + Fixed dimension issues between layers + +commit 3502351449a8e30f9a3dbfb860ab44362ef94bb3 +Author: David Phun +Date: Tue Oct 19 09:04:37 2021 +0700 + + Fix the calculation of SSIM for the evaluation process + +commit 4d718710e8704f80be20816034b543173dd5d9bc +Author: JoeHolownia +Date: Tue Oct 19 10:07:22 2021 +1000 + + Added requirements.txt file + +commit 5c4d60221d6de626c30b8e7bfbce2a9c7a3e8edc +Author: Keith Dao +Date: Tue Oct 19 09:53:48 2021 +1000 + + Updated hyperparameters and added type hinting to alleviate confusion of required datatype. + +commit b14de70e8b140e2936be6c39acf0eea501861db4 +Author: JoeHolownia +Date: Tue Oct 19 09:49:16 2021 +1000 + + Added e.g. cifar10 perceiver model for configuration testing on both windows and linux + +commit 58a2b6d94df074ab50fc3d6dfab5b54ed5113040 +Author: Keith Dao +Date: Tue Oct 19 09:46:38 2021 +1000 + + Loss x range starts at 1 if the starting epoch is 0. + +commit bd4449aa6d4bc4f319aca375b3a6ebd9ed9dee35 +Author: Keith Dao +Date: Tue Oct 19 09:43:39 2021 +1000 + + Loss visualisation starts at the starting epoch when specified. + +commit a887d787ac80e81cbdfbe523f0b5f7da98521e5e +Author: uly6mlv +Date: Tue Oct 19 09:41:57 2021 +1000 + + Modified graph.py--adding a function to compute D^{-\frac{1}{2}}\A\D^{-\frac{1}{2} + +commit 74a2bb451826e8586457b2f3f19b0c99460cdc48 +Author: Christian +Date: Tue Oct 19 08:47:10 2021 +1000 + + mask rcnn library + + Save mask rcnn library using TF 2.0 implementation by aktwelve, adapted from matterport + +commit 6066c4a9179904c915e139da82f31318e7899e52 +Author: David Phun +Date: Mon Oct 18 21:19:08 2021 +0700 + + Modify test script to check whether VQ VAE can produce validation scores during the training + the model can be saved after training + +commit e5bc87e2c781d751fb8ba2f538dde212f42c06d5 +Author: David Phun +Date: Mon Oct 18 21:17:15 2021 +0700 + + Modify the way to initialize VQ VAE to make Keras think that encoder, decoder, and quantizer as a whole model + +commit 39146ed40e0d3f2f8d00822114db7dbd1d0dfdbb +Author: David Phun +Date: Mon Oct 18 20:29:56 2021 +0700 + + Support SSIM metric for the reconstruction loss of VQ VAE and add the evaluation process for further testing and validating purposes + +commit 905d9f1d9e64a407bb0578a7eeecfc1b87825087 +Author: Korbin Daly +Date: Mon Oct 18 22:57:48 2021 +1000 + + added an image reader that adds the training and testing sets to array + +commit 9e1e61dec31e89c71e3689aa691f12f179fa9ea9 +Author: Anthony North +Date: Mon Oct 18 21:29:19 2021 +1000 + + add dataset preprocessing steps + +commit 297a16f80932963298cc9cfb83b8390b57c695a3 +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Mon Oct 18 21:07:25 2021 +1000 + + Whole System works, throws no errors for training and inference of both models + +commit 0047d7fab3f4829124150f123f5059217ebd3675 +Author: wakame <85863413+wakameds@users.noreply.github.com> +Date: Mon Oct 18 20:53:10 2021 +1000 + + Delete seg.png + + remove png file + +commit 3ab3953d0698ce4242819742b37a5372857c2c8d +Author: default-jamc +Date: Mon Oct 18 20:53:06 2021 +1000 + + Slightly extending README.md + +commit 50d0f45ecf02411f885db5356795a41c05803c0f +Author: wakame <85863413+wakameds@users.noreply.github.com> +Date: Mon Oct 18 20:52:54 2021 +1000 + + Delete dice_loss.png + + remove png file + +commit 1a107fca29da5b800591fb128a366fa476f1cf34 +Author: wakame <85863413+wakameds@users.noreply.github.com> +Date: Mon Oct 18 20:52:38 2021 +1000 + + Delete image.png + + remove png file + +commit 755fc904c93c71115192bffd8f75550adce09e6b +Author: wakame <85863413+wakameds@users.noreply.github.com> +Date: Mon Oct 18 20:52:15 2021 +1000 + + Delete dice_coefficient.png + + remove png file + +commit a4ae53aef737e9abb61d5f7f178d26c009c3cc0f +Author: default-jamc +Date: Mon Oct 18 20:35:57 2021 +1000 + + Adding initial README.md with general layout + +commit 0eeac419c0927989adacec8cf56ba8b1084edc1f +Author: Rick W +Date: Mon Oct 18 20:35:32 2021 +1000 + + added Adam params, one_hot marks other values as background + +commit cf4fce89492df5d36164aa6a28b4ab88aa19601e +Merge: ff31c097 44edc737 +Author: wakahide23 +Date: Mon Oct 18 09:59:58 2021 +0000 + + revised colab file with segmentation part + +commit ff31c0976c602a7bbb503df2172a48cca7eb3da7 +Merge: 27f0ba3b a4895686 +Author: wakahide23 +Date: Mon Oct 18 09:56:07 2021 +0000 + + revised colab file with segmentation part + +commit cfb0064c2c883dc7b7a474f6a0c86988b797bd69 +Author: Edward_Guilfoyle +Date: Mon Oct 18 19:29:02 2021 +1000 + + Lots of progress, yolo loss works (maybe), jaccard works, nonMaxSupress 90%. Model naning even with batch normalisation... + +commit ae1d7da486e88fe32dba467713fb7b5c64fda7e5 +Author: joe86726 +Date: Mon Oct 18 08:50:09 2021 +0000 + + Gnet built and output shape tested + +commit 27f0ba3bab4304c32f584bab11b22d25844e33d9 +Author: wakahide23 +Date: Mon Oct 18 07:30:47 2021 +0000 + + revised colab file with segmentation part + +commit 3bb17b08a33df2212ca02646d8c12a1c9312e2be +Author: Your Name +Date: Mon Oct 18 17:03:05 2021 +1000 + + Complete the data processing function and test load data correctly. + +commit 4d925f66a53c5bafdcea610a129980c9188cdf1f +Author: Chris +Date: Mon Oct 18 15:43:11 2021 +1000 + + AdaIN and Affine incorporated, but producing poor results + +commit eb5521793e84648bea2d9809d3f3bae9b88e9155 +Author: Christian +Date: Mon Oct 18 14:16:56 2021 +1000 + + add image resolutions distribution + + Included inspection of image resolution in megapixels + +commit e6b593684b80ea510828394ba288c8487bd16f86 +Author: Christian +Date: Mon Oct 18 13:50:35 2021 +1000 + + inspect data + + Visualized data, inspected image sizes, inspected masks. + Only 1 mask class is found + +commit c931de4e53a13b1947ab70d9e3cec7f8b3aa4f5f +Author: RichardMarron0 +Date: Mon Oct 18 13:36:34 2021 +1000 + + Unet model defined + +commit 69c2ce0adfd4005f169823e58aa079127ce95322 +Author: RichardMarron0 +Date: Mon Oct 18 11:55:11 2021 +1000 + + Actually completed downsampling half ;) + +commit 8f66793f595d633424f73e78ea762b9b840121f1 +Author: RichardMarron0 +Date: Mon Oct 18 11:53:03 2021 +1000 + + Initial downsampling side of Unet complete + +commit 9ddedd60cbfc120edc5b0a9c942246ada6607637 +Author: RichardMarron0 +Date: Mon Oct 18 11:44:26 2021 +1000 + + Added second context module and connections + +commit 3f2971c482735ca8f13e16a92e675eabf715c4df +Author: RichardMarron0 +Date: Mon Oct 18 11:38:12 2021 +1000 + + Added first context block to Unet model + +commit 6a8b2ac62a455a817d1a5eb150037c198f963905 +Author: Anthony North +Date: Mon Oct 18 11:19:31 2021 +1000 + + add fourier position encodings utils + +commit 44edc737e3a996f918d4ac425ffd8bd9f79a720d +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Mon Oct 18 09:06:54 2021 +1000 + + upload the results obtained from IUnet + +commit a489568618bf7a0837b940fc18d605e6a1cceb22 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Mon Oct 18 09:00:27 2021 +1000 + + remove dataloader ipynb + +commit 990299f2786f017493b4852fa2762624913cb271 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Mon Oct 18 08:55:26 2021 +1000 + + remove UNetjupyter.ipynb + +commit 633cb0d6987b69b084140fdcabccab9ee04b94d1 +Author: uly6mlv +Date: Mon Oct 18 08:11:09 2021 +1000 + + Added GCNConv.py with GCN Convolution algorithm + +commit a62fad55a4f97ffb5c5a027a32a9f1add6273c7d +Author: Korbin Daly +Date: Mon Oct 18 01:44:24 2021 +1000 + + Added imports for packages and changed name of python file + +commit 22f999189a4edd5fa41abf3e4848c519ebb6c6be +Author: David Phun +Date: Sun Oct 17 21:40:37 2021 +0700 + + Modify test script to check whether VQ VAE is trainable in OASIS dataset + +commit d284ae030ea445c53c0ceb180993a17a11c79dc6 +Author: David Phun +Date: Sun Oct 17 21:39:23 2021 +0700 + + Remove data variance argument in VQ VAE model and change the recon loss to MSE + +commit 17c32e4928c209f657d2631b005a24121744c542 +Author: David Phun +Date: Sun Oct 17 20:37:51 2021 +0700 + + Modify the architecture of AE and add script to test the overall VQ-VAE model + +commit 4c19e4856dd6f3f751cf034b8f5f0ecfc1a850d1 +Author: Mallika Mukherji +Date: Sun Oct 17 23:06:33 2021 +1000 + + Added training of the VQVAE model to driver script. + Added visualisation of reconstructions on test set. + Added visualisation of the discrete codes. + +commit 5fcc95755336700a8bc4f0e4152c5d2c377dfe91 +Author: David Phun +Date: Sun Oct 17 19:05:45 2021 +0700 + + Modify residual block architecture + Define the architecture for both encoder and decoder + +commit 30d2aaff9f98d64d6f6b4ad0b8080ca7d98196a9 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Sun Oct 17 21:09:44 2021 +1000 + + upload the main files for the improved Unet + +commit dcb8e90b6fcf6b45b70f35a4d41ff1355d25d087 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Sun Oct 17 21:08:51 2021 +1000 + + upload the files to train model and to evaluate the performance for the improved Unet + +commit dd7e85dddb3b57b7e6ab1a548db3686f5cb79c68 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Sun Oct 17 21:05:29 2021 +1000 + + upload the dataloader and criterion files for the improved UNet + +commit 02e566223b6823bae9eb5c88e3a32a02bca0588f +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Sun Oct 17 21:03:23 2021 +1000 + + upload the file for criterion for the improved UNet + +commit 86e492568f60684f03e9c36bbcc0107bc2b56c53 +Merge: 6b55cbda a6b3311a +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Sun Oct 17 21:01:21 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/wakameds/PatternFlow into topic-recognition + +commit 6b55cbda43528eef1dc72a0686d23d35bcdb75a8 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Sun Oct 17 20:56:21 2021 +1000 + + upload improved Unet model file + +commit fe02ef1b1fe58fde44c9b639990a63d504726213 +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Sun Oct 17 20:40:16 2021 +1000 + + changed the Synthesis network to accept a list of styles as per the paper. And that the synthesis network has the proper residual connection. Also inference now works properly + +commit 34b3706218384367eab9b2339115750fdb5fe370 +Author: Your Name +Date: Sun Oct 17 19:38:19 2021 +1000 + + Created a py file which is used to process data, not finished. + +commit e77c66d2e7a90f0e9a58c3a1caffcc09613ed296 +Author: Your Name +Date: Sun Oct 17 19:36:23 2021 +1000 + + Create readme file and test commit operation. + +commit ac623cd71d9481d35a84ca5b3f1b664141797125 +Author: David Phun +Date: Sun Oct 17 15:44:25 2021 +0700 + + Fix the declaration of residual block as a layer instead of a model to make it work with the keras model + +commit 933d99b86848af0ad9f9453ece0dfc8ffeabf51a +Author: Bobby Melhem +Date: Sun Oct 17 18:24:47 2021 +1000 + + Initial Preprocessing of Data and Test Plotting + +commit 7c62f6338683565ad70d55eaaf6fbb2c1c45f92c +Author: joe86726 +Date: Sun Oct 17 08:06:24 2021 +0000 + + Gblock modified(w is given as an arg), Gnet built half + +commit 770f0f9b782f6feeb4e9f31eed93c8f02eb55175 +Author: Edward_Guilfoyle +Date: Sun Oct 17 17:49:59 2021 +1000 + + Fixed inputs. Loss & Metric no longer nan :) .fit dosent break! + +commit 5c207a25df9bacdd94e27f9a3019bfe0ca5782bb +Author: uly6mlv +Date: Sun Oct 17 17:05:54 2021 +1000 + + added graph.py computing adj matrix and degree matrix + +commit a6b3311a8eaad5f6be1b762f7e0b9eefcaccd340 +Author: wakahide23 +Date: Sun Oct 17 06:46:49 2021 +0000 + + Improved Unet file from Colab + +commit a76ecba265e03bc8cb9de932853d13cea663d6b4 +Author: Cherian John +Date: Sun Oct 17 16:31:06 2021 +1000 + + Converted Data loader notebook to class in data_loader.py + +commit 1aab4bc7a6ddcf764f2cd5b09e2034223eea0427 +Author: Shravan Shivpuri +Date: Sun Oct 17 16:18:36 2021 +1000 + + Uncommented rounding to 0 decimals which is part of functionality mentioned in the previous commit + +commit 86007aa9b87e11f4a5fb1b9217099bc5e2612b5a +Author: Shravan Shivpuri +Date: Sun Oct 17 16:16:52 2021 +1000 + + Due to limited disk space on goliath servers, limiting to one augmentation per image. Augmentations are now layered uniform randomly. Removed standardization from pre-processing as this increases disk space due to storing floats. Standardization will be done in the driver script as part of the training process. + +commit 8ef46a883426fef38d7a367d09d1b32880062f7f +Author: David Phun +Date: Sun Oct 17 12:46:21 2021 +0700 + + Implement VQ quantizer and ResNet block for AE use + +commit aa39644e913a2ab41a1e2051a580ce204e267e8a +Author: Shravan Shivpuri +Date: Sun Oct 17 15:40:34 2021 +1000 + + Moved augmentation functions to a new python file. This needs to run in its own environment which is not compatible with the driver's environment requirements. + +commit 6d5266a9f71d2e78c4357198dd965958006cf52b +Author: Keith Dao +Date: Sun Oct 17 15:07:34 2021 +1000 + + Reduced the size of the MLP in the discriminator network. + +commit 4cfdd737a334c217afda79995200623a0d8f1b2a +Author: Keith Dao +Date: Sun Oct 17 14:24:53 2021 +1000 + + Added MLP to the discriminator network. + +commit d586a7447583c096a2d4423e75516e6cbb5bf4a0 +Author: Mallika Mukherji +Date: Sun Oct 17 13:54:27 2021 +1000 + + Added VQVAETrainer to implement VQVAE training loop. + +commit 0fa9016be52d67d0846eac8d8717de8baecfa925 +Author: RichardMarron0 +Date: Sun Oct 17 13:53:27 2021 +1000 + + Added small messages for the user + +commit 9c0ad624b676095a3d13ab44f3ed3d6bb78adb2e +Author: RichardMarron0 +Date: Sun Oct 17 13:38:02 2021 +1000 + + Added class params and updated print information + +commit 6db239a515f9248d5df025feb4e9ce07fc94ab9e +Author: RichardMarron0 +Date: Sun Oct 17 13:10:52 2021 +1000 + + Added normalisation and dice coefficient calc. + +commit b2d0e75550a4f519a18640815ff2248bca7a67a5 +Author: Pritish Roy +Date: Sun Oct 17 12:39:48 2021 +1000 + + trained model without data augmentation with results and figures + +commit 4b165e99f0ffbe27d55b555d43ec0845bfd44a80 +Author: Cherian John +Date: Sun Oct 17 12:09:02 2021 +1000 + + Completly bug fixed and tested network architecture + +commit c06345e82328e3a7083bc0fd3e031ca7c9acaddb +Author: Shravan Shivpuri +Date: Sun Oct 17 09:36:41 2021 +1000 + + Driver.py: Improved commenting and fixed pandas compatibility issue (line 146). Added batch size dimension to training data. + Model.py: Added f1 score metric definition, mangling to private variables, added train batch counter, fixed issue with loss function definition, added final conv3d layer to create desired output shape matching label, added function decorators + +commit 38031999a13bfd6be0a6efd8c759aab316f36df2 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Sat Oct 16 23:21:08 2021 +0800 + + Add the comments + +commit 7a6a2735503361fc98b77325c1892064095cccfc +Author: joe86726 +Date: Sat Oct 16 15:17:05 2021 +0000 + + Style added and WeightScaledLinear built + +commit 931edfacba03fada8cc0dc05d7eb6fc263247bf5 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Sat Oct 16 23:16:49 2021 +0800 + + The code of the model is integrated into unet.py + +commit ca575be45d376b33892e3e8d0cc712d7b777d743 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Sat Oct 16 23:15:59 2021 +0800 + + Add some clear comments + +commit 58e4615a91032e78662f3130b6115d1e4d0f8741 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Sat Oct 16 23:07:12 2021 +0800 + + The model is complete, the basic test is complete + + Improve the model and get the DSC is 0.81 on the test set + +commit 8db5dad93b3a6ba85e9686064175cbf5f779a3c8 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Sat Oct 16 23:04:09 2021 +0800 + + Need upload a new Unet.ipynb file + +commit f08748232cf36e612dba76ec427bdabc7cbf5ebc +Author: joe86726 +Date: Sat Oct 16 13:06:16 2021 +0000 + + MappingNet built and PixelNorm merged into MappingNet + +commit 2ca6a00eaa6931292d0cedcd3b58378d0afe3432 +Author: joe86726 +Date: Sat Oct 16 12:06:55 2021 +0000 + + Gblock built + +commit 3d3d24ab90e0dce0aaf0a78bc60d27a4a310b4ef +Author: Keith Dao +Date: Sat Oct 16 21:58:03 2021 +1000 + + Added data augmentation. + +commit 80bf1a77219eb9e0ed6c9906f5589a1117c7a742 +Author: Keith Dao +Date: Sat Oct 16 21:57:48 2021 +1000 + + Added parallel calls when converting images from int to float. + +commit 185d95b153c8ac88b168fefc1f28eaddc1321b86 +Author: Keith Dao +Date: Sat Oct 16 21:56:07 2021 +1000 + + Added method to augment the images. + +commit 507cfba00d6e7d146918e8a797f3240e9922cc76 +Author: NhatHuyNguyen +Date: Sat Oct 16 18:28:14 2021 +0700 + + add module info + +commit 957e43d14f77261155ab8db8367b86ef031f5115 +Author: NhatHuyNguyen +Date: Sat Oct 16 18:28:09 2021 +0700 + + add files to ignore + +commit d8ec472c337b686d3320f385c63b922b7c921454 +Author: NhatHuyNguyen +Date: Sat Oct 16 18:28:01 2021 +0700 + + add license (MIT) + +commit 03237790effecd589523e63e37655bf17a2742d1 +Author: Anthony North +Date: Sat Oct 16 17:59:09 2021 +1000 + + add tensorflow-addons -- lamb optimiser + +commit ebbebc6e2871d84324c1a0863b29e11aa25ff39d +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Sat Oct 16 15:58:26 2021 +0800 + + Improve model + + The old model cannot reach 0.8 avg dice similarity at test, following paper to try this new model + +commit 36a47cac0458c305946c52262ebb80d6d32d6df2 +Author: Chris +Date: Sat Oct 16 17:41:28 2021 +1000 + + Custom standard deviation layer working + +commit f07e690884b72b6dc697bc2173fb7d0e3b744623 +Author: Chris +Date: Sat Oct 16 16:37:12 2021 +1000 + + DCGAN converted to TF Functional API + +commit 54ed30e0103ce734af8a68c15d93597170906ee3 +Author: Chris +Date: Sat Oct 16 16:26:24 2021 +1000 + + DCGAN converted to TF Functional API + +commit 9e22d92e8d26fcbe4e1e7ef1d479894fb819881e +Author: Chris +Date: Sat Oct 16 14:05:12 2021 +1000 + + Initial commit + +commit 410981a94be8ab744305fcac7d2b85fa3f06661f +Author: Mallika Mukherji +Date: Sat Oct 16 13:26:14 2021 +1000 + + Added encoder and decoder blocks to VQVAE model. + +commit 30af7eca3e80966992006219d64db078c3138af7 +Author: Rick W +Date: Sat Oct 16 13:22:50 2021 +1000 + + unsuccessful training, added hyperparameters + +commit 26a297df75774c2009232faef72c5e8eab337612 +Author: Pritish Roy +Date: Sat Oct 16 12:18:29 2021 +1000 + + docstrings added where missing in files + +commit 5fa35eacf398915a0d0a5eaec2cfacf3e6639f84 +Author: Pritish Roy +Date: Sat Oct 16 12:14:43 2021 +1000 + + build perceiver transformer model using tensorflow + +commit 54fe5a632638871166e45030fcffc98ed67225d2 +Author: RichardMarron0 +Date: Sat Oct 16 11:47:49 2021 +1000 + + Added new main and unet module + +commit cac5c251732137437233a1ec38eb558b2aae9004 +Author: Mallika Mukherji +Date: Sat Oct 16 11:43:06 2021 +1000 + + Added custom layer to implement vector quantizer logic. + +commit 5abedf1b9bbe66a0cf8e68b9179c86426ad224ee +Author: RichardMarron0 +Date: Sat Oct 16 10:45:45 2021 +1000 + + Changed to the improved unet because of time + +commit 6fcbe52f1334d295e33a11ef64e2b8f8f93875bd +Author: Keith Dao +Date: Sat Oct 16 06:31:55 2021 +1000 + + Changed starting epoch to default to 1. + +commit f50625b215c7cf249b7aa7dae968edef41e21240 +Author: Keith Dao +Date: Sat Oct 16 06:06:50 2021 +1000 + + Fixed loss history plot having the epoch axes be overfilled with values. + +commit 815b635be7db9b134b5165fc195d7fcea603b079 +Author: Keith Dao +Date: Sat Oct 16 05:57:04 2021 +1000 + + Added comment for how the epoch offset is affected. + +commit 5ad2aacee0f55d7e598d9b988cd0ac68203a6c74 +Author: joe86726 +Date: Fri Oct 15 14:19:19 2021 +0000 + + Gblock and MappingNet structure added + +commit e005e180c3d250131c1fdd9591e1bfaf128f5d2e +Author: Shravan Shivpuri +Date: Fri Oct 15 22:26:53 2021 +1000 + + Added data load and splitting mechanism. Utilizing pandas to make things easier. + +commit 68c55083565707f732cf51e95bb41fd61ca9a8b3 +Merge: 8eb741d2 faee2e79 +Author: Keith Dao +Date: Fri Oct 15 21:30:34 2021 +1000 + + Merge branch 'main' into topic-recognition since work was done on the + wrong branch. + +commit faee2e79cee287611da5f2317041494eecbd3fc8 +Author: Keith Dao +Date: Fri Oct 15 21:27:22 2021 +1000 + + Moved files to the correct directory. + +commit a23a601cd55b188777cadb96ad14e3f366e81090 +Author: Shravan Shivpuri +Date: Fri Oct 15 18:38:50 2021 +1000 + + Added standardization to pre-processing. Removed flip on all axes but 1 (left right only). Added additional warp augmentation. Added main method. + +commit ded7f1e02fcfb6f14971cf782c0bf58a6034afa6 +Author: Edward_Guilfoyle +Date: Fri Oct 15 17:25:59 2021 +1000 + + Implemented yoloLoss, and metric. Bug at compile on model (InvalidArgumentError) + +commit 158cf0e1f788bd857a8c15ea7d5fd81c901e7e9c +Author: Cherian John +Date: Fri Oct 15 16:59:19 2021 +1000 + + Fixed Bug in shapes sizes with network structure, created driver file called test.py + +commit c7eeeffe97e2551773f8256714958eaf900f72da +Author: leecwj <37468566+leecwj@users.noreply.github.com> +Date: Fri Oct 15 16:01:06 2021 +1000 + + driver: loading images from ISICs set + +commit 7e40367a93e2be4f689a2a52985f935d6eb75f98 +Author: Alex Patapan +Date: Fri Oct 15 15:43:58 2021 +1000 + + updated dependencies + +commit 0c96973db480f00aa50a81a1e90e4281e2926fcf +Author: Alex Patapan +Date: Fri Oct 15 15:41:31 2021 +1000 + + added to readme and some comments + +commit d7b32916fcd395a32a32a6b7589773f50d40cfcc +Author: Keith Dao +Date: Fri Oct 15 15:37:27 2021 +1000 + + Set epoch offset to 0 if weights are not loaded. + +commit 7db6c95c1cd203267371bc57fc4d57be5622a136 +Author: Keith Dao +Date: Fri Oct 15 15:33:00 2021 +1000 + + Updated header block. + +commit a42c97b85e7737b66d6794f6e12d3d98cb1bfa44 +Author: Keith Dao +Date: Fri Oct 15 15:32:38 2021 +1000 + + Added driver file. + +commit 769f5eab31f11b971355800a92d53f1ecfd45cba +Author: Alex Patapan +Date: Fri Oct 15 15:19:34 2021 +1000 + + updated image from png to jpg + +commit dda07101e01c9b5adf7e7280c0f552c7d4093f91 +Author: Alex Patapan +Date: Fri Oct 15 15:18:34 2021 +1000 + + added results images to readme + +commit 878a18edff6b07d292a64cc3caf3ef6f8eead85e +Author: Keith Dao +Date: Fri Oct 15 15:04:26 2021 +1000 + + Updated saving paths to include the time code. + +commit 1a3384b2c1a29a8847b827cd776df56be32ef1c3 +Author: wakahide23 +Date: Fri Oct 15 04:59:26 2021 +0000 + + upload colab.file from Colab + +commit 1d814bd36e52f4a09238df345836c2330597ce88 +Author: Keith Dao +Date: Fri Oct 15 14:28:20 2021 +1000 + + Updated last modified date. + +commit 356bff8b2502926f050d8341a1a23a4e2a16d102 +Author: Keith Dao +Date: Fri Oct 15 14:27:49 2021 +1000 + + Updated last modified date. + +commit 6e59fe2d7c7f54804ef8c7b9a353262d8015148a +Author: Keith Dao +Date: Fri Oct 15 14:27:17 2021 +1000 + + Added image saving intervals as a parameter. + +commit 099991ad62e81599148f9b767c563362fedf9f54 +Author: Keith Dao +Date: Fri Oct 15 14:15:13 2021 +1000 + + Added function to generate samples. + +commit b33fe7b2150d4c7a6b9b2e8a00064f5518ce38b5 +Author: Keith Dao +Date: Fri Oct 15 14:05:10 2021 +1000 + + Fixed calling the wrong value when printing loss summary for each epoch. + +commit 2ab616192e3cbf7dd7a4d4fe406342a859f1e89f +Author: Keith Dao +Date: Fri Oct 15 14:03:21 2021 +1000 + + Fixed error in calling loss function for the generator. + +commit b0ef08ba2c6885fdd0b2f0c1c330e461edb0471e +Author: Alex Patapan +Date: Fri Oct 15 14:00:59 2021 +1000 + + removed unnecessary relu's and added batch normalization. currently getting Dice similarity of 0.85 on test set. + +commit cad089d9baa72757ab64116f42cce1c6909544be +Author: Keith Dao +Date: Fri Oct 15 14:00:35 2021 +1000 + + Fixed passing the whole dataset rather than the batch. + +commit 203249da1dbf6e75d82bd20296c0dc7bfb8285be +Author: Ahmed +Date: Fri Oct 15 12:29:31 2021 +1000 + + code done + +commit 2a0a9a32b87a185d8b481f33da9ca6fe6938584f +Author: Alex Patapan +Date: Fri Oct 15 10:26:12 2021 +1000 + + fixed bug with dice coefficient calculation + +commit 0e184e78885082f65b464a8a144486f131ca97a6 +Author: Pritish Roy +Date: Fri Oct 15 10:10:42 2021 +1000 + + added sequential feed forward model with dense layers and dropout + +commit 6f5504e65505a87d9deaba652a8e9088b30f3165 +Author: Ahmed +Date: Fri Oct 15 07:43:32 2021 +1000 + + pos_encoding not working; should be good when i fix that + +commit ae470376a769e52c9f891120c6074307a6cc31db +Author: Korbin Daly +Date: Fri Oct 15 02:31:37 2021 +1000 + + added code + +commit e3272c499155897877c2658fab7046d6ce3dc872 +Author: Korbin Daly +Date: Fri Oct 15 02:27:24 2021 +1000 + + added readme + +commit e121b322f8bcb3fd1c9ebb49e69bee94743d246d +Author: Keith Dao +Date: Fri Oct 15 01:34:26 2021 +1000 + + Implemented loss history visualisation. + +commit 53d1b191c1adaa1398711f41768a01f64b78b3c9 +Author: Keith Dao +Date: Fri Oct 15 01:29:59 2021 +1000 + + Fixed invalid type hint. + +commit 3cf60470a3a56e31030dc6e65bef6934764addf7 +Author: Keith Dao +Date: Fri Oct 15 01:15:02 2021 +1000 + + Changed train return type to a tuple of the generator and discriminator losses. + +commit 6002b0a25712684b4b55effec7cd119cfe421b09 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Fri Oct 15 01:10:22 2021 +1000 + + Create test.py + +commit 912689f7d519325b4a1df7b798953dfe56d128c7 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Fri Oct 15 01:08:33 2021 +1000 + + Delete 45464948-ISICs-UNet + +commit 99596478589637b1ee6e935a014220f5c13eb956 +Author: unicorn10086 <32724306+unicorn10086@users.noreply.github.com> +Date: Fri Oct 15 00:53:51 2021 +1000 + + Create 45464948-ISICs-UNet + +commit a1b4aa5efd1a1b2b09e4b8c451ec20e7c31558aa +Author: Keith Dao +Date: Fri Oct 15 00:49:50 2021 +1000 + + Updated visualise_images to take Tensors rather than a Dataset. + +commit 0813d00487dd536343a9cd53754de91dd0dd5da3 +Author: Keith Dao +Date: Fri Oct 15 00:33:10 2021 +1000 + + Fixed incorrectly calling epochs rather than total_epochs. + +commit c0598db6237a3629046744e6447977516e60e8b1 +Author: Keith Dao +Date: Fri Oct 15 00:31:55 2021 +1000 + + Update parameter name to be more accurate. + +commit b9bcd716bd273d3e9219592477350eebff1d93b4 +Author: Keith Dao +Date: Thu Oct 14 23:58:50 2021 +1000 + + Updated weight saving path. + +commit 49323a60d1032fa7833baa4319727bccf5d8c7d4 +Author: Keith Dao +Date: Thu Oct 14 23:36:52 2021 +1000 + + Changed load_images to take image_size as an integer. + +commit 3a28d89b3a45865858e8e346216683ad51235e9b +Author: Keith Dao +Date: Thu Oct 14 23:08:56 2021 +1000 + + Updated parameter name of get_optimizer. + +commit 87b00a25cb1cc3e7d42295bf9ee613d90b39fbd0 +Author: Keith Dao +Date: Thu Oct 14 22:38:06 2021 +1000 + + Added optimiser generation function. + +commit 29bb0e5cdbe3985ef244da0ef20ab0e0fef8769e +Author: Keith Dao +Date: Thu Oct 14 21:51:28 2021 +1000 + + Fixed weight saving path not accounting for epoch offset. + +commit 7dee012930a9818d5c06d6e2c812243fdde927d3 +Author: Keith Dao +Date: Thu Oct 14 21:50:23 2021 +1000 + + Removed unnecessary requirement from header block. + +commit ca6b49929addcd9308e69d1393238613ceb420c6 +Author: tomdx +Date: Thu Oct 14 19:55:42 2021 +1000 + + Create main file + Create load_data file + Implement loading AKOA knee dataset into a tfds object, with labelling + +commit 3cc31c9bd17a41eb8e2630334f973f82d47d2887 +Author: Keith Dao +Date: Thu Oct 14 19:48:18 2021 +1000 + + Implemented training functions. + +commit ab9d4c8d15cef247417463a67482e899c331d816 +Author: Keith Dao +Date: Thu Oct 14 19:35:36 2021 +1000 + + Updated get_discriminator to not change the value of image_size. + +commit a2ef6df4a2bdd911a3d2fb1c2bc5fc7910f11f80 +Author: Keith Dao +Date: Thu Oct 14 19:32:37 2021 +1000 + + Made number of filters a parameter when creating the models. + +commit 6d09908358ad9d9a43e3df11d0a68ab1dbd1f683 +Author: Pritish Roy +Date: Thu Oct 14 19:31:22 2021 +1000 + + gitignore file added and load processed dataset + +commit 38458b62568d71920b7914d3a2a5253968a079b0 +Author: Keith Dao +Date: Thu Oct 14 19:24:50 2021 +1000 + + Fixed incorrect type hint in model generating functions. + +commit a0524adbbfbb20e07d7f6c70a1fff70b516fe0ab +Author: Pritish Roy +Date: Thu Oct 14 19:26:10 2021 +1000 + + patches plot added in figures folder + +commit 2477e32088cfbd7294993c773844d1f3b9e5335a +Author: Pritish Roy +Date: Thu Oct 14 19:25:16 2021 +1000 + + visualise extracted patches from the dataset + +commit fd4f06f00a225c87f7e6291ce52f2493aeb57a63 +Author: Keith Dao +Date: Thu Oct 14 19:24:17 2021 +1000 + + Fixed incorrect type hint in model generating functions. + +commit 7e9a21fea6e9bfbbd78a7bec6d58d3537d38b709 +Author: Pritish Roy +Date: Thu Oct 14 19:12:57 2021 +1000 + + data augmentation feature added for better anticipated model performance + +commit 2296b256f7a4b89496c3303f2e540a48ea4ca337 +Author: Keith Dao +Date: Thu Oct 14 18:16:45 2021 +1000 + + Added train.py with loss functions. + +commit 9a0ee3d20854ae3f5f25fe5a7e4e4eb1333e06f8 +Author: Keith Dao +Date: Thu Oct 14 17:49:32 2021 +1000 + + Updated header block. + +commit aa043c85ed05963cf68fe66ee653abbbe7c5079b +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Thu Oct 14 17:42:20 2021 +1000 + + The style generator, and synthesiser networks now compile, and function + +commit 9e9a74ea0fb3b3457ca3b5e05eb0f6c503bef8cb +Author: Keith Dao +Date: Thu Oct 14 17:35:49 2021 +1000 + + Added compilation of the generator and discriminator. + +commit 7b7e8fccb912c417f4e072c647653d97ed35b07b +Author: Keith Dao +Date: Thu Oct 14 17:34:00 2021 +1000 + + Removed print statement in get_discriminator. + +commit 230b7523921e413887c0a98f2fb055d2f19638a4 +Author: Cherian John +Date: Thu Oct 14 17:10:41 2021 +1000 + + Fixed some bugs in Improved_Unet.py + +commit b54d9099a9fe6ffa1fa2e509fe18023bed6ee330 +Author: Cherian John +Date: Thu Oct 14 16:49:20 2021 +1000 + + Completed unet network building class + +commit 41d2e956d21858641028ea69d50b2bb3b18af6e2 +Author: Keith Dao +Date: Thu Oct 14 16:46:22 2021 +1000 + + Implemented get_discriminator. + +commit 6b0a72f8acf9789b58d57e1e5a05612ec97a13fb +Author: Mr Zhuoxiao Chen +Date: Thu Oct 14 16:21:54 2021 +1000 + + Rename the train.py to main.py; add another .gitignore to the folder of my work + +commit fec351e441ddb48659946110a030a6422ebe6ec4 +Author: Edward_Guilfoyle +Date: Thu Oct 14 14:44:56 2021 +1000 + + Work in progress. Fixed Data-preprocessing + +commit 83d72667694b2932c640bcea46d076e0c4ce7ce9 +Author: Edward_Guilfoyle +Date: Thu Oct 14 12:54:08 2021 +1000 + + Continue working on yolo model. Data preprocessing broke !>?!>@>!!>@>@ + +commit 961da3732dd375f86e530f84c4dbe0a7044d3bd0 +Author: Alex Patapan +Date: Thu Oct 14 11:38:27 2021 +1000 + + add shuffle + +commit 86eef6c81eae2eb5da6c4b622ba6e5ea818fc5b0 +Author: Alex Patapan +Date: Thu Oct 14 09:29:21 2021 +1000 + + added to readme and updated epoch and batch size. Also went back to binary cross entropy loss function + +commit 23a3ffdf96c3b74ff985cd5115a2e2febbac2b9a +Author: Keith Dao +Date: Thu Oct 14 09:28:40 2021 +1000 + + Added layers to generator to make sure the input the synthesis network is constant. + +commit 58bf465d8f45af268654dd8ef39481e0a622a7da +Author: Keith Dao +Date: Thu Oct 14 09:27:37 2021 +1000 + + Fixed not reducing filters when upscaling resolution. + +commit dcfd5c412b80e162ec2a3534ea119e8396646c53 +Author: Ahmed +Date: Thu Oct 14 07:27:06 2021 +1000 + + method for importing database is complete bollocks + +commit 11a2876a07767cacbaf546b8c397234a8db6e23c +Author: Alex Patapan +Date: Thu Oct 14 07:20:39 2021 +1000 + + added more detail to readme + +commit 763846371d2a659ef5124e91f8157eda940a6c48 +Author: MujiDipto +Date: Thu Oct 14 03:59:27 2021 +1000 + + Added CC license for the work + +commit 7a95de4a2da6f6bbb13243417d87014a897dbf21 +Author: MujiDipto +Date: Thu Oct 14 03:54:48 2021 +1000 + + Update README.md + + Updated for topic-recognition branch + +commit c47428bc6a254e62a40e9adec67fae53e34f2f60 +Author: leecwj <37468566+leecwj@users.noreply.github.com> +Date: Wed Oct 13 21:02:28 2021 +1000 + + built "improved u-net" from https://arxiv.org/abs/1802.10508v1 + +commit 8f2fee3ab4e89527375048a765eaa4492447dccb +Author: Keith Dao +Date: Wed Oct 13 20:14:58 2021 +1000 + + Implemented get_generator. + +commit 536e92fbee02f995c5a56ea0b14648076c9c1400 +Author: Keith Dao +Date: Wed Oct 13 20:14:05 2021 +1000 + + Added toggleable upscaling for generator block creation method. + +commit eff2154655bdce4c7ee6035b1fef6d132f2299e6 +Author: Keith Dao +Date: Wed Oct 13 20:12:58 2021 +1000 + + Fixed error in AdaIN.build. + +commit 85b064f6cd3f2b95ce7278bc2ef7938a9f4d02db +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 13 17:52:14 2021 +0800 + + Create Improved Unet model + +commit 132747f5ff24d1812a22af5a663aa88ac0026a90 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 13 17:47:06 2021 +0800 + + Add author + +commit 776d43f8b457e56921ac2ecde58b905a11a93d54 +Author: uououo +Date: Wed Oct 13 17:46:26 2021 +0800 + + correct the syntex error and the gramma errors + +commit 624d4ee68ebff91bbc2f21f05e34fceb430ebf0b +Author: uououo +Date: Wed Oct 13 17:36:04 2021 +0800 + + add more details + +commit 765481db06882bb1f823f1dbeb13e00d50515957 +Author: uououo +Date: Wed Oct 13 17:34:31 2021 +0800 + + modify some layouts + +commit db9a4039e64ed0cd0fa18acc4fdb43a629d271a5 +Author: uououo +Date: Wed Oct 13 17:30:35 2021 +0800 + + add more instruction and explanation + +commit f5aff65e91f58909324b8d87cf2980d42915cf71 +Author: uououo +Date: Wed Oct 13 17:30:10 2021 +0800 + + add the formula image + +commit 1b0bfd19fede57a47af173758196eacf6914064b +Author: Mr Zhuoxiao Chen +Date: Wed Oct 13 19:23:51 2021 +1000 + + Fix .gitignore to stop uploading datasets to the GitHub Repo + +commit 2c3bcecbea640af845afe02b38fb68b4880c1352 +Author: Mr Zhuoxiao Chen +Date: Wed Oct 13 19:18:44 2021 +1000 + + Add .gitignore to stop uploading datasets to the GitHub Repo + +commit 3fd7a6f7f076d924345801b9a8d76ec07b2dc054 +Author: ltaylor231 +Date: Wed Oct 13 18:55:47 2021 +1000 + + Added image loading to build.py, added basic infrustrucure to model.py. + +commit 82199ac081c2ce7c0d6a08a2e0c30830c6e2988f +Author: Keith Dao +Date: Wed Oct 13 18:44:56 2021 +1000 + + Added discrimator block creation function. + +commit 3803541e6419f910ea093b74548ab4d52f10fc25 +Author: Keith Dao +Date: Wed Oct 13 18:43:23 2021 +1000 + + Updated gen_block docstring to better reflect the layout of the block. + +commit deb0ddfd3f0a75edfe43ccdbe911ebcd7032a44d +Author: Keith Dao +Date: Wed Oct 13 18:35:57 2021 +1000 + + Added generator block creation function. + +commit ee397c9f28ccafd194336ed634f50b53a871b1bd +Author: Keith Dao +Date: Wed Oct 13 18:35:14 2021 +1000 + + Fixed incorrect type hint for build method of AdaIN. + +commit f2e5d8f58f114c9512f4e5faf7d1b93720b4594e +Author: uououo +Date: Wed Oct 13 16:30:19 2021 +0800 + + add more comments + +commit 2d8ff702c789a11fbf86a32afeeae51d2a50b6ad +Author: uououo +Date: Wed Oct 13 16:09:24 2021 +0800 + + add more information for instruction + +commit d159b259e0894fb0b4936d0e8fdb4f837942af52 +Author: ltaylor231 +Date: Wed Oct 13 18:08:30 2021 +1000 + + added initial build, model and README files. + +commit 36e4f3fe92fa06ef563dd43c3bd6b1149e93f6b2 +Author: uououo +Date: Wed Oct 13 16:06:01 2021 +0800 + + this version can run on the jupyter + +commit 1a7d63694e77f08271e20be42d3b07d3bd62abe1 +Author: uououo +Date: Wed Oct 13 16:05:35 2021 +0800 + + this version can run on jupyter + +commit 7a137568ec75557d52ee77560ec0ef259a74cfb0 +Author: Keith Dao +Date: Wed Oct 13 18:00:55 2021 +1000 + + Added type hinting for AdaIN methods. + +commit 22acb0773127376761d290805fe19b93f77bfce4 +Author: Keith Dao +Date: Wed Oct 13 17:41:18 2021 +1000 + + Created the AdaIN layer as a Layer. + +commit e50a8dbc3beff7b928fff03eb2faf9b0d7a53ac8 +Author: Keith Dao +Date: Wed Oct 13 17:35:23 2021 +1000 + + Fixed incorrectly naming get_discriminator as get_generator. + +commit 17410530c84b28a8429a2df57d1e2c3f451d5ce7 +Author: Keith Dao +Date: Wed Oct 13 17:34:02 2021 +1000 + + Added basic structure of gan.py + +commit afe0e5736dc9d0482bd484a08b16a78833fcd96b +Author: Alex Patapan +Date: Wed Oct 13 17:30:14 2021 +1000 + + removed old VQVAE main and model + +commit d994efe7d02d31f42df1cdf9d63616dddc8a7a1f +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 13 15:27:50 2021 +0800 + + Preprocess data and plot some examples + +commit 59e584e9c671d418a02d055cc8d021998d191d1a +Author: uououo +Date: Wed Oct 13 15:25:57 2021 +0800 + + correct the gramma error + +commit e208e308c85b7bab2a68e4efbb3f9d1b05874a91 +Author: uououo +Date: Wed Oct 13 15:25:29 2021 +0800 + + correct the name of images + +commit c11fb987957bccb05dd82d04870f64f6ab871cb4 +Author: Alex Patapan +Date: Wed Oct 13 17:25:02 2021 +1000 + + fixed up dice coefficient function + +commit 8f58a11869b0a8c0d05effdccd6f5856576e5f46 +Author: RichardMarron0 +Date: Wed Oct 13 17:19:29 2021 +1000 + + Added loss functions to discr. and gen. models + +commit 62c943ac0715ab2cfe73acbc28edb8a263df88fd +Author: uououo +Date: Wed Oct 13 15:17:14 2021 +0800 + + update more images + +commit 2a640b02bed2b02517d64fbd328a54eb9c547f21 +Author: uououo +Date: Wed Oct 13 15:05:31 2021 +0800 + + correct gramma mistakes + +commit 8fc5d7a53c6a97af0c2f64690f73c784831f67cb +Author: uououo +Date: Wed Oct 13 15:04:41 2021 +0800 + + update explantion for readme file + +commit 3ddfc2d2efe2c71a3177928a370dac2f7ff6a975 +Author: uououo +Date: Wed Oct 13 15:03:45 2021 +0800 + + add more comments + +commit cd405770ac87987282a6269318524a165493af9d +Author: uououo +Date: Wed Oct 13 14:58:10 2021 +0800 + + change the training loops to be 60 + +commit 47d572d3bf6173a7bf835522d01792394ffb22af +Author: uououo +Date: Wed Oct 13 14:55:40 2021 +0800 + + update the result images + +commit f18102d38e3ef2c63dd964a8d75080c72f59aacc +Author: uououo +Date: Wed Oct 13 14:46:18 2021 +0800 + + update the readme file + +commit 639c0302542ee0957813b6642f8622a8a0da167b +Author: uououo +Date: Wed Oct 13 14:42:00 2021 +0800 + + update the result images + +commit d549242a8c3f44b20652e730053b7d06cee12202 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Wed Oct 13 14:22:49 2021 +0800 + + Implement function to load data + + Additional function to load data locally, so that data can be loaded as a "npy" file + +commit 1cfc111c108fce5fe0486ad7526d049e2149bc8e +Author: Keith Dao +Date: Wed Oct 13 15:26:06 2021 +1000 + + Added a baisc README. + +commit e809356ffe4402a96b5f680a760744b2b6ce57d1 +Author: Mr Zhuoxiao Chen +Date: Wed Oct 13 15:22:41 2021 +1000 + + Add initial Pycharm files by Zhuoxiao + +commit ddb2cc4842bfa158455fca8cf52aba874ab5846c +Author: Mr Zhuoxiao Chen +Date: Wed Oct 13 15:17:35 2021 +1000 + + Initial commit by Zhuoxiao. + +commit 818c81a605e6d60081875eda4565d1948cdd3403 +Author: Keith Dao +Date: Wed Oct 13 15:11:36 2021 +1000 + + Added image loading and visualisation functions to util.py. + +commit 4c495f71f59defb0bb2d28e1e409e118ab118905 +Author: uououo +Date: Wed Oct 13 13:10:47 2021 +0800 + + decrease the training loops + +commit 5011d441d7cc9c47670a540516bbe72ac1222e6b +Author: uououo +Date: Wed Oct 13 13:07:50 2021 +0800 + + update the newest DSC graph and its loss graph + +commit adc96d6ff4ad058b96d037a68b7fb9ab690303ad +Author: Edward_Guilfoyle +Date: Wed Oct 13 14:57:00 2021 +1000 + + Outputted new images & bounding boxes. Onwards too MODEL :)!!! + +commit 97c1c1668852fd6351c7fd7d3043727ba2e2b619 +Author: uououo +Date: Wed Oct 13 12:50:14 2021 +0800 + + correct gramma error in readme file + +commit 53e4492207bae9a515993918c2d502c4b1171645 +Author: Alex Patapan +Date: Wed Oct 13 14:42:15 2021 +1000 + + restructured initial data processing + +commit e1eb64e1efecd2a5c59347594c69eef44a3e5d47 +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Wed Oct 13 13:59:10 2021 +1000 + + Separated VQ layer from the encoder to more easily calculate latent loss, fixed calculation of loss that prevented backpropagation. Added train step and generated preliminary reconstructions + +commit b0b2826660459404c4e5ded4243235af51b029b4 +Author: johnvparsons99 <62982818+johnvparsons99@users.noreply.github.com> +Date: Wed Oct 13 13:28:21 2021 +1000 + + Created dummy adjacency list and converted it into a scipy Sparse Matrix in model.py. Need to switch to tf.SparseTensor to proceed with tf.sparse.sparse_dense_matmul. + +commit aa4d11df2c552ccc906807e13e1de63a9d672fbe +Author: Edward_Guilfoyle +Date: Wed Oct 13 12:53:11 2021 +1000 + + Sucessfully calcaute bounding boxes + +commit 1814f9bc4ef7863799db6587a6807f8c7b286814 +Author: Yousif +Date: Wed Oct 13 12:17:21 2021 +1000 + + Added initial models for Encoder, Decoder, VQVAE + + Code clean-up: Removed unnecessary code from VAE of prac2. + Added Encoder model (this involves the initial network and the model summary. + Added Decoder model (this involves the network and the model summary) + Added VQVAE model (this involves both Encoder and Decoder layers with the custom layer of the vector quantizer which is to be implemented at a later stage. + Added simple print statement for printing the original and reconstruction of the images. + +commit aad062143b791a3fbe0df99b174eb62edead3c37 +Author: joe86726 +Date: Wed Oct 13 02:16:32 2021 +0000 + + AdaIN and PixelNorm built + +commit bf8de64c909159e48c21a46088d5e17cf354ed6c +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Wed Oct 13 11:16:59 2021 +1000 + + implemented ModConv2D layer from tf 2.x implementation of StyleGAN2 + +commit 1fc708d0136151f92dc8048e13768999e515a6da +Author: Alex Patapan +Date: Wed Oct 13 11:07:37 2021 +1000 + + completed dice coefficient section + +commit 12ca6eab9ceac062e45e526a159e35eb74be93e2 +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Wed Oct 13 10:51:53 2021 +1000 + + Modified Vector Quantizer layer to allow proper initialization of uniform prior p(z) and back-propagation via straight-through estimation. Also added latent loss function + +commit 387e66e92de65dc29319056ab0579478739a75e0 +Author: Edward_Guilfoyle +Date: Wed Oct 13 10:30:08 2021 +1000 + + Fixed import issues. Images reshaped, start working on bounding boxes + +commit ed22c98aadc608d60de6a2379e5e0d8ebc37989d +Author: JoeHolownia +Date: Wed Oct 13 10:26:00 2021 +1000 + + Added readme file + +commit 12c17fcfbaf06f79acf03db0c370bdaa8d869fd8 +Author: JoeHolownia +Date: Wed Oct 13 10:06:46 2021 +1000 + + Initial commit, setting up repo + +commit 49a5e007090664ec2a2f46955aac559baaa08a15 +Author: Zhien Zhang +Date: Wed Oct 13 09:53:41 2021 +1000 + + Add setup.py + +commit 54c0e73bddb9fd45a3de255ffc15dc0ba6ec7305 +Author: Robert +Date: Tue Oct 12 23:46:21 2021 +0000 + + Added basic VQVAE without skip connections + +commit cce569702bb9b444f9f9b8f1129b20006e2e5dca +Author: Ahmed +Date: Wed Oct 13 09:41:53 2021 +1000 + + technically train, but really not well; batches still not working + +commit c064c0d97d1cc64ca046d5b10083687b4fda05de +Author: Mark Coulon +Date: Wed Oct 13 09:39:34 2021 +1000 + + Added the processing of data in UnetData and added a basic driver function + +commit 0db696cea0577fb3dc77f691750bf3ea3544904f +Author: Alex Patapan +Date: Wed Oct 13 09:38:10 2021 +1000 + + finished dice coefficient function + +commit 00340a4a01307025102e087b58cb1de40cfb080c +Author: Mallika Mukherji +Date: Wed Oct 13 09:32:01 2021 +1000 + + Deleted vqvae.ipynb and added vqvae_model.py + Added importing vqvae_model.py to driver_script.ipynb + +commit 0c47d7bec7e39e521926d471c763af9317b67118 +Author: Alex Patapan +Date: Wed Oct 13 09:22:03 2021 +1000 + + started working on dice coefficient function + +commit a2fde2cdc1d5fa074ab3750093805fc0ad6e92b1 +Author: Mallika Mukherji +Date: Wed Oct 13 09:12:27 2021 +1000 + + Modified data loading and processing to be more compatible with VQVAE model by + using numpy arrays. + Added calculation of data variance. + Modified displaying of images to visualize both training and test data. + +commit 6fcadbf243c373ff3fcda63d53efdc3978c9cb47 +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Wed Oct 13 07:23:39 2021 +1000 + + Added in quantization of the encoded vectors, and removed dense layers + +commit 7c92bafec741e9410fa6d84dacaa084c41f3760b +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Wed Oct 13 06:15:08 2021 +1000 + + Added model.py - + scaffolds the encoder, decoder and overall vq vae network models. + +commit ea0610438b3ac901d53547299be2f14211549f29 +Author: Ahmed +Date: Wed Oct 13 05:58:41 2021 +1000 + + shape errors also being cause by not batching properly, still fixing + +commit 6bd66f95ba5257f31335f379b33c0454ab7c239d +Author: Ahmed +Date: Wed Oct 13 04:45:09 2021 +1000 + + model is now correct; running into memory erros though (time for batching) + +commit faa8005851b0a9aea938967bbecbc97d4a01893f +Author: johnvparsons99 +Date: Tue Oct 12 22:15:52 2021 +1000 + + Began parsing data by using np.load() to open the facebook.npz file. Now loading and printing a summary of the Pages and Features, Edges, and Target. + +commit 65195d7e1359428c9b99c2d69aab4341f55f40bf +Author: David Phun +Date: Tue Oct 12 16:56:57 2021 +0700 + + Fix README.md typo + +commit 80a2b3aefc80946a43b2224ede978fcf749f10a4 +Author: Ahmed +Date: Tue Oct 12 19:23:43 2021 +1000 + + debugggin build error due to float mismatch + +commit 0b5027a9345fd7de70c8b88f616052ed37b98f16 +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Tue Oct 12 16:58:04 2021 +0800 + + Create README.md + + Create a new folder with README.md + +commit 93f769ce36a5cc49217d723601b03eb54a138da4 +Author: Ahmed +Date: Tue Oct 12 18:31:29 2021 +1000 + + its gonna work now + +commit 238e51aca84b9436e7519a5b38e30cb60fa9578c +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Tue Oct 12 16:13:57 2021 +0800 + + Delete s4414800 + +commit 9ce9cfb962473edd4db7d99d1e4f69f624faa8dc +Author: PerryYin <61039100+PerryYin0302@users.noreply.github.com> +Date: Tue Oct 12 16:13:09 2021 +0800 + + Create s4414800 + + Add a start file + +commit bbb596a1d091d5f98dc0223c48b886ef753b0623 +Author: RichardMarron0 +Date: Tue Oct 12 17:56:47 2021 +1000 + + Changed name of module to fix import + +commit 9fd1a8fb51bb1c21afaf1ddd06beb51e9a64a8c6 +Author: RichardMarron0 +Date: Tue Oct 12 17:53:29 2021 +1000 + + Added image normalisation + +commit b91b7dca40ba26b86bcbe8df8dd744156f420d65 +Author: Edward_Guilfoyle +Date: Tue Oct 12 17:27:11 2021 +1000 + + Started working on data pre-processing + +commit a54a189e1b5a6c4e4d35c72a5c73389fa160ef4f +Author: Richard +Date: Tue Oct 12 16:45:34 2021 +1000 + + Added gif creation function to show samples + +commit 88eaed5f1c9232d4f08b94081aa90199b54df135 +Author: RichardMarron0 +Date: Tue Oct 12 15:55:43 2021 +1000 + + Tweaked processing to use tensorflow + +commit 183b0889f46265d42558c2e5244f3cb96d3e86f3 +Author: Richard +Date: Tue Oct 12 15:47:21 2021 +1000 + + Sample processing into 4D matricies + +commit b9f4bf2fa99572b25f616f188c3f2143c7184b6d +Author: RichardMarron0 +Date: Tue Oct 12 15:08:50 2021 +1000 + + Switched to OASIS dataset + +commit f16a94c40c12dfb367a65f8a53c9f47079257155 +Author: uououo +Date: Tue Oct 12 11:45:03 2021 +0800 + + change the layout of readme file + +commit fc4317457745c55f3c374956d4d74d28e6b461cc +Author: uououo +Date: Tue Oct 12 11:43:42 2021 +0800 + + update the readme file to show results images + +commit 84a133a1fb33c4e80fd6afb4dbc2ec7dcd5f2b36 +Author: uououo +Date: Tue Oct 12 11:29:36 2021 +0800 + + upload all result images in a folder + +commit b43c4189649e0f1072daf6765bf9211bbf7274af +Author: uououo +Date: Tue Oct 12 11:28:12 2021 +0800 + + update the compile,train and graphdisplayfunctions + +commit 2b264892631634aed19b7379fa49c751fe7c5d5b +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Tue Oct 12 12:36:19 2021 +1000 + + implemented discriminator model from the tf 2.x implementation of the StyleGAN2 + +commit 764dc2e87a958db57728e7b082743fe22109e9fb +Author: uououo +Date: Tue Oct 12 10:03:52 2021 +0800 + + upload the improved unet model + +commit 04e048a3968f659ef8daebad1185b4b83096444a +Author: Richard +Date: Tue Oct 12 11:36:01 2021 +1000 + + Added header docstring + +commit 8180377149fd4bec275cb4160f145757fefa2502 +Author: Richard +Date: Tue Oct 12 11:28:04 2021 +1000 + + Added module with model deinitions + +commit ee0cd4aa7b670b5ea17430317d01df9d2c15f95a +Author: Pritish Roy +Date: Tue Oct 12 11:25:43 2021 +1000 + + add folder structure, requirements file and split dataset into test train + +commit 1589eff5ad3d220f6ae4130d443367e88da5cffb +Author: Ahmed +Date: Tue Oct 12 05:54:10 2021 +1000 + + fixed loading data shape bug + +commit bcbad9200b79ab5f15152ce91dc9df76cc41a565 +Author: Ahmed +Date: Tue Oct 12 05:32:23 2021 +1000 + + fixed bug by removing everything; time to slowly reintroduce until bug is fixed + +commit 2176f7d667ebb7be966eb987d02381a3921ce863 +Author: joe86726 +Date: Mon Oct 11 15:59:02 2021 +0000 + + weight scaled conv built + +commit 66f703ea5e8e039a3a70e03a5ff71294a8bc1127 +Author: Anthony North +Date: Tue Oct 12 00:06:08 2021 +1000 + + pre assign patient ids to splits + +commit 79b4617871b8a6dd3d0242782eb40b3fa42c1d08 +Author: joe86726 +Date: Mon Oct 11 12:09:01 2021 +0000 + + load data + +commit 3cc63f390422e329f8ed6547969b1ed738ee2404 +Author: Ahmed +Date: Mon Oct 11 19:37:12 2021 +1000 + + made attention network have better connection layers; previous bug still not fixed + +commit f2519d5084d6c73e20ec76a1342b164cbe55e35c +Author: Ahmed +Date: Mon Oct 11 17:28:02 2021 +1000 + + fixed all syntax bugs + +commit c3450b8b70c60511eeae60c7a65292cd195fc5bb +Author: Alex Patapan +Date: Mon Oct 11 17:08:18 2021 +1000 + + setup train test and val datasets correctly + +commit 2f65a16bfffbdc998b733de4d2b6807b3fc2816f +Author: Yousif +Date: Mon Oct 11 16:31:37 2021 +1000 + + Converted to python file, added encoder and decoder + + Converted the jupyter notebook to python program and added encoder and decoder models to the program to compress the images and decode the compressed images + +commit a07871c6c64e7dce281e91b82f328cc0af1d549c +Author: Alex Patapan +Date: Mon Oct 11 16:08:08 2021 +1000 + + removed unnecessary comments and cleaned up img importation + +commit b476ad4c3212f29452fbca343459e65117864e85 +Author: uououo +Date: Mon Oct 11 12:52:18 2021 +0800 + + change layout + +commit 1c75ffa5b26c5d7651df401fdd481e941c0f22c8 +Author: uououo +Date: Mon Oct 11 12:47:10 2021 +0800 + + update the license file1 + +commit 06a4d9a39ff92e2b6fabdd31c0697404f9a98cc6 +Author: uououo +Date: Mon Oct 11 12:34:34 2021 +0800 + + update difference between unet and improved unet + +commit d73beaad5bad2773a4b065b35292dc929ea6a50c +Author: Ahmed +Date: Mon Oct 11 13:46:54 2021 +1000 + + fixing code bugs + +commit acb16210813c56bbcb9f466ba34e18ec5e50d036 +Author: NhatHuyNguyen +Date: Mon Oct 11 10:37:15 2021 +0700 + + add main() function + +commit f25390451dea35b4c3617ecf177ecb5c5cef78f9 +Author: Ahmed +Date: Mon Oct 11 13:02:19 2021 +1000 + + finished perceiver class + +commit a90b9289fa89572d8509d1f8c8ab65840b5c933f +Author: Ahmed +Date: Mon Oct 11 08:48:22 2021 +1000 + + made perceiver class + +commit 5acbe111d2591455c046f4d0600d21f4034e3b29 +Author: leecwj <37468566+leecwj@users.noreply.github.com> +Date: Sun Oct 10 23:24:02 2021 +1000 + + created method to build u-net of arbitrary width/height/level + +commit 69663ac46135d9b440818c7b6f35b7e0f6147646 +Author: Carrick Cai <55621126+CarrickC@users.noreply.github.com> +Date: Sun Oct 10 21:54:31 2021 +1000 + + Create README.md + +commit 7b79c53f8d3e0a1d1205dda3248ec796229b8a97 +Author: leecwj <37468566+leecwj@users.noreply.github.com> +Date: Sun Oct 10 21:04:39 2021 +1000 + + fixed problems with u-net skip connections + +commit 8e6a9be1767e5d89a0a92769f3a744c967a34ae5 +Author: Cherian John +Date: Sun Oct 10 20:55:10 2021 +1000 + + Mostly built model's network architecture, needs supervision integration and softmax + +commit 6c71fc3cb7eab09d585bc7ba77a7b86d54c4d30c +Author: Shravan Shivpuri +Date: Sun Oct 10 19:41:52 2021 +1000 + + Added pre-processing function + +commit cd186f227566ac4a591a9808bd32af6b0d7509e9 +Author: Anthony North +Date: Sun Oct 10 19:15:54 2021 +1000 + + dataset splits doco + +commit 372afb0332b10cdc2bfaa56c4cf00230083cd26d +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Sun Oct 10 17:13:23 2021 +1000 + + changed to the brain dataset for simplicity + +commit 5b2b4a7ccd707194bed88a56d9e64a14ccf3d888 +Author: leecwj <37468566+leecwj@users.noreply.github.com> +Date: Sun Oct 10 16:53:54 2021 +1000 + + reduced code duplication in model definition + +commit b4fb03cde55ae517ef788d340c243812a7da301d +Author: Anthony North +Date: Sun Oct 10 16:23:15 2021 +1000 + + add splits to aoi_akoa dataset + +commit b4489e49c8e8d96793a05b694a76f43a50fe78aa +Author: johnvparsons99 +Date: Sun Oct 10 16:12:22 2021 +1000 + + Added initial main function and imported tensorflow to ensure that the project Python interpreter is working correctly. + +commit 3b5bbd8671742d76067de1c31236ce109a6ad9ad +Author: johnvparsons99 +Date: Sun Oct 10 16:02:18 2021 +1000 + + Initial Commit. Created 44802020_facebook_gcn folder to contain project and added main.py (which will contain th driver script) and model.py (which will contain the model itself) to the folder. + +commit 26a008cbbcbdf9039990f30ec8b364ddf61d721a +Author: Ahmed +Date: Sun Oct 10 14:21:56 2021 +1000 + + finished transformer network, working now on creating the model + +commit 658ab13197e2c6d91ce0580b30799b2986f2aa56 +Author: Ahmed +Date: Sun Oct 10 14:04:21 2021 +1000 + + made transformer network + +commit 235c6d0bad86481f8f382cbe478a079e11466067 +Author: Humphrey Munn +Date: Sun Oct 10 12:39:00 2021 +1000 + + fixed input glitch, trains but not learning + +commit f8d638c5d268977e55bf8ec4fcf9d442083529ad +Author: Anthony North +Date: Sun Oct 10 11:36:41 2021 +1000 + + rename folder: 46139896 -> an_perceiver + +commit 8f8f997edbf0794db970bc0655e3a7a1f67e147e +Author: Ahmed +Date: Sun Oct 10 10:27:37 2021 +1000 + + started cross attention module + +commit f6cc0b7139d5a329c7dea245b2b80871bea1849f +Author: Cherian John +Date: Sun Oct 10 08:19:08 2021 +1000 + + Compeleted Data loader, fixed performance issue with retrieving data + +commit ab6b2bac01e32839fecaf03ebf4b93a901b53823 +Author: Ahmed +Date: Sun Oct 10 07:31:36 2021 +1000 + + begun work on modules + +commit a01368ec1e40012daa9c4326c8edaf0d694401ed +Author: Humphrey Munn +Date: Sun Oct 10 01:41:42 2021 +1000 + + training code & bug fixes. has shape error input latent array. + +commit 587638d2c093ff8fc6392c9aa79dbc4fbdc0db86 +Author: Shravan Shivpuri +Date: Sat Oct 9 22:45:00 2021 +1000 + + Basic model defined (untested) but many supporting functions remaining. Driver not started. + +commit 042e3d2042384fad1bf9f36199337ac36abd434a +Author: Shravan Shivpuri +Date: Sat Oct 9 21:48:42 2021 +1000 + + Created and discarded sequential model - can't use concat. Partially re-created using Functional API. + +commit fce00dba88132630c0c5fa29d08cc8647a19c57b +Author: Ahmed +Date: Sat Oct 9 20:16:56 2021 +1000 + + positional encoding function working + +commit ebe591085ceda6800df79ce4b83e879a62e8d141 +Author: leecwj <37468566+leecwj@users.noreply.github.com> +Date: Sat Oct 9 16:16:46 2021 +1000 + + u-net structure defined + +commit 7facc1cbe3d686f5e71c413fee133fda69623023 +Author: Shravan Shivpuri +Date: Sat Oct 9 16:14:50 2021 +1000 + + Initial commit - Created project workspace and empty py files. + +commit e0a60e19298351f1ab1c0bd2159aed838985b1c7 +Author: Humphrey Munn +Date: Sat Oct 9 01:34:00 2021 +1000 + + perceiver tf model done, lamb optimizer and truncated initializer + +commit 438b0f94ae567ad9a9d9b32e51015d98f606496f +Author: Yousif +Date: Fri Oct 8 23:35:48 2021 +1000 + + Initial VQVAE including code from prac2 VAE + + The code contains code from prac2 VAE project but the current progress for the VQVAE is in the load_data function which contains the data splitting into train and validation sets. Additionally, changing the dimension of the data from tf.Dataset object to a flat images array. + other code is placeholder from prac2 for now. + +commit 828a08fe09a3ebf8d7e14c8dc7362b31cd8c3f61 +Author: Kristian Thomassen +Date: Fri Oct 8 20:45:15 2021 +1000 + + Add initial (mostly empty) README + +commit 259a7131b55a31b6250582ec180bd155016c4fda +Author: Kristian Thomassen +Date: Fri Oct 8 20:31:32 2021 +1000 + + Initial commit. Setup directory for OASIS VQVAE topic + +commit 5a8e703545b53c5398e03c55f35032f121f5d522 +Author: Rick W +Date: Fri Oct 8 17:10:47 2021 +1000 + + resize arrays to fit model + +commit 68cdb62e83156b2aef1b7f8930f7e821be8a299a +Author: wakahide23 +Date: Fri Oct 8 07:00:13 2021 +0000 + + test2 + +commit 1f0b1f9e912f9852bfaca99b55312b5c98723fd6 +Merge: d9ae2072 ff4c5b8d +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Oct 8 16:14:21 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/wakameds/PatternFlow into topic-recognition + +commit d9ae2072e122720092934dc35d362a4d46c9f228 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Oct 8 16:11:33 2021 +1000 + + upload dataloader + +commit ff4c5b8dd92e013a3190e52f5a6529bdc3319e65 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Oct 8 16:07:59 2021 +1000 + + Delete Musk_RCNN.ipynb + +commit bc87cffa71c20eee3c00e1e1f2b1923ef3584572 +Author: Cherian John +Date: Fri Oct 8 15:55:08 2021 +1000 + + Data Loader can now load and visualise data as tensors + +commit 0e8fc4fccc9bd4edbacfe31f94dfca2cddddbe0c +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Oct 8 15:43:29 2021 +1000 + + Delete recognition/s4633139 directory + +commit e7cd07189c74877c8a896379151b271459d26ed7 +Author: Ahmed +Date: Fri Oct 8 15:11:44 2021 +1000 + + f encoding not working + +commit b650d745a0903151ecef6afd32522d538ecf80c6 +Author: uououo +Date: Fri Oct 8 13:02:58 2021 +0800 + + context and locate modules for improvedunet + +commit b4991b8c3860d1f57a5cbbe684d6ac8d07236520 +Author: Cherian John +Date: Fri Oct 8 14:37:36 2021 +1000 + + Initial commit: Started notebook to test loading ISICS data + +commit d8715b0ebfa10462a6b30b5d7decf93a4aae95fd +Author: RichardMarron0 +Date: Fri Oct 8 14:20:10 2021 +1000 + + Initial Driver and Processing + +commit c0b32841337105f69d0ff05b842483213e53efab +Author: Rick W +Date: Fri Oct 8 13:21:27 2021 +1000 + + switch datasets to keras Sequence + +commit fef788398cb73bb44c17a50b7edc9f8b2101b602 +Author: Alex Patapan +Date: Fri Oct 8 12:53:10 2021 +1000 + + normalization layer + +commit 07558daf4214043ad3e0bbbe2022178b2a672472 +Author: Mallika Mukherji +Date: Fri Oct 8 12:05:07 2021 +1000 + + Added loading and pre-processing of OASIS brain data to driver_script. + +commit b670590614757a224e4fc545858934ccacda2875 +Author: Alex Patapan +Date: Fri Oct 8 09:48:46 2021 +1000 + + converted pandas df to tf dataset + +commit 9339c1a64f540aa428ab223c0c4ad13794d4d80e +Author: uououo +Date: Fri Oct 8 00:24:53 2021 +0800 + + resize the title + +commit 39d670b52d2518c9c6f99fb541b805892f52f992 +Author: uououo +Date: Fri Oct 8 00:24:09 2021 +0800 + + change the size of the title + +commit aa073ff4424fdee6b1b9fd205c1491334820221f +Author: uououo +Date: Fri Oct 8 00:18:48 2021 +0800 + + update dependcies + +commit ea51cb75b7fc0da79c032ec558699f99df6acf4d +Author: uououo +Date: Fri Oct 8 00:15:13 2021 +0800 + + modify the layout + +commit 9697a8fea58d6d1573d5a12e068826d0137ec502 +Author: uououo +Date: Fri Oct 8 00:14:19 2021 +0800 + + more instruction + +commit ce20028980aa254d91733a98e086fa076d5e2460 +Author: uououo +Date: Fri Oct 8 00:04:20 2021 +0800 + + modify the basic unet so it can run now + +commit 98a1d29cda4420ac66977cce2e2bf42670c282cb +Author: uououo +Date: Thu Oct 7 22:54:44 2021 +0800 + + add more instructions + +commit b8f469c5124734a2aaa987943aeefa98db1f4f66 +Author: uououo +Date: Thu Oct 7 22:52:20 2021 +0800 + + this is the basic unet model python file + +commit a6b6b7cc639891ae6a2178b4c9c4f09826b76e9b +Author: uououo +Date: Thu Oct 7 17:47:32 2021 +0800 + + prepare for the model section + +commit 940fc7d965fbb867ecbf526ed23234d2c13c90f2 +Author: uououo +Date: Thu Oct 7 17:42:27 2021 +0800 + + update reference section + +commit 745987757c0a1af9ef9a068c0a3ced1873b69144 +Author: uououo +Date: Thu Oct 7 17:40:41 2021 +0800 + + correct gramma errors + +commit 9310abc910e1cf9f5b69bcf2062bb792322b6447 +Author: uououo +Date: Thu Oct 7 17:39:15 2021 +0800 + + change the images and add instructions + +commit cb71c16cd132633a97c510afb705e03cdba7cba0 +Author: uououo +Date: Thu Oct 7 17:33:49 2021 +0800 + + upload the improved unet structure image + +commit 1d89d8bfd01581ba9e2f83d9379da21bf0dce50b +Author: uououo +Date: Thu Oct 7 17:23:39 2021 +0800 + + change the layout + +commit 517b08fffe6becb8412db6f7f10e1ec2a3135374 +Author: uououo +Date: Thu Oct 7 17:19:31 2021 +0800 + + correct some gramma errors + +commit c8828a4663dd054b905041ad568e3cf759c32b0e +Author: uououo +Date: Thu Oct 7 17:17:11 2021 +0800 + + add image explanation for readme file + +commit 5583d2c1f5b7f041be7593867dbfb4a91e97c10d +Author: uououo +Date: Thu Oct 7 17:15:26 2021 +0800 + + upload the improved unet sturcture image + +commit 942ef9f792092738a00e6211bd274695aef541ab +Author: uououo +Date: Thu Oct 7 17:06:11 2021 +0800 + + add:predication func,dsc, dsc loss,display func + +commit b8a4be22985d21c450fd97be8d6c2b1a7fc7d654 +Author: AnqiYan <781236437@qq.com> +Date: Thu Oct 7 16:38:01 2021 +0800 + + Changed some layouts and added some contents to the file + +commit 04a30df1a7c043401168191d30402d2fde55fdd4 +Author: AnqiYan <781236437@qq.com> +Date: Thu Oct 7 16:19:45 2021 +0800 + + Fixed display issue of the history + +commit 5e5fb4cd990fb1b8d729409826edcd70bba61339 +Author: AnqiYan <781236437@qq.com> +Date: Thu Oct 7 16:17:12 2021 +0800 + + Added metrics, some graphs nad formula into the file + +commit 5299297e233b34a27ea4a844ed1e5af03fe3319e +Author: uououo +Date: Thu Oct 7 16:17:01 2021 +0800 + + main.py update: get the sizes of input and ouput + +commit 5dc3dcff7e73355e80c8f070e6b10913a75483d2 +Author: AnqiYan <781236437@qq.com> +Date: Thu Oct 7 16:14:38 2021 +0800 + + Added some result images + +commit 23e676e214a3497a1cd8cc1e5462b9938e9ecf2e +Author: uououo +Date: Thu Oct 7 15:56:56 2021 +0800 + + add the codes for preprocessing all images data + +commit bfd1c031befd281dde5e0a16ea824fce9073c1c1 +Author: uououo +Date: Thu Oct 7 15:46:37 2021 +0800 + + update main.py with image process methods + +commit 3d2c6b9e8b8387d0ede7467e896e051588935bd3 +Author: uououo +Date: Thu Oct 7 15:44:08 2021 +0800 + + upload the model.py contains basic methods + +commit 293a28638dce32c216b8705eed9e2e6cefadf194 +Author: AnqiYan <781236437@qq.com> +Date: Thu Oct 7 15:37:57 2021 +0800 + + Modifed some structure of the file + +commit 85a05d0945e208dd4ee3ab31847a4e5ce725595b +Author: AnqiYan <781236437@qq.com> +Date: Thu Oct 7 15:32:21 2021 +0800 + + Modifed some structure of the file + +commit b5c52e86e1579bd71950ee9a8002782efa3e47bd +Author: Tony +Date: Thu Oct 7 16:32:54 2021 +1000 + + Normalise single image. Issues with whole dataset. + +commit bc2fdc1a70e80edd8a207c1ccb79787c4d942b35 +Author: Ahmed +Date: Thu Oct 7 15:01:23 2021 +1000 + + rewrote all the stuff i lost + +commit 882055dcbd3a5541438d390fbe4087a005e45d4d +Author: cristina1096 +Date: Thu Oct 7 04:47:47 2021 +0000 + + Create File + +commit 47aec301ae96880d7c24f07d2ca7bf589d02f85a +Author: Ahmed +Date: Thu Oct 7 14:03:30 2021 +1000 + + Revert "working on loading data with no leaks" + + This reverts commit 9d521d4e378e8899786ede7dad3c08984ca24ec7. + +commit d753cb6757f5533c951b2562ccf0f9cb74d128b9 +Merge: fb5db7e7 9d521d4e +Author: Ahmed +Date: Thu Oct 7 13:03:37 2021 +1000 + + fixed merge error + +commit fb5db7e7c40445df36e68fa62b7535242633c805 +Author: Ahmed +Date: Thu Oct 7 12:59:39 2021 +1000 + + saving data works + +commit 2040c3c499f0c92a5ae62756b8c7a9b72caf5863 +Author: AnqiYan <781236437@qq.com> +Date: Thu Oct 7 10:43:58 2021 +0800 + + Fix the display issue + +commit 4c884a00d7e97d98bef7c83ff8d3ff5cd2eb2e86 +Author: AnqiYan <781236437@qq.com> +Date: Thu Oct 7 10:41:17 2021 +0800 + + Added history result + +commit 44041465305b589fb48f3ed41978f2e834ea9c45 +Author: Tony +Date: Thu Oct 7 07:13:16 2021 +1000 + + First look at data. Plot images and labels + +commit 96fcbcf66f117c4f8375572c911b9ac99a1c55eb +Author: uououo +Date: Thu Oct 7 00:31:23 2021 +0800 + + add reference in readme + +commit 6db83d2cf8c44b9596a43a34e085734377553d7a +Author: uououo +Date: Thu Oct 7 00:29:59 2021 +0800 + + correct the structure of readme + +commit 1806eaaee00ac1f89b519d074a03a5e219c6f27f +Author: uououo +Date: Thu Oct 7 00:28:32 2021 +0800 + + update the instruction and guides + +commit 75fb88bb374995385c27d92e5ef622d3b677e6d4 +Author: uououo +Date: Thu Oct 7 00:02:36 2021 +0800 + + create the main.py file: init three datasets + +commit b55c1951e62eac48e7dc8e29665606271394f974 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Wed Oct 6 23:01:30 2021 +0800 + + delete the old version of improved model + +commit dc7d53121b482f917a7770c7025514b2ab1dd3c6 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Wed Oct 6 23:00:56 2021 +0800 + + delete photots they are useless + +commit 63b702c5ad7ea80313ac9ee22c22aa13e04de040 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Wed Oct 6 20:21:28 2021 +0800 + + because I don't want to do stylegan anymore + +commit 8db6b6de9fbda5cfed47d11d2b8ae105c0ad0aef +Author: uououo +Date: Wed Oct 6 20:18:40 2021 +0800 + + Upload the main improved UNET model python file + +commit c5c09de66c2fa12e2f4b08226d6f1775c831b9ad +Author: uououo +Date: Wed Oct 6 20:02:33 2021 +0800 + + upload the UNET basic picture + +commit 9d521d4e378e8899786ede7dad3c08984ca24ec7 +Author: Ahmed +Date: Wed Oct 6 21:08:04 2021 +1000 + + working on loading data with no leaks + +commit 698c4a4ef7d7bea234f8e8b4d713056a7a0c068b +Author: Anthony North +Date: Wed Oct 6 20:12:28 2021 +1000 + + add aoi akoa dataset + +commit d461a64c97a9f52485604d4dd9ffa79a628b56ab +Author: NhatHuyNguyen +Date: Wed Oct 6 15:28:36 2021 +0700 + + change documentation position in Perceiver + +commit da7a9a0d726d5f3779b76c1972eb6fcb62102f8d +Author: NhatHuyNguyen +Date: Wed Oct 6 15:25:55 2021 +0700 + + create documentation + +commit 53a34f100828e33cc5e2dfa4dcb6a9246167bfdf +Author: Mallika Mukherji +Date: Wed Oct 6 17:40:18 2021 +1000 + + Created initial directory and file structure + +commit 2be3c654ed4fc45956fd97b6f33b536afba18968 +Author: AnqiYan <781236437@qq.com> +Date: Wed Oct 6 14:44:20 2021 +0800 + + Added the Improved UNet diagram + +commit 1b23144576a6d2a4d4e112a9bb4d832ef3e8cc80 +Author: AnqiYan <781236437@qq.com> +Date: Wed Oct 6 14:43:41 2021 +0800 + + Add some demonstrations about the Improved UNet + +commit 722b64d6e6525cf37166ba2665e5d0736e47bad6 +Author: Alex Patapan +Date: Wed Oct 6 16:39:24 2021 +1000 + + fixed syntax errors and continued work on main function + +commit 7a38dd26cce497a28ca03e69699ddabe38a20300 +Author: Alex Patapan +Date: Wed Oct 6 15:40:49 2021 +1000 + + added more comments and data splitting + +commit da65a5f55d364ee5b8165d192c0a9974bc53a0b1 +Author: Alex Patapan +Date: Wed Oct 6 15:00:51 2021 +1000 + + added main notebook and context module layers + +commit b440e5397fd840915878492901c3b4930f528d53 +Merge: ad2ee250 a222f442 +Author: uououo +Date: Wed Oct 6 12:26:21 2021 +0800 + + Merge branch 'topic-recognition' of https://github.com/haoxiangzhang-45473771/PatternFlow into topic-recognition + +commit a222f4428e4ab6c4913b72feff1cad098bea9005 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Wed Oct 6 12:26:14 2021 +0800 + + Delete test + +commit 28914cb686bbc3479d82144b76ad0fed2fa6a3fb +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Wed Oct 6 12:25:53 2021 +0800 + + delete useless photos + +commit ad2ee250321f69223e29780ccae93e2d0de19195 +Merge: a19c3477 c8dd8ffe +Author: uououo +Date: Wed Oct 6 12:22:37 2021 +0800 + + Merge branch 'topic-recognition' of https://github.com/haoxiangzhang-45473771/PatternFlow into topic-recognition + +commit c8dd8ffe6a691f0fc188c9a7b6ce3428169e79a6 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Wed Oct 6 12:22:08 2021 +0800 + + Create test + +commit a19c347746c5a6dc30641992b98256bfc947e3c2 +Merge: cdf20fb7 b9f8dc24 +Author: uououo +Date: Wed Oct 6 12:19:08 2021 +0800 + + Merge branch 'topic-recognition' of https://github.com/haoxiangzhang-45473771/PatternFlow into topic-recognition + +commit b9f8dc2486a28a0d75e5424ddb3a9145d48a02b2 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Wed Oct 6 11:03:10 2021 +0800 + + Update the readme file to the UNET version + +commit 65ed50752a26400b281f0bf39440f55979cbe964 +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Wed Oct 6 12:44:10 2021 +1000 + + Code for loading of OASIS images into a useable Dataset complete + +commit 2e2a757ea4b55b2bac943ae90bef545e192e09c9 +Author: Zhien Zhang +Date: Wed Oct 6 12:12:52 2021 +1000 + + Initial commit + +commit c92f35ca0c721386db3940221d1a9fe4e11eee9c +Author: NhatHuyNguyen +Date: Wed Oct 6 09:01:25 2021 +0700 + + add dataset visualize + +commit 9ea628d2ff66e2abc8b3a1883089ab5ab2c866f6 +Author: NhatHuyNguyen +Date: Wed Oct 6 11:58:03 2021 +1000 + + new imgs + +commit b401d0a3a8305842f5f09c49485d3b9d2e0ca196 +Author: Alex Patapan +Date: Wed Oct 6 11:40:04 2021 +1000 + + segmentation layers added + +commit b9459471c33e7a68307a9747e68eb43ab153996e +Author: Anthony North +Date: Wed Oct 6 11:32:12 2021 +1000 + + add tensorflow packages + +commit 542a2bc1ce99634059d99a552519703875b68506 +Author: Alex Patapan +Date: Wed Oct 6 11:20:22 2021 +1000 + + updated image and added decoding section of model + +commit 406a940163279adcbdf2bbd7b6d3edb1b5f119f0 +Author: Chun-Chiao Huang +Date: Wed Oct 6 01:19:37 2021 +0000 + + Create File + +commit 3d46c9eaed3926b4a79db2c39d61ba90207d16a4 +Author: Robert +Date: Wed Oct 6 01:04:35 2021 +0000 + + Added OASIS image loading functionality + +commit 172259bf816e6dfeee6826f0227eb00c9e120fec +Author: Tony +Date: Wed Oct 6 10:48:35 2021 +1000 + + Basic structure layout plus initial work on accessing images + +commit cdf20fb736a31238926b265036542d9bbfd1177f +Author: uououo +Date: Wed Oct 6 08:23:55 2021 +0800 + + upload the traing data of ISICS + +commit b1ee76d636397df1f1aa106d6f7b06b63ae05cdc +Author: Alex Patapan +Date: Wed Oct 6 10:21:03 2021 +1000 + + Changed tasks to the improved UNet and began developing basic structure based off provided research paper. + +commit 4556c7e5c0237bcdf4f7d8bf06300eaa41749663 +Author: Rick W +Date: Wed Oct 6 09:43:56 2021 +1000 + + visualise nifti data + +commit 181d102ddea1c661e13c37648569ef4034dffde2 +Author: Mark Coulon +Date: Wed Oct 6 08:44:23 2021 +1000 + + Added the model and dice co-efficient + +commit 2b3c0ce6813fcc5e40bf0068c3bbe00e04faf3d2 +Author: Mark Coulon +Date: Wed Oct 6 08:40:21 2021 +1000 + + Added the model and dice co-efficient + +commit cc9292197de525473b82d0b5560edd66c3115a57 +Author: NhatHuyNguyen +Date: Tue Oct 5 21:50:13 2021 +0700 + + rearrange code and add comments + +commit 5b5a329d97e643244b62e79781939f1ea450dfc3 +Author: NhatHuyNguyen +Date: Tue Oct 5 21:49:58 2021 +0700 + + remove patch size variable + +commit 894c03cd08c7a45aa1b17a73044d5cf5fbe8a34f +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 21:12:25 2021 +0800 + + update the instruction + +commit b49b455a4c1bac5ae5fc9939c4cd872c66daa99f +Author: uououo +Date: Tue Oct 5 20:29:44 2021 +0800 + + update the resource images folder + +commit 786aaf8f0a46d8677b749304797d52dccf733fde +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:25:51 2021 +0800 + + I delete this file because I want to try VQVAE + +commit 79176dcdb4052ace2be1b6c56b0a6597d6a3396e +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:25:44 2021 +0800 + + I delete this file because I want to try VQVAE + +commit 09f36003afbb0b03e5129fe8b67e01995ac8c647 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:25:36 2021 +0800 + + I delete this file because I want to try VQVAE + +commit a082c820426637c19edcb5b14152386f803ff74c +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:25:30 2021 +0800 + + I delete this file because I want to try VQVAE + +commit d9d49aab7831eb7595aea53ca81b12d4446445ad +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:25:24 2021 +0800 + + I delete this file because I want to try VQVAE + +commit 65fcd8321987a83cf449d566e5909de62bf365a7 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:25:08 2021 +0800 + + this is a test file so just delete it + +commit 3c0c59a5cb88ff3ccec4d8628226385e2ab117bf +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:24:51 2021 +0800 + + I delete this file because I want to try VQVAE + +commit ab6567ec8808cc2af45267ce9f0d3ed3b3c98e96 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:24:44 2021 +0800 + + I delete this file because I want to try VQVAE + +commit 54437cded2d650d2e20ae0392fe321811e93c24e +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:24:39 2021 +0800 + + I delete this file because I want to try VQVAE + +commit 4a6fc833752b4766a83e7b9788ec63a6ac569f2d +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:24:32 2021 +0800 + + I delete this file because I want to try VQVAE + +commit aba135709afcefd819bb969b457a12c4c4cba8e1 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:24:24 2021 +0800 + + I delete this file because I want to try VQVAE + +commit 88ca95e291e61ad4417c390762d921782c861146 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:24:17 2021 +0800 + + I delete this file because I want to try VQVAE + +commit c32595f130c35f51cd4e2d11ae746213abdaf216 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:24:09 2021 +0800 + + I delete this file because I want to try VQVAE + +commit 867c5265a89dc13610b227401b024e538934c4ff +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:23:51 2021 +0800 + + I delete this file because I want to try VAVAE + +commit cbe80cb92e1651e3da3bfd8781d61c4e4aa7fe76 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:23:42 2021 +0800 + + I delete this file because I want to try VAVAE + +commit 90402e60ffdd7d0b456d2ec11f88ff61d34e7cc9 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:22:58 2021 +0800 + + delete this file because it is useless now + +commit 9c7bada86c36acf0f9351f84bcd5a324a1e7d68d +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Tue Oct 5 20:22:22 2021 +0800 + + delete 3710.txt because it is used for testing + +commit 125423b3a5434e4eb945e12cd5fceb3e116e5222 +Author: NhatHuyNguyen +Date: Tue Oct 5 16:55:23 2021 +0700 + + split process data code into functions + +commit 57c0f64d48dc3181a95fcdb717df3103b7cafee9 +Author: NhatHuyNguyen +Date: Tue Oct 5 16:18:46 2021 +0700 + + fix loading test set + +commit 231b60d7938cad1328e6540406937ad364618501 +Author: NhatHuyNguyen +Date: Tue Oct 5 16:06:37 2021 +0700 + + add test acc image + +commit 3c64ab1b1a3a215d4602c630d2e07bdbb4da26c4 +Author: NhatHuyNguyen +Date: Tue Oct 5 16:05:37 2021 +0700 + + test commit 3 + +commit 4b6c227081e76c86cc342e9ed609d966f70e5f23 +Author: NhatHuyNguyen +Date: Tue Oct 5 19:04:47 2021 +1000 + + test commit 2 + +commit d61534203de3d464d22371c7621c1afe6d5b5a8b +Author: NhatHuyNguyen +Date: Tue Oct 5 15:38:41 2021 +0700 + + rewrite dataset processing + +commit 2b0c3e55c5e16153661807637e7e5ea5f874109e +Author: NhatHuyNguyen +Date: Tue Oct 5 14:26:35 2021 +0700 + + test commit (there was a problem with git) + +commit 60bd1ac584fd5dee1ab84ed0fc1169763c159df8 +Author: NhatHuyNguyen +Date: Tue Oct 5 17:18:28 2021 +1000 + + new plots + +commit 17f4709e466fb736ba2197939599e2b2d09cd4d1 +Author: NhatHuyNguyen +Date: Tue Oct 5 17:18:20 2021 +1000 + + move train() to class Perceiver + +commit 263bb9295206153ac3f55ef6ff2337350d039b8d +Author: NhatHuyNguyen +Date: Tue Oct 5 17:17:44 2021 +1000 + + change img size + +commit 21585a08031652e669d6b59750a5c8acf9408678 +Author: Rick W +Date: Tue Oct 5 16:26:28 2021 +1000 + + flob file names. Split into train, test, val. Create Datasets + +commit 6de316a0c63e39ad5f4f089468fe9fd34bae3f5d +Author: NULL000 <49639934+NULL1FY3R@users.noreply.github.com> +Date: Tue Oct 5 16:06:53 2021 +1000 + + loaded and normalised the OAI AKOA Knee MRI data set + +commit 937b6e5b5d1ad4cfe03730be574e700ed2799121 +Author: NhatHuyNguyen +Date: Tue Oct 5 13:38:29 2021 +1000 + + add save data function + +commit f9e34d3476c90d75f1b7839c4fb2cd549dcbc68b +Author: NhatHuyNguyen +Date: Tue Oct 5 10:25:54 2021 +0700 + + complete driver + +commit d6e35c3198c83cddeddd25e4dd05228c5298e0b7 +Author: NhatHuyNguyen +Date: Tue Oct 5 10:25:10 2021 +0700 + + reshape img + +commit 57e91711f33680d6fefa4fcea095ab07910a02e1 +Author: NhatHuyNguyen +Date: Tue Oct 5 10:21:15 2021 +0700 + + patient split (REVERT TO THIS IF NOT WORKING) + +commit a89d4095db7484e50a3eef8f4eb330972689c662 +Merge: aa56bddf 4f782df3 +Author: uououo +Date: Tue Oct 5 09:11:40 2021 +0800 + + Merge branch 'topic-recognition' of https://github.com/haoxiangzhang-45473771/PatternFlow into topic-recognition + +commit aa56bddf7c0a8d153b9820f909c3527df0731481 +Author: uououo +Date: Tue Oct 5 09:09:33 2021 +0800 + + ipynb version style gan but takes time + +commit c9b3d19d3447ce5fdd4612f0a5e0537ec21b3e60 +Author: NhatHuyNguyen +Date: Mon Oct 4 22:14:50 2021 +0700 + + initial information + +commit 4f782df39287be68e179b33a6fccf0b5a5a1c366 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Mon Oct 4 19:00:25 2021 +0800 + + change color of some headings for readme file + +commit 634d0b06948ca8683c76b3205aa3f1c4f195b8ee +Author: NhatHuyNguyen +Date: Mon Oct 4 17:48:05 2021 +0700 + + add epoch label + +commit 7f4c0ce18c1b6cad51fc5ab56671baede75627c0 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Mon Oct 4 18:37:51 2021 +0800 + + update readme file format + +commit 4e1e936d39bf52b5adc0137a50b5d9ef66dba796 +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Mon Oct 4 18:35:57 2021 +0800 + + test two for readme file + +commit f2c34b9f8471cd6897382a66290339818efc56cc +Author: haoxiang zhang <91166169+haoxiangzhang-45473771@users.noreply.github.com> +Date: Mon Oct 4 18:35:12 2021 +0800 + + test markdown for readme file + +commit 318f7b7d0de977aa59f222501d628b49b123f618 +Author: uououo +Date: Mon Oct 4 18:31:23 2021 +0800 + + update the README.md with more information + +commit 8647dea4d51f435a0eeeca3ea0a63517aacf7073 +Author: NhatHuyNguyen +Date: Mon Oct 4 19:16:37 2021 +1000 + + update figures + +commit 092b9b14f71ef9f074eb48c345caee716aed360e +Author: NhatHuyNguyen +Date: Mon Oct 4 16:14:45 2021 +0700 + + remove einops import + +commit 09e4c3f9eaf07fe1d348449d4efbfe4af31ef78f +Author: NhatHuyNguyen +Date: Mon Oct 4 16:13:49 2021 +0700 + + remove einops code + +commit 05164a7be28efa7dc7f0b92564d367adf433aab0 +Author: NhatHuyNguyen +Date: Mon Oct 4 16:12:31 2021 +0700 + + change cmts + +commit 792027df8f1c47c2d353eeaf9ccac2c36d4a377a +Author: NhatHuyNguyen +Date: Mon Oct 4 16:11:18 2021 +0700 + + apply batch_size factor for train set + +commit cbbfada265f8dbbac59dce392dccc0992bd469a0 +Author: NhatHuyNguyen +Date: Mon Oct 4 16:08:44 2021 +0700 + + remove notebooks + +commit 545174a1d699967df3d4e75f725328c83dd985d7 +Author: NhatHuyNguyen +Date: Mon Oct 4 16:07:44 2021 +0700 + + remove unused imports + +commit dd9cef528aa9b17a9f9551c1d8d0ae6c9ca9152e +Author: NhatHuyNguyen +Date: Mon Oct 4 16:04:52 2021 +0700 + + shorten return + +commit e03e3c2dc8f91fc8cfcf5754604db49c62dc8d85 +Author: NhatHuyNguyen +Date: Mon Oct 4 16:03:29 2021 +0700 + + prettier code + +commit 1fb91fc7531e9e123294d25240e32129ca0af8a9 +Author: NhatHuyNguyen +Date: Mon Oct 4 18:58:05 2021 +1000 + + remove comments + +commit c9374b97a8e6495b9a60614cce663b2dab61eae5 +Author: AnqiYan <781236437@qq.com> +Date: Mon Oct 4 10:49:19 2021 +0800 + + fiexed graph display issue + +commit 77c326310adfbb1cc764c9045685ef34d4a9244e +Author: AnqiYan <781236437@qq.com> +Date: Mon Oct 4 10:47:30 2021 +0800 + + Add val_train accuracy, tain_validation loss graph + +commit cf6bdd8d15b8456fca94d1321f92e25b25bd070e +Author: NhatHuyNguyen +Date: Mon Oct 4 12:28:36 2021 +1000 + + remove some variables + +commit 4f110c238b27c807f0255c43769750f85694f6c6 +Author: NhatHuyNguyen +Date: Mon Oct 4 12:21:31 2021 +1000 + + remove densnet dependency + save model with .save() + +commit a1806196b38b071aee39bc10ef371d79b5d2ee34 +Author: NhatHuyNguyen +Date: Mon Oct 4 01:32:32 2021 +1000 + + changes in params (match paper specs) + +commit c9f129f38992f9d9823d0fb27eeca4fa318afd14 +Author: Humphrey Munn +Date: Mon Oct 4 00:51:51 2021 +1000 + + transformer and classifier networks added (still need to test) + +commit fd67994b46a35f7a81a7f163b1fa450cd302210c +Author: AnqiYan <781236437@qq.com> +Date: Sun Oct 3 22:45:51 2021 +0800 + + Updated validation accuracy, train accuracy graphs and loss graphs + +commit 7d335bdb9d7003b7f0fe5d9ba14802d6d3252479 +Author: NhatHuyNguyen +Date: Sun Oct 3 19:23:04 2021 +1000 + + change plot title + +commit 5bd63a9f37a4a55a7ae1803ee157d4564b241b48 +Author: AnqiYan <781236437@qq.com> +Date: Sun Oct 3 16:58:08 2021 +0800 + + Added main function which is used to run the entire project + +commit 27922722873cf5d846b32a26ad34bdbb4cc1dada +Author: AnqiYan <781236437@qq.com> +Date: Sun Oct 3 16:55:21 2021 +0800 + + Added Loss_accuracy graph, added some contents in the introduction + +commit 98145ee31b58ccd4e1b35cdafa1771d38eadf0d2 +Author: AnqiYan <781236437@qq.com> +Date: Sun Oct 3 16:53:22 2021 +0800 + + Added Loss_accuracy graph, added some contents in the introduction + +commit 5ce5020fd92287cae90375cadee89c76997ec249 +Author: NhatHuyNguyen +Date: Sun Oct 3 18:52:00 2021 +1000 + + rearragne code + +commit 72ccd677cc7bf3b6231ed5890d28efb0f6cfdcc6 +Author: NhatHuyNguyen +Date: Sun Oct 3 18:51:45 2021 +1000 + + remove unnecessary code + +commit c477d26e28cd8d7e10e2a7f98e5bba52c53b5318 +Author: AnqiYan <781236437@qq.com> +Date: Sun Oct 3 16:36:10 2021 +0800 + + Load result image + +commit 85d317fb651276996b62dd11178285d572ccbb12 +Author: AnqiYan <781236437@qq.com> +Date: Sun Oct 3 16:29:28 2021 +0800 + + Folder used to store images + +commit 38c68eea18ba547c355db0cb42771e6b7ec51522 +Author: NhatHuyNguyen +Date: Sun Oct 3 17:49:34 2021 +1000 + + rearrange code + +commit 4b913351f2796ca40d2d99e7ecf890734dcd0e59 +Author: NhatHuyNguyen +Date: Sun Oct 3 17:49:20 2021 +1000 + + remove unecessary code + +commit 79ed9319f5d93cd8246de686e179c8aed1fdcc96 +Author: AnqiYan <781236437@qq.com> +Date: Sun Oct 3 15:46:16 2021 +0800 + + Created Dice coefficient function + +commit 5e5175b7d7166dfea5c8c7016acde69b77521c65 +Author: uououo +Date: Sun Oct 3 14:25:27 2021 +0800 + + upload the ganstyle notebook version + +commit bc3c036fd951890f75086da952a10bece14d788c +Author: Ahmed +Date: Sun Oct 3 15:25:19 2021 +1000 + + importing data successfully + +commit c16dd092e1101bfc7ceb99fe2d19d2c40f081f21 +Author: NhatHuyNguyen +Date: Sat Oct 2 23:17:55 2021 +1000 + + working model + +commit 99d7f4361dda45e064a7e2fc60d17cccf8d63e79 +Author: Ahmed +Date: Sat Oct 2 21:43:35 2021 +1000 + + initial tensorflow setup + +commit 27b72bdeb4def4e708054d4706eb6c45ac9af902 +Author: AnqiYan <781236437@qq.com> +Date: Sat Oct 2 18:38:48 2021 +0800 + + Constructed Improved UNET + +commit d683c5ec568c2ecad16fb4bb6fca065660f66408 +Author: AnqiYan <781236437@qq.com> +Date: Sat Oct 2 17:54:37 2021 +0800 + + Constructed help functions used to construct the network easier + +commit f0134df187ab41642db155f54bbf415950abc224 +Author: NhatHuyNguyen +Date: Sat Oct 2 12:01:59 2021 +0700 + + convert dataset to arrays + +commit 26fd037ae089e7885efa2326c109f4068394d6a0 +Author: NhatHuyNguyen +Date: Sat Oct 2 08:43:02 2021 +0700 + + cuDNN failure + +commit e56e468acddbcd2e9f1667ef46a8a1884a048bfa +Author: NhatHuyNguyen +Date: Fri Oct 1 21:04:05 2021 +0700 + + change var name + +commit f7b350d7b0ed5eef51ebd5b0e8712f1a8d2346ac +Author: Humphrey Munn +Date: Fri Oct 1 22:07:55 2021 +1000 + + cross attention module network + improved FF to work for whole batch + +commit f1644e1554a0222e2bda2dd75c287cc09de0ff78 +Author: NhatHuyNguyen +Date: Fri Oct 1 16:29:43 2021 +0700 + + remove unnecessary code + +commit 7727c7295615707dabc407fc45995bef8a95a766 +Author: NhatHuyNguyen +Date: Fri Oct 1 16:29:33 2021 +0700 + + remove spaces + +commit 8c24429a488a78960090c6ae01a3cb1926a8900f +Author: NhatHuyNguyen +Date: Fri Oct 1 16:29:26 2021 +0700 + + change constant styles + +commit 1686fe37e6b0bec449b1501e0fb54a15f605b696 +Author: NhatHuyNguyen +Date: Fri Oct 1 16:29:16 2021 +0700 + + modify a bit + +commit d732e339c49018e1c4dbd09c3b56b2eb66650a45 +Author: NhatHuyNguyen +Date: Fri Oct 1 15:48:56 2021 +0700 + + change var name + +commit 94ccb7995ca4514179f09aa445c3532893c6aadd +Author: NhatHuyNguyen +Date: Fri Oct 1 15:48:38 2021 +0700 + + no multiple layers? + +commit b83d4299ed7c18cfe3045fc811b4abc6b4d597c0 +Author: NhatHuyNguyen +Date: Fri Oct 1 15:48:10 2021 +0700 + + change variable names + +commit 11d8712b3ff4bd28a00ac1a0f55818497ff95147 +Author: NhatHuyNguyen +Date: Fri Oct 1 15:45:12 2021 +0700 + + remove einops usage + +commit 4b6bc5fb9dd50d78a847ea633df428c48d09192f +Author: NhatHuyNguyen +Date: Fri Oct 1 10:35:16 2021 +0700 + + fourier encode + +commit 50b3c6de7a936aa11b782adbb6f8aa39513f4fd5 +Author: NhatHuyNguyen +Date: Fri Oct 1 09:27:30 2021 +0700 + + add checkpoint stuff (commented out) + +commit 427295e7d31f6d77aa44fb58fca0fa86dbbb84ab +Author: NhatHuyNguyen +Date: Fri Oct 1 08:50:44 2021 +0700 + + no need patch? + +commit 3fa7b92fe45b18b8052605ed0b871418679bce4d +Author: Ahmed +Date: Fri Oct 1 05:48:23 2021 +1000 + + working on getting environment set up + +commit f14e19d7a751f1a373d6973c9438ec0aded2c4fb +Author: Ahmed +Date: Fri Oct 1 05:08:45 2021 +1000 + + initial readme commit + +commit 71f62e284d1f7557152ff2a4b303e65589ef785b +Author: Christian +Date: Thu Sep 30 21:49:39 2021 +1000 + + Create main_maskrcnn.py + + Initial code for data preparation. + This is using the implementation by akTwelve. + https://github.com/akTwelve/tutorials/blob/master/mask_rcnn/MaskRCNN_TrainAndInference.ipynb + +commit d7fc308e16c5cb3d08667ebab98da191d5be9557 +Author: David Phun +Date: Thu Sep 30 15:21:54 2021 +0700 + + Fix error in displaying images in README + +commit 4a14d6f7be4610a3a0cdc4326de763cd63a4274a +Author: David Phun +Date: Thu Sep 30 15:14:50 2021 +0700 + + Update how it works section in README + +commit 358daee1326d2946a42d624ce8a2bb4cfb37cc73 +Author: AnqiYan <781236437@qq.com> +Date: Thu Sep 30 11:53:51 2021 +0800 + + Added comment in the function + +commit 09efeec3e95f0a3f41e53efcd9336ebf871f630e +Author: AnqiYan <781236437@qq.com> +Date: Thu Sep 30 11:46:13 2021 +0800 + + Implemented train_test split on the data + +commit 57dca39f8b0086a15f2de6f1fcea3155c372e7bb +Author: AnqiYan <781236437@qq.com> +Date: Thu Sep 30 10:03:31 2021 +0800 + + Constructed the UNET model + +commit 76870ea43b49b42c4a913e3e96f3feec5fd1bdea +Author: Christian +Date: Thu Sep 30 11:29:00 2021 +1000 + + Create ReadMe.txt + + This is the project description, and initial commit + +commit 01d6688233e4e7ea3eb621dec107d8f9b87dc7d1 +Author: Erin14 +Date: Thu Sep 30 00:43:35 2021 +0800 + + combine data preprocessing and model building, trained on a small subset + +commit 9e5b01c2a5c24d5b591aba868c2a5734a00c9a9c +Author: NhatHuyNguyen +Date: Wed Sep 29 22:16:33 2021 +0700 + + write train function + modify some perceiver code + +commit 44d57a7f61c4269a5c8fc2e80e85a360639494d3 +Author: NhatHuyNguyen +Date: Wed Sep 29 22:15:53 2021 +0700 + + need to implement fourier in class + +commit 296974736ddebda6474e6b62be12fe3a9e53ee59 +Author: NhatHuyNguyen +Date: Wed Sep 29 22:15:33 2021 +0700 + + add some driver code + +commit b942c9c9b6121c10aae9a715ba3669e02d843f71 +Author: AnqiYan <781236437@qq.com> +Date: Wed Sep 29 22:49:34 2021 +0800 + + The image load funcion has been loaded + +commit 4d3943a2e8a8a7eabda12390db70d62d11f850ae +Author: AnqiYan <781236437@qq.com> +Date: Wed Sep 29 22:00:34 2021 +0800 + + Updated README.MD + +commit 9e54d2fb56ec646596468abdd85618a1ea33d87f +Author: AnqiYan <781236437@qq.com> +Date: Wed Sep 29 21:51:07 2021 +0800 + + CREATED README.MD + +commit 459c2e5fc0ff59c899511bdf7aec68bdab4cc027 +Author: NhatHuyNguyen +Date: Wed Sep 29 17:39:09 2021 +0700 + + remove unused imports + +commit 3fb9739157b621da84855b01630e791d5d829b14 +Author: NhatHuyNguyen +Date: Wed Sep 29 17:35:48 2021 +0700 + + split code into files + +commit 322588d0dc7517db546100104d3834f023afdb8b +Author: NhatHuyNguyen +Date: Wed Sep 29 16:40:01 2021 +0700 + + add cross and transformer + +commit a78171c4bc7aa856c0e9dbbb35155bce7eff00bb +Author: NhatHuyNguyen +Date: Wed Sep 29 15:23:01 2021 +0700 + + add files to ignore + +commit 95c2b7ebb336dc209617c530514273dbf468b4c7 +Author: NhatHuyNguyen +Date: Wed Sep 29 15:22:53 2021 +0700 + + add cross_attn block + +commit 47ca61ecd4de2c5bed70c0676ae1ca825f56dc4c +Author: Humphrey Munn +Date: Tue Sep 28 21:00:39 2021 +1000 + + fixed FF code, and optimized with tf + +commit ed49311985f927d9d2b0a4c28de082ff0439d342 +Author: uououo +Date: Tue Sep 28 10:49:23 2021 +0800 + + update the readme file + +commit 035b51775b5741ac8bb72ebf9e016e3c2b1cfb29 +Author: uououo +Date: Tue Sep 28 10:42:43 2021 +0800 + + codes for projecting images back to latent space + +commit 7d7cd4ba70fd25587681b2f8681f7f8d8f8857aa +Author: uououo +Date: Tue Sep 28 10:23:39 2021 +0800 + + upload codes for the training part + +commit 9d3dbffa9ac0c1e147ae95c58b9ae51826a8c74e +Author: uououo +Date: Tue Sep 28 10:22:00 2021 +0800 + + upload codes for processing images + +commit f1438773a4424d0d0f9ba1094dddfc628cf38f71 +Author: uououo +Date: Tue Sep 28 10:09:17 2021 +0800 + + upload codes for the preprocessing of the img data + +commit c5fd6faff779fabbdd1ea8c46a27283f08ed9693 +Author: uououo +Date: Tue Sep 28 10:01:06 2021 +0800 + + upload codes for prediction process + +commit d4953e68ea4c6ef5b8c398cde97a01352f98f8f3 +Author: uououo +Date: Tue Sep 28 09:59:02 2021 +0800 + + upload cog file + +commit 84583d8b558dd19b2a84b7c0d4591e57b15f29b6 +Author: uououo +Date: Tue Sep 28 09:50:01 2021 +0800 + + Upload codes for genereating and saving images + +commit b93ff61d0ad53e72ffcb8720ad118c739e86a671 +Author: uououo +Date: Tue Sep 28 09:43:16 2021 +0800 + + upload the codes for the basic model of stylegan + +commit 54876466843d036779d4aca5c8df1e4c57db5e42 +Author: uououo +Date: Tue Sep 28 09:27:23 2021 +0800 + + upload the codes for building the image dataset + +commit a7f722cd46292f6a1e6f5c5fd446f5f88eb90b55 +Author: uououo +Date: Tue Sep 28 09:05:48 2021 +0800 + + upload the OASIS brain images folder + +commit a64d59ba91c7be376e23d6346874102801cd88f7 +Author: Humphrey Munn +Date: Tue Sep 28 01:57:04 2021 +1000 + + data loading and FF encodings done (not tested) + +commit 00e26a5ae2b2485e716ee003195c083b8ef6c31d +Author: uououo +Date: Mon Sep 27 18:16:52 2021 +0800 + + upload the old version of gan model + +commit 323612d239cff9053033e99552fae9b4dfcc422d +Author: NhatHuyNguyen +Date: Mon Sep 27 16:06:53 2021 +0700 + + initial code (load images and normalize) + +commit 42c3651f0cc22f94c57011443f66580df07e9d0b +Author: Erin14 +Date: Mon Sep 27 16:56:01 2021 +0800 + + upload .py file topreprocess ISICs dataset + +commit 17618db6875b459aabf9c46fc25c4461470d4170 +Author: David Phun +Date: Mon Sep 27 13:46:26 2021 +0700 + + Initialize project and compose README introduction + +commit e67d0248b977550b9b2f5506f4c88388858b9208 +Author: Humphrey Munn +Date: Sun Sep 26 16:13:40 2021 +1000 + + initial commit + +commit 0e309e3192e4e6dfe13153393acf55e4626aea7e +Author: NhatHuyNguyen +Date: Sun Sep 26 11:29:09 2021 +0700 + + add files to ignore + +commit ac1099643dbde63dd9d74d12df1308cf28247c65 +Author: NhatHuyNguyen +Date: Sun Sep 26 10:13:57 2021 +0700 + + init model files + +commit e7a43aba3952c589707ebd95fa65b8431c9f94e8 +Author: Erin14 +Date: Sat Sep 25 00:41:19 2021 +0800 + + a draft version of improved U-Net model + +commit c5ef3cc17a94e354a3ba3f1db39986075404b23b +Author: Richard Wainwright +Date: Fri Sep 24 19:07:47 2021 +1000 + + update from lab + +commit 8bd8f6623068f40b2f5ed997aff9ae7181eeed34 +Author: Alex Patapan +Date: Fri Sep 24 16:25:56 2021 +1000 + + developed rudimentary vector quantize function + +commit cf32feeaedd8fae7b86e22d3f8057ed5ea61dcb1 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Sep 24 16:05:07 2021 +1000 + + ss + +commit e9a19a84a65ac7793f0c6a1f11f0cc69edba2073 +Merge: 33c5b6fe b4e4ee52 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Sep 24 16:00:52 2021 +1000 + + Merge branch 'topic-recognition' of https://github.com/wakameds/PatternFlow into topic-recognition + +commit 33c5b6fe8476dcf0288c5ac7ced9be2239d85e56 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Sep 24 15:40:05 2021 +1000 + + test + +commit 595d1a05ff4b2199ab9e9a5239d3a2213409f6d6 +Author: Rick W +Date: Fri Sep 24 15:36:38 2021 +1000 + + initial commit + +commit b4e4ee52e2be5f33b56c28a0927de4f660d80e4f +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Sep 24 15:16:29 2021 +1000 + + Colaboratory を使用して作成しました + +commit cee0e3f512dfdabbe3055020b58e5e2dabdab895 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Sep 24 15:00:47 2021 +1000 + + Colaboratory を使用して作成しました + +commit c24a76d61b56370487bdfa7e35cfc309b9ac0e8f +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Sep 24 14:59:51 2021 +1000 + + Colaboratory を使用して作成しました + +commit 137b0db651bef59427c127c3bbb617b824b5274c +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Sep 24 14:56:42 2021 +1000 + + test + +commit 6724012e79b7bbfbad40b6370a26b64a7cb66941 +Author: Wakame <85863413+wakameds@users.noreply.github.com> +Date: Fri Sep 24 14:54:57 2021 +1000 + + test to use github + +commit e9dce816bc8fd6631cc278e6680a88dcbfc21f78 +Author: des-gan09 +Date: Fri Sep 24 13:48:03 2021 +1000 + + test + +commit d04c3d0bf8f80e48f77d8ce5c66ec0466de6fa90 +Author: Alex Patapan +Date: Thu Sep 23 10:09:39 2021 +1000 + + Updated readme + Added basic models for decoder and encoder + +commit 33c4bd1554de563bf1ed49461d029f2bbe847fc7 +Author: Erin14 +Date: Wed Sep 22 16:29:27 2021 +0800 + + test creating README.md and connection with remote repo + +commit a477b9b5850158973e8519f65c40d3d29fcd60da +Author: uououo +Date: Wed Sep 22 14:26:01 2021 +0800 + + this a second test + +commit b58ce18c27ba42fca854e047f05115e2877af579 +Author: uououo +Date: Wed Sep 22 14:14:37 2021 +0800 + + This is a test for readme file + +commit 58ce653164f30f86a77109d5cdcc63a96f811963 +Author: Alex Patapan +Date: Wed Sep 22 15:34:33 2021 +1000 + + added readme and renamed folder + +commit 2e520ead61e6dedf19973f2b0db59aee3e6c837a +Author: uououo +Date: Wed Sep 22 13:22:43 2021 +0800 + + this is a test txt file + +commit 0ac4ee75eb26f5d1a63bff2ea29688c7b03ff3f0 +Author: NhatHuyNguyen +Date: Wed Sep 22 11:19:42 2021 +0700 + + add student files to ignore + +commit 9f9b0ac482b10e3388d21e8fb15048f2cc2fefdf +Author: NhatHuyNguyen +Date: Wed Sep 22 11:19:33 2021 +0700 + + create readme + +commit 72c43206fcac4e433565e953c40bab0e7fb379ce +Author: gwehr1 <91168723+gwehr1@users.noreply.github.com> +Date: Wed Sep 22 12:55:17 2021 +1000 + + created readme.md file + +commit b6b86c20a27ac3e644cf28186aa03d1ec1a8d76f +Author: s4482727 <37468566+leecwj@users.noreply.github.com> +Date: Wed Sep 22 12:04:51 2021 +1000 + + created lab report folder for self + +commit ed816815445d207a82b4dda020c9f2c753a02d38 +Author: Alex Patapan +Date: Wed Sep 22 11:34:21 2021 +1000 + + renamed model and new notebook for main script + +commit 98c46660868e243d1d77d3c361e598479f9d6c56 +Author: Alex Patapan +Date: Wed Sep 22 10:34:40 2021 +1000 + + creating initial files + +commit b5c1b0bb07e7b816344a4abfd0ee49a2c8a8ec65 +Author: Mark Coulon +Date: Wed Sep 22 08:04:16 2021 +1000 + + Chosen and created project files and folder successfully + +commit 3e1eb380912d7439057dee34178ab3017f7c5192 +Merge: 676dc95d 406c8391 +Author: Shakes +Date: Tue Jun 8 09:41:08 2021 +1000 + + Merge pull request #194 from shakes76/dependabot/pip/algorithms/transform/s4371869_radon_transform/tensorflow-2.5.0 + + Security fix: Bump tensorflow from 2.0.0 to 2.5.0 in /algorithms/transform/s4371869_radon_transform + +commit 406c839167ea345a424995b96ddafd5e548215fe +Author: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> +Date: Fri May 21 16:50:13 2021 +0000 + + Bump tensorflow in /algorithms/transform/s4371869_radon_transform + + Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.0.0 to 2.5.0. + - [Release notes](https://github.com/tensorflow/tensorflow/releases) + - [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md) + - [Commits](https://github.com/tensorflow/tensorflow/compare/v2.0.0...v2.5.0) + + Signed-off-by: dependabot[bot] + +commit 8eb741d22a3d7ff11ab12cc574fc7e4a56101b6c +Merge: d1b803cd faa499e2 +Author: Shakes +Date: Wed Nov 25 23:14:11 2020 +1000 + + Merge pull request #184 from paiwandkarem/topic-recognition + + Topic recognition + +commit faa499e20afddf34898739f352e5cc29ad8fe2d5 +Merge: a5408385 f56afc35 +Author: Paiwand Karem +Date: Wed Nov 25 19:55:00 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/paiwandkarem/PatternFlow into topic-recognition + +commit a540838568f30f6bb2096afe3d4f5748be520ab7 +Author: Paiwand Karem +Date: Wed Nov 25 19:54:45 2020 +1000 + + Updated driver.py comments to adhere to feedback + +commit f56afc354f4aeb05e680fe35e05986cb55ee41e9 +Author: Paiwand Karem <69803724+paiwandkarem@users.noreply.github.com> +Date: Wed Nov 25 19:53:08 2020 +1000 + + Edited README.md due to line error + +commit 6f777f34520dff84685da39bbed08ece17c88b79 +Merge: 27cef03f 3b4a2a93 +Author: Paiwand Karem +Date: Wed Nov 25 19:50:15 2020 +1000 + + Removed epoch image files but kept folder such that the driver.py will still function as it requires folder with its name (feedback). + +commit 27cef03f074f3a29ef70438f8ab2e8446bd160ed +Author: Paiwand Karem +Date: Wed Nov 25 19:49:34 2020 +1000 + + Removed epoch image files but kept folder such that the driver.py will still function as it requires folder with its name (feedback). + +commit d1b803cd3b36210d6109ef3549c86688f1bc0de6 +Merge: 12f69465 a9fba8aa +Author: Shakes +Date: Wed Nov 25 16:48:24 2020 +1000 + + Merge pull request #102 from lyubinapple/topic-recognition + + Topic recognition-Updated + +commit a9fba8aaee7d5ee595d4e65d12bdcd5809dde85b +Author: Bin Lyu +Date: Wed Nov 25 16:28:06 2020 +1000 + + add recognition/README.md (original file from Shakes) try to fix the conflict again. + +commit c7025bb9eb8b77fea0a13d103df47ae19a8a8b66 +Author: Bin Lyu +Date: Wed Nov 25 16:25:13 2020 +1000 + + delete the conflict file + Please enter the commit message for your changes. Lines starting + +commit 3a9a96657c2c0135f453647b5fb57dacf4f3d961 +Author: Bin Lyu +Date: Wed Nov 25 16:19:24 2020 +1000 + + try to update the branch again. + +commit 12f6946568f38ab3640db6b613e7e149a874099c +Merge: 5288e260 ba8d32b2 +Author: Shakes +Date: Wed Nov 25 15:16:09 2020 +1000 + + Merge pull request #188 from amyzhao11/topic-recognition + + Switched branches + +commit 5288e260392f08273a0a564b050550d637c855d5 +Merge: bc95b5ba 67f95d4b +Author: Shakes +Date: Wed Nov 25 15:12:56 2020 +1000 + + Merge pull request #175 from dannyt622/topic-recognition + + Topic recognition-implement improved unet for OASIS brain dataset s4563609 + +commit bc95b5bac567880f1ae4a84e7924a5540250e199 +Merge: 2cbf8e5d 6ab07362 +Author: Shakes +Date: Wed Nov 25 15:07:48 2020 +1000 + + Merge pull request #89 from Ruaman/topic-recognition + + Topic recognition - Ziyan Wang (45758151) OASIS DCGAN + +commit 2cbf8e5d073afc6dc70d3f532c1841ba40644b48 +Merge: 1dc5476a 1fc2505e +Author: Shakes +Date: Wed Nov 25 14:25:24 2020 +1000 + + Merge pull request #139 from Bigturtlefly/topic-recognition + + DCGAN Final submit from S4598165 + +commit 67f95d4bf74b8272f7485580449d111ca43807e2 +Author: dannytong +Date: Wed Nov 25 14:23:56 2020 +1000 + + Added Readme back + +commit 1fc2505e10dd4f55cb470aeaaa79564482713968 +Author: Bigflyturtle +Date: Wed Nov 25 14:11:39 2020 +1000 + + Final Change + + Move image files into their own sub directory. + +commit 7cdf1fc4b3469943be2f8ba677f90b7a2884fa14 +Author: Bigturtlefly <69615599+Bigturtlefly@users.noreply.github.com> +Date: Wed Nov 25 14:01:19 2020 +1000 + + Delete * + +commit 6ab073624d0a06724978d051b33f553c083ec56f +Merge: b505aa36 1dc5476a +Author: Laotutu <39024821+Ruaman@users.noreply.github.com> +Date: Wed Nov 25 11:36:30 2020 +0800 + + Merge branch 'topic-recognition' into topic-recognition + +commit ba8d32b21c7357db5a7720cca2b6cf948324a55d +Merge: 05ed63e5 8e7bc121 +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Wed Nov 25 12:19:19 2020 +1000 + + Merge pull request #1 from amyzhao11/master + + Merging my changes from the branch master to the branch recognition + +commit fd4b54909df098a0e8ab37ff5eb7f206aa39b918 +Author: Bin Lyu +Date: Wed Nov 25 10:18:33 2020 +1000 + + The InfoVAE of shakes was deleted by mistake. Re-upload now + +commit 1dc5476a0279df9c479029b8b0d4e67f594d9ec1 +Merge: 4af537e8 aa3e5d63 +Author: Shakes +Date: Wed Nov 25 10:00:38 2020 +1000 + + Merge pull request #187 from Thomas-TTC/topic-recognition + + Segment the ISICs data set with the U-net - 45051423 + +commit 4af537e866b6a91fe87d55c1a7d4c607cf549966 +Merge: 8a6838c8 9389ebd6 +Author: Shakes +Date: Wed Nov 25 09:31:30 2020 +1000 + + Merge pull request #156 from A-Bayusuto/topic-recognition + + Topic recognition - 45616738 + +commit 8a6838c8e612b52beda725cb9b82ad6109d1f205 +Merge: 6d31d554 1b794898 +Author: Shakes +Date: Wed Nov 25 09:25:59 2020 +1000 + + Merge pull request #136 from Pragatheeswari-dev/topic-recognition + + Topic recognition + +commit 6d31d554ff044082f8b0af0d264fa2a9b76d997a +Merge: 60ee5a7b c6393478 +Author: Shakes +Date: Wed Nov 25 09:24:42 2020 +1000 + + Merge pull request #129 from lilCheesePuff/topic-recognition + + Topic recognition + +commit 60ee5a7b675ff9d11b62ae6af78ae5fdb0a2d4f8 +Merge: dd7ffe9b 370dbf53 +Author: Shakes +Date: Wed Nov 25 09:22:11 2020 +1000 + + Merge pull request #125 from arushi-mah/topic-recognition + + Topic recognition - UNET with ISIC dataset + +commit dd7ffe9b072dc88ea3c19e576b96c2f7e3557640 +Merge: 44c66a33 73eb47a5 +Author: Shakes +Date: Wed Nov 25 09:21:25 2020 +1000 + + Merge pull request #109 from danielzhangau/topic-recognition + + Implementation of Improved_UNET on ISIC data set for generating lesion segmentation + +commit 44c66a33aba3fbf35250379a837e1dcb3a3d4a15 +Merge: b1964e65 d34d142b +Author: Shakes +Date: Wed Nov 25 09:16:24 2020 +1000 + + Merge pull request #154 from s4542006/topic-recognition + + UNet for ISIC 2018 Image Segmentation + +commit b1964e653a22e12feb277f1a8b7d38cc46b09e9c +Merge: f317a220 f1147cc0 +Author: Shakes +Date: Wed Nov 25 09:11:36 2020 +1000 + + Merge pull request #149 from gmulhearn/topic-recognition + + Topic recognition - Solution for AKOA Laterality Classification + +commit f317a2200a66e5ccb62d4922a6cb677799a36379 +Merge: 20bc8672 f6d48e87 +Author: Shakes +Date: Wed Nov 25 09:10:38 2020 +1000 + + Merge pull request #145 from ArunHarish/topic-recognition + + Topic recognition OASIS Brain Dataset 44340326 + +commit 20bc86722636735156b9ff78f94b506987762de3 +Merge: 2881e6ae 92ba27db +Author: Shakes +Date: Wed Nov 25 09:09:06 2020 +1000 + + Merge pull request #153 from yorkequ98/topic-recognition + + Topic recognition - Variation Autoencoder + +commit 9389ebd6cda809bf53b968e84675b419cc9eda51 +Author: A-Bayusuto <31500417+A-Bayusuto@users.noreply.github.com> +Date: Tue Nov 24 23:18:49 2020 +1000 + + Update README.md + + accidently pushed old readme + +commit 63681ccfa75495fe80211bd93513318d416e8f8d +Author: A-Bayusuto <31500417+A-Bayusuto@users.noreply.github.com> +Date: Tue Nov 24 23:16:05 2020 +1000 + + Update README.md + +commit 263146a6ab37fecc9356aebeff0e7dfb7cdb389e +Merge: 85d06a98 36fa0374 +Author: Alexander Bayusuto Wanengkirtyo +Date: Tue Nov 24 23:13:33 2020 +1000 + + feedback response + +commit 370dbf53b545786c38263c3f8bd11609334a7bdf +Author: Arushi Mahajan +Date: Tue Nov 24 23:11:23 2020 +1000 + + Updating the Readme with updated images path + +commit 0df9034aac77f0aff4308b329023719e0ec9e47c +Author: Arushi Mahajan +Date: Tue Nov 24 23:10:08 2020 +1000 + + Pushing images to new folder + +commit 85d06a98291f89409edc0de6644ccf2bd9969464 +Author: Alexander Bayusuto Wanengkirtyo +Date: Tue Nov 24 23:09:31 2020 +1000 + + feedback response + +commit be37fba115b0eaf13a2ff08da6e9e4de54109ec3 +Author: Arushi Mahajan +Date: Tue Nov 24 23:07:52 2020 +1000 + + Removing images from the main directory + +commit b2ce49e2eda31e3e80e63cae8fc767ac3db6c0d7 +Author: Alexander Bayusuto Wanengkirtyo +Date: Tue Nov 24 22:54:43 2020 +1000 + + feedback response + +commit fb112ac9da3ed51715debbbb4be540375ba1ec3e +Author: arushi-mah <73738016+arushi-mah@users.noreply.github.com> +Date: Tue Nov 24 22:52:50 2020 +1000 + + Create Readme.md + +commit aa3e5d638f83a6c1948b38b06b0b169ca669c721 +Author: Thomas-TTC <69441941+Thomas-TTC@users.noreply.github.com> +Date: Tue Nov 24 21:02:21 2020 +1000 + + convert links to citations + +commit d8e5cbebc3e985e86a80575135093881cc74182a +Author: thomas +Date: Tue Nov 24 20:54:12 2020 +1000 + + comment main file and modify indent for code header block + +commit 2c9d1b3ec6caacfcf20b5b16f87a9dc413a4c46f +Author: thomas +Date: Tue Nov 24 20:40:51 2020 +1000 + + add code header block + +commit 177545a406106dd8c2ddbb8feaeb363ebd687166 +Author: Thomas-TTC <69441941+Thomas-TTC@users.noreply.github.com> +Date: Tue Nov 24 20:09:12 2020 +1000 + + Update the Pull Request to correct branch + + The pull request should now be in the topic-recognition branch + +commit 853508acdf7f366f840a7373b3da080d2815a679 +Author: dannytong +Date: Tue Nov 24 19:08:32 2020 +1000 + + Solved conflict + +commit dcbd3a9836fc3404e773108a756eb9400f4940e2 +Author: dannytong +Date: Tue Nov 24 18:58:52 2020 +1000 + + Solve Conflict testing + +commit 2881e6aebca9b1a3c1f18e9e506267e93a87a524 +Merge: 821aa1d3 e5f30d5e +Author: Shakes +Date: Tue Nov 24 18:36:41 2020 +1000 + + Merge pull request #84 from Dattatreya-45586327/topic-recognition + + Implementation of UNET on ISIC data set for generating lesion segmentation and comparing with actual in terms of Dice Score + +commit 821aa1d3171ef304c432928ed32547669a570f7b +Merge: a2f73350 2c32628e +Author: Shakes +Date: Tue Nov 24 18:33:17 2020 +1000 + + Merge pull request #82 from Striiipes/topic-recognition + + Topic recognition - s45339747 + +commit a2f7335059b88734c79c428da2d64bea81e47370 +Merge: fb3edf0a 8403ad3f +Author: Shakes +Date: Tue Nov 24 18:31:32 2020 +1000 + + Merge pull request #80 from Wen-Hao-18/topic-recognition + + Topic recognition + +commit f1147cc057da0aaaf82ce8f3d6d26f31d3d65de5 +Merge: 20d8f8d8 fb3edf0a +Author: George Mulhearn <57472912+gmulhearn@users.noreply.github.com> +Date: Tue Nov 24 18:20:56 2020 +1000 + + Merge branch 'topic-recognition' into topic-recognition + +commit f6d48e87f3cd0f7d25ae7b9200c86a884f801667 +Author: ArunHarish +Date: Tue Nov 24 18:17:37 2020 +1000 + + Added code header block and checked for any unused variable. Cannot find any. + +commit 92ba27db2653c7aeb3572df4557e9379c979e4d1 +Author: yorkequ98 +Date: Tue Nov 24 16:15:22 2020 +0800 + + Deleted .idea files. + +commit fb3edf0a758aa8e87e83363323c129674487cb55 +Merge: 59313d8a a7eb11b8 +Author: Shakes +Date: Tue Nov 24 18:06:07 2020 +1000 + + Merge pull request #178 from dylanUQ/topic-recognition + + OASIS Brain Segmentation with Improved UNet (Dhilan Singh, 44348724) + +commit 59313d8a6acb5d21b329a920246210dc58100258 +Merge: 0db2b375 e330994d +Author: Shakes +Date: Tue Nov 24 18:01:37 2020 +1000 + + Merge pull request #177 from salim45018332/topic-recognition + + Topic recognition - ISICs2018 U-Net + +commit 0db2b375002e8429423c60bc210645d962d966c0 +Merge: 692ed052 2f9dc9fd +Author: Shakes +Date: Tue Nov 24 17:50:41 2020 +1000 + + Merge pull request #174 from sambethune/topic-recognition + + Topic recognition + +commit 692ed0525ea86157cf1feebdf1e65d3692cd40cc +Merge: 2b041f59 8787543d +Author: Shakes +Date: Tue Nov 24 17:47:04 2020 +1000 + + Merge pull request #173 from izzygpeters/topic-recognition + + ISIC data segmentation using UNet + +commit 2b041f593d6b1df2a8d94ca33a6f3a236d3f03cd +Merge: 4eb5c493 2e4d5436 +Author: Shakes +Date: Tue Nov 24 17:45:25 2020 +1000 + + Merge pull request #172 from MajorRedux/topic-recognition + + Topic recognition + +commit 4eb5c493daa688f24e9b8fff2226d64d2211b437 +Merge: 3698cfda b85c1394 +Author: Shakes +Date: Tue Nov 24 17:35:39 2020 +1000 + + Merge pull request #171 from Claire1217/topic-recognition + + Topic recognition + +commit 3698cfda1c60cde3c91645ee1a8335336bb9c435 +Merge: b07bba33 38f5b155 +Author: Shakes +Date: Tue Nov 24 17:32:14 2020 +1000 + + Merge pull request #170 from matt-jones27/topic-recognition + + 44335706 ISICs Segmentation + +commit 03dc161723cbf1fa2c808a0d4645b078745752aa +Author: ArunHarish +Date: Tue Nov 24 17:21:57 2020 +1000 + + Removed jupyter notebook used to test the training algorithm. + +commit b07bba332fac72ec80a42fb54f5012866edfe9af +Merge: 5c4f3eca 83b29825 +Author: Shakes +Date: Tue Nov 24 16:14:43 2020 +1000 + + Merge pull request #164 from yeksel/topic-recognition + + s4361465 Kelsey McGahan + +commit d7c2629347f18dc027fab4cfd6d23fb2872f7c28 +Author: ArunHarish +Date: Tue Nov 24 16:13:06 2020 +1000 + + Removed model files. + +commit 5c4f3eca92979c019c89b3aeeebe132287f8ac90 +Merge: 8a5227d0 1f72138c +Author: Shakes +Date: Tue Nov 24 16:10:59 2020 +1000 + + Merge pull request #162 from ldgrp/topic-recognition + + OASIS Brain DCGAN + +commit 8a5227d0c3a911bbfc723a62e1f79fab01688d8a +Merge: 2286aec9 325dab9e +Author: Shakes +Date: Tue Nov 24 16:07:15 2020 +1000 + + Merge pull request #161 from dhealey95/topic-recognition + + ISICs segmentation with U-Net (Declan Healey) + +commit 2286aec988f61feb8be24ae9064776106315f8fe +Merge: b457b810 d4a85dac +Author: Shakes +Date: Tue Nov 24 15:43:15 2020 +1000 + + Merge pull request #158 from PeterDinhNgo/topic-recognition + + DCGAN on OASIS Brain - Peter Ngo + +commit 73eb47a5d173622ce9252d5be5016944852bdb7b +Author: danielzhangau <740807262@qq.com> +Date: Tue Nov 24 15:27:57 2020 +1000 + + rm model file + +commit b457b810f10f5156fcf5c0361a851d97d6db54a5 +Merge: f7691cdc b47c37f5 +Author: Shakes +Date: Tue Nov 24 15:03:06 2020 +1000 + + Merge pull request #119 from JosephAaron3/topic-recognition + + Improved Unet with ISIC 2018 dataset + +commit f7691cdc837bd7e18895fe7b1bde93b3972a1036 +Merge: cd2bb9c6 fa06c305 +Author: Shakes +Date: Tue Nov 24 14:39:46 2020 +1000 + + Merge pull request #155 from jaydonhansen/topic-recognition + + Topic recognition - ISIC 2018 Segmentation with UNet + +commit cd2bb9c692805afae43c3b4df6e2cfa90bf9f06b +Merge: c37bc16b 493c4fe0 +Author: Shakes +Date: Tue Nov 24 14:32:23 2020 +1000 + + Merge pull request #152 from reecesomethingjay/topic-recognition + + Topic recognition - OASIS-DCGAN for COMP3710 Assignment + +commit c37bc16b57a450950ca9179e5abfddd37011db79 +Merge: 4613edee a32e8f7a +Author: Shakes +Date: Tue Nov 24 14:12:47 2020 +1000 + + Merge pull request #144 from trisbsamson/topic-recognition + + Topic recognition + +commit 4613edee3644daf8bcfd652dfaa173fb183d8bde +Merge: 1703c21c bc16936a +Author: Shakes +Date: Tue Nov 24 12:51:50 2020 +1000 + + Merge pull request #137 from ZordMaloox/topic-recognition + + Topic recognition - 4467213 + +commit c6393478cdccbbbe04fdb023dc3de0bf6b109e97 +Author: barry +Date: Tue Nov 24 11:20:31 2020 +1000 + + added the README.md file to the recognition folder in the toic-recognition branch + +commit 1703c21c380ef19ed3bef6904179abe7274b19f1 +Merge: 6e5d1573 8b7a274b +Author: Shakes +Date: Tue Nov 24 11:03:25 2020 +1000 + + Merge pull request #134 from vincentiusadityas/topic-recognition + + Topic recognition - ISIC 2018, Improved UNet - S4561009 + +commit 6e5d157366dbf3144e791a960e23bc860a85c10f +Merge: 88544263 e6991c02 +Author: Shakes +Date: Tue Nov 24 11:01:09 2020 +1000 + + Merge pull request #133 from w895540347/topic-recognition + + s4553987_Segment the ISICs data set with the Improved UNet + +commit 8854426325a0673025c832f92fda1fe7691a32e9 +Merge: a3f51a26 0bd02026 +Author: Shakes +Date: Tue Nov 24 10:57:01 2020 +1000 + + Merge pull request #132 from ChrisBailey/topic-recognition + + Topic recognition - ISICs UNet - 45576430 + +commit b47c37f595b10e056b1d5475c12223f68466bcd5 +Author: Joseph Menesch +Date: Tue Nov 24 10:50:11 2020 +1000 + + Deleted tb event logs + +commit 1b7948985b003d944a7f3c1be829e5597e1f5fef +Author: Pragatheeswari-dev <65264601+Pragatheeswari-dev@users.noreply.github.com> +Date: Tue Nov 24 09:15:56 2020 +1000 + + Update - gan_model.py. Removed Error in header block + +commit d64e517f3abff217b22d17584e526257e7a2918c +Author: Pragatheeswari-dev <65264601+Pragatheeswari-dev@users.noreply.github.com> +Date: Tue Nov 24 09:13:39 2020 +1000 + + Update gan_model.py with header block + +commit a3f51a26e0f71ffe0bc9a23a06202b7411e22d66 +Merge: bbd0af3e 540f571b +Author: Shakes +Date: Tue Nov 24 00:52:49 2020 +1000 + + Merge pull request #127 from Xin-Qi/topic-recognition + + Topic recognition(ISICs Segmentation) merge request + +commit bbd0af3e4d65685e7ee2702d4e718eac22aa7f84 +Merge: 037213b0 e712270a +Author: Shakes +Date: Tue Nov 24 00:43:51 2020 +1000 + + Merge pull request #124 from smitraDA/topic-recognition + + To Segment the ISIC data set with the UNET, in accordance that the predicted segmentation response with the test data set should have a minimum dice co-efficient of 0.7 + +commit 037213b0cd767ebe8bfeeade9a92a81a13b8bda9 +Merge: dc69f203 6314e800 +Author: Shakes +Date: Tue Nov 24 00:41:01 2020 +1000 + + Merge pull request #123 from ecutm1/topic-recognition + + Topic recognition + +commit dc69f2031fd3d58c74a32225daa891d1a0f7d6b8 +Merge: 43eaf983 b32fde6d +Author: Shakes +Date: Tue Nov 24 00:38:49 2020 +1000 + + Merge pull request #122 from maxhornigold/topic-recognition + + Topic recognition + +commit 43eaf983d617b753ce802a903a69386ffc7f9928 +Merge: 759a716f 14f5d34a +Author: Shakes +Date: Tue Nov 24 00:35:46 2020 +1000 + + Merge pull request #121 from Yi0724/topic-recognition + + Topic recognition + +commit 759a716f4ab45a83df39ae410fb9531b3bde5586 +Merge: 30453407 2851921e +Author: Shakes +Date: Tue Nov 24 00:34:02 2020 +1000 + + Merge pull request #120 from Ryan-RuixiangMa/topic-recognition + + Topic recognition - DCGAN_Ryan + +commit 30453407c062338470a35f27fef39b3e59ae3d20 +Merge: c05bda2b 22a7a3b4 +Author: Shakes +Date: Tue Nov 24 00:29:09 2020 +1000 + + Merge pull request #118 from Peiran66/topic-recognition + + Topic recognition + +commit c05bda2b106aea7bdc5e8c592147b76e8aa6cbd3 +Merge: d8bc6454 a2d6807e +Author: Shakes +Date: Tue Nov 24 00:26:44 2020 +1000 + + Merge pull request #117 from tusharvinayaraj/topic-recognition + + Topic recognition s4608425 + +commit d8bc64543b1d980baa82fc721236fa7e138019d6 +Merge: 891aad9c dca6fbe2 +Author: Shakes +Date: Tue Nov 24 00:24:25 2020 +1000 + + Merge pull request #116 from yurisasc/topic-recognition + + Oasis DCGAN - 45445657 + +commit 891aad9c6394f45518be215a25fb41312537ef93 +Merge: d65e6314 3d5aca90 +Author: Shakes +Date: Tue Nov 24 00:21:52 2020 +1000 + + Merge pull request #114 from Raghav-Dhanuka/topic-recognition + + Topic recognition - ISICs Dataset with Improved U-Net + +commit d65e6314e255f5dc6837d7f024f3d557c116a22a +Merge: 5d6a3a07 a02c4ed5 +Author: Shakes +Date: Tue Nov 24 00:18:27 2020 +1000 + + Merge pull request #112 from TungChinYang/topic-recognition + + Topic recognition + +commit 5d6a3a07c1c4796b686b2b6024431154826968f1 +Merge: b77ea2ab 5dd4ffc6 +Author: Shakes +Date: Tue Nov 24 00:15:48 2020 +1000 + + Merge pull request #111 from dreamgonsalves/topic-recognition + + DCGAN_DreamGonsalves_45970823 + +commit e5938b0a5029e339db0c30626ae20f87cc28bbf4 +Author: dannytong +Date: Tue Nov 24 00:13:11 2020 +1000 + + Added a main function base on feedback + +commit b77ea2ab733dd40e1cb1bf1f0e0ce85d855ee14c +Merge: f1c7e785 5491edb0 +Author: Shakes +Date: Mon Nov 23 23:27:57 2020 +1000 + + Merge pull request #108 from Sid-Uniyal/topic-recognition + + Topic recognition + +commit f1c7e785e9d8057c9757fdd97172ec5ddd38d44f +Merge: 8cc13663 405b3d76 +Author: Shakes +Date: Mon Nov 23 23:25:24 2020 +1000 + + Merge pull request #107 from 1665446266/topic-recognition + + Topic recognition + +commit 8cc1366335da2d469deafcb6ebe2f807e1bf743f +Merge: 2a6d9d03 335b44a7 +Author: Shakes +Date: Mon Nov 23 23:21:47 2020 +1000 + + Merge pull request #106 from agrawal-s/topic-recognition + + Topic recognition - DCGAN + +commit 2a6d9d03a5b679d873ebbfd5692db83068f48212 +Merge: 51a3e0be 8151c473 +Author: Shakes +Date: Mon Nov 23 23:18:16 2020 +1000 + + Merge pull request #105 from Marcozgz/topic-recognition + + Topic recognition + +commit 51a3e0beea048282924a64119b3e865ee323a1c9 +Merge: 44e626a9 3e11ea90 +Author: Shakes +Date: Mon Nov 23 23:15:01 2020 +1000 + + Merge pull request #104 from xiaosun1995/topic-recognition + + Improved U-Net model for ISICs data set (45642586) Topic-recognition + +commit 44e626a9e895d366763bf0f49a4f411c7599604a +Merge: 55f41aa6 225b2512 +Author: Shakes +Date: Mon Nov 23 23:03:01 2020 +1000 + + Merge pull request #101 from mcost45/topic-recognition + + Improved UNet Implementation for ISICs Data + +commit 55f41aa6b4ed3d33ca68a1aa73949590b921ce08 +Merge: 7677d534 3d39b221 +Author: Shakes +Date: Mon Nov 23 23:00:19 2020 +1000 + + Merge pull request #100 from Echozhe/topic-recognition + + Improved Unet for ISICs dataset /s4555042 + +commit 8403ad3f9c8fec0f6f87a60cc95369ebe9a89d09 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Mon Nov 23 20:49:12 2020 +0800 + + move train_result2 into image folder + +commit e2954ce7fada6a003c80dd02b48267044d2e03b9 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Mon Nov 23 20:48:17 2020 +0800 + + move train_result1 into image folder + +commit bd16f1d0e9edf49b84d3dff1997fce28068cf2cf +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Mon Nov 23 20:47:23 2020 +0800 + + move loss_visu.png into image folder + +commit dbcf56f1720e64b4b5bec595fed4ef5012c930fa +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Mon Nov 23 20:46:34 2020 +0800 + + move evaluation.jpg into image folder + +commit b27ea29fd16035053f6c1af1b5316ecd359e069f +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Mon Nov 23 20:45:25 2020 +0800 + + Delte accuracy_visu.png and move it into image folder + +commit 8e4fc902071bcef292ba1d1cb824ef9b4001d57c +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Mon Nov 23 20:44:24 2020 +0800 + + Delete predict.png and move it into image folder + +commit 2400d550b8c509d91b486bcd2e1dd55100413d1b +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Mon Nov 23 20:42:18 2020 +0800 + + image show in subfolder + +commit fd180cf5be3e6be1f9de53a2150854ffac470a12 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Mon Nov 23 20:38:03 2020 +0800 + + move image into subfolder + +commit d4a85dace9f6545bc83439b02948194b58d7d7b5 +Author: PeterDinhNgo <59048760+PeterDinhNgo@users.noreply.github.com> +Date: Mon Nov 23 20:45:48 2020 +1000 + + removed redundant tf.function() from driver + +commit 133c90dfd8f00f115855416c537753eb7a726fc1 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Mon Nov 23 17:40:25 2020 +0800 + + create image folder + +commit e5f30d5e2769b3a0c2b2ab782e7f1a0f69030d45 +Author: Dattatreya Majumdar +Date: Mon Nov 23 19:29:24 2020 +1000 + + Removing unnecessary imports from this file + +commit d34d142be6202c9c2b1a2994d8993a700e01dcf4 +Merge: 350ea5f1 c40771d0 +Author: Md Abdul Bari +Date: Mon Nov 23 19:21:31 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/s4542006/PatternFlow into topic-recognition + +commit 350ea5f1c892fda285ef54c9b059c300127ff0e6 +Author: Md Abdul Bari +Date: Mon Nov 23 19:19:02 2020 +1000 + + batch norm before final activation dropped + +commit c40771d03a01d241279160975e96face5ae46df4 +Author: Md Abdul Bari (ID 45420065) <72848988+s4542006@users.noreply.github.com> +Date: Mon Nov 23 19:14:15 2020 +1000 + + Delete plot_2.png + + this image is added to a separate sub-directory + +commit 7007e8a6dff2feb241af24616990690e4da8c15f +Author: Md Abdul Bari (ID 45420065) <72848988+s4542006@users.noreply.github.com> +Date: Mon Nov 23 19:13:45 2020 +1000 + + Delete plot_1.png + + this image is added to a separate sub-directory + +commit ecff2d12aafa89c747c70258272e561c52b059c7 +Author: Md Abdul Bari (ID 45420065) <72848988+s4542006@users.noreply.github.com> +Date: Mon Nov 23 19:12:55 2020 +1000 + + remove image + + this image is added to a separate sub-directory + +commit 8986238aae31b18ae3b1c88f7930ae2ea7ddd18c +Author: Md Abdul Bari (ID 45420065) <72848988+s4542006@users.noreply.github.com> +Date: Mon Nov 23 19:09:13 2020 +1000 + + image source path updated + + sub-directory created for .png files and as such, source paths for the images used are updated. + +commit 2c32628e0e7bd6995c757697600ab64154ad8563 +Author: Jonathan +Date: Mon Nov 23 19:04:19 2020 +1000 + + Fixed unused import statements. + +commit 05468979ee36225084c902019f5163b7ec8720b5 +Author: Jonathan +Date: Mon Nov 23 19:02:30 2020 +1000 + + Fixed unused imports. + +commit ea3a7cb6e97242011102926d91e8066e53995640 +Author: Jonathan +Date: Mon Nov 23 19:00:13 2020 +1000 + + Removed import statements as requested. + +commit c828a69fbb00dd64d24a6f68871f451f8f4d3045 +Author: Md Abdul Bari +Date: Mon Nov 23 18:58:59 2020 +1000 + + images removed + +commit 075a19818212a048ab05580e246e0e097802f747 +Author: dannytong +Date: Mon Nov 23 18:52:32 2020 +1000 + + Added commit and reference base on the feedback + +commit 67e8c1ba8b31b30b8db411b3eeb080a63cff2c8d +Author: Md Abdul Bari +Date: Mon Nov 23 18:50:12 2020 +1000 + + move .png files to image sub-directory + +commit edab8f4478b846ba0da7fe292f5b157b8ca3aa36 +Author: Md Abdul Bari (ID 45420065) <72848988+s4542006@users.noreply.github.com> +Date: Mon Nov 23 18:27:59 2020 +1000 + + Create sub-directory for containing images + +commit 25efede4e7ef8e1fba2db57641ee09b3a72df55f +Author: Md Abdul Bari (ID 45420065) <72848988+s4542006@users.noreply.github.com> +Date: Mon Nov 23 18:12:52 2020 +1000 + + Delete loss_curve.png + +commit 0053e42f90ba49dbe535d7968532065a915be722 +Author: Md Abdul Bari (ID 45420065) <72848988+s4542006@users.noreply.github.com> +Date: Mon Nov 23 18:10:31 2020 +1000 + + move loss_curve to image sub-directory + +commit 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Nov 23 17:35:33 2020 +1000 + + Adding sample ISIC predicted plot in Images folder + +commit e182a95641c38db71593601129aa5edc0e1192f6 +Author: Dattatreya Majumdar +Date: Mon Nov 23 17:30:39 2020 +1000 + + Adding Dice Loss Plots in Images folder + +commit fae8791eb6a4c8c38fad47431c6b23ad24c25c0a +Author: Dattatreya Majumdar +Date: Mon Nov 23 17:27:28 2020 +1000 + + Adding Code execution snippet to Images folder + +commit 416f5ff1096bdc69cead5bebd4d2909807c8d81e +Author: Dattatreya Majumdar +Date: Mon Nov 23 17:24:43 2020 +1000 + + Adding accuracy plots to Images folder + +commit 6d87027b2b379b1816088279110792d0d525ac76 +Author: Dattatreya Majumdar +Date: Mon Nov 23 17:21:17 2020 +1000 + + Removing remaining images from main directory + +commit 5110532492d3d0e003fb82275c159fbc0dfd4779 +Author: Dattatreya Majumdar +Date: Mon Nov 23 17:16:39 2020 +1000 + + Code execution snapshot removed + +commit 8b73c65ece775b8844d6c339d37c81b23714b33b +Author: Dattatreya Majumdar +Date: Mon Nov 23 17:12:46 2020 +1000 + + Accuracy plot removed + +commit 89fccca45ea6fd1a8c91249c225f6aba00c4d1a1 +Author: Dattatreya-45586327 <72792784+Dattatreya-45586327@users.noreply.github.com> +Date: Mon Nov 23 17:08:38 2020 +1000 + + Update Readme.md + +commit 537a06ab6d2e4d7428b90151bb2d0804c765f7c0 +Author: Dattatreya-45586327 <72792784+Dattatreya-45586327@users.noreply.github.com> +Date: Mon Nov 23 17:07:32 2020 +1000 + + Create Readme.md + +commit c6003e4c1cda04a6c96de0a99ff793cc6f6ae429 +Author: Dattatreya Majumdar +Date: Mon Nov 23 17:03:50 2020 +1000 + + Updating modified dice coefficients for test images + +commit c7216159b7fbc5100930891287573428e93f31bb +Author: Dattatreya Majumdar +Date: Mon Nov 23 16:58:53 2020 +1000 + + Unnecessary package imports removed from Driver Script + +commit 7677d534a7f3a69056b4c883bbee41047082d736 +Merge: 1c5c9390 02c1ebac +Author: Shakes +Date: Mon Nov 23 16:55:02 2020 +1000 + + Merge pull request #95 from zac-oar-uq/topic-recognition + + Topic recognition - Zachary Oar (45314669) - ISICs data set with the Improved UNet + +commit 02c1ebac4da62eec3741ba1b4c30461e10352f04 +Author: zachary_oar +Date: Mon Nov 23 16:47:55 2020 +1000 + + Reverted gitignore back 30 commits, should resolve all conflicts + +commit 3bf6fbd95d77d80966271b225f7ee866897da16f +Author: zachary_oar +Date: Mon Nov 23 16:41:59 2020 +1000 + + Removed extra newline from end of the .gitignore + +commit e080dd5e3b3ed73053e02a1ea1b6f3423a78b752 +Author: zachary_oar +Date: Mon Nov 23 16:37:36 2020 +1000 + + Removed image folder exlusions from the .gitignore to solve conflicts + +commit 1c5c9390817e9ae6461dc99265979e25ff00b77b +Merge: b38e6387 eb5784a1 +Author: Shakes +Date: Mon Nov 23 16:32:02 2020 +1000 + + Merge pull request #97 from xD-Jie/topic-recognition + + Topic recognition/DCGAN in OASIS + +commit b38e63873ff7224543d4cdfb210bd3af958a6a63 +Merge: 5500eef1 83d1a3ab +Author: Shakes +Date: Mon Nov 23 16:20:14 2020 +1000 + + Merge pull request #94 from deliciousturtle/topic-recognition + + Topic recognition + +commit 5500eef18cf6f4f0f6152e22ce3b47a6253855e5 +Merge: 9ad4cb25 93fcee78 +Author: Shakes +Date: Mon Nov 23 13:44:28 2020 +1000 + + Merge pull request #93 from Lei-Wang-Amanda/topic-recognition + + Topic recognition + +commit 9ad4cb2589914d165f73348b1dffc059f79187bc +Merge: 58b064d9 a1ae13d1 +Author: Shakes +Date: Mon Nov 23 13:42:49 2020 +1000 + + Merge pull request #92 from XiaoqiZhuang/topic-recognition + + Topic recognition + +commit 58b064d96503df7b4e116dfbf4c154ef6e71fb38 +Merge: ce517033 9c90877b +Author: Shakes +Date: Mon Nov 23 13:40:21 2020 +1000 + + Merge pull request #91 from tduval840/topic-recognition + + Topic recognition - Theo Duval (44792701) DCGAN on OASIS Dataset + +commit 676dc95dc033f5dc682bf071b9f06546605767e3 +Merge: 05ed63e5 35ecc498 +Author: Shakes +Date: Mon Nov 23 13:36:24 2020 +1000 + + Merge pull request #90 from k-kharoub/master + + s4575970 Improved u-net on oa-sis dataset + +commit ce517033cda3e46ac87a5710a37330275cd7b526 +Merge: e29404e7 6cb2b268 +Author: Shakes +Date: Mon Nov 23 13:05:50 2020 +1000 + + Merge pull request #83 from Shivangiii/topic-recognition + + Topic recognition S4601130 + +commit 6cb2b268e05a89e41bef066f378fd8b74a271410 +Merge: b77cac44 d7c3c048 +Author: unknown +Date: Mon Nov 23 12:55:53 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/Shivangiii/PatternFlow into topic-recognition + +commit b77cac44c67f82a43541152db5710b89b29c8079 +Author: unknown +Date: Mon Nov 23 12:55:33 2020 +1000 + + changes incorporated: header blocks added, markdown used in driver.ipynb + +commit e29404e7c03f815be4daeb30300c1156c4f50197 +Merge: f9fac089 93f836e8 +Author: Shakes +Date: Mon Nov 23 12:45:37 2020 +1000 + + Merge pull request #86 from Erik-Brand5/topic-recognition + + Topic recognition OAI_GAN 44323495 + +commit f9fac0894ba21fe9e630e403f7dbe41285345b0d +Merge: 83d98499 fbb62a2d +Author: Shakes +Date: Mon Nov 23 12:36:44 2020 +1000 + + Merge pull request #85 from nthompson97/topic-recognition + + Topic recognition + +commit 83d1a3ab65476d548f9168e70a3e379cf303853a +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Sun Nov 22 23:54:30 2020 +1000 + + Update classify_laterality.py + + Removed commented out code that is no longer needed and cleaned up some comments. + +commit 86d97b8f1bdc36630d91c797d09a2bdc439325b2 +Merge: 06b971ff 83d98499 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Sun Nov 22 23:49:58 2020 +1000 + + Merge branch 'topic-recognition' into topic-recognition + +commit d53325387dc91847227637a002da8ad3cf4ad47f +Author: Zachary Oar +Date: Sun Nov 22 19:40:41 2020 +1000 + + Updates from feedback: Added quantitative results to README; Put driver script code into a main block + +commit 8787543db3e493a7398902abbf57f000efc2239d +Author: izzygpeters <72848958+izzygpeters@users.noreply.github.com> +Date: Sun Nov 22 19:01:39 2020 +1000 + + Moved driver script logic into __main__ function + +commit 83d9849968573b52748bf65f2ebaca743e1e4d72 +Merge: 5b95c6bf 9daa4b3e +Author: Shakes +Date: Sun Nov 22 18:11:55 2020 +1000 + + Merge pull request #77 from DonghongZhuang/topic-recognition + + Topic recognition : knee-classification + +commit 540f571bb9c33d1423a86365777bcf2c7f6f3c8a +Author: Xin-Qi <34679917+Xin-Qi@users.noreply.github.com> +Date: Sun Nov 22 15:09:46 2020 +0800 + + Delete .DS_Store + +commit b3fab8e1e27ef66674978e4ad130af6a8caf16e8 +Author: Xin-Qi <34679917+Xin-Qi@users.noreply.github.com> +Date: Sun Nov 22 15:08:34 2020 +0800 + + Create .gitignore + +commit e62c0fae639744f789fb47b56f8fbd28329b399b +Author: danielzhangau <740807262@qq.com> +Date: Sun Nov 22 16:13:29 2020 +1000 + + update the changed file inside file as well + +commit 8c2cd122562b7c4df796d8be6a18fb7502be9830 +Author: danielzhangau <740807262@qq.com> +Date: Sun Nov 22 15:57:53 2020 +1000 + + rm dupulicate file + +commit 1ba7bd1f3e214ae615bb74cf2e354a36a4fef092 +Author: danielzhangau <740807262@qq.com> +Date: Sun Nov 22 15:55:32 2020 +1000 + + update file name style follow python file and folder naming convention e.g. lorem_ipsum_123_abc.py + +commit 3b4a2a934a269756c68374ea495e0b9bd02e2232 +Author: Paiwand Karem <69803724+paiwandkarem@users.noreply.github.com> +Date: Mon Nov 16 11:42:52 2020 +1000 + + Update README.MD + +commit 449ee4b65c5a235a2bd39d5443e7a2602981d140 +Author: Paiwand Karem <69803724+paiwandkarem@users.noreply.github.com> +Date: Mon Nov 16 11:42:01 2020 +1000 + + Update README.MD + + Final updates to README + +commit d47d25322a1c1bcb5f51b95f112701917238e6c3 +Author: Paiwand Karem <69803724+paiwandkarem@users.noreply.github.com> +Date: Mon Nov 16 11:24:24 2020 +1000 + + Update README.MD + + Writing README still. Nearly done, am writing up the final evaluation of the model and including images. + +commit c865cc5f8cfe99aa6d8fcbdc11c8d3143f59f3cc +Author: Paiwand Karem <69803724+paiwandkarem@users.noreply.github.com> +Date: Mon Nov 16 11:10:01 2020 +1000 + + Update README.MD + + Added Generator and Discriminator explanations + +commit a744dcd2ac75df8460e4dbb015bd4ae630c63022 +Author: Paiwand Karem +Date: Mon Nov 16 10:43:55 2020 +1000 + + Added SSIM and Loss graphs, renamed summary of models due to parse error + +commit abfaa74b2ff2464e181011efbc556a238746a97e +Author: Paiwand Karem +Date: Mon Nov 16 10:34:33 2020 +1000 + + Created model summaries for each sub model + +commit a29e571dd37abdfc54b8413136b5e57b87d37b12 +Merge: e93e8ad2 ffcb1c2c +Author: Paiwand Karem +Date: Mon Nov 16 10:32:41 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/paiwandkarem/PatternFlow into topic-recognition + +commit e93e8ad27011daa730eb4bf6cb0d51121d512932 +Author: Paiwand Karem +Date: Mon Nov 16 10:32:31 2020 +1000 + + Created model summaries for each sub model + +commit ffcb1c2c715ff9a86b777377767738cdb4ce5bf3 +Author: Paiwand Karem <69803724+paiwandkarem@users.noreply.github.com> +Date: Mon Nov 16 10:30:44 2020 +1000 + + Update README.MD + +commit fd9948b1e4dcfb0663c75ae443e147aa6455e55e +Author: Paiwand Karem <69803724+paiwandkarem@users.noreply.github.com> +Date: Mon Nov 16 09:44:33 2020 +1000 + + Update README.MD + + Completed part of README + +commit d5156d341afe71c85611122649aaa934b09a840f +Author: Paiwand Karem <69803724+paiwandkarem@users.noreply.github.com> +Date: Mon Nov 16 08:55:04 2020 +1000 + + Create README.MD + + Testing existence of README.md + +commit 49f8b292b2da9b399159fb646a5b5a8740c2486d +Author: Paiwand Karem +Date: Mon Nov 16 08:36:59 2020 +1000 + + Final commit for driver, processing and model going to test run on another machine + +commit a6482f1997ce262a63cd14aaa5cffa956fdca327 +Author: Paiwand Karem +Date: Mon Nov 16 07:50:02 2020 +1000 + + Created driver, processing and model files to run outside of jupyter, updated model, few spell checks + +commit 654f50fd781cc4d0fdb24b5b1d73e432da17fc81 +Author: Paiwand Karem +Date: Mon Nov 16 07:21:42 2020 +1000 + + Fixed name of file processing.py spelling error updated + +commit e3277d3e745d7faacb93b2c167bba80f8260cf30 +Author: Paiwand Karem +Date: Mon Nov 16 07:20:57 2020 +1000 + + Fixed name of file processing.py spelling error + +commit d354ff6fda8179dca7d3e65fe4b25cef45e2296e +Author: Paiwand Karem +Date: Mon Nov 16 07:14:23 2020 +1000 + + Completed processing.py + +commit 37fa5b10c2091b3c7e73b2c177485356aa606668 +Author: Paiwand Karem <69803724+paiwandkarem@users.noreply.github.com> +Date: Mon Nov 16 06:02:15 2020 +1000 + + Delete image_at_epoch_0007.png + + Unneeded image + +commit 18a89422e6c5922d6873e7b1892d9234c0218224 +Author: Paiwand Karem +Date: Sun Nov 15 23:50:58 2020 +1000 + + Updating for cross computer access + +commit f7bc383a874b59dd6e8149f9f4c2ea1238f85e78 +Author: Paiwand Karem +Date: Sun Nov 15 23:23:37 2020 +1000 + + Updated directories on jupyter file for saving plots + +commit fe1d994aa8005814c9a7eb889c96957161bf9586 +Author: Paiwand Karem +Date: Sun Nov 15 23:21:11 2020 +1000 + + Added SSIM, tweaked model per Radford's Paper and Tensorflow tutorial on DCGAN's. Updated generate methods, updated loss. Now upto driver file and readme + +commit c5e8e08ee643ef4dc979310afc8997dd5dd192a3 +Author: Paiwand Karem +Date: Sun Nov 15 17:19:01 2020 +1000 + + Working model, need to make SSIM and driver now + +commit 6b092663bd0da7d6594d92d4ec51ada1e97b6880 +Author: Paiwand Karem +Date: Sun Nov 15 16:20:52 2020 +1000 + + Ran into some file issues causing weird runs. Edited discriminator to have more filtered layers, created a train_step override function. Cut down code at the start as I don't need the seg datasets. + +commit cd8413192cbd462d77734bf5a0619abbbb7347f7 +Author: Paiwand Mohammad Karem +Date: Wed Nov 11 09:05:25 2020 +1000 + + Fixed loss functions, finished generator model, made another image generating function for predicted images + +commit 35018fbc2e6b132f30b40afb2f9f79d0c1d1a899 +Author: Paiwand Mohammad Karem +Date: Wed Nov 11 07:00:23 2020 +1000 + + Fixed some syntax and bugs within the generator model + +commit 5ddce9c44a3c97243b40983e488d76af255b0db5 +Author: Paiwand Mohammad Karem +Date: Wed Nov 11 05:19:12 2020 +1000 + + Added loss graph function, and casted models to variables, about to create training function + +commit 6f2d1ca1008cc989df41376e302d51eb908527be +Author: Paiwand Mohammad Karem +Date: Wed Nov 11 04:44:52 2020 +1000 + + Created a preliminary generator, still to be tested + +commit 2bdec0a54f9fa4156409d84aab76eebb3020939e +Author: Paiwand Mohammad Karem +Date: Wed Nov 11 04:12:26 2020 +1000 + + made loss function work for both generator and discriminator, edited discriminator to have another conv layer + +commit 32647dfc1a566edcd17f64d8a0e3df5f3cf2a646 +Author: Paiwand Mohammad Karem +Date: Tue Nov 10 04:56:27 2020 +1000 + + Updated discriminator model, beginning the creation of generator + +commit b8e616b764c1f9f6ecf00b4efb4c1e4e6285f492 +Author: Paiwand Mohammad Karem +Date: Tue Nov 10 03:57:05 2020 +1000 + + Completed discriminator loss function + +commit ccb1f3d684175e1e0d1e3ecd3c08a49499a268d8 +Author: Paiwand Mohammad Karem +Date: Tue Nov 10 03:23:59 2020 +1000 + + Created discriminator with 3 Conv2D layers, LeakyReLUon each layer, eventually downsamples every layer to a scalar 1 number output with a Flatten-Dense layer combo.Should add some dropout layers upon creating the full DCGAN and tweak with it as may overfit. + +commit 8caf5a1743a485ec84aa829d77ddb9a2ba48e63e +Author: Paiwand Mohammad Karem +Date: Tue Nov 10 02:47:49 2020 +1000 + + Confirmed data processing is correct, displaying images correctly + +commit a62695198b90594fa89c7b4a19832512955a905a +Author: Paiwand Mohammad Karem +Date: Tue Nov 10 01:20:32 2020 +1000 + + Completed data preprocessing, will display images next commit to ensure it has been done correctly + +commit 41f93901b5531e39338b4d1deae82be203c2c9bf +Author: Paiwand Mohammad Karem +Date: Mon Nov 9 22:50:00 2020 +1000 + + Created datasets, shuffled them + +commit 1cfeacfd655710b8da0c2bfedf47645880256b06 +Author: Paiwand Mohammad Karem +Date: Mon Nov 9 22:49:08 2020 +1000 + + Set up data directories correctly + +commit 51922f47daa1ff63c9289da0da02e2c21eaa1867 +Author: Paiwand Mohammad Karem +Date: Mon Nov 9 21:58:20 2020 +1000 + + Setup directories and created file + +commit a7eb11b889ab84b74e716e325f185a22e86829f9 +Author: Dhilan Singh +Date: Sun Nov 8 23:43:31 2020 +1000 + + Reduced batch size down to 12 to prevent running out of memory during training + +commit bc16936a18175a07f1767e9ad0f3c71cc994b405 +Author: Antoine Le +Date: Sun Nov 8 23:40:24 2020 +1000 + + added more info in Readme.md + +commit 2e4d5436abfe41b0ea7a3827890ac74fa3b49f08 +Author: MajorRedux +Date: Mon Nov 9 00:32:59 2020 +1100 + + Update README.md + + Fixed the Gifs by compressing them and added some more details to the methodology. Filled out Justification of Training, Validation and Testing Split of Data. + +commit 555c14dd034c9708138fc497117a5a5252dde8aa +Author: MajorRedux +Date: Mon Nov 9 00:05:48 2020 +1100 + + Quick experiment using a highly optimised model with large batch sizes (256). Results are surprising and could use more research/experimentation. SSIM is not working as intended. + +commit 914c9e1cc1812d70b01b41900e2841bdef3807ee +Author: Dhilan Singh +Date: Sun Nov 8 22:37:10 2020 +1000 + + Fixed spelling error in README file + +commit 1f72138cb742560807040dff40d6e7e894584d27 +Author: Leo Orpilla III +Date: Sun Nov 8 22:33:36 2020 +1000 + + Move image preview to driver + +commit 1f6386042ba86e91538393842eb35794e27ffbc4 +Author: izzygpeters <72848958+izzygpeters@users.noreply.github.com> +Date: Sun Nov 8 12:57:04 2020 +1000 + + Removed TeX from readme as it doesn't render + +commit 1849a7f7699aa87918171cf80acc765806cc2771 +Author: izzygpeters <72848958+izzygpeters@users.noreply.github.com> +Date: Sun Nov 8 12:51:00 2020 +1000 + + Fixed readme to link to UNet not Improved UNet + +commit 1b44ac9866d2b17a852f36f6969925cc7d5fce23 +Author: izzygpeters <72848958+izzygpeters@users.noreply.github.com> +Date: Sun Nov 8 12:48:36 2020 +1000 + + Readme formatting issue fixed. + +commit d29f2f1ac808a2eb9c48f92432748e86b9201363 +Author: izzygpeters <72848958+izzygpeters@users.noreply.github.com> +Date: Sun Nov 8 12:47:17 2020 +1000 + + Small readme changes + +commit 09b58f57fa1db88202f07b13580e83624c2e5c0d +Author: izzygpeters <72848958+izzygpeters@users.noreply.github.com> +Date: Sun Nov 8 12:34:00 2020 +1000 + + Deleted small redundant comment in metrics + +commit ffd681432733066ff2b5dcf3852ed7e1d4ce0928 +Author: Dhilan Singh +Date: Sun Nov 8 07:31:54 2020 +1000 + + Fixed syntax error + +commit 25005a70bf0754d8d3c0c0ed9510a6a058f5b61d +Author: Dhilan Singh +Date: Sun Nov 8 07:17:36 2020 +1000 + + fixed file extension error in png images + +commit 9c359857392aedffe9d5946cfc808913e719d48b +Author: Dhilan Singh +Date: Sun Nov 8 06:47:41 2020 +1000 + + retured images to original size. Look in folder to see + +commit cf2793a81ecd5caae6d4b8537a7b3c5bab9ad370 +Author: Dhilan Singh +Date: Sun Nov 8 06:41:39 2020 +1000 + + trying to get image to show in readme + +commit 01d92cb01dadb208ed1f1d262b8d092c42dbad84 +Author: Dhilan Singh +Date: Sun Nov 8 06:37:28 2020 +1000 + + Scaled readme images + +commit 72279ba9896d717fea5c3e547b1234973c8d6690 +Author: Dhilan Singh +Date: Sun Nov 8 06:34:16 2020 +1000 + + changed reference back + +commit 953f7daa016eeef93be44cd2fb40833841c98afe +Author: Dhilan Singh +Date: Sun Nov 8 06:32:56 2020 +1000 + + edited image size + +commit d7a99e3a209a716de91240490e9383b57f0d875c +Author: Dhilan Singh +Date: Sun Nov 8 06:30:20 2020 +1000 + + One final edit, added Jupyter notebook version + +commit e330994d683f19ff103c08ec0812ade16b45157d +Author: tsalim +Date: Sun Nov 8 06:29:19 2020 +1000 + + Final-final commit, hopefully, broken image link fixed in readme + +commit 7a5756e50ac33bb81c8cc6ec3c8caee9300c4720 +Author: tsalim +Date: Sun Nov 8 06:27:04 2020 +1000 + + Final commit: readme.md completed with descriptions and results, all functionalities tested to be working and giving satisfactory results, plot function was accidentally deleted in previous commit, added back, minor errors corrected in other modules, more comments added to all modules. + +commit 95cf18f7d2ce275bb18a802be2e054f0d3c77f6b +Author: Dhilan Singh +Date: Sun Nov 8 06:26:52 2020 +1000 + + One final edit, added Jupyter notebook version + +commit 11f7a02570f9c8236ead493c28dcc619ee27db5b +Author: Dhilan Singh +Date: Sun Nov 8 06:22:47 2020 +1000 + + Added README documentation. Project finished. Ready for pull request. + +commit 2619aa925a5d9b0b3eae08b00c360d192a380f34 +Author: tsalim +Date: Sun Nov 8 05:23:01 2020 +1000 + + fixes wrong filter sizes in unet that caused errors; edited inconsistent names in main, removed unused codes, and changed batch sizes due to memory issues and changed Adam learning rate to get better results + +commit 92719d784584b795f8c4bb167ba1550b09b785f7 +Author: Dhilan Singh +Date: Sun Nov 8 03:55:58 2020 +1000 + + Adjusted plot to make more readable + +commit 0a7077b58eb5338b0f49cb08a3e5cabcd3207bc8 +Author: Dhilan Singh +Date: Sun Nov 8 03:53:46 2020 +1000 + + Added function to plot and save output predicition visualisations + +commit 2e6352def46d175029c602e10e0003698d19d46a +Author: Dhilan Singh +Date: Sun Nov 8 03:30:10 2020 +1000 + + Added evaluation and prediction on test set functionality. Nearly done + +commit df18f4cb024d30bd4583645f7ffd0c07ad837766 +Author: Dhilan Singh +Date: Sun Nov 8 03:03:48 2020 +1000 + + Added testing and general plotting functions for visualisation, in new module named visualisation + +commit 27fe39de2c2bbf33ee9b7e47ce53cab83e93a548 +Author: dannyt622 <69776083+dannyt622@users.noreply.github.com> +Date: Sun Nov 8 02:35:42 2020 +1000 + + Update README.md + +commit 87bbabe015828597eabea2702636f681ace6319b +Author: dannyt622 <69776083+dannyt622@users.noreply.github.com> +Date: Sun Nov 8 02:35:20 2020 +1000 + + Last final version of README + +commit 1ed8332f0078b1c9942878678ffe746b09b4347e +Author: dannyt622 <69776083+dannyt622@users.noreply.github.com> +Date: Sun Nov 8 02:31:58 2020 +1000 + + Final version of readme + +commit d74c20f9897acb7e0c87e0fb5f3cf5f5020078d9 +Author: Dhilan Singh +Date: Sun Nov 8 02:26:09 2020 +1000 + + Added model training functionality. Fixed error with datatypes by casting. Model successfully trained to >90 DSC after 3 epochs. + +commit 71ffdba0cc3397fb6613448bc02bb1484428b071 +Author: dannyt622 <69776083+dannyt622@users.noreply.github.com> +Date: Sun Nov 8 02:12:54 2020 +1000 + + Update README.md + +commit 2b71efc4a4310cd3f9928af54161c4172c336fda +Author: dannyt622 <69776083+dannyt622@users.noreply.github.com> +Date: Sun Nov 8 02:12:11 2020 +1000 + + Update README.md + +commit 0bc3baee7852532bc1f0665c0bdf30522af510f1 +Author: dannyt622 <69776083+dannyt622@users.noreply.github.com> +Date: Sun Nov 8 02:07:13 2020 +1000 + + Update README.md + +commit 581c7bc86ff71d168333d5b0d7f41098f07e4718 +Author: dannyt622 <69776083+dannyt622@users.noreply.github.com> +Date: Sun Nov 8 02:06:19 2020 +1000 + + Update README.md + +commit 4bd8d032f01cbbd6069c299f5432bed8c11b288e +Author: dannytong +Date: Sun Nov 8 02:05:19 2020 +1000 + + Added new readme + +commit 5bd64b37944d4f91a2a58df8ea87e3abb4fbc504 +Author: dannyt622 <69776083+dannyt622@users.noreply.github.com> +Date: Sun Nov 8 01:50:13 2020 +1000 + + updated module detail in readme + +commit 1c310b8a0b22ceaee11ca34f032633010904f53c +Author: tsalim +Date: Sun Nov 8 01:11:31 2020 +1000 + + main.py completed including model building, training and testing; fixes issues in other modules: delete redundant variables and fixes new folder structure in processdata and make it return data to use in main, also modified imagegen.py to return data and added function to generate test image batches for visualisation + +commit 32d89027b66be5b65bfcf6c4df4fd7970e8d0162 +Merge: e87445ec c9ae8503 +Author: dannytong +Date: Sun Nov 8 00:47:41 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/dannyt622/PatternFlow into topic-recognition + +commit c9ae85030661d36066e6d7e74f0051ecded9a253 +Author: dannyt622 <69776083+dannyt622@users.noreply.github.com> +Date: Sun Nov 8 00:47:21 2020 +1000 + + Added brunch of photo in readme + +commit e87445ecacbdc7e4b55d5a0375e6e15473d169c9 +Author: dannytong +Date: Sun Nov 8 00:46:09 2020 +1000 + + Added network architecture + +commit d8a803524faedac540c8cf5bafe909994de2e62b +Author: dannyt622 <69776083+dannyt622@users.noreply.github.com> +Date: Sun Nov 8 00:39:35 2020 +1000 + + Testing image in readme + +commit 8dbf164b84e01888cfac9c59a64de279ea2d37d0 +Author: dannyt622 <69776083+dannyt622@users.noreply.github.com> +Date: Sun Nov 8 00:39:00 2020 +1000 + + Added some line about algorithm and testing image + +commit ef97aef4c50190e79c016146421a303846b4f3b3 +Author: dannytong +Date: Sun Nov 8 00:33:01 2020 +1000 + + Change the model to leakyrelu + +commit 2f9dc9fdf3f39b379f3d5ad3c276e21960ea948c +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sun Nov 8 00:31:04 2020 +1000 + + Update README.md + +commit 9f2f4f2e3a4a08e3b8c2eda2ec9366ea1fe89fb6 +Author: dannytong +Date: Sun Nov 8 00:30:18 2020 +1000 + + Redign the model WIP finish the decode part + +commit d4175e17ff47d424136c91373d3a3f45c3da408f +Author: dannytong +Date: Sun Nov 8 00:29:49 2020 +1000 + + Redign the model WIP finsih the encode part + +commit 93ad624e9db03dbaf330f6d432b549ac7ee6db81 +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sun Nov 8 00:28:17 2020 +1000 + + Update README.md + +commit 9c746268deafaf6b2fa7c100692368f452e73f48 +Author: dannytong +Date: Sun Nov 8 00:27:41 2020 +1000 + + Redisgn the model + +commit 336fbbadbbc5de33b6b3dcca6f14ebdb75980156 +Author: dannytong +Date: Sun Nov 8 00:26:00 2020 +1000 + + Solve the low accuracy problem(wrong activation function) + +commit fb10ef53ed0ffa56ca80030afe86781fdd3f29e2 +Author: dannytong +Date: Sun Nov 8 00:23:06 2020 +1000 + + Added some comment in Script.py + +commit 3ef19814e9a44a03f26435cbb59179d5b396038c +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sun Nov 8 00:18:29 2020 +1000 + + Update README.md + +commit 2fd346c10cd2b52a953ce0de07de299ba64d0fdb +Author: dannytong +Date: Sun Nov 8 00:18:27 2020 +1000 + + Updataed Script.py fixed shape error + +commit 4fc4e8702d31f0c875778057a766ab753bb8074e +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sun Nov 8 00:16:28 2020 +1000 + + Update README.md + +commit dae42917b9a07014dae8006ccc9ce18ccb58cdaf +Author: dannytong +Date: Sun Nov 8 00:04:18 2020 +1000 + + Added model summary model + +commit 5d8c3f4f62c022a147332d65f26ee5438815d2ed +Author: dannytong +Date: Sat Nov 7 23:57:09 2020 +1000 + + Added image for Readme + +commit bd194c3944ddad2f23f78f6381ce928eb14c06be +Author: izzygpeters <72848958+izzygpeters@users.noreply.github.com> +Date: Sat Nov 7 23:56:12 2020 +1000 + + More readme formatting + +commit 960cc4d96ddc9452463eeadf18dbfe40ed707f89 +Author: izzygpeters <72848958+izzygpeters@users.noreply.github.com> +Date: Sat Nov 7 23:55:37 2020 +1000 + + Some small readme formatting + +commit 8276e91abc19240c95d1bdb42e7218874609c896 +Author: izzygpeters <72848958+izzygpeters@users.noreply.github.com> +Date: Sat Nov 7 23:54:40 2020 +1000 + + Spelling error in readme. + +commit d7d9e3387e7f815f595c1ba31324e55c473989ed +Author: Isabel Peters +Date: Sat Nov 7 23:51:52 2020 +1000 + + Reverted back to standard UNet. Time to pull request + +commit ddc56c2b070ba696c1a2d3506fb77f6a483f602c +Author: dannytong +Date: Sat Nov 7 23:48:12 2020 +1000 + + complete Q1 + +commit 86c373f9e51a66833bd2b45066dc56a1bffcbe07 +Author: MajorRedux +Date: Sun Nov 8 00:41:26 2020 +1100 + + Created README.md + + Couldn't Upload GIFs of results due to GitHub limitations. GDrive links have been provided. + +commit b85c13946aa05eb0465969eccada7912128442bc +Author: Wenjun Zhang +Date: Sat Nov 7 23:12:27 2020 +1000 + + Fixed documentation typo + +commit 05c00a663836bec6d3ed072939ba1a56f696af00 +Author: MajorRedux +Date: Sun Nov 8 00:07:07 2020 +1100 + + Delete image_03294.png + +commit c88206eb323cc3d4442b76126e68cffaa6bd61bf +Author: MajorRedux +Date: Sun Nov 8 00:07:00 2020 +1100 + + Delete image_01952.png + +commit 040e4cda150c7d81c68d2e7381e5d1046c88e5cc +Author: MajorRedux +Date: Sun Nov 8 00:06:53 2020 +1100 + + Delete image_00549.png + +commit 79ee3a09a7aebf1253f295492e30d02643703d27 +Author: MajorRedux +Date: Sun Nov 8 00:06:44 2020 +1100 + + Delete image_00000.png + +commit 7df104ec815b5e50734be4e240c4001491e95fba +Author: MajorRedux +Date: Sun Nov 8 00:06:36 2020 +1100 + + Delete desktop.ini + +commit 36fa34660267fd80e2ccccd289a63f7c8fddf0e7 +Author: MajorRedux +Date: Sun Nov 8 00:00:38 2020 +1100 + + Add files via upload + +commit 5ae9f41150d6c12ab4739833d63a1c8471efcd3b +Author: MajorRedux +Date: Sat Nov 7 23:57:41 2020 +1100 + + Delete testing_1_selu_nadam_heUniform + +commit cc4fae292541a8a9d703dbbb3460f099bdb3993e +Author: MajorRedux +Date: Sat Nov 7 23:57:32 2020 +1100 + + Delete image_03294.png + +commit 64faaf8730e60d8f8c2fb62ef86b1e99cc28e617 +Author: MajorRedux +Date: Sat Nov 7 23:57:25 2020 +1100 + + Delete image_02623.png + +commit 41d8507479a9efb7f2daed3ec5470799f325d475 +Author: MajorRedux +Date: Sat Nov 7 23:57:15 2020 +1100 + + Delete image_00732.png + +commit 1798bc531d7b799e8ff3c5974b7b87007dc32ee6 +Author: MajorRedux +Date: Sat Nov 7 23:57:06 2020 +1100 + + Delete image_00001.png + +commit 6776fe3acc85b3ae7d7f5b26d69e1b5d35c47005 +Author: MajorRedux +Date: Sat Nov 7 23:54:20 2020 +1100 + + Create testing_1_selu_nadam_heUniform + +commit 1a91c9bb90e283768e4d5e74eda13dbeb053d5bc +Author: MajorRedux +Date: Sat Nov 7 23:52:14 2020 +1100 + + report testing 1 + +commit 74f78c08ede04dc5cfbeb2b1e73bf87b3eeda00d +Author: Wenjun Zhang +Date: Sat Nov 7 22:30:07 2020 +1000 + + DOne: Comments on main function; Comments on model; + +commit 6b18a644d3a211df777675d5dc293c1dc15d46ed +Author: MajorRedux +Date: Sat Nov 7 23:27:05 2020 +1100 + + New block structure - Elu, Nadam, Batch 6, 1000 Epochs -> Interesting Results/Good + +commit 13082f1bd8d3e718b2a40a8c5350a841128de963 +Author: tsalim +Date: Sat Nov 7 22:25:51 2020 +1000 + + fixed some variables with wrong names in imagegen + +commit 38f5b155bd31ff9c37403389845ca9d2c1995be1 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 22:24:17 2020 +1000 + + Update README.md with examples and small fixes + +commit 322d77ad3a3dc22c27035844594a3d8e9c29a9b2 +Merge: 08c9a8b9 9a5893c5 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 22:20:41 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/matt-jones27/PatternFlow into topic-recognition + +commit 08c9a8b9791a2a8ab999806ec822bbaf03549e4e +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 22:20:37 2020 +1000 + + Added example output images + +commit f47e6fc77ec354da2199218804c540f10327526b +Author: tsalim +Date: Sat Nov 7 22:11:19 2020 +1000 + + added a module containing image generators to generate training data from input images + +commit 13e5aa2c110049c65051081e209a8e2abf29c460 +Author: Dhilan Singh +Date: Sat Nov 7 20:47:51 2020 +1000 + + Added Dice Similarity Coefficient loss functions in seperate metrics module + +commit 3bd0d1957d2e02f5838765eee53378eb474a090b +Author: tsalim +Date: Sat Nov 7 20:42:18 2020 +1000 + + add module containing methods to rearrange images to train, test, val; minor change to unet module + +commit 42c4a7846bffbd4be6d5b1d01a3aa56c51085a66 +Author: Isabel Peters +Date: Sat Nov 7 20:40:33 2020 +1000 + + Draft finished algorithm and documentation. Model still not training as fully intended + +commit 1a15b019bb5610c7fd31021d9af4e6bb50218c9b +Author: Claire1217 <68185308+Claire1217@users.noreply.github.com> +Date: Sat Nov 7 20:21:56 2020 +1000 + + Update README.md + + Added Data visualization, How It Works and Reference session + +commit 1eb4a11cba5f7eb59dcb01a7e176516083aad05b +Author: Wenjun Zhang +Date: Sat Nov 7 19:55:15 2020 +1000 + + Add dataset visulization image + +commit 025f3e41359f05baae17d342db5206e3ad403f68 +Author: Isabel Peters +Date: Sat Nov 7 19:28:58 2020 +1000 + + Readme documentation mostly done. Improved UNet model not training as intended yet + +commit 83b2982520ec73964623b286719d469fc011e0f5 +Author: Kelsey McGahan +Date: Sat Nov 7 19:20:24 2020 +1000 + + Fixed spelling and formatting errors in README + +commit e4277dfb8d7511efac6a4f1daa602a37e99f24c9 +Author: Kelsey McGahan +Date: Sat Nov 7 19:13:25 2020 +1000 + + Added sections to README, added another image to readmeImages + +commit f7707e9716f0dc383afbe6e1bc6fd13bac00e124 +Author: MajorRedux +Date: Sat Nov 7 19:36:07 2020 +1100 + + Elu, Nadam, Batch 6, 3000 Epochs -> surprising results + +commit 9a5893c57cf5c8fb12ae587c39f6c68fffdaf4aa +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 18:08:07 2020 +1000 + + Update README.md with usage and grammar + +commit c976a9e8cc7f9f2ec1407ce68b0e54621aa6504c +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 18:07:30 2020 +1000 + + Add test_output and update accuracy graph + +commit 8e9abcc41894953692afdcd2d1b738dbdc88cfce +Author: Leo Orpilla III +Date: Sat Nov 7 17:53:48 2020 +1000 + + Cleanup + +commit 1287a996bca9047c30e63a9f339de8dea781b4fb +Author: Leo Orpilla III +Date: Sat Nov 7 17:53:44 2020 +1000 + + Update README + +commit 5dd18ae240fe475c05414ac818dc4d1ee6eb198c +Author: Leo Orpilla III +Date: Sat Nov 7 17:53:33 2020 +1000 + + Add SLURM script + +commit 873e0c3d4c17b3ac2c2d8b1654894d0ae92c0bef +Author: Isabel Peters +Date: Sat Nov 7 17:43:41 2020 +1000 + + Commented image and metrics files. + +commit 4d1bb6529708c7a50e28d9dfc96a5ef9b8a21e75 +Author: Leo Orpilla III +Date: Sat Nov 7 17:26:47 2020 +1000 + + Remove tqdm + +commit a2eeca7c23a81009628fc506ee3c3ad3ec0f2d15 +Author: Leo Orpilla III +Date: Sat Nov 7 17:25:53 2020 +1000 + + Add README + +commit efd5a6fa8449b416700b98c1e7960b1818331d17 +Author: Dhilan Singh +Date: Sat Nov 7 17:20:06 2020 +1000 + + Moved all unet model creation functionality into a seperate module called model. Added more print statements. Code is now very clean. + +commit e96dfdea4e2da9e841176199a83e38acb63657c6 +Author: Kelsey McGahan +Date: Sat Nov 7 17:15:27 2020 +1000 + + Cleaning up files and comments for submission. + +commit eb1c82cc9a98df2e32a89dd696640b2db01377c7 +Author: Leo Orpilla III +Date: Sat Nov 7 17:14:58 2020 +1000 + + Add comments + +commit 29f5e47de36c5da0ae6f1b7447f91700f51123e0 +Author: Leo Orpilla III +Date: Sat Nov 7 17:14:49 2020 +1000 + + Rename driver + +commit 5e9a34e2209c255e65d8cb6bc4895337fcf3b7eb +Author: Isabel Peters +Date: Sat Nov 7 17:08:14 2020 +1000 + + Improved UNet model now builds. Still have not had access to gpu to train. + +commit d53270b05eae77bca4ad7de77f4e29bf43bb29e2 +Author: Dhilan Singh +Date: Sat Nov 7 17:02:23 2020 +1000 + + Added function that builds the improved unet model. Seems to be working. + +commit dca6fbe27e017786d68c1a3d0d1c7491f8f66959 +Author: Yuris Cakranegara +Date: Sat Nov 7 16:45:46 2020 +1000 + + Update README.md + +commit 24d7698d9dbad2efa752150cbad70c3568e8c118 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 16:45:33 2020 +1000 + + Create test_driver.py test script + +commit 3307c39745bb098eb0e3410c4875fa4933310221 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 16:45:20 2020 +1000 + + Code documentation and restructuring + +commit 8418fab16eaf4bce1100c7c135d9caf7f5a47025 +Author: PeterDinhNgo <59048760+PeterDinhNgo@users.noreply.github.com> +Date: Sat Nov 7 16:38:21 2020 +1000 + + Update header-block + +commit 66ca5eb50d88a54e25729114e6a07ca0c3edf218 +Author: PeterDinhNgo <59048760+PeterDinhNgo@users.noreply.github.com> +Date: Sat Nov 7 16:37:45 2020 +1000 + + Date to header + +commit 0a8fe21543b22bc8be6482a8b56b9b3b8ba05282 +Author: PeterDinhNgo <59048760+PeterDinhNgo@users.noreply.github.com> +Date: Sat Nov 7 16:37:21 2020 +1000 + + Added date to header-block + +commit 344998611174a13488406ba2c8acc33e58071721 +Author: Yuris Cakranegara +Date: Sat Nov 7 16:35:51 2020 +1000 + + Update README.md + +commit 4e4f687c511007ca87bf6dc41b1b7a21e201f105 +Author: Yuris Cakranegara +Date: Sat Nov 7 16:32:30 2020 +1000 + + edited resources for readme + +commit 36fa03740d32c1068c89e4c78b0dd7a15c195469 +Author: A-Bayusuto <31500417+A-Bayusuto@users.noreply.github.com> +Date: Sat Nov 7 16:31:03 2020 +1000 + + Update README.md + +commit acaaa43d17b5fb60741215514970eb08735b0bde +Author: PeterDinhNgo <59048760+PeterDinhNgo@users.noreply.github.com> +Date: Sat Nov 7 16:19:45 2020 +1000 + + Delete readme.md + +commit 77a55e97fa45078bb18d538bcd9ea342dcec283d +Author: PeterDinhNgo <59048760+PeterDinhNgo@users.noreply.github.com> +Date: Sat Nov 7 16:19:38 2020 +1000 + + Delete main.py + +commit 56a092f292ec997b7dd1f1b7cf12a62599238161 +Author: PeterDinhNgo <59048760+PeterDinhNgo@users.noreply.github.com> +Date: Sat Nov 7 16:19:31 2020 +1000 + + Delete dcgan.py + +commit 339a5736ab8f6f0974bc305bbda183c224ae7df5 +Author: PeterDinhNgo <59048760+PeterDinhNgo@users.noreply.github.com> +Date: Sat Nov 7 16:19:22 2020 +1000 + + Delete DCGAN.ipynb + +commit 8c867b3d13d44d8ed327c3f2713b636e8f207e61 +Author: PeterDinhNgo <59048760+PeterDinhNgo@users.noreply.github.com> +Date: Sat Nov 7 16:19:11 2020 +1000 + + Delete layers.py + +commit fa06c305f007f11db7aa26f2fcc80fe3ff0d9750 +Author: jaydonhansen <49255230+jaydonhansen@users.noreply.github.com> +Date: Sat Nov 7 16:18:07 2020 +1000 + + Updated broken link in Readme + +commit 23c29caae7e0400b38794e8e6292e3ccb602538b +Author: jaydonhansen <49255230+jaydonhansen@users.noreply.github.com> +Date: Sat Nov 7 16:16:24 2020 +1000 + + Updated dependency versions + +commit 3dcc077c1c59ed2e7d2ca355848ea212d217b698 +Author: Yuris Cakranegara +Date: Sat Nov 7 16:16:14 2020 +1000 + + edited main.py to remove warning + +commit ea01cf52098ed1e35d070c7f21f1dd19b133a6b2 +Author: PeterDinhNgo +Date: Sat Nov 7 16:13:44 2020 +1000 + + readme formatting + +commit 7319a48d462bd954aa4ae9b07c85e72b0dd6c60d +Author: jaydonhansen <49255230+jaydonhansen@users.noreply.github.com> +Date: Sat Nov 7 16:08:56 2020 +1000 + + Added Readme.md and supplementary images, added file headers + +commit 29363512a5e01e26ac60fcdbfa7b260453428055 +Author: Yuris Cakranegara +Date: Sat Nov 7 16:08:31 2020 +1000 + + edited readme + +commit 5c8a65c07e705c42e04f7cd64becf36247ec6f82 +Author: PeterDinhNgo +Date: Sat Nov 7 16:08:01 2020 +1000 + + completed readme, removed module folder and added comments + +commit e15ec250b14e437eecfce834b495065e25e33056 +Author: Leo Orpilla III +Date: Sat Nov 7 16:05:37 2020 +1000 + + Update default config + +commit 8cffb9d913b004c45a2fa524912ac7c47ce1bec2 +Author: Leo Orpilla III +Date: Sat Nov 7 16:05:22 2020 +1000 + + Remove tqdm from model + +commit 4f1e1a83595c70302a7dcf1106a8f0aa05ee9fe0 +Author: Leo Orpilla III +Date: Sat Nov 7 16:05:05 2020 +1000 + + Update .gitignore + +commit 3ddbc3bcb50a86296de4717a8eece0ce7998dc07 +Author: Leo Orpilla III +Date: Sat Nov 7 16:04:52 2020 +1000 + + Add Pipfile + +commit f8ac5e5c8028aec8d99d1206152e3bfe9b91b5be +Author: Leo Orpilla III +Date: Sat Nov 7 16:04:37 2020 +1000 + + Add comments + +commit cc8c146f616f26e44ab395758834ef6d1acbf252 +Author: Yuris Cakranegara +Date: Sat Nov 7 15:55:30 2020 +1000 + + edited epochs + +commit 3f69fc8659d76f1dd78a93fd72ca12b9c1aff37e +Author: Yuris Cakranegara +Date: Sat Nov 7 15:55:10 2020 +1000 + + edited readme + +commit 3c5555772834b40d7cd66b26207db27faa46ff78 +Author: Yuris Cakranegara +Date: Sat Nov 7 15:49:13 2020 +1000 + + added readme + +commit 50caaab0ca3f9d51e39500d491323c4b6ddb3155 +Author: Md Abdul Bari +Date: Sat Nov 7 15:30:19 2020 +1000 + + couple of inline comments were added for better readability + +commit d346a45ebf1f6ece854bcc9190b906d641bef6b5 +Author: Md Abdul Bari +Date: Sat Nov 7 15:29:19 2020 +1000 + + couple of inline comments were added for more clarity + +commit 740b47e7f9f1a76266feb113db62e8076e1525db +Author: Yuris Cakranegara +Date: Sat Nov 7 15:16:06 2020 +1000 + + added more script logging and changed SSIM calculation to get the maximum + +commit 1034fcf1b654dff7968d263c4759fe3669e4feaa +Author: tsalim +Date: Sat Nov 7 15:10:56 2020 +1000 + + added 2 modules containing functions to create UNET model and calculating dice coefficient and loss + +commit 17c3f481ca0b322b9bdf683780a200cc73d0280e +Author: Kelsey McGahan +Date: Sat Nov 7 15:06:21 2020 +1000 + + Tried to convert the .ipynb files to .py files. + Didn't work too well, going to revert back to .ipynb files. + +commit 2024447278929fcc1c6d4619bdfbb609409f101e +Author: Yuris Cakranegara +Date: Sat Nov 7 15:00:20 2020 +1000 + + added logging to model script + +commit 9c652502e10927f15580d8371f8c71df0c90f2f2 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 14:55:25 2020 +1000 + + Update README.md with results + +commit 635b53c71c862f6d5ed3dcac8bf6aa4c097e0b2f +Merge: 7dc7c78d 17ea6286 +Author: Matthew Jones +Date: Sat Nov 7 14:42:43 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/matt-jones27/PatternFlow into topic-recognition + +commit 7dc7c78db7431200e1d836dcb90a90d67389172c +Author: Matthew Jones +Date: Sat Nov 7 14:38:09 2020 +1000 + + Allow for GPU memory growth + +commit b8ba0e60d8209f6efa53a71ae5abf3ec05dfd704 +Author: Matthew Jones +Date: Sat Nov 7 14:36:24 2020 +1000 + + Add GPU memory growth and small fixes + +commit 17ea62860b05ff3a0dafe6b4635ecc77ad221697 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 14:29:22 2020 +1000 + + Add model_structure.py for README.md + +commit 799c9aa9e79f93f86d77978b22d70aa0d8722565 +Author: Md Abdul Bari +Date: Sat Nov 7 14:28:13 2020 +1000 + + extensive documentation and in-line comments were added to prevouscodes for better understandability + +commit 493c4fe01c4c6f555f5c02b9dd819e819dd2be91 +Author: reecesomethingjay <43804494+reecesomethingjay@users.noreply.github.com> +Date: Sat Nov 7 14:27:57 2020 +1000 + + Updated README.md to better meet criteria + +commit 9ac3bdb7b6b596a7a34bb0fa5bfda18b55ecc4e9 +Author: jaydonhansen <49255230+jaydonhansen@users.noreply.github.com> +Date: Sat Nov 7 14:21:30 2020 +1000 + + General code cleanup + + Formatted several messy sections and changed ambiguous variable names, improved comments + +commit 160c198c0bc849823253b3dacd73084555a8a43b +Merge: 0dde9185 c988309b +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 14:10:53 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/matt-jones27/PatternFlow into topic-recognition + +commit 0dde91854123183826c3efa390c0ff7ecff7e3f9 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 14:10:46 2020 +1000 + + Improved IUNet model structure + +commit c988309b162b6aa7915294d6f35b54fa53b87d43 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 14:01:22 2020 +1000 + + Update README.md with methodology + +commit a4cb9c1a4fe1c49998554fecec4aa75198b4553e +Author: yorkequ98 +Date: Sat Nov 7 11:44:04 2020 +0800 + + added more comments + +commit bf38db16385d7a8ab8f74114530318a134051ef8 +Author: yorkequ98 +Date: Sat Nov 7 11:29:21 2020 +0800 + + Fixed some bugs + +commit c34ba948688fe5ea8e7685278390be6c5a99e673 +Author: Leo Orpilla III +Date: Sat Nov 7 13:25:57 2020 +1000 + + Modify model for 128x128 input + +commit 4bfac6e68246f8ce44a2bc91ab68779332170138 +Author: dannytong +Date: Sat Nov 7 13:17:26 2020 +1000 + + added encoding layer + +commit 379e64a1455392f0531540a9ac16c26d49a7e531 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 13:07:19 2020 +1000 + + Images for README.md + +commit 97bc027b507bbe59a1e0c99876c7140b0c0fd7a5 +Merge: b725f284 f5bd63b0 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 13:03:31 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/matt-jones27/PatternFlow into topic-recognition + +commit b725f28469860a07fb7813ab825218c2d4bac6c8 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 13:03:15 2020 +1000 + + Migrate data preprocessing to IUNet_sequence.py + +commit 20d8f8d8a389f5e7dd99392fe7f099ab2dbd888f +Author: George Mulhearn +Date: Sat Nov 7 13:02:32 2020 +1000 + + :memo: readme final touches and driver usage simplified + +commit f7a56b682f87907fd5c0ca60b886e71196a3bdc8 +Author: Isabel Peters +Date: Sat Nov 7 12:58:07 2020 +1000 + + Tidied code. Moved metrics into new file. Implemented Improved UNet model but have not attempted training. + +commit f5bd63b0a3de25cb0aea9869703a9824b6492df8 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sat Nov 7 12:57:13 2020 +1000 + + Update README.md with dependencies and data split + +commit 9b3292802bd2ee2cc98a4532821ebf79beda05e2 +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sat Nov 7 12:56:52 2020 +1000 + + Update README.md + +commit cb76e10e2322f8647a094692f4bea84069c30e5b +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sat Nov 7 12:47:24 2020 +1000 + + Update README.md + +commit f09c6829ea821692f59850521b4b780edec9bd05 +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sat Nov 7 12:46:01 2020 +1000 + + Update README.md + +commit 433bdda77bd786ba270145960f8fef0984edf7cd +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sat Nov 7 12:43:06 2020 +1000 + + Update README.md + +commit ebad6f57eec130ff1f228f86f7811d7b9e48ce9b +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sat Nov 7 12:42:42 2020 +1000 + + Update README.md + +commit a04b0dca62bfb7f79350dd6b68f1f12c1dd2a5c9 +Author: Dhilan Singh +Date: Sat Nov 7 12:42:02 2020 +1000 + + added functions creating upsampling and localization modules + +commit 11fd216f9a28d546785cf035ba6dd65f65229891 +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sat Nov 7 12:41:02 2020 +1000 + + Update README.md + +commit 0c09573fa0b5181f4cbab6da6aa1534bdbe01979 +Author: ArunHarish +Date: Sat Nov 7 12:39:59 2020 +1000 + + Added README.md complete and dependent files and images. + +commit a548135e43a7033b6d6a4953baa9d496a71515cc +Author: George Mulhearn +Date: Sat Nov 7 12:37:28 2020 +1000 + + :memo: readme results finished + +commit 8def276425bafb16f595da9a5c8a466aade7c649 +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sat Nov 7 12:34:35 2020 +1000 + + Update README.md + +commit 271df812b146afbe2710971f2036376a078e6e68 +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sat Nov 7 12:32:29 2020 +1000 + + Update README.md + +commit 979a10ba8891f116eb36700164d90d9c11f4b39e +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sat Nov 7 12:32:15 2020 +1000 + + Update README.md + +commit 20121f189206090698b99904c8e469616e8bf9ca +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sat Nov 7 12:31:08 2020 +1000 + + Update README.md + +commit 44d832b98e7df82ca4b89270e18d2bd6eae6c193 +Author: sambethune <61214679+sambethune@users.noreply.github.com> +Date: Sat Nov 7 12:15:36 2020 +1000 + + experiment with markdown + +commit d2cccdb7cb9b358e53fc10dc748f36514254bb7a +Author: Samuel Bethune +Date: Sat Nov 7 12:11:49 2020 +1000 + + further tidied .ipynb + +commit 04bd04e36ac7cff373a717ef54360cf0a1f429c6 +Author: dannytong +Date: Sat Nov 7 12:06:59 2020 +1000 + + Testing + +commit a5ba4319a094e1778fcebf3bbc25b6a3295a1952 +Author: dannytong +Date: Sat Nov 7 12:02:02 2020 +1000 + + Change it to model and drive script + +commit a32e8f7a7e4084bf47dc0cee66f8693bb721dbf3 +Author: Tristan Samson +Date: Sat Nov 7 11:53:45 2020 +1000 + + Structure model.py to be an encapsulating class. + + - Moved all data loading/pre-processing to driver.py script + - Updated README.md to have correct usage instructions + - Added some comments + +commit 7ed5225cb9fcf703e00d5ea0f98d4dac204cc51e +Author: dannytong +Date: Sat Nov 7 11:50:54 2020 +1000 + + Testing + +commit 2b75d85edb03c08da569b55fa73d2c474bf882ba +Author: Samuel Bethune +Date: Sat Nov 7 11:48:23 2020 +1000 + + tidied driver.py, added new picture + +commit fb20eac8b0c1f1c47f22aea95a1692fd2582a24b +Author: dannytong +Date: Sat Nov 7 11:46:24 2020 +1000 + + Commit testing + +commit e7d20c67711fb0886b16108eb4c7f08e3e57fcaa +Author: Samuel Bethune +Date: Sat Nov 7 11:43:09 2020 +1000 + + created driver script with dependencies + +commit 8e4cc80a66d0aff01b03b8ee771d2940dc0dd69f +Author: Tristan Samson +Date: Sat Nov 7 10:57:28 2020 +1000 + + Gave up, using image instead of latex generator + +commit 97e5d6899ff6c17212da37fa444cfec6d066da9f +Author: Tristan Samson +Date: Sat Nov 7 10:51:26 2020 +1000 + + Try fix equation again + +commit e277c5552754283178d7d396a9a47f7ba1088505 +Author: Tristan Samson +Date: Sat Nov 7 10:50:14 2020 +1000 + + Added dependencies to readme, tried to fix loss fcn + +commit a2858038a38ecbf2372402006119c3ed9a6bf5d0 +Author: Tristan Samson +Date: Sat Nov 7 10:41:41 2020 +1000 + + Finish algorithm description + +commit e7a75d134a5eee8acacc6b3a2338c4a6d49f4697 +Author: Samuel Bethune +Date: Sat Nov 7 10:32:52 2020 +1000 + + returned to OASIS task, cleaned up notebook and added images + +commit c036389ceaacf9dcc7a763952393e873dafb7dc1 +Author: salim45018332 <74079837+salim45018332@users.noreply.github.com> +Date: Sat Nov 7 10:21:13 2020 +1000 + + Create README.md + +commit 18eedf093f6bf8eca20ea0fb31f4ee339b9e323c +Author: Kelsey McGahan +Date: Sat Nov 7 09:48:28 2020 +1000 + + Converted .ipynb to .py files, slightly altered file names to have underscores instead of dashes. Removed redundant code in Driver_Script and Classify model. Removed a lot of comments in both files. + +commit 31b585375d5b51cf4a11e9696561d475ededf9eb +Author: ArunHarish +Date: Sat Nov 7 09:09:07 2020 +1000 + + Done commenting trainer.py + +commit f2a7822adac6f8f44e572f49e21035d6b657229c +Author: Wenjun Zhang +Date: Sat Nov 7 09:00:00 2020 +1000 + + add comments + +commit a979ea93b08de614ea9b9cd36f87946ac320bf81 +Author: Claire1217 <68185308+Claire1217@users.noreply.github.com> +Date: Sat Nov 7 08:53:55 2020 +1000 + + Update README.md + + Add validation justification + +commit 7f299e43b894812a72f9a6d9d3991ddc83e41fc1 +Author: Samuel Bethune +Date: Sat Nov 7 08:28:13 2020 +1000 + + issues identified with data generator, steps taken toward resolution + +commit 85704922a513c95e0426835927d35f3ebe40bbd5 +Merge: d74b2381 60d071ed +Author: Wenjun Zhang +Date: Sat Nov 7 08:00:28 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/Claire1217/PatternFlow into topic-recognition + +commit d74b238148d01fbc70c55d5f1b5bb2c8091f335e +Author: Wenjun Zhang +Date: Sat Nov 7 07:59:42 2020 +1000 + + Done: Rearrange function and methods; Load model from ImprovedUnet.py. Need: Add more comments + +commit 60d071ed5b6273fef34a92e89640d0e8814e352d +Author: Claire1217 <68185308+Claire1217@users.noreply.github.com> +Date: Sat Nov 7 07:55:00 2020 +1000 + + Delete model.ipynb + + File name changes to script + +commit f1d2ac0cddc196468c8760d39be6314aebc4f546 +Author: Claire1217 <68185308+Claire1217@users.noreply.github.com> +Date: Sat Nov 7 07:51:51 2020 +1000 + + Update README.md + + Added dsc for test data. Final update + +commit 1ac92b0478723edf0e74354e326ccbfbb0685894 +Author: Wenjun Zhang +Date: Sat Nov 7 07:43:12 2020 +1000 + + add test dsc screen shot + +commit 1ed73c28e4ce529b516434ef2fd5b56f76d36d22 +Author: Claire1217 <68185308+Claire1217@users.noreply.github.com> +Date: Sat Nov 7 07:38:48 2020 +1000 + + Update README.md + + Fixed images + +commit 30d73a149774968fc0e9cb1b5c303765a004e6b6 +Merge: dfff7e56 2aeddc99 +Author: Wenjun Zhang +Date: Sat Nov 7 07:30:57 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/Claire1217/PatternFlow into topic-recognition + +commit 2aeddc995045a05ff65bb75f98411e89046f00ff +Author: Claire1217 <68185308+Claire1217@users.noreply.github.com> +Date: Sat Nov 7 07:30:17 2020 +1000 + + Update README.md + + Try fix images + +commit dfff7e56bb62a0ec547bebaaf5b412ecfdaf13d0 +Author: Wenjun Zhang +Date: Sat Nov 7 07:24:20 2020 +1000 + + modified images + +commit d86fea5b5df35ac12ce87177f9fe16883c29d7bd +Author: Claire1217 <68185308+Claire1217@users.noreply.github.com> +Date: Sat Nov 7 07:17:33 2020 +1000 + + Update README.md + + try fixed images + +commit 574f067fe2456d5e909a7dada9106a249c4a9386 +Author: Kelsey McGahan +Date: Sat Nov 7 07:14:58 2020 +1000 + + Transferred data import and preprocessing from the Model file to the Driver-Script file + +commit c2ae8645d883047774f1c565c0459ee759458ba7 +Author: Claire1217 <68185308+Claire1217@users.noreply.github.com> +Date: Sat Nov 7 07:11:26 2020 +1000 + + Update README.md + +commit da50addc439bc1d7b28e80000f6eed24e3e4d891 +Author: Wenjun Zhang +Date: Sat Nov 7 07:10:32 2020 +1000 + + image files + +commit 2538c26e598ee26e5ce3ed3fa4da343cfdf6f55d +Author: Bigturtlefly <69615599+Bigturtlefly@users.noreply.github.com> +Date: Sat Nov 7 06:07:36 2020 +1000 + + Final submit and the explanation of my commite log + + I am sorry that I did not understand where should I commit my work. So I creat a project in my own space and commit my work on there. But when I do the pull-request I found my mistake. So I screenshot my commit logs which are 'commits1.png' and 'commits1.png' from my project . + +commit dcb78bdb0cbc19761a91d0b5be0dd90aa456b648 +Author: Bigturtlefly <69615599+Bigturtlefly@users.noreply.github.com> +Date: Sat Nov 7 05:50:23 2020 +1000 + + Create * + +commit 97cb6bd4e7249943b061d5082cfbe73f43ebe284 +Merge: 549f568d 48b6c9a9 +Author: Wenjun Zhang +Date: Sat Nov 7 03:58:53 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/Claire1217/PatternFlow into topic-recognition + +commit 325dab9ec5a86f6cc71142ba9bb3ef1af672f978 +Merge: 9559357a 6408b1fc +Author: Declan Healey +Date: Sat Nov 7 03:57:12 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/dhealey95/PatternFlow-Private into topic-recognition + +commit 549f568d77e963ac1a243b036a913e823c7fc19a +Author: Wenjun Zhang +Date: Sat Nov 7 03:56:00 2020 +1000 + + Done: Change from tensorflow dataset to generator; Fixed model; Added visulization; dice to 0.78 with 200 iterations. Need: load model from model.py; group codes into main; try improve dice to 0.8 + +commit 9559357a669344f3988444434c8863554a60a9ba +Author: Declan Healey +Date: Sat Nov 7 03:55:59 2020 +1000 + + Code cleanup and bug fixes. + +commit 6408b1fc5f6db018df3236f6c045b0ab45eb32ff +Author: Declan Healey +Date: Fri Nov 6 17:37:32 2020 +0000 + + Completed README.md. + +commit 1d06644c24bf48f0486f85a31f54bb4d4628abd2 +Author: Antoine Le +Date: Sat Nov 7 03:24:11 2020 +1000 + + added comments + +commit 7aa89c4165af79e6b20cff883c845d4f0b81846a +Author: Dhilan Singh +Date: Sat Nov 7 03:19:06 2020 +1000 + + Added functions that create custom conv2d layers and contect module for improved unet + +commit 1df92267d097e0cb855fee6739cfa5a6f113b0e3 +Author: Antoine Le +Date: Sat Nov 7 03:13:58 2020 +1000 + + readme changes and unet changes + +commit e03b725380e8ff1de0a5cfeececf369e83a13c0c +Author: ArunHarish +Date: Sat Nov 7 02:35:37 2020 +1000 + + Commented data_loader, generator_loader and some trainer.py + +commit e0cb4d13af27df9790d5b96b59c42bd6de96560f +Author: Antoine Le +Date: Sat Nov 7 02:20:48 2020 +1000 + + added resources plots and images + +commit ba6de979bde1892a598b9e6d90fcd8f68f1bcafa +Author: Isabel Peters +Date: Sat Nov 7 02:19:32 2020 +1000 + + Changed loss function from DSC to crossentropy. Model now produces some results + +commit c1931b95c3ee988ee1b7884311427a7f187b72d1 +Author: Antoine Le +Date: Sat Nov 7 02:17:24 2020 +1000 + + readme and new method added and resources folder created + +commit 65fad7b5776ff1f7edf29a09ba7f826cd5d0b5f6 +Author: ArunHarish +Date: Sat Nov 7 02:14:03 2020 +1000 + + Added some commenting and README.md + +commit 893e86e9b29e9a75f05b96016216f0d771941c8f +Author: Pragatheeswari-dev <65264601+Pragatheeswari-dev@users.noreply.github.com> +Date: Sat Nov 7 02:11:42 2020 +1000 + + Finalised README.md + +commit b9d49099682fb01a2d4803e281f3c3fef5d3da29 +Author: yorkequ98 +Date: Sat Nov 7 00:11:41 2020 +0800 + + grouped the images into a folder. + +commit ba3a787ce8c039349d7181e7a782aac22d36f715 +Author: Dhilan Singh +Date: Sat Nov 7 02:11:12 2020 +1000 + + Created preprocess module and dataset preprocessing functionality. + +commit 4487717e0674b6ab878b246471c94225eee22a79 +Author: Pragatheeswari Velraj +Date: Sat Nov 7 02:06:06 2020 +1000 + + Updated Training loss plot and generated images results. + +commit 23688e616c6bf69b5be7c06dc02711fe3b14e624 +Merge: d510fe68 3fd2afc0 +Author: Pragatheeswari Velraj +Date: Sat Nov 7 02:00:42 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/Pragatheeswari-dev/PatternFlow into topic-recognition + +commit 2f0c1fb6b2bb455f67152a65f8503b8f0c8681ce +Author: Antoine Le +Date: Sat Nov 7 01:58:21 2020 +1000 + + overall changes to unet, dice and predictions + +commit d510fe68dd204b8e3b392556ef4c049d099ccbb7 +Author: Pragatheeswari Velraj +Date: Sat Nov 7 01:56:58 2020 +1000 + + Added Comments and finalised. + +commit ecdba4b17ac2a93d62beb967c2b5928cbe7e6dc3 +Author: yorkequ98 +Date: Fri Nov 6 23:56:16 2020 +0800 + + fixed a bug. + +commit 3fd2afc07d4d793b3d042ad5eed9ca6e6a797bb9 +Author: Pragatheeswari-dev <65264601+Pragatheeswari-dev@users.noreply.github.com> +Date: Sat Nov 7 01:50:21 2020 +1000 + + Updated README.md file with the additional plots. + +commit 0657d7cb49bfbffd7aaa3c84bf9e3ba098a6ef82 +Author: Isabel Peters +Date: Sat Nov 7 01:49:05 2020 +1000 + + Model working but only producing okay results under rare circum stances + +commit ddf82a3ee847db8018a10dffe30d2217fdc20063 +Author: Antoine Le +Date: Sat Nov 7 01:46:53 2020 +1000 + + progression on the readME, description done + +commit 8b7a274bee599eeee5f97174abc5d7eff5ceaea1 +Author: Vincentius Aditya Sundjaja +Date: Sat Nov 7 01:10:43 2020 +1000 + + updated split ratio in driver.py + +commit 7050edd23ae8aba8c94caa11850f90246705ecc1 +Author: Antoine Le +Date: Sat Nov 7 00:56:43 2020 +1000 + + creating README.md file + +commit e6991c02e6d9d7a50f6e85651f0d5787f0a40c11 +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Sat Nov 7 00:54:26 2020 +1000 + + Update readme.md + +commit be083ce289c6eb9cf7ff49b3ddd5382e58247f83 +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Sat Nov 7 00:42:01 2020 +1000 + + add the commit for code + +commit b2a145910cca735a2ab9b5f5c100cf8a903d5984 +Author: Reece Jocumsen +Date: Sat Nov 7 00:40:30 2020 +1000 + + Slight tweaks of dcgan.py and driver.py, removed main.py and wrote README.md + +commit 412b9a2c8d621848606657672167f0623ceda797 +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Sat Nov 7 00:35:36 2020 +1000 + + improve the structure of the main file + +commit 764e36c9177ed99c96b2bd87ddee88bc4b1cbdf3 +Author: Declan Healey +Date: Fri Nov 6 14:34:57 2020 +0000 + + Code refactor, clean-up and commenting. + +commit e66624cb73fb68788bd4a02e6acbed09c3b3d2d3 +Author: Dhilan Singh +Date: Sat Nov 7 00:33:36 2020 +1000 + + Added OASIS Brain Dataset load functionality. + +commit 35d245a3b21a5f632dc572fa3efd51bc6e37c09b +Author: ArunHarish +Date: Sat Nov 7 00:20:20 2020 +1000 + + Just added a float point just in case to data_loader normalising. Converted to normal random dist. Added final epoch image to be saved. + +commit 48b6c9a96fe01b4dca8290177df8acc782c09c5b +Author: Claire1217 <68185308+Claire1217@users.noreply.github.com> +Date: Sat Nov 7 00:03:47 2020 +1000 + + Create README.md + + README model file + +commit c5cc78bbc76a4b9fd77513f591e909f45d024281 +Merge: 3c902ce5 5b95c6bf +Author: Vincentius Aditya Sundjaja +Date: Fri Nov 6 23:58:49 2020 +1000 + + Merge remote-tracking branch 'upstream/topic-recognition' into topic-recognition + merging with the fork before commiting a pull request + +commit 914b2c5a71c3d7aeb88dce78626c0abee4af6038 +Author: yorkequ98 +Date: Fri Nov 6 21:56:45 2020 +0800 + + Updated the network architecture image + +commit 3c902ce51f2c18549d5f94c48263ded51dc7962b +Author: vincentiusadityas +Date: Fri Nov 6 23:55:44 2020 +1000 + + Update README.md + +commit 29f79569cee5dd21f9c07a81a0cca32bf3e5552b +Author: yorkequ98 +Date: Fri Nov 6 21:54:17 2020 +0800 + + Updated README and the image of network architecture + +commit 362ff83f5c6e85b9a74956c628655b0f52c26ede +Author: ArunHarish +Date: Fri Nov 6 23:48:27 2020 +1000 + + Detailed the exception message. + +commit 91877bbf45e4a83e455083910c0a19f6272d4954 +Author: Vincentius Aditya Sundjaja +Date: Fri Nov 6 23:46:09 2020 +1000 + + Updated README.md, updated driver.py to draw plots for metrics, and updated code documentation + +commit 5def39ab45e727c9e61bceea1ebb2f364d5a7e4d +Author: ArunHarish +Date: Fri Nov 6 23:44:45 2020 +1000 + + Made sure generator loader is only used when necessary. + +commit 0bd020268045197baa56d72422f2f3177c4e723f +Author: Christopher Bailey +Date: Fri Nov 6 23:28:49 2020 +1000 + + Write documentation + +commit 27c9ee49ea252c195a8138511dccb44b10580b86 +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Fri Nov 6 23:23:25 2020 +1000 + + Update readme.md + +commit 4925caa145cd255f253ba575b054649ec687d2fe +Author: ArunHarish +Date: Fri Nov 6 23:22:19 2020 +1000 + + Added driver script and its dependencies to load, train and generate image. + +commit 32bc7833cc06850fcb86e75f26ad0cdc7c7e280f +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Fri Nov 6 23:21:11 2020 +1000 + + upload readme,md + +commit 7845c68b4fa28f54174ce881511e6374d57d7a9c +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Fri Nov 6 23:19:22 2020 +1000 + + upload pic of output + +commit 20dadbe08c244b9d32e6783f19ba8cd125f9d036 +Author: Samuel Bethune +Date: Fri Nov 6 23:15:19 2020 +1000 + + re-encoded .yml in UTF8 + +commit 4a9ca5b5552ab712d50e889c7e2a55ffcd5c0480 +Author: jaydonhansen <49255230+jaydonhansen@users.noreply.github.com> +Date: Fri Nov 6 22:56:53 2020 +1000 + + Tweaked hyperparameters and trained model + +commit e2724db78f4c8613af21ff819cb503c03343946d +Author: A-Bayusuto <31500417+A-Bayusuto@users.noreply.github.com> +Date: Fri Nov 6 22:33:51 2020 +1000 + + Update README.md + +commit 65964d22e8d8339eb8f207a6309d65fd7b229665 +Author: Tristan Samson +Date: Fri Nov 6 22:29:28 2020 +1000 + + README progress - commit before bed. + +commit d0895c514d0ca35a4a6af7a66c2830e27efa740a +Author: jaydonhansen <49255230+jaydonhansen@users.noreply.github.com> +Date: Fri Nov 6 22:27:57 2020 +1000 + + Removed non-flattened dice coefficient + +commit a69c0feaac102b129fe5a02c7305e45017127cf9 +Author: Leo Orpilla III +Date: Fri Nov 6 22:25:20 2020 +1000 + + Add .gitignore + +commit 7072fc4447e40ccd57f1d5c44fe6986f696f7a5a +Author: Leo Orpilla III +Date: Fri Nov 6 22:25:10 2020 +1000 + + Add config + +commit 32dd0a5a5e5199a7fe0141667cb32a6df683c417 +Author: Leo Orpilla III +Date: Fri Nov 6 22:24:53 2020 +1000 + + Add training script + +commit 8e7bc12149df9f5e2a17b82f97b76b28ac3ef748 +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 22:24:07 2020 +1000 + + minor edits + +commit 95f5acadf8c93a44e5e4db61c4819035b47ceb77 +Author: A-Bayusuto <31500417+A-Bayusuto@users.noreply.github.com> +Date: Fri Nov 6 22:19:06 2020 +1000 + + Update README.md + +commit dd2b29e96eb339efb520101c78495d04a80ee48a +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 22:18:26 2020 +1000 + + added plots and images + +commit c5c622cd81cf7c4ee527bee1e529be9a6cb0372a +Author: Leo Orpilla III +Date: Fri Nov 6 22:18:05 2020 +1000 + + Add DCGAN model and utils + +commit ef69765b90e4e79ee0f9bf58277221cbe06abef7 +Author: Xin-Qi <34679917+Xin-Qi@users.noreply.github.com> +Date: Fri Nov 6 20:17:46 2020 +0800 + + Fix a spelling mistake on README.md + +commit 7ed145a0a88ad4e5e44fe360a6cb3ed3fafae91b +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Fri Nov 6 22:16:12 2020 +1000 + + Update main.py + +commit e020a9059dfebe51b585418a4a9239b494fce15a +Author: Xin-Qi <34679917+Xin-Qi@users.noreply.github.com> +Date: Fri Nov 6 20:16:06 2020 +0800 + + Delete useless mac generated file DS_store + +commit 352d1b73ea8deda0103efee8f4ce3023205f0797 +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Fri Nov 6 22:13:26 2020 +1000 + + write statement to plot the result + +commit 3d35dcf7d3d7e98ce371d23bbcc19377714603f7 +Author: Morgan Nierfeld +Date: Fri Nov 6 22:12:38 2020 +1000 + + Moved all files into a new folder as per the spec + +commit 19debde415bb0b8820dd1d1d9ea90ce96e613ae8 +Author: A-Bayusuto <31500417+A-Bayusuto@users.noreply.github.com> +Date: Fri Nov 6 22:10:26 2020 +1000 + + Update README.md + +commit 83070ac63c88da8212b2fe0b19200e9719e1bddc +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Fri Nov 6 22:08:12 2020 +1000 + + write statement to test the model + +commit 4e1a15c28abd36e80262d089ff57a67094d1a319 +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 22:02:13 2020 +1000 + + added images for readme + +commit f0da5cb9b0328f4dccb8097bca6965b6d20df941 +Author: Morgan Nierfeld +Date: Fri Nov 6 21:59:20 2020 +1000 + + corrected minor spelling mistake + +commit adb41e60fe63c3567e346b36d0e112fc25b3a066 +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Fri Nov 6 21:57:08 2020 +1000 + + compile and train model + +commit 3bf1a1db73a74148dd9912cf53bd187420407a3a +Author: Morgan Nierfeld +Date: Fri Nov 6 21:57:05 2020 +1000 + + corrected a referencing mistak + +commit a9318a97a60700d5fb0c8a4e108fa8116054c332 +Author: Morgan Nierfeld +Date: Fri Nov 6 21:53:19 2020 +1000 + + corrected some comments in the model.py + +commit 20762036ddcd75c0597ec77665de30b4db0c5f2c +Author: Morgan Nierfeld +Date: Fri Nov 6 21:51:19 2020 +1000 + + Finalised the README.md, corrected some poor sentences + +commit 1277610b93399573c2cdfa8b22d3634d36acb0f1 +Author: Leo Orpilla III +Date: Fri Nov 6 21:23:25 2020 +1000 + + Add image preprocessing script + +commit 529ece5cbdfb3165e26ff0bc82632c77fb40fa28 +Author: Alexander Bayusuto Wanengkirtyo +Date: Fri Nov 6 21:19:43 2020 +1000 + + added image + +commit d95903172b17d3c097d551827a81783f553cb9b9 +Author: MajorRedux +Date: Fri Nov 6 22:16:25 2020 +1100 + + Optimised generator and discriminator models. Good results at 7200 training set and 1440 testing set. Batch 4 at 20000 epochs. + +commit a02c4ed5e2f58a60a0a0f2aaed252e9811fd060c +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Fri Nov 6 21:02:49 2020 +1000 + + update for readme + +commit c622a3a0f5a4d697db65bf26e0bdba91179164ce +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Fri Nov 6 18:55:54 2020 +0800 + + improved_unet_pics + +commit 63b978f341f02479244ada88b225d9f74b63026d +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Fri Nov 6 18:52:59 2020 +0800 + + The_improved_Unet + +commit d1f00983a8f1b98e171ab44a2616da047aa2e16d +Author: Samuel Bethune +Date: Fri Nov 6 20:36:57 2020 +1000 + + model builds, trains, learns quickly + +commit 6a656f80714d1c10526e674520fbd3400410e94d +Author: George Mulhearn +Date: Fri Nov 6 20:29:34 2020 +1000 + + small readme updates, fleshed out some descriptions + +commit d394a1ecad146d73224f28ac0d190a81d426c5fc +Author: Alexander Bayusuto Wanengkirtyo +Date: Fri Nov 6 20:00:01 2020 +1000 + + added pictures + +commit a4664f26aae7e1058844f5c060af88a3e2053162 +Author: Samuel Bethune +Date: Fri Nov 6 19:49:47 2020 +1000 + + data generator working except for dict assignment issue; saving to prevent loss of progress in even of a crash + +commit 7167b69d30bf64bda8ac6cb43d44a0cbb4380f1d +Merge: bef94038 1b538ab8 +Author: Alexander Bayusuto Wanengkirtyo +Date: Fri Nov 6 19:42:10 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/A-Bayusuto/PatternFlow into topic-recognition + changes after making readme + +commit bef94038bf1ed82cd8ed78ca158593b78e1083be +Author: Alexander Bayusuto Wanengkirtyo +Date: Fri Nov 6 19:41:24 2020 +1000 + + sorted data input + +commit 95153fb5a47cdad896278b4fe06806ccaf910734 +Author: George Mulhearn +Date: Fri Nov 6 19:20:40 2020 +1000 + + added simple model results + +commit 040e47fa1f6c338d43214d99f031391034ca8e2a +Author: George Mulhearn +Date: Fri Nov 6 19:07:16 2020 +1000 + + :memo: added appendix to readme + +commit 225ad6d68bb85b379cc621048d9d651c1905c299 +Author: George Mulhearn +Date: Fri Nov 6 18:56:35 2020 +1000 + + small model output patch, began readme :memo: and added figures + +commit 7c802af15ec46b327de7c61f8541024213e68824 +Author: Tristan Samson +Date: Fri Nov 6 18:56:20 2020 +1000 + + Trying to get images inline + +commit 335b44a7ee373bf51cd7ea554dd7315e64b4940a +Author: Shrikant Agrawal <49804643+agrawal-s@users.noreply.github.com> +Date: Fri Nov 6 18:56:11 2020 +1000 + + Added DCGAN utilities file + +commit 655032c1c62037368a73bc65d92bc3885290920d +Author: Tristan Samson +Date: Fri Nov 6 18:52:23 2020 +1000 + + Set all figures to use HTML Markdown format + +commit 90ecb87bd7b2f6f65322ea10e5d3db45db7b1080 +Author: Tristan Samson +Date: Fri Nov 6 18:46:30 2020 +1000 + + Trying HTML markdown for images to set width + +commit 2f2007932ebc21ef40660a8bb940aacebe52b962 +Author: Tristan Samson +Date: Fri Nov 6 18:40:41 2020 +1000 + + Adding figures to README + +commit e4c1c7cccdd9018cc94f6f8cc19e1fd3798bb88c +Author: Yuris Cakranegara +Date: Fri Nov 6 18:36:04 2020 +1000 + + changed optimizer and improved model, fixed SSIM calculation and losses plot + +commit 156456148094d524a6bf20bccf9c7640d1e0592c +Author: Tristan Samson +Date: Fri Nov 6 18:33:24 2020 +1000 + + Testing adding figures to README + +commit d380a6d5b9ec84511dfb585b3569980202f4ab1e +Author: Yuris Cakranegara +Date: Fri Nov 6 18:27:50 2020 +1000 + + added SSIM calculation and a bit more documentation + +commit 9e64b6643ac5c9531641683d32936cdc2499c4ec +Author: Tristan Samson +Date: Fri Nov 6 18:26:06 2020 +1000 + + Train using a loss function based on the dice coef + + - Also computes the dice coefficient as a metric to report + +commit c7e04fa699d4b07045231e40664f90006b88230d +Author: Arushi Mahajan +Date: Fri Nov 6 17:53:22 2020 +1000 + + Completed UNet with ISIC data, working correctly. + +commit 9b311ad69a3d45d95eb9f044cc0a8ed3d21672a5 +Author: Arushi Mahajan +Date: Fri Nov 6 17:50:06 2020 +1000 + + Deleting loading the dataset file as it is already been covered in ISIC_dataset_with_UNET file + +commit ef9f05ca8ef320c5ab7db2de36336218a3d99a37 +Author: Isabel Peters +Date: Fri Nov 6 17:34:41 2020 +1000 + + Changed model to one-hot encoding. Model now making some predictions. Have fixed error in DSC usage but have not run after this fix yet. + +commit a223da98bf4f21027a44bffe80e5437004b936e2 +Author: Christopher Bailey +Date: Fri Nov 6 17:07:26 2020 +1000 + + Label test output + +commit e712270a6e6af9f2a7928b3dd20693ef43828ca4 +Author: Shobhan Mitra +Date: Fri Nov 6 16:56:30 2020 +1000 + + Readme file + +commit 2851921eead8edac0a0bc67042a9390b262a50b1 +Author: Ryan-RuixiangMa <73978959+Ryan-RuixiangMa@users.noreply.github.com> +Date: Fri Nov 6 16:52:32 2020 +1000 + + add comments + +commit 4801ef9e75b3143b7b5555539dde61abf5be3636 +Author: Ryan-RuixiangMa <73978959+Ryan-RuixiangMa@users.noreply.github.com> +Date: Fri Nov 6 16:51:01 2020 +1000 + + create the main function and add comments + +commit 1b8a4ac68f64b222d507e602841f882d3c2cc1d0 +Author: Shobhan Mitra +Date: Fri Nov 6 16:47:41 2020 +1000 + + Readme file + +commit 6314e80003a72186693f595c02745a51bcfe7e6e +Author: s4354061 +Date: Fri Nov 6 16:40:10 2020 +1000 + + Added images in readme to a folder called images and updated the readme.md file to corresspond to the new filepaths + +commit ea602958898b6e6105103863ab37c64c98f8e564 +Author: s4354061 +Date: Fri Nov 6 16:34:42 2020 +1000 + + Added images in readme to a folder called images and updated the readme.md file to corresspond to the new filepaths + +commit fc42c44696a4246f660e2032d2caabe9c41ce28d +Author: George Mulhearn +Date: Fri Nov 6 16:30:58 2020 +1000 + + :memo: commenting added to all functions and classes + +commit 86154a0ac7afac2b130749254b6ae75597c1abfa +Author: s4354061 +Date: Fri Nov 6 16:29:58 2020 +1000 + + Made changes to segment.py to load new Unet properly since the loss function is now custom. Also made finishing touches to the readme to put new results in. Ready to submit + +commit 947c30167c9c9fe5c365c9e6f7e265f12d7bdbd2 +Author: Shobhan Mitra +Date: Fri Nov 6 16:29:42 2020 +1000 + + dice scores for all predicted segmentation images + +commit c4db9c5e10c86c257940f83f4d131258b80796d7 +Author: Christopher Bailey +Date: Fri Nov 6 16:28:57 2020 +1000 + + Cleanup + +commit 59bef647fd0faf28826769e180b9d3d18f5e7de9 +Author: Isabel Peters +Date: Fri Nov 6 16:21:14 2020 +1000 + + Everything working except for model training... + +commit b32fde6d91b554b8ab6cb416e8eaf62cff6fb181 +Author: Max Hornigold +Date: Fri Nov 6 16:19:21 2020 +1000 + + Updated comments in solution.py and driver_script.py + +commit 635d6197a0b19b53388dd357b92ab6eaf2d8b135 +Author: Ryan-RuixiangMa <73978959+Ryan-RuixiangMa@users.noreply.github.com> +Date: Fri Nov 6 16:06:49 2020 +1000 + + Update README.md + +commit 679ed2ac9180464199ae8e022ea12d46bd75cbbb +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Fri Nov 6 16:06:28 2020 +1000 + + Minor Spelling and Grammar Improvements + +commit 31687566eee8fe2b088e1beade31c4d68097f715 +Author: Christopher Bailey +Date: Fri Nov 6 16:05:23 2020 +1000 + + Use dice distance as loss function + +commit 8e822c7ce2f7fd071f65a9bda48fb62e0701e69f +Author: Ryan-RuixiangMa <73978959+Ryan-RuixiangMa@users.noreply.github.com> +Date: Fri Nov 6 16:03:02 2020 +1000 + + Updating the Layout in README + +commit 1663843ca275d82fbd10436e86d315fd6d63057f +Author: Shobhan Mitra +Date: Fri Nov 6 15:52:09 2020 +1000 + + This is backdated/obsolete file.Please ignore this file + +commit 566372c06f65db37071f3735ec5ca1620b13dd20 +Author: Ryan-RuixiangMa <73978959+Ryan-RuixiangMa@users.noreply.github.com> +Date: Fri Nov 6 15:51:18 2020 +1000 + + modify the format in README file + +commit bc8bdfb92d558f3deb69d0acdb4698bf22848fd7 +Author: Ryan-RuixiangMa <73978959+Ryan-RuixiangMa@users.noreply.github.com> +Date: Fri Nov 6 15:49:01 2020 +1000 + + modify README file + +commit be47568bebc74836517e2c04c11d1d387371cfb0 +Author: Shobhan Mitra +Date: Fri Nov 6 15:46:52 2020 +1000 + + Practice/trial file,please ignore this file. + +commit 1b97d98de2bc1bc41a560a9e78e84dc499314469 +Author: Md Abdul Bari (ID 45420065) <72848988+s4542006@users.noreply.github.com> +Date: Fri Nov 6 15:46:28 2020 +1000 + + Update README.md + + Couple of lines of text were added to make things clearer + +commit d1e5cfd55013f1ca7fbcba7df8a3305acffe61ae +Author: Ryan-RuixiangMa <73978959+Ryan-RuixiangMa@users.noreply.github.com> +Date: Fri Nov 6 15:44:14 2020 +1000 + + upload the README document + +commit 32ee4dad72ffd305c64ee4d774b02aca5aa92fc6 +Author: Bosheng Zhang (Daniel) <740807262@qq.com> +Date: Fri Nov 6 15:43:14 2020 +1000 + + Update README.md + +commit 07a4c71e62133d2c17e2c679dc79af4b38293118 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Fri Nov 6 15:42:45 2020 +1000 + + Further refinement of the README.md + +commit 5d7c589a2c6090b1fcfb45122cee5249468bfbab +Author: Shobhan Mitra +Date: Fri Nov 6 15:40:25 2020 +1000 + + Edited this file which Contains function to Compile the model with all hyperparameters + +commit 1a3f4d69a11aa22fe761bd8bea0b60efc5b4cab7 +Author: George Mulhearn +Date: Fri Nov 6 15:35:13 2020 +1000 + + updated initial MSE calculator and changed some tf conversions, functions properly now + +commit 658a458397984048e2c98f18f6a7ade966fc14bb +Author: Samuel Bethune +Date: Fri Nov 6 15:34:01 2020 +1000 + + created ISIC_seg file and Jupyter Notebook for ISIC task; began building data generator + +commit fa43ec401024d600f66f4cec763c1fd5972863a7 +Author: Shobhan Mitra +Date: Fri Nov 6 15:33:36 2020 +1000 + + Added this file which contains function to preprocess data. + +commit 71d676070fdf2141c6a07fb08e241ced26369d2e +Author: Ryan-RuixiangMa <73978959+Ryan-RuixiangMa@users.noreply.github.com> +Date: Fri Nov 6 15:32:18 2020 +1000 + + create and upload the main program file main.py + +commit fadc171d630d17a08048c8f0c6f8d35387ef47d0 +Author: Ryan-RuixiangMa <73978959+Ryan-RuixiangMa@users.noreply.github.com> +Date: Fri Nov 6 15:27:43 2020 +1000 + + define the model with model.py + +commit 479856b07d436cdc8a5c73761ffdd42b2e927300 +Author: Shobhan Mitra +Date: Fri Nov 6 15:27:41 2020 +1000 + + To run the total code through command line prompt + +commit 8fa989e858330e7ff6d6b9f515447f74c110fe98 +Author: Christopher Bailey +Date: Fri Nov 6 15:22:29 2020 +1000 + + Fixed Dice similarity coefficient with alternative code + +commit 18e5480a6e220480f989b631580adcc4aa5b9d59 +Author: Shobhan Mitra +Date: Fri Nov 6 15:21:05 2020 +1000 + + Contains function for loading dataset + +commit 37e527acbb803df37d04886728e21f03cb1bf491 +Author: Max Hornigold +Date: Fri Nov 6 15:19:25 2020 +1000 + + Added UNet diagram + +commit 832411cef812ed216b97ea0dd4dcbff4ea1b6118 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Fri Nov 6 15:18:22 2020 +1000 + + Major README improvements, mainly to instructions + +commit 847672de4d9c76fd101f4f1189d7c715aee0a7b6 +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 15:11:57 2020 +1000 + + added sample real images + +commit da363d2e85b80dbc6833e042beaade9b2055e07a +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 15:10:45 2020 +1000 + + sample real images for readme file + +commit b028d8bb47af4323ba1326f30971b235767e52b3 +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 15:08:27 2020 +1000 + + Update README.md + +commit 9bdf896585a587955b5309f3c58fcf1061e8f26f +Author: Shobhan Mitra +Date: Fri Nov 6 15:04:41 2020 +1000 + + Segmentation output from random input with ground truth + +commit 86d7e094013a0f5827d3502d8ac0bdffbcf34339 +Author: Shobhan Mitra +Date: Fri Nov 6 15:00:27 2020 +1000 + + Classification Accuracy With Respect to Epochs + +commit b01fc390304ba47ad21861816115080f8ad7391d +Author: Shobhan Mitra +Date: Fri Nov 6 14:58:21 2020 +1000 + + Dice loss with respect to Epochs + +commit 8f41bf4a58cc90231869fe2cdc26d6ed1251e663 +Author: Shobhan Mitra +Date: Fri Nov 6 14:54:36 2020 +1000 + + Model converging and evaluating with random output + +commit 8e49b48a2e5cda64b3e6fa6d89238011bbd5ee71 +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 14:53:49 2020 +1000 + + Update README.md + +commit e18a11287aec4376e0dc921c2b45c0fa526089ca +Author: Christopher Bailey +Date: Fri Nov 6 14:51:31 2020 +1000 + + Tried to implement dice coefficient and failed + +commit 6ee1d6af6c8b9553fb47703997e387d46552814d +Author: Shobhan Mitra +Date: Fri Nov 6 14:50:06 2020 +1000 + + Model Architecture built + +commit 78a19904e2639b8a9b49f2cf481e47fe78847e17 +Author: Shobhan Mitra +Date: Fri Nov 6 14:43:57 2020 +1000 + + Driving Script Command + +commit 9711f5b5357b8779e054f12c3883fb580bbdb3ae +Author: Vincentius Aditya Sundjaja +Date: Fri Nov 6 14:41:53 2020 +1000 + + added main function in driver.py, modifief README.md + +commit 59d6d4f7ca0486307731871fa4e740475bc9003c +Author: Shobhan Mitra +Date: Fri Nov 6 14:36:34 2020 +1000 + + UNET_Architecture + +commit 05309bfbed3f774669e286091fb12c14547a0ac5 +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 14:24:11 2020 +1000 + + Update README.md + +commit cd82c989f48171e4ae6c3f4aa71a33fc8cc87231 +Author: Arushi Mahajan +Date: Fri Nov 6 14:20:37 2020 +1000 + + updated readme + +commit 2a2fcbcb67ae9f9663f7b7e4b3106d95c5569ad3 +Author: Arushi Mahajan +Date: Fri Nov 6 14:17:08 2020 +1000 + + final output added + +commit 74cafb197f492a3bf834492506bb0cb361f58137 +Author: Arushi Mahajan +Date: Fri Nov 6 14:15:39 2020 +1000 + + accuracy plot added + +commit 93e7b0662273d1a99d54bd200ae2ca4f04a841ca +Author: Arushi Mahajan +Date: Fri Nov 6 14:14:48 2020 +1000 + + loss plot added + +commit e363d4df8bcb05705cd5cd7355b393d9f5ca302a +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 14:14:04 2020 +1000 + + removed redundant line + +commit b529b1faf526a8ea139a0a89ace1eeadf715ecc5 +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 14:13:07 2020 +1000 + + Update README.md + + minor edit + +commit 5491edb0c7782e8745376c2762353e414daf669c +Author: Sid-Uniyal <72907292+Sid-Uniyal@users.noreply.github.com> +Date: Fri Nov 6 14:12:22 2020 +1000 + + Update README.md + + Readme file typo correction + +commit 3644330fea6838cd07af1ff47c8ffc33f9b762c3 +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 14:09:26 2020 +1000 + + Update README.md + + image links didn't work + +commit 53ed17f21a99fcc56d9e5de12c8db0dbd87193fc +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 14:07:30 2020 +1000 + + Update README.md + +commit cc2981d5c045ff1dc722124aa1e48a173313707b +Author: PeterDinhNgo +Date: Fri Nov 6 14:04:56 2020 +1000 + + removed dilated conv layers from generator as no discernible denoising occured + +commit f8423bf3a90c753c991839d09ce5d10df508dfa3 +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Fri Nov 6 13:54:59 2020 +1000 + + build the improved_u_net model + +commit eec0ede1d26768b01706143ed6d2bdd847fd78f7 +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Fri Nov 6 13:53:40 2020 +1000 + + improve the modules + +commit 11f90e53f927b89409d653784d2b1eea05178db3 +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 13:32:35 2020 +1000 + + most recent changes + + thought there was something wrong with the model script as the functions would not run in the driverscript properly but turns out I just needed to restart kernel + +commit d7e390f331f2f063a82804beebff364bd209ff01 +Author: Samuel Bethune +Date: Fri Nov 6 13:22:09 2020 +1000 + + added upsampling/segmentation layers again, reliable dice score ~.9 after one epoch + +commit cde28c41aea64715679e209d87c4c54e8b657b01 +Author: Tristan Samson +Date: Fri Nov 6 13:21:36 2020 +1000 + + Added computation of dice coefficient. + + - Also added code to the 'driver' section of the code to shuffle input + data before training occurs. + - Currently the model is not achieving the dice coefficient we need so + we will try running for extra epochs and adjust the proportion of + test/val/training sets. + +commit e96a07f164e1ad909dade7e77aab4fa019692692 +Author: Jaydon Hansen +Date: Fri Nov 6 13:18:31 2020 +1000 + + Fixed file paths for training script + +commit 4f54a60429b55c4dbbf520b7cf7f6fb22fc0e744 +Author: Jaydon Hansen +Date: Fri Nov 6 13:15:36 2020 +1000 + + Reverted change for bug fix caused by 'ATTRIBUTIONS.txt' + +commit d43ad9fe0e5b5ffec152e22c3dd244dcf331a165 +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 13:05:28 2020 +1000 + + ssim example output + +commit 089c6f4455d941f8032431bd247d60bcfd5ed94c +Author: amyzhao11 <55608946+amyzhao11@users.noreply.github.com> +Date: Fri Nov 6 13:02:21 2020 +1000 + + created README.md + + read me file that contains info + +commit 8f08c708dcc4c1a389c0cfe1df5d00e587a602e7 +Author: JosephAaron3 <62556129+JosephAaron3@users.noreply.github.com> +Date: Fri Nov 6 13:01:23 2020 +1000 + + Updated readme + +commit a8678399a92d86f8a4b9b68ed4fdbdfc1be4cbb1 +Author: Amy Zhao +Date: Fri Nov 6 12:58:28 2020 +1000 + + added files to new repo + +commit 24f7089530eba7f52d814e2e3c28a10813e01521 +Author: Pragatheeswari-dev <65264601+Pragatheeswari-dev@users.noreply.github.com> +Date: Fri Nov 6 12:12:20 2020 +1000 + + Updated ReadME.md file with Results. + +commit 564178eaf8a031e81a8f8fa1c68f347a0bdd2720 +Author: Xin-Qi <34679917+Xin-Qi@users.noreply.github.com> +Date: Fri Nov 6 10:07:40 2020 +0800 + + Fix some mistakes in README.md + +commit cc45f05db983532031e0f00d4739d2e2cc53f9e0 +Author: Pragatheeswari Velraj +Date: Fri Nov 6 11:57:16 2020 +1000 + + Added Training loss PLot and Generated Images for results in README.md + +commit 3e8648f7806191f56e1969351fbfae5f58f49fc2 +Author: Samuel Bethune +Date: Fri Nov 6 11:28:37 2020 +1000 + + small-scale model much improved by batchnorm, seeing dice score ~.9 + +commit 69e7556d40bf2be837a0f2aa1de65cd7caa9a90c +Merge: 0828db25 04acdd69 +Author: Pragatheeswari Velraj +Date: Fri Nov 6 11:17:13 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/Pragatheeswari-dev/PatternFlow into topic-recognition + +commit 0828db259a7d60b5a43addc72c1be7eb4bf978fd +Author: Pragatheeswari Velraj +Date: Fri Nov 6 11:12:33 2020 +1000 + + Added feature to plot training loss and made updates related to that. + +commit cb008c81027a7f78e5fbe10da139f140d8e50e66 +Author: Matthew Jones +Date: Fri Nov 6 11:05:56 2020 +1000 + + Validation and batch sizes + +commit 22a7a3b4a23d78a18be350a210043c48f3cf2b7f +Author: peiran66 +Date: Fri Nov 6 11:01:40 2020 +1000 + + change the plot ways + +commit 40712f7ec2da354929769ca0f912fe5ca57c64db +Author: peiran66 +Date: Fri Nov 6 10:56:53 2020 +1000 + + change the plots + +commit 5eeee41d4de891c30652dd95f1dca299b3d89e59 +Author: Jaydon Hansen +Date: Fri Nov 6 10:42:44 2020 +1000 + + Implemented training script for model + +commit fc7f3c6d66ce209d34fa4df1cd571b3106576939 +Author: Jaydon Hansen +Date: Fri Nov 6 10:04:38 2020 +1000 + + Fixed filename issue with training_utils + +commit ff7efc3831e7c4ae168f5b2b885369cba7699d43 +Author: Jaydon Hansen +Date: Fri Nov 6 10:03:16 2020 +1000 + + Added data generator function to load images + +commit 0c1c32d4801ce09e7699bcf068b1c7bc96389908 +Author: Samuel Bethune +Date: Fri Nov 6 09:24:27 2020 +1000 + + added upscaled segmentation layer to small-scale model, had to abort training as GPU too slow for some reason + +commit a2d6807ea538c947d799ea540c3757d2bca7253a +Author: tusharvinayaraj <70696778+tusharvinayaraj@users.noreply.github.com> +Date: Fri Nov 6 08:49:20 2020 +1000 + + Update MODEL_imp.py + +commit f680b1fd2f19855d687d3f5b76e86b72e5cadb55 +Author: tusharvinayaraj <70696778+tusharvinayaraj@users.noreply.github.com> +Date: Fri Nov 6 08:42:33 2020 +1000 + + Update README.md + +commit b602138be2add259d6cfd3c6915864e2307ac717 +Author: tusharvinayaraj <70696778+tusharvinayaraj@users.noreply.github.com> +Date: Fri Nov 6 08:40:04 2020 +1000 + + Update README.md + +commit 82f456896b52efa90aa5c19b1161b61153d87730 +Author: unknown +Date: Fri Nov 6 08:39:16 2020 +1000 + + got output image, added + +commit 12053748467e4b8c41d3e53aa34ef8ce05e834f2 +Author: Yuris Cakranegara +Date: Fri Nov 6 02:12:44 2020 +1000 + + fix not existing directory and wrong argument errors in main + +commit 7f8b84dcc48b4f0d184ca6675f0f8e3cdc90dfa5 +Author: Yuris Cakranegara +Date: Fri Nov 6 02:05:19 2020 +1000 + + added main script + +commit 4e236624019c01db1ab61c38780a454ecf62d485 +Author: Christopher Bailey +Date: Fri Nov 6 02:03:33 2020 +1000 + + Changed to padded convolutions + +commit e511cf9afc2b848e105eaf345686aba6eae37a4b +Author: yorkequ98 +Date: Thu Nov 5 23:55:06 2020 +0800 + + Added requirements.txt + Added a more detailed description of the VAE architecture. + +commit 14f5d34aa1cf332ac253211b2f258a3c430892ed +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 01:45:56 2020 +1000 + + delete draft + +commit fd0be34450498b105717b1e276829063c4b959bb +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 01:45:14 2020 +1000 + + add jupyter notebook file + + This file is including all the pre-processing, training, prediction and result display. + +commit 719e7653df2d8294f70486fb35f574979e527a0c +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 01:42:47 2020 +1000 + + edit README.md file with more details + +commit 722ee83cd06fd8d23fa0c3284984264d43ec0f00 +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 01:39:31 2020 +1000 + + add README.md file + +commit beeed0fd83ab586b9cb552be9c70e124849ce3bd +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 01:37:12 2020 +1000 + + add images for README.md + +commit 267c2344cd9a7f349f1c6d437ee15825649c015e +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 01:34:50 2020 +1000 + + add prediction result for README.md + +commit 84ece67614b5109d470309e677582e3c68471b84 +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 01:33:40 2020 +1000 + + add prediction result for README.md + +commit b91fd3977227cdb7a0148c6e03094d20f584be02 +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 01:32:19 2020 +1000 + + add prediction result image for README.md + +commit 7cca3ef7af04ccda2cdbc15e036414cfcf809cb8 +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 01:31:20 2020 +1000 + + create readme image folder + +commit dc50a0f676b1a8345e44b180c9b5cce97b73ed8c +Author: vincentiusadityas +Date: Fri Nov 6 01:30:24 2020 +1000 + + Update README.md + +commit fe142a5fac88f6de87aaa3712aa7640cd4cc7d12 +Author: vincentiusadityas +Date: Fri Nov 6 01:26:18 2020 +1000 + + Update README.md (fixed images) + +commit 73baa933b71244d7dc8dac910ad5950b60c15027 +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 01:22:52 2020 +1000 + + calculate dice coefficient and plot result + +commit d2e38a17edcf006304022c2a6ea8135465912d54 +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 01:22:02 2020 +1000 + + add dice function and plot image function + +commit 9b6a52674aa246f6b223f257a3c66ca0d50b6a44 +Author: Vincentius Aditya Sundjaja +Date: Fri Nov 6 01:18:38 2020 +1000 + + modified README.md + +commit 5af8d64d4c0174acc6aac91f5f407074b6d5cd2d +Author: Vincentius Aditya Sundjaja +Date: Fri Nov 6 01:05:04 2020 +1000 + + renamed the folder, cleanup unnecessary files, and updated README.md + +commit 6fc06122e9cdc0197ad037aa21b03e2144586ea2 +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 00:45:47 2020 +1000 + + make predictions + +commit 46721b19d71ff042efbdaa2af17e64d2850598f5 +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 00:45:12 2020 +1000 + + add more epochs while training + +commit d9ad6e664dab0427c1b84dc4f40bea51b4b233e4 +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 00:43:41 2020 +1000 + + add fit model helper function + +commit 6c67717efcc976c9f75c3cc4de4f86c8998d9db3 +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 00:42:33 2020 +1000 + + train model and fit model + +commit 9d501fee96079f4758a7941ac36efda130df8a1c +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 00:40:46 2020 +1000 + + creating u-net model + +commit 59b7e1eefb5f867f8ae016be68ee806a272a1236 +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 00:39:50 2020 +1000 + + some functions to pre-process image + +commit 65b8977eab1b7c3ac59050a3cdf8febda84a8d4c +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Fri Nov 6 00:33:41 2020 +1000 + + split data into training set and testing set + +commit b2807ba27b6ec7c357605b9a778141bd56e435db +Author: Samuel Bethune +Date: Fri Nov 6 00:33:40 2020 +1000 + + implemented further troubleshooting strategies including he initialization; very beneficial + +commit 5d67942c6b03d7f7e4618c64b0d65ed5f5e10a0e +Author: Yuris Cakranegara +Date: Fri Nov 6 00:25:33 2020 +1000 + + calculate and store discriminator and generator losses + +commit dbc040ef20321112f2dadabd4fce540ba5134740 +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Thu Nov 5 23:56:23 2020 +1000 + + write three modules + + context, unsampling and localization + +commit 3d5aca90277b6789ea4209394cf6dfaf9aaa4d92 +Author: Raghav Dhanuka +Date: Thu Nov 5 23:48:38 2020 +1000 + + Completed ISICs Improved U-Net, working correctly. + +commit 1c57000b39e35b89e47499d05ad506c910a89b55 +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Thu Nov 5 23:48:29 2020 +1000 + + Data pre-process + +commit d8d3702cb2ab6bf13435502cd2adfe7e3c5e16a8 +Author: Arushi Mahajan +Date: Thu Nov 5 23:48:01 2020 +1000 + + Updated Readme + +commit c657b55d5470f8e9771c45b9e0f36477598b688c +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Thu Nov 5 23:46:54 2020 +1000 + + write statement to load data and get train data + +commit 1840f9cc57c9ec8f570db45205c1152356c14c29 +Author: Arushi Mahajan +Date: Thu Nov 5 23:45:35 2020 +1000 + + Final ISIC dataset with Unit file + +commit 51ef29218f2dd1ed311d117328925a16b22b822e +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Thu Nov 5 23:45:23 2020 +1000 + + first commit and load images + +commit 0134f8858725222d9fdcf903302a52940fa94ff8 +Author: Raghav Dhanuka +Date: Thu Nov 5 23:40:27 2020 +1000 + + renamed algo name and fixed the same in readme file + +commit eb38b9d8ca7077c1fd6e4e1762285cd75e026b5c +Author: Yuris Cakranegara +Date: Thu Nov 5 23:36:09 2020 +1000 + + fix assertion error in dataset loader + +commit 1b538ab8dacf2dbe5ef3c732bbe745c37af52bbf +Author: A-Bayusuto <31500417+A-Bayusuto@users.noreply.github.com> +Date: Thu Nov 5 23:35:47 2020 +1000 + + Update README.md + +commit c12f09fd5cf9aa6f2a1bba42126ff650b0a1f351 +Author: A-Bayusuto <31500417+A-Bayusuto@users.noreply.github.com> +Date: Thu Nov 5 23:35:13 2020 +1000 + + Update README.md + +commit 7041004052c30b8d799a21bb059a99405473c872 +Author: A-Bayusuto <31500417+A-Bayusuto@users.noreply.github.com> +Date: Thu Nov 5 23:31:24 2020 +1000 + + Update README.md + +commit a0b9acc8d81ccee1eef2fbe5d402d4045787b6ce +Author: Arushi Mahajan +Date: Thu Nov 5 23:30:14 2020 +1000 + + Final Test driver script + +commit 064037b69c8bc1e64acf6ac8f9e92b505144be43 +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Thu Nov 5 23:25:53 2020 +1000 + + upload pic for imporved unet structure + +commit d8366647f0dabad31759287735a2aa6401e19f5b +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Thu Nov 5 23:25:13 2020 +1000 + + Create unet.png + +commit 64ffc82a87ba73076b166c7dfe2915a9c909d9e1 +Author: Yuris Cakranegara +Date: Thu Nov 5 23:24:14 2020 +1000 + + added documentation on training function + +commit 1efe716636721fee353d882666bb6ee7ee2ceec0 +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Thu Nov 5 23:24:00 2020 +1000 + + Delete unet.png + +commit 9e61adeba8af91aec10c5cbab1785dd0148d3e16 +Author: Alexander Bayusuto Wanengkirtyo +Date: Thu Nov 5 23:23:16 2020 +1000 + + cleanup + +commit dccb65a54f3e2c3b19664066ffa1d5906629cebd +Author: Yuris Cakranegara +Date: Thu Nov 5 23:22:56 2020 +1000 + + added more documentation for the model + +commit e74848c4435d8cce280e4182441299366742448b +Author: Raghav Dhanuka +Date: Thu Nov 5 23:21:39 2020 +1000 + + Added inline comments and Updated Readme file with the overall outputs + +commit 78594690fa1ca4136adcdd20fc639e0985f0c5c6 +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Thu Nov 5 23:15:58 2020 +1000 + + Delete unet.txt + +commit df494af6d42a60a10a0a4932aa6bb8d1530098ea +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Thu Nov 5 23:15:31 2020 +1000 + + upload pic for improved unet structure + +commit 19e273f8cd403a197331028b9614dd8f7b097151 +Author: Neal_45539873 <48573607+w895540347@users.noreply.github.com> +Date: Thu Nov 5 23:14:53 2020 +1000 + + Create unet.txt + +commit 2247ed47fa15d846133bd38fd66e027c33053291 +Author: PeterDinhNgo +Date: Thu Nov 5 23:08:54 2020 +1000 + + discriminator classification accuracy and dilation layers added to generator + +commit 747b3a5f268f6e1e635ee0dc83af72c71602bdf9 +Author: Yuris Cakranegara +Date: Thu Nov 5 23:07:48 2020 +1000 + + fixed errors in dataset loader and added DCGAN model + +commit b1a698a949706ea04f3feca7f33a33c3e9f3f8eb +Author: Samuel Bethune +Date: Thu Nov 5 23:07:39 2020 +1000 + + unable to get large model to learn; began troubleshooting by trying much smaller model; immediate improvement + +commit 975caaa42cb0d2fa6b6abfe6bda23e67d4ec40c8 +Author: lilCheesePuff <69615159+lilCheesePuff@users.noreply.github.com> +Date: Thu Nov 5 23:04:00 2020 +1000 + + Updated the Figure 3 description + +commit 3372cec2811700287789fbd049c07ec9c932714b +Author: lilCheesePuff <69615159+lilCheesePuff@users.noreply.github.com> +Date: Thu Nov 5 23:00:21 2020 +1000 + + Added the images with this figure labels + +commit acb650454ee1c5b9e2ec01a1fa6585908143d3d2 +Author: Kelsey McGahan +Date: Thu Nov 5 22:50:41 2020 +1000 + + The model is running but converging incorrectly + +commit 53717ca7093b5f495fb15d3bb3a24b487aff550d +Author: Arushi Mahajan +Date: Thu Nov 5 22:49:26 2020 +1000 + + Updated readme + +commit 486aaf80f389e7bd87d3686ccfaf7146b3d3952c +Author: Arushi Mahajan +Date: Thu Nov 5 22:47:51 2020 +1000 + + Added picture in readme + +commit 67f30bd5a0382a1623b155da8fe88d2101d4255f +Author: lilCheesePuff <69615159+lilCheesePuff@users.noreply.github.com> +Date: Thu Nov 5 22:44:41 2020 +1000 + + Confirming the images are in the README.md file + +commit 8ce8a628f01e306952aaaffbd6c5686ae3ab3d8c +Author: Arushi Mahajan +Date: Thu Nov 5 22:43:43 2020 +1000 + + U-Net Architecture image + +commit e257442f225d90b88a37cb5d6e76953d273c3e92 +Author: lilCheesePuff <69615159+lilCheesePuff@users.noreply.github.com> +Date: Thu Nov 5 22:40:17 2020 +1000 + + Update README.md + +commit 47c0ee506dfd1b8f21fc6af4258564e441eb4d3e +Author: Morgan Nierfeld +Date: Thu Nov 5 22:38:40 2020 +1000 + + Adding the images for the README file into the external repo + +commit e664f3366fded421cc9737b735e5b87421c31156 +Author: Morgan Nierfeld +Date: Thu Nov 5 22:31:19 2020 +1000 + + Updated commenting in driver.py and model.py. Updated the README.md. Now pushing to the remote repository to then upload PNGs in the README.md + +commit b6a3f23097b496f28cb0f2d559add7d7aca7ea3b +Author: Arushi Mahajan +Date: Thu Nov 5 22:21:22 2020 +1000 + + Readme updated + +commit 362237062deb134efb0cb8d732b607c73411f977 +Author: Yuris Cakranegara +Date: Thu Nov 5 22:00:46 2020 +1000 + + added dataset loader + +commit 8198df095c5490a76fb999222970c15e6c0bfd6d +Author: Xin-Qi <34679917+Xin-Qi@users.noreply.github.com> +Date: Thu Nov 5 20:00:23 2020 +0800 + + update the picture link in README.md + +commit 2f4ace3ac9d655adbc12d3a659bb55d76313267c +Author: Alexander Bayusuto Wanengkirtyo +Date: Thu Nov 5 21:58:24 2020 +1000 + + added plot_model into models file and moved files into solution folder + +commit a4461bcbb52b6dc23547d473221309896775b513 +Merge: c1d162cf c9cd3f2a +Author: Xin-Qi <13851176890@163.com> +Date: Thu Nov 5 19:53:11 2020 +0800 + + Merge branch 'topic-recognition' of https://github.com/Xin-Qi/PatternFlow into topic-recognition + This merge operation is to track the deletion operation on github website. + +commit 4905e519fcbe90872edd6b2beb2f64f6b5b97754 +Author: Tristan Samson +Date: Thu Nov 5 21:53:08 2020 +1000 + + Splitting input data into train/val/test portions. + + - Also set up the basic structure of the log file. + +commit d8b99098ef45f78c3ea05194b19d6955b764ca6b +Author: Raghav Dhanuka +Date: Thu Nov 5 21:52:17 2020 +1000 + + Final Output file created with dice score for test data + +commit c1d162cfde33a2e1031fff9967961ca6f3eae0c0 +Author: Xin-Qi <13851176890@163.com> +Date: Thu Nov 5 19:44:51 2020 +0800 + + upgrade content On README.md + +commit 51c4d89630589359aebbf5d3b3a28bfd48a21d3d +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Thu Nov 5 21:44:09 2020 +1000 + + Added dice coefficient loss + +commit c9cd3f2a0f7763275c98d2d2afffbb39584663d4 +Author: Xin-Qi <34679917+Xin-Qi@users.noreply.github.com> +Date: Thu Nov 5 19:42:32 2020 +0800 + + Delete val_set_result.jpg + +commit dd65c0ceb7859d64523bbea9a443f8f4edb9d165 +Author: Xin-Qi <34679917+Xin-Qi@users.noreply.github.com> +Date: Thu Nov 5 19:42:17 2020 +0800 + + Delete train_set_result.jpg + +commit fbcf975429ebfb1a2a85d49b8e18649317712715 +Author: Xin-Qi <34679917+Xin-Qi@users.noreply.github.com> +Date: Thu Nov 5 19:42:05 2020 +0800 + + Delete test_set_result.jpg + +commit 37432e6bfa97764c8a01f8a35092224bd51f8e51 +Author: Xin-Qi <13851176890@163.com> +Date: Thu Nov 5 19:37:28 2020 +0800 + + upload result images + +commit 352839fa2137426c50092cb546faafcabe9ac398 +Author: Alexander Bayusuto Wanengkirtyo +Date: Thu Nov 5 21:29:17 2020 +1000 + + added driver and models_and_functions files + +commit dac374b5128b6c1e97b21b5cd7758b6aedf5fe59 +Author: JosephAaron3 <62556129+JosephAaron3@users.noreply.github.com> +Date: Thu Nov 5 21:27:50 2020 +1000 + + Updated readme formatting + +commit 6a27109c2e8ed359c255b3a609b1f04d4afc7bcb +Author: Xin Qi +Date: Thu Nov 5 21:26:23 2020 +1000 + + upload result images + +commit ff9394ffa7c80347f568cbb103923a16874d7c7a +Author: Joseph Menesch +Date: Thu Nov 5 21:25:29 2020 +1000 + + Fixed image name + +commit bf8ebce7a86e2ae0652a890454d62488c9c28bbe +Author: JosephAaron3 <62556129+JosephAaron3@users.noreply.github.com> +Date: Thu Nov 5 21:24:22 2020 +1000 + + Updated readme (finished) + +commit c18a74aa784267ae397eb889ef3750ed8244a8ea +Author: Joseph Menesch +Date: Thu Nov 5 21:06:51 2020 +1000 + + Updated output and readme + +commit 6d9c16bfef44fc444f7cb60ccf9e901f7c080ab1 +Author: Joseph Menesch +Date: Thu Nov 5 21:05:04 2020 +1000 + + Added full commenting to code + +commit 1a2f8329dc3d8f2188b88496758a8cf22d3dd562 +Author: Alexander Bayusuto Wanengkirtyo +Date: Thu Nov 5 20:48:25 2020 +1000 + + changed dice to vector formula, reached 0.9 + +commit 97c7d7c6fbc79ea9dc223e1374fdaadd6588f648 +Author: tusharvinayaraj <70696778+tusharvinayaraj@users.noreply.github.com> +Date: Thu Nov 5 20:47:39 2020 +1000 + + Update README.md + +commit 4dd21765777df53b1ab931f1043dd54765489b9b +Author: tusharvinayaraj <70696778+tusharvinayaraj@users.noreply.github.com> +Date: Thu Nov 5 20:46:21 2020 +1000 + + Update README.md + +commit 7a34de743010360e328d267fe3938aa513b58990 +Author: Raghav Dhanuka +Date: Thu Nov 5 20:41:09 2020 +1000 + + Adding the .py file for algorithm(Final_Project.py) and for main(main.py) also adding the output_of_model in .ipynb format + +commit 302a56b98502f6688ef8d4e2528705b1f183894c +Author: Raghav Dhanuka +Date: Thu Nov 5 20:32:43 2020 +1000 + + determining the dice score for each test data set + +commit 52e7ca7ba615ea96827521f03aa5a9e398574c73 +Author: Arushi Mahajan +Date: Thu Nov 5 20:24:55 2020 +1000 + + Readme upload + +commit f2eaf79cf66288acca64ab7ec7e2647d91a78f39 +Author: peiran66 +Date: Thu Nov 5 19:53:46 2020 +1000 + + edit images in readme. + +commit 4635fa1789c6716a22dc2b4185b5e22ff137bb2e +Author: tusharvinayaraj <70696778+tusharvinayaraj@users.noreply.github.com> +Date: Thu Nov 5 19:45:17 2020 +1000 + + Update README.md + +commit 3eca605c65ec0e2b132752f51c8044e66c4939cb +Author: tusharvinayaraj <70696778+tusharvinayaraj@users.noreply.github.com> +Date: Thu Nov 5 19:41:48 2020 +1000 + + Update README.md + +commit 961a25be0dc1a299f8a66792d075653d3d040345 +Author: peiran66 +Date: Thu Nov 5 19:40:52 2020 +1000 + + edit readme + +commit ab75d4bb1e7ff7b993548f521b198130402db779 +Author: unknown +Date: Thu Nov 5 19:36:07 2020 +1000 + + resource folderr done + +commit d4959967ae208c6a2126b21ed5d36ff1d05a70bb +Author: Xin-Qi <13851176890@163.com> +Date: Thu Nov 5 17:33:57 2020 +0800 + + Fix a plot bug and add content into README.md + +commit df33298cf4b94e3eab777b5c365069ff8b743e7d +Author: tusharvinayaraj <70696778+tusharvinayaraj@users.noreply.github.com> +Date: Thu Nov 5 19:31:35 2020 +1000 + + Create resources + +commit 2496fb9378b244da8140246dd530a8130ebc55a8 +Author: Yi0724 <73456187+Yi0724@users.noreply.github.com> +Date: Thu Nov 5 19:20:42 2020 +1000 + + Create draft.txt + +commit 7759f9ed87fac0f7e46f12e35564487b24ade43c +Author: Shobhan Mitra +Date: Thu Nov 5 19:17:37 2020 +1000 + + Model compile,Segment preprocess, data load, driving script code file added + +commit 5ad7991be508edd21c10a7eeb1df0a67e4dd1846 +Author: Ryan-RuixiangMa <73978959+Ryan-RuixiangMa@users.noreply.github.com> +Date: Thu Nov 5 19:14:52 2020 +1000 + + Upload the principle image of DCGAN + +commit 361a90165b722c12ad36abf88a0430be6777f351 +Author: Ryan-RuixiangMa <73978959+Ryan-RuixiangMa@users.noreply.github.com> +Date: Thu Nov 5 19:11:54 2020 +1000 + + Delete image.txt + +commit 5e90f80d40645bcbb38730ee0791c7fdf13336b7 +Author: Ryan-RuixiangMa <73978959+Ryan-RuixiangMa@users.noreply.github.com> +Date: Thu Nov 5 19:10:54 2020 +1000 + + Upload the images of output + +commit b048ccc3d9b528bfef018e9d3926e7d2fa27b1de +Author: tusharvinayaraj <70696778+tusharvinayaraj@users.noreply.github.com> +Date: Thu Nov 5 19:09:50 2020 +1000 + + Update README.md + +commit 11c1aba05bcf061e7e1c8a2f577e08d906bed650 +Author: Ryan-RuixiangMa <73978959+Ryan-RuixiangMa@users.noreply.github.com> +Date: Thu Nov 5 19:09:12 2020 +1000 + + initialize the image folder for images + +commit e2dd82220d51741bab1703a0890da39185266daf +Author: Shobhan Mitra +Date: Thu Nov 5 19:07:10 2020 +1000 + + UNET_Model code added + +commit bb9c004bdcd3ec94884c6ccd4135f9f496002635 +Author: peiran66 +Date: Thu Nov 5 19:06:21 2020 +1000 + + edit readme + +commit 44b4049f42831b3d29fbe8102d8e89be1285d95e +Author: tusharvinayaraj <70696778+tusharvinayaraj@users.noreply.github.com> +Date: Thu Nov 5 19:05:03 2020 +1000 + + Update README.md + +commit c3cd09600ade6f93e79d2761b201d901df98795b +Author: tusharvinayaraj <70696778+tusharvinayaraj@users.noreply.github.com> +Date: Thu Nov 5 18:59:23 2020 +1000 + + Update README.md + +commit 3f17d2974535f191a6f8279ac8304fd743db1f66 +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Thu Nov 5 16:58:53 2020 +0800 + + 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+Date: Thu Nov 5 16:18:58 2020 +0800 + + adjusted_dice + +commit cd4815210d84ad0f524c469ff3acdec048dbb252 +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Thu Nov 5 16:12:51 2020 +0800 + + add pic + +commit 461a6bfac92dfa91ae17e9e625b749efb4a0199f +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Thu Nov 5 18:12:31 2020 +1000 + + Delete modelfit.PNG + +commit ea04892bb9affd2ec9051ff8c5ceee51fbdd8811 +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Thu Nov 5 18:12:21 2020 +1000 + + Delete Capture.PNG + +commit 619808214a75b15ef700d61d8dab774bf4c1a0c6 +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Thu Nov 5 18:11:55 2020 +1000 + + Update README.md + +commit f03829cba7647a647aa424e9d4736b94255b47ff +Author: Samuel Bethune +Date: Thu Nov 5 18:07:12 2020 +1000 + + fixed missed connections, hyperparameters still require tuning; documentation improved + +commit 9c8a69d51c71a3e0c906d6e075e6f042e97777dc +Author: Xin-Qi <13851176890@163.com> +Date: Thu Nov 5 16:06:36 2020 +0800 + + Add algorithm description, problem introction and other content on README.md + +commit 4d999c33ca675351e0ec73b5e875738213bac3b7 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Thu Nov 5 18:04:14 2020 +1000 + + Update README.md + +commit fad0a1ed9e55f77286cf985d05edf3decee6c81e +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Thu Nov 5 18:00:09 2020 +1000 + + Update README.md + +commit 1b0d228ed249bcd2cd5399d0ff49f40b87681db7 +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Thu Nov 5 15:54:41 2020 +0800 + + pics + +commit ef61e56631b311c003a5129ebb34cb8774c1b324 +Author: peiran66 +Date: Thu Nov 5 17:51:49 2020 +1000 + + delete an empty row. + +commit 6622c0a67e7334df1f48d6aa32df90c87df2c327 +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Thu Nov 5 17:48:59 2020 +1000 + + adjustment + +commit 33dfd87cd5d6a08b701f3fa838e6b0c6e6e3b630 +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Thu Nov 5 17:47:52 2020 +1000 + + Rename README to README.md + +commit 20163af7ae51a467c82b74defa02510c5b6eed51 +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Thu Nov 5 17:46:19 2020 +1000 + + Summary + +commit 7fe7074337c5a535cb773b8898944be31a26067d +Author: Xin-Qi <13851176890@163.com> +Date: Thu Nov 5 15:28:40 2020 +0800 + + change the Relu activation to Leaky_Relu activation + +commit 0f78d832eece13cf77970749efdccc9afc1e87d7 +Author: peiran66 +Date: Thu Nov 5 17:27:13 2020 +1000 + + I add cmap='gray' in plt.imshow in mask in order to change image into + black and white. + +commit ba603605db4e84ad5fd812add2a8668b0640fc7b +Author: peiran66 +Date: Thu Nov 5 17:24:39 2020 +1000 + + change cv2.imread in:to image.imread. + +commit 1263480d6510ea7b831ab82c118c8a05f720ba05 +Author: peiran66 +Date: Thu Nov 5 17:21:34 2020 +1000 + + add readme.file. + +commit 5dd4ffc6a5617ec21bb3bd8106083cbaace1af51 +Author: Dream Gonsalves +Date: Thu Nov 5 17:16:42 2020 +1000 + + Modified Readme.md + +commit 1d5360e1c9965509b42d28871f55181d91a357ae +Author: Wenjun Zhang +Date: Thu Nov 5 17:12:43 2020 +1000 + + Done: Arrange functions; Plot predictions; Comments on some functions. Need: Figure out how to import py file; Change loss function to dice losss + +commit 6a872e7bcf3b5052da8483b78623a48058e1fbf5 +Author: Dream Gonsalves +Date: Thu Nov 5 17:05:02 2020 +1000 + + Added DCGAN.py helper file, Main.py,Main.ipynb + +commit 34acaad141d75c79c0b583b4074d625cd2129595 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Thu Nov 5 16:27:15 2020 +1000 + + Update README.md + +commit 13d90e8e4e5515f311615b163be32636779a2b7b +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Thu Nov 5 14:05:18 2020 +0800 + + File including everything + +commit b783f3e0b9742b050e11d121b72f16bd3d95cca2 +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Thu Nov 5 16:03:00 2020 +1000 + + delete and move to my file + +commit 73142860543b15b1169730ecedb39529c4f96782 +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Thu Nov 5 16:02:51 2020 +1000 + + delete and move to my file + +commit 77172f7e107961a362c379f6d32f0f4704385787 +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Thu Nov 5 16:02:44 2020 +1000 + + delete and move to my file + +commit 35906454089b9adba1915f2df535bd7792d90db1 +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Thu Nov 5 16:02:34 2020 +1000 + + delete and move to my file + +commit a14730140ded182584ffed70f2ecee70e60507dd +Author: Bosheng Zhang (Daniel) <740807262@qq.com> +Date: Thu Nov 5 15:42:18 2020 +1000 + + Update README.md + +commit 93f8289caaea868cdd9ab16cfa117a48306289f9 +Author: danielzhangau <740807262@qq.com> +Date: Thu Nov 5 15:35:08 2020 +1000 + + create separate test file to test dsc in testdataset + +commit 44479f42842db4fbb25f48fa889a9aba89bffe7a +Author: Xin-Qi <13851176890@163.com> +Date: Thu Nov 5 13:30:08 2020 +0800 + + tune some hyper parameters of the model.(model_1.1) + +commit 882a1243384c6a139b8a9bfbcee7f944e9b47773 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Thu Nov 5 14:22:04 2020 +1000 + + Fixed sequence array size and type issues + +commit 9821757208b769a98e0ed32990c6ba22167a5326 +Author: Xin-Qi <13851176890@163.com> +Date: Thu Nov 5 12:12:18 2020 +0800 + + delete extra code + +commit 6e80345bdcbd918c1c9bccf4a3776456c1fa31ab +Author: Isabel Peters +Date: Thu Nov 5 14:10:37 2020 +1000 + + Added driver script. Rearranged other files to be functions to run in driver script. + +commit bc2c05b29c69cfed0f91ca04e68148bf9227cdba +Author: Tristan Samson +Date: Thu Nov 5 13:50:03 2020 +1000 + + Implemented and trained basic U-net model. + + - Trained model on a subset of provided data for testing purposes. + - Gets good accuracy and faithful segmentations on sample images. + - Decided to bitch it and just do the basic U-net (easy). Might try + the improved U-Net tomorrow if I have time. + +commit b7f2c3eb804ef2aefe993748541432b65ff065af +Author: Xin-Qi <13851176890@163.com> +Date: Thu Nov 5 11:39:55 2020 +0800 + + add batch normalization into the improved Unet + +commit 21bf7699a1ba946a839780e5c9202c1ade98f1fa +Author: Isabel Peters +Date: Thu Nov 5 13:33:51 2020 +1000 + + Model created. Have not tried training. + +commit 99f729047631ede6eae0d97054064d5648c33131 +Author: Xin-Qi <13851176890@163.com> +Date: Thu Nov 5 11:26:54 2020 +0800 + + add comments in model.py and driver.py + +commit b918dea8f259f14261c93bb8017c034890e141fb +Author: Isabel Peters +Date: Thu Nov 5 12:54:54 2020 +1000 + + Renamed ISIC_UNET to load_images + +commit 405b3d763361796834f620cd0824f3e714cee843 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Nov 5 10:51:19 2020 +0800 + + Update README.md + +commit 04acdd695867e0a227b2f8cf96b0db5c8f2645da +Author: Pragatheeswari-dev <65264601+Pragatheeswari-dev@users.noreply.github.com> +Date: Thu Nov 5 12:49:27 2020 +1000 + + Added Modeling and Training details + +commit b53e1c98d02f30948d56a21520eb77d852a7c92a +Author: Siddharth Uniyal +Date: Thu Nov 5 12:41:35 2020 +1000 + + Readme file & images updated + +commit 601a6409635dc1f7b719fd72183c548aa8e6bffc +Author: Siddharth Uniyal +Date: Thu Nov 5 12:40:34 2020 +1000 + + Readme file & images updated + +commit ec76f20442e745a9f97a8acb773f291c3a69d2fe +Author: Pragatheeswari-dev <65264601+Pragatheeswari-dev@users.noreply.github.com> +Date: Thu Nov 5 12:26:00 2020 +1000 + + Added input sample images + +commit 2bd27342f580c0bcb0564100cadcea7522270675 +Author: Shrikant Agrawal <49804643+agrawal-s@users.noreply.github.com> +Date: Thu Nov 5 12:24:53 2020 +1000 + + Purging unwanted files. + +commit a8a6478edfbbaa341197fa4a9f52ecc5e38da31d +Author: Shrikant Agrawal <49804643+agrawal-s@users.noreply.github.com> +Date: Thu Nov 5 12:24:25 2020 +1000 + + Purging unwanted files. + +commit 58ffe7a9ef9de07bf48242345e92f2e53bccfd14 +Author: Shrikant Agrawal <49804643+agrawal-s@users.noreply.github.com> +Date: Thu Nov 5 12:24:06 2020 +1000 + + Purging unwanted files. + +commit 0385ef5445e045f57e65cb43de2bfb6af199db28 +Author: Samuel Bethune +Date: Thu Nov 5 12:23:06 2020 +1000 + + added more pygraphviz dependencies to myenv.yml + +commit a8b03a8dea7bacc5cd44f94b9fc07083dbec4208 +Author: Shrikant Agrawal <49804643+agrawal-s@users.noreply.github.com> +Date: Thu Nov 5 12:22:15 2020 +1000 + + Purging unwanted files. + +commit e93a82218c643f5937314a7352c0f2f8cf41033b +Author: Siddharth Uniyal +Date: Thu Nov 5 12:21:46 2020 +1000 + + Readme file is updated + +commit 4afd63da45b71895c2f1a178e367c3275e528dd1 +Author: Shrikant Agrawal <49804643+agrawal-s@users.noreply.github.com> +Date: Thu Nov 5 12:21:43 2020 +1000 + + Purging unwanted files. + +commit cefde066add809d72973517bc35ee2f9ad7ad815 +Author: Siddharth Uniyal +Date: Thu Nov 5 12:19:40 2020 +1000 + + Readme file is updated + +commit eb402b83f1e7394e09fe16bb77b92be41561aaab +Author: Siddharth Uniyal +Date: Thu Nov 5 12:18:22 2020 +1000 + + Readme file is updated + +commit 16bde831050028698ab378bfc3e94efb6fffaf37 +Author: Siddharth Uniyal +Date: Thu Nov 5 12:17:04 2020 +1000 + + Readme file is updated + +commit 9bc1a47fd33dbe286ca3d432374dde8ef4fc2814 +Author: Samuel Bethune +Date: Thu Nov 5 12:13:55 2020 +1000 + + updated myenv.yml to include pygraphviz and pydot installs for plot_model functionality + +commit bb4c5fe41aa2e36fd85990ba0b439de9996b983a +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Nov 5 10:13:36 2020 +0800 + + Update README.md + +commit 26266fb5ac71665bf9e3712e2ed301b89b66c438 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Nov 5 10:12:54 2020 +0800 + + Update README.md + +commit c71323403259ebd204daceafb980c18220cc55e4 +Author: Siddharth Uniyal +Date: Thu Nov 5 12:08:37 2020 +1000 + + Readme file is updated + +commit 43fc1c0eefc99314872b2342237e8eaed746543a +Author: Christopher Bailey +Date: Thu Nov 5 11:59:58 2020 +1000 + + Final unpadded convolution version, model appears to be working but with poor similarity. Requires changing to padded convolutions and implementing dice similarity coefficient metric and evaluation step + +commit f6bb3e2f6e6ffd5c471328d071a085bdb346275b +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Nov 5 09:54:21 2020 +0800 + + Update README.md + + update description + +commit f7f2082a398dca231a5bfbcf7e2c8d53ac6534de +Author: Siddharth Uniyal +Date: Thu Nov 5 11:50:34 2020 +1000 + + Readme file is updated + +commit d51597f4cae962cadc5bb5ea1d156e92543ec7d8 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Nov 5 09:43:41 2020 +0800 + + Add files via upload + + model structure and parameters + +commit 18b85dc296709596e4524dd3ca778b0d6983bff7 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Nov 5 09:35:46 2020 +0800 + + Update README.md + + update description and resluts. + +commit 590d4fbbbed7862a36c460433eb6b27aba50f1c3 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Nov 5 09:35:13 2020 +0800 + + Update README.md + + update description and resluts. + +commit 563ad9bc62687994d3c3701c0e4a0dab7162a4ba +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Nov 5 09:33:44 2020 +0800 + + Add files via upload + + test accuracy + +commit eb823de460a11d852793f3e624853431743013a5 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Nov 5 09:23:35 2020 +0800 + + Update README.md + +commit e92d20ad6391c1d2bb2b3d25a111e8e8b5e5240e +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Nov 5 09:23:12 2020 +0800 + + Update README.md + +commit cb3ecf651c246e9723b5a9f79243365ae7089c97 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Nov 5 09:18:10 2020 +0800 + + Update README.md + + update results + +commit 1785ab5b6b1b10eb78219994be8b54df4005fa09 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Nov 5 09:14:54 2020 +0800 + + Update README.md + + updata description + +commit 8151c473727960aae96f47c362f01fbd5f489715 +Author: Ganze Zheng <60834422+Marcozgz@users.noreply.github.com> +Date: Thu Nov 5 11:03:12 2020 +1000 + + Updated README.md. Fixed images' path. + +commit 47cdd826e545323e4ece20cd9ebd56ac3e614c3b +Author: Dream Gonsalves +Date: Thu Nov 5 11:03:07 2020 +1000 + + Formated Readme.md + +commit 8dbe76d72838be2a9a3b2850d13329a33fa8e746 +Author: Dream Gonsalves +Date: Thu Nov 5 10:57:58 2020 +1000 + + Readme.md completed + +commit dbaa9ceacf2fdf5008319ce83a16eb1487d2c55a +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Nov 5 08:57:30 2020 +0800 + + Add files via upload + + Training and validation loss + +commit 2a9b44090259c05c3dc7e0c666ef3794db9ff5b1 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Nov 5 08:56:52 2020 +0800 + + Add files via upload + + Training and validation accuracy + +commit 391e8792fe69437f088895eb79ac34a7a58f3f0c +Author: Samuel Bethune +Date: Thu Nov 5 10:56:05 2020 +1000 + + implemented dice loss + +commit 48640c1cb57ebafc1c06f07049dc785b0871aa63 +Author: Dream Gonsalves +Date: Thu Nov 5 10:31:16 2020 +1000 + + Added Images Folder + +commit 2e41750708d8dce927955eff6390f83c4ea8ed98 +Merge: 7c56326a c30443d8 +Author: Dream Gonsalves +Date: Thu Nov 5 10:10:44 2020 +1000 + + Merge remote with local. + Merge branch 'topic-recognition' of https://github.com/dreamgonsalves/PatternFlow into topic-recognition + +commit 7c56326a019e430f357b042cd5738217c9703221 +Author: Dream Gonsalves +Date: Thu Nov 5 09:00:23 2020 +1000 + + Added images in Readme.md + +commit 9b8e50590a351c2f8f842f15ddcf2490761b6b01 +Author: Dream Gonsalves +Date: Thu Nov 5 08:52:14 2020 +1000 + + Modified and Added images to Readme.md + +commit c30443d8dce5342066cc36ab05a4ff3a421b7652 +Author: dreamgonsalves +Date: Thu Nov 5 08:41:24 2020 +1000 + + Delete test file + +commit ad39b24408aed6faa28d55897c122159feedbac9 +Author: dreamgonsalves +Date: Thu Nov 5 08:40:57 2020 +1000 + + Delete Test file + +commit d5baa1c849c3b2a354ca912871386ef63a51e298 +Author: Dream Gonsalves +Date: Thu Nov 5 08:32:56 2020 +1000 + + Initial Readme.md file added + +commit 786916f65c815a0208189b62c29f6b1f3d279f11 +Author: Declan Healey +Date: Thu Nov 5 04:44:21 2020 +1000 + + Generate metrics and loss graphs and predicted masks from model. + +commit 255e40c131c5c4ca5e72a179920f3ba6693ccb43 +Author: Declan Healey +Date: Thu Nov 5 04:38:23 2020 +1000 + + Graphs and predicted masks from model. + +commit 95fc7fed9ed3c4a98c3ff1b7202ca8352b421659 +Author: Joseph Menesch +Date: Thu Nov 5 01:42:48 2020 +1000 + + Added custom learning rate schedule + +commit f79c002d6555b6ab5cbad171f8a3548d6b7781bf +Author: Reece Jocumsen +Date: Thu Nov 5 01:40:14 2020 +1000 + + Moved contents of previous main.py into a function in dcgan.py, and created a driver file to run the DCGAN easily. + +commit fef4213dbeb4b4176d169635c2dbc4949b8f2a89 +Author: Raghav Dhanuka +Date: Thu Nov 5 01:23:48 2020 +1000 + + Fixed Loss function and updated the modified plots + +commit fa70d0d7bcbfee705807aeec1b19884407effc5a +Author: Pragatheeswari-dev <65264601+Pragatheeswari-dev@users.noreply.github.com> +Date: Thu Nov 5 01:10:58 2020 +1000 + + Update README.md + +commit dca724064f4ebd310fb064370bdfc08ea3ace532 +Author: Pragatheeswari-dev <65264601+Pragatheeswari-dev@users.noreply.github.com> +Date: Thu Nov 5 01:10:09 2020 +1000 + + Create README.md + +commit 3d39b2210703cd3b12c975ba587185884d558920 +Author: Echozhe <13126592200@163.com> +Date: Wed Nov 4 22:47:16 2020 +0800 + + final update + +commit ca2b518786839bb45b59db35183b246115db487e +Author: Joseph Menesch +Date: Thu Nov 5 00:41:47 2020 +1000 + + Changed transpose convs to upsamples + convs + +commit 92e2fd673ccd48dba39a2b6501ee353c7dfe672e +Author: Raghav Dhanuka +Date: Thu Nov 5 00:33:15 2020 +1000 + + fixed minor changes to Readme.md file + +commit 448ed93a73d4a9576d2fe00889351ef3e9afcba6 +Author: Raghav Dhanuka +Date: Thu Nov 5 00:25:41 2020 +1000 + + Updating the Readme.md file + +commit 57c870b9547a5a453dd2eadf42355fc3219a55f7 +Author: Joseph Menesch +Date: Thu Nov 5 00:21:43 2020 +1000 + + Corrected where number of feature maps are reduced + +commit d0f5ca31fd468f4fbd831205ec9adbec45d231e2 +Author: Raghav Dhanuka +Date: Thu Nov 5 00:08:26 2020 +1000 + + Adding all the Images used in Readme.md file as the concept of prrof + +commit 41d29bf10eba95004a6c9ae47814cb7c6f99a277 +Author: Echozhe <13126592200@163.com> +Date: Wed Nov 4 21:42:26 2020 +0800 + + script update + +commit 8cedc78f68ba03fdf741a50b48ea79a6c704f9e0 +Author: Shobhan Mitra +Date: Wed Nov 4 23:34:40 2020 +1000 + + UNET Model + +commit 8484acf1322be54c60a118637ae5b876bd105d34 +Author: Christopher Bailey +Date: Wed Nov 4 23:33:46 2020 +1000 + + Cleanup + +commit b6747a0ce2325dbca6af00efa8ff63d8b9722e0c +Author: Christopher Bailey +Date: Wed Nov 4 23:32:41 2020 +1000 + + Cleanup + +commit 3b2be603e0d9b23a4e9d7786b705b2e971e12097 +Author: Christopher Bailey +Date: Wed Nov 4 22:38:40 2020 +1000 + + Cleanup prints + +commit d15d1f565747287f98893c8570b5c9b7d94a025c +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Wed Nov 4 22:34:55 2020 +1000 + + Update README.md + +commit 09a6d6bc4b666abf89c1c949b1866580617012a7 +Author: Tristan Samson +Date: Wed Nov 4 22:32:00 2020 +1000 + + Added standard U-Net model and starting working on improved U-Net + +commit 4eaa9845777e614799a625121cfc3f4618bc5025 +Author: Christopher Bailey +Date: Wed Nov 4 22:29:39 2020 +1000 + + Pretrain predictions seem to work but trained predictions are blank? + +commit 73dd96a3f3a08aa7fcbf2d4a7056ef835d4cbdff +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Wed Nov 4 22:17:54 2020 +1000 + + Update README.md + +commit dd31f55b1b0817fa8da19b1dadae01d54e226d8b +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Wed Nov 4 22:15:37 2020 +1000 + + Made function list into table + +commit 85d1e5d8e380f43583997b9d77a301a177859cd6 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Wed Nov 4 22:06:03 2020 +1000 + + Update README.md + +commit b3385e8849de1ae3aa03f5ef007dd0aa8f82d4ae +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Wed Nov 4 21:58:31 2020 +1000 + + Improved script function definitions + +commit 04f420929ddef0fdb78ce5cca1976d6442a1edd2 +Author: Echozhe <13126592200@163.com> +Date: Wed Nov 4 19:57:52 2020 +0800 + + update script + +commit bb1bac6de851f197e65d27c2a148a3b57f0332c0 +Author: Christopher Bailey +Date: Wed Nov 4 21:35:41 2020 +1000 + + Try category cross entropy + softmax output layer + +commit 0755a3c3823c71a23ce37bcc85afa7e3e6c5b7da +Author: Christopher Bailey +Date: Wed Nov 4 21:30:33 2020 +1000 + + Try binary cross entropy + sigmoid output layer + +commit 68f6f5c1433355a2c54e657cd2f595089f000cfb +Author: Christopher Bailey +Date: Wed Nov 4 21:22:50 2020 +1000 + + Fix output dimensions, fix show predicted masks + +commit 39966aa052cd27c994f9346cf40b6de5d2594fdb +Author: Vincentius Aditya Sundjaja +Date: Wed Nov 4 20:53:48 2020 +1000 + + Created the improved unet model + +commit 207a32aed99368f0abeb14b0ee590961032918a9 +Author: Shobhan Mitra +Date: Wed Nov 4 20:11:11 2020 +1000 + + report writing started + +commit c2c81ded8844a6041e1232a9bbeba4e7bab6028b +Author: Raghav Dhanuka +Date: Wed Nov 4 20:01:02 2020 +1000 + + Minor Bugs fixed for loss function and comments added to the main script + +commit 2c511e786f5a0dcdaa5466d80bdce5b21b3ea447 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Wed Nov 4 19:13:39 2020 +1000 + + Improved discussion about poor predictions + +commit 00ea94076b8216fe59b7902f47ad10f06ea8b73f +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Wed Nov 4 16:50:45 2020 +0800 + + dicecoefficient.code + +commit f3b04d39a639fce0bedcf63d2c3dff51d5255734 +Author: Raghav Dhanuka +Date: Wed Nov 4 18:48:13 2020 +1000 + + Architecture for Improved U-Net implemented + +commit 0752b601801f2e36a977b47466d0b83e1ae88771 +Author: Siddharth Uniyal +Date: Wed Nov 4 18:03:16 2020 +1000 + + added images + +commit 4fdf612edd57be32bcda48a06884151102b5fd78 +Author: Siddharth Uniyal +Date: Wed Nov 4 17:52:13 2020 +1000 + + added images + +commit 720f01d5315f3061c825d336cb3cc641c5758282 +Author: Siddharth Uniyal +Date: Wed Nov 4 17:51:49 2020 +1000 + + added images + +commit 3d1eafcb40ad9c521d26d63f23f4623563e59a9e +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Wed Nov 4 15:20:15 2020 +0800 + + modelfit.code + +commit cc9d47524a9c3cc9f1da01c58b0be1cbfcb24dd2 +Author: Siddharth Uniyal +Date: Wed Nov 4 17:20:14 2020 +1000 + + comment updation in py files + +commit 1f3bbd6d47e69d476c97785f33775d015e819df3 +Author: Siddharth Uniyal +Date: Wed Nov 4 17:14:02 2020 +1000 + + py files added + +commit 14f14cc58b5779bab392bf1b84b49ffa1fe2ec1e +Author: Arushi Mahajan +Date: Wed Nov 4 17:12:57 2020 +1000 + + updated code with comments + +commit 5cc2cfc0febcb1e48e114f7073bfa5345b68845e +Author: Arushi Mahajan +Date: Wed Nov 4 17:12:29 2020 +1000 + + updated test driver script + +commit 712f8363e61ce906b700a8d77902adc943c0a599 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Wed Nov 4 17:11:54 2020 +1000 + + Changed second training image + +commit 0568221a90be4d91352e29b94ca6b79d14955893 +Author: Max Hornigold +Date: Wed Nov 4 17:08:23 2020 +1000 + + driver script comments + additional image + +commit 38884c931cce9e391fb98a96b4013c3510dc8aa9 +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Wed Nov 4 15:07:39 2020 +0800 + + datapreprocessing.code + +commit 8e6a0339336c43f1b364a1cbbe568018bee51498 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Wed Nov 4 17:05:26 2020 +1000 + + Update README.md + +commit dad661791be46487a03074a071ed9e6e48d9399c +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Wed Nov 4 15:05:13 2020 +0800 + + loadfile_code + +commit 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+commit 3e11ea90289f4662fb7db1cfd03998a453386051 +Author: xiao <69885082+xiaosun1995@users.noreply.github.com> +Date: Wed Nov 4 16:19:06 2020 +1000 + + Update README.md + +commit 54f053511643763396a6240c093d554435452641 +Author: xiao <69885082+xiaosun1995@users.noreply.github.com> +Date: Wed Nov 4 16:12:18 2020 +1000 + + Add files via upload + + environment.yml file to create anaconda env. + +commit 85d31bc757f37a610016b64b40e86fc60c6cfd08 +Author: Siddharth Uniyal +Date: Wed Nov 4 16:12:16 2020 +1000 + + Adding driver script and Updated README file + +commit a86c7bb4523e87228544da4ec8e7cf44d6b52d6d +Author: xiao <69885082+xiaosun1995@users.noreply.github.com> +Date: Wed Nov 4 16:11:18 2020 +1000 + + Update README.md + +commit 0f4f60c776c1fe55c1c75086d0676f2945ce8e8e +Author: Ganze ZHENG <1062168846@qq.com> +Date: Wed Nov 4 16:02:13 2020 +1000 + + Fixed epoch number. + +commit b86d32f3af66ebc450ce285b86b882a1fd4f2ee6 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Wed Nov 4 15:58:20 2020 +1000 + + Move model definition to separate IUNet_model.py file + +commit 0a7e1c8d1ef9376675760398995d27148f169bc2 +Author: Ganze ZHENG <1062168846@qq.com> +Date: Wed Nov 4 15:56:57 2020 +1000 + + Fixed typos and format. + +commit c9b67b3bd13537f1d0c2226d1ef77ef99fbf722a +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Wed Nov 4 15:53:46 2020 +1000 + + Model added to segmentation.py + +commit 7b771d6aa1a5eb15fd284ab00bfd4a6bfb690fff +Author: Christopher Bailey +Date: Wed Nov 4 15:53:36 2020 +1000 + + Include upsampling convolution from UNet paper. Model does not appear to converge + +commit 8f03932a686e8d8d0523333c2460426076acea23 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Wed Nov 4 15:52:53 2020 +1000 + + Fix iunet_sequence y shape and implement in data processing + +commit 2dcf532b0b3eadeddcaabf2e022f5137ccde94b5 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Wed Nov 4 15:46:00 2020 +1000 + + Added function definitions + +commit 2cc6d14dec868f203d6ff49d6b924f4bcdc43342 +Author: xiao <69885082+xiaosun1995@users.noreply.github.com> +Date: Wed Nov 4 15:42:59 2020 +1000 + + Update UNet_model.py + +commit 084864345ab08bd0d7a2e51398014f26e34bf50e +Author: xiao <69885082+xiaosun1995@users.noreply.github.com> +Date: Wed Nov 4 15:38:41 2020 +1000 + + Update README.md + +commit bfdf8e016a93d2e84b71668d17b9a0596646a920 +Author: Shrikant Agrawal <49804643+agrawal-s@users.noreply.github.com> +Date: Wed Nov 4 15:38:34 2020 +1000 + + Purge unwanted file. + +commit 276e0b943bdaba5c54f5f4befeb9ac9a620d3d17 +Author: Shrikant Agrawal <49804643+agrawal-s@users.noreply.github.com> +Date: Wed Nov 4 15:37:59 2020 +1000 + + Rearranged files to subfolders. + +commit 08a46528003908bc32eee4cd7120c6746f70ac00 +Author: Shrikant Agrawal +Date: Wed Nov 4 15:35:58 2020 +1000 + + Rearranged files. + +commit 04001ae566a11e65bf26522c1ed23bb0056caa4e +Author: Shrikant Agrawal +Date: Wed Nov 4 15:31:51 2020 +1000 + + Added .py file for driver notebook + +commit f86964b64eaf2b170ce49024f02e7bf252c45b88 +Author: Shrikant Agrawal +Date: Wed Nov 4 15:30:10 2020 +1000 + + Final changes to driver notebook. + +commit 6a7eaa031616ad2f9c9e16f63edea332c6aefe34 +Author: Christopher Bailey +Date: Wed Nov 4 15:14:42 2020 +1000 + + Changed model parameters to better fit UNet paper. Model does not appear to converge + +commit 3b4be37a7ca3ec768aba682d8b680dee0a6f4751 +Author: Shrikant Agrawal +Date: Wed Nov 4 14:55:12 2020 +1000 + + Updated readme for image alignment + + didnt work. + +commit 95035c3b806f6378f20cdeef655d6729f8795e79 +Author: xiao <69885082+xiaosun1995@users.noreply.github.com> +Date: Wed Nov 4 14:47:59 2020 +1000 + + Update README.md file. + +commit 8a045c9d5eaf4f7cbc15e4fdf1d0135412db2313 +Author: Shrikant Agrawal +Date: Wed Nov 4 14:45:43 2020 +1000 + + Completed readme file. + +commit 0c266523bc0bc43bfdfd3b0d33ae474193700810 +Author: Alexander Bayusuto Wanengkirtyo +Date: Wed Nov 4 14:38:23 2020 +1000 + + switched to https://arxiv.org/pdf/1802.10508.pdf model, at 0.845 + +commit 34ba3ed9e1322af5b049b99fdfa945ff971ba345 +Author: Shrikant Agrawal +Date: Wed Nov 4 14:37:15 2020 +1000 + + Added screenshot of generated images. + +commit 8d792b297005b0dc99e47d2134a914c3b5a20e11 +Author: Tristan Samson +Date: Wed Nov 4 14:34:35 2020 +1000 + + Starting two main files - 1 for the model and 1 for the driver. Setting up driver to load a sample of data to get format right + +commit 22b4e13b6fa48532a027c7ea46cb8231581b693e +Author: Shrikant Agrawal +Date: Wed Nov 4 14:32:12 2020 +1000 + + Added plots for SSIM and Losses. + +commit fe7a5b7a00e3b5f27daf595b9dd48f742f5cfca1 +Author: Shrikant Agrawal +Date: Wed Nov 4 14:26:36 2020 +1000 + + Added screenshots of test runs. + +commit b3880db15713f73b978a9feeb49715efa618d79b +Author: TungChinYang <73922230+TungChinYang@users.noreply.github.com> +Date: Wed Nov 4 13:49:32 2020 +1000 + + Create code + +commit 540368ccb75d22e34ff9fc3b5fdeb8008cfec453 +Author: Ganze ZHENG <1062168846@qq.com> +Date: Wed Nov 4 13:30:22 2020 +1000 + + Added Readme file and images for description. + +commit 5d47f8fb973ab7f4fce5df297bf3181f70d385d3 +Author: Ganze ZHENG <1062168846@qq.com> +Date: Wed Nov 4 13:15:19 2020 +1000 + + Completed tuning hyper-parameters and tested that the whole program is working correctly. + +commit a22faa0d34eaa96074af126e15efdc3cdb9acc96 +Author: Shrikant Agrawal +Date: Wed Nov 4 12:43:32 2020 +1000 + + Updated main file to include DCGAN utilities. + +commit 7e3135436db5f7fc9855033553a2c3b44bc45885 +Author: Shrikant Agrawal +Date: Wed Nov 4 12:09:52 2020 +1000 + + Added final driver Notebook. + + Notebook name: S4562394_DC_GAN_Main_notebook.ipynb + +commit 67e988b880b88daff1db5df5aa87320a0c624230 +Author: Shrikant Agrawal +Date: Wed Nov 4 12:08:06 2020 +1000 + + New image helper for official notebook. + + Added abstracted functionalities to load , modify and resize image and return tf array. + +commit 31a5dc8184d2db6e64f727c12428342b34c9be9f +Author: Bin Lyu +Date: Wed Nov 4 11:30:16 2020 +1000 + + Add DCGANTrue image to resource folder. Use this image in readme. + +commit 0b9b08ce0e495dda1c380d27e9c25315731af49b +Author: Bin Lyu +Date: Wed Nov 4 11:23:38 2020 +1000 + + Add some pictures into readme and complete head block. + +commit a314a44cae1920922eb50cac163096157be261b5 +Author: Tristan Samson +Date: Wed Nov 4 10:43:58 2020 +1000 + + Repo setup + +commit 225b251294160d605eb803850b730f3e26ef55bc +Author: Matthew Costello +Date: Wed Nov 4 10:38:32 2020 +1000 + + Add environment.yml + +commit e657a0dc6fb7855cc3582598d16bd00b6c324b38 +Author: Shrikant Agrawal +Date: Wed Nov 4 10:35:49 2020 +1000 + + Modified readme file path. + +commit 013ad136ba38d9e8216a94ec228126d1eecc2024 +Author: Matthew Costello +Date: Wed Nov 4 10:34:38 2020 +1000 + + Fixing more spelling mistakes + +commit 51bcca2ef14a07e23bab94684ac5decd4fbecea1 +Author: Shrikant Agrawal +Date: Wed Nov 4 10:31:56 2020 +1000 + + Added material to readme.md + +commit a0ff8b17f054d5f96234499fcc10d7e186474c9a +Author: Matthew Costello +Date: Wed Nov 4 10:31:24 2020 +1000 + + Fixing mistakes README.md + +commit e837c9973bda51799685ee60739232ab04f12fce +Author: Tristan Samson +Date: Wed Nov 4 10:30:24 2020 +1000 + + Initial commit of readme file + +commit fac2c19b42225e8069d58c83e375f024d588ccec +Author: Matthew Costello +Date: Wed Nov 4 10:30:01 2020 +1000 + + Added more to README.md + +commit f3c826c0ad67f158b1bf11c87eecb5e2443d38d9 +Author: Bin Lyu +Date: Wed Nov 4 10:15:29 2020 +1000 + + Add some comments and finish readme file. + +commit bfa06dcb7a75fff05a1f218156b894235d850e8d +Author: Matthew Costello +Date: Wed Nov 4 09:37:57 2020 +1000 + + Fix README.md Links + +commit de304917c2d2dcdd285836066d0b30750ce2c657 +Author: Matthew Costello +Date: Wed Nov 4 09:36:03 2020 +1000 + + Update README.md more + +commit 285d3b52ba08751772177da8d1bb3ac95b6afa5d +Author: Pragatheeswari Velraj +Date: Wed Nov 4 04:14:53 2020 +1000 + + Task-6->Updated loss,training loop and display function. Ganmodel.py->modified activation function. + +commit 249d3ffe5885d1c6726ab64d97ba62521e2b3962 +Author: Kelsey McGahan +Date: Wed Nov 4 01:50:02 2020 +1000 + + Fixed shape of image data array and now have rough beginnings of the model architechure + +commit 664d6bf9e6a4f484a5495009c769d4c7cd378735 +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 23:33:49 2020 +0800 + + update README + +commit 3b86c75aaa7dd54d0fa86f46f889edd0813a99ea +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 23:27:32 2020 +0800 + + update script + +commit 22e49ea6b58f4932271579f9b21795c07a34a963 +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 23:18:39 2020 +0800 + + README.md and test-script.py update + +commit 488437e8c2aca6c099d63ecd4c55bacab78245d6 +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 23:01:43 2020 +0800 + + add pictures + +commit d9824f60767244d985d9dc36bff399f19d7f23fb +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 22:58:59 2020 +0800 + + update all + +commit 31fe5869dc5da7ac9e80547a87a6fc7244201550 +Author: Pragatheeswari Velraj +Date: Wed Nov 4 00:58:33 2020 +1000 + + Updated Task-6 file-> parameters and combined model + +commit 4f8c44c8c94acda5e6f068cad44012b7be376cb4 +Author: Pragatheeswari Velraj +Date: Wed Nov 4 00:41:45 2020 +1000 + + Added Ganmodel.py->generator,discriminator. Task-6->updated with Ganmodel module. + +commit 1433fb2ec53066800e5139e97768bd3bf4e94d37 +Author: Joseph Menesch +Date: Wed Nov 4 00:30:05 2020 +1000 + + Moved regularizers from driver to model file + +commit 422632f99026e911b127d4dc9e2e18cb38089fdb +Author: Christopher Bailey +Date: Wed Nov 4 00:29:31 2020 +1000 + + Out of memory + +commit 4c7b00099ace947cd664b1d0a19c804237292291 +Author: Christopher Bailey +Date: Wed Nov 4 00:08:02 2020 +1000 + + ValueError: Shapes (128, 256, 192, 1) and (128, 164, 100, 1) are incompatible + +commit 34c4c915130ecdc411ce117afc952c5f0643390c +Author: yorkequ98 +Date: Tue Nov 3 22:07:09 2020 +0800 + + Imporved the styling of README.md + +commit 37738e02ba1d422b4c89ef9467e596ff30a5c23f +Author: yorkequ98 +Date: Tue Nov 3 22:05:14 2020 +0800 + + Added instructions to install the tensorflow package and to run the driver script to README.md. + Changed the naming of some classess. + +commit 29f8844a470c27c0e97ebd43143827aa017a8419 +Author: Raghav Dhanuka +Date: Wed Nov 4 00:04:04 2020 +1000 + + Renamed the file commit1.ipynb to Final_Project.ipynb + +commit 8c86143b34c92c75751549acdafcd76ba78913a3 +Author: Raghav Dhanuka +Date: Tue Nov 3 23:54:33 2020 +1000 + + Adding the main file as TEST script and also modified the commit1 file by creating different functions + +commit 9d3549dbf73eb5fef098393cebf84022376273a5 +Author: Christopher Bailey +Date: Tue Nov 3 23:46:12 2020 +1000 + + Batch size and other fixes + +commit fa955e365ca66b1896486527ed1a52d936440144 +Author: Joseph Menesch +Date: Tue Nov 3 23:26:41 2020 +1000 + + Changed residual blocks to pre-activation + +commit 38fd3fb98ecc3773329607a686141173b20c7366 +Author: PeterDinhNgo +Date: Tue Nov 3 23:21:17 2020 +1000 + + test script working + +commit f5697dbc11d599931a1e5d7c10a09d2533107900 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Tue Nov 3 23:17:27 2020 +1000 + + Created IUNet_sequence.py + + Custom sequence class for accessing data + +commit abd182e80a1f125941ac6acdc42ea1edd5c80ffa +Author: Declan Healey +Date: Tue Nov 3 23:16:36 2020 +1000 + + Added calculation of Dice similarity coefficient in model + +commit 7a0d8b75e44c010a1047748bc381efad478414b3 +Author: yorkequ98 +Date: Tue Nov 3 21:11:51 2020 +0800 + + Added plots and README.md + +commit d8ab33457f1ecce788033ee4b89a628e1ba8bff3 +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 21:00:33 2020 +0800 + + EADME.md update + +commit 0fb35347325c9d43af6f9b3da49e899f19f1e5cd +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 20:53:44 2020 +0800 + + png update + +commit b9c429501f41531177392768272d178675e4e247 +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 20:52:44 2020 +0800 + + Nothing + +commit c094309a62bcf8defa03cc1695c3d1b69c0bfcdb +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 20:47:02 2020 +0800 + + add img.png + +commit c8576230d97292d9dfc1306a3184f3aeb25a3888 +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 20:44:30 2020 +0800 + + README.md update + +commit d1ed89f62ca495036504c750bb074b80ae9f32cb +Author: yorkequ98 +Date: Tue Nov 3 20:38:14 2020 +0800 + + Plot the ssims and + +commit aecc55c6c7bb9d2ade4e048725c74b9dced6793a +Author: Xiao Sun +Date: Tue Nov 3 21:48:37 2020 +1000 + + Put code into UNet_model.py and a driver script, where we can run the driver.py file to directly call the training/testing of UNet_model and plot example input/ground_truth/predicted_mask image + +commit 7fb2be6f898002782edd5240033d8053c89e3ba2 +Author: yorkequ98 +Date: Tue Nov 3 19:44:16 2020 +0800 + + Separated the network definition code and the test code. + Added more documentation. + Deleted skimage package. + Using tf.image.ssim() to calculate ssim. + +commit ea0983af022a1ae72e9eead276e8735f8d4c625d +Author: Antoine Le +Date: Tue Nov 3 21:41:24 2020 +1000 + + remaking prediction method to display more predictions + +commit e7d4407550cd1bbe26bf3bbddbaf3744f63219a9 +Author: s4542006 <72848988+s4542006@users.noreply.github.com> +Date: Tue Nov 3 21:29:33 2020 +1000 + + couple of editing + +commit eb5784a1d926bf160eb4f933d3e94552b9ea71be +Author: Jie Deng +Date: Tue Nov 3 21:28:26 2020 +1000 + + Completed the README file and generated results for demonstration and visualization. + +commit ed9d634de06a508c94c3d8fd02b46dc86128a4cb +Author: s4542006 <72848988+s4542006@users.noreply.github.com> +Date: Tue Nov 3 21:27:32 2020 +1000 + + Update README.md + + couple of editing and the dependency paragraph was updated + +commit 81452b06a2b4e65e3e613544627b605d6d9bf0f3 +Author: Christopher Bailey +Date: Tue Nov 3 21:23:29 2020 +1000 + + Added crop and concat layers. + +commit fa40b7fc1330c186ff763918196fc7ba0a97fb31 +Author: s4542006 <72848988+s4542006@users.noreply.github.com> +Date: Tue Nov 3 21:17:20 2020 +1000 + + couple of images added to README.md file + + images include a learning curve, two sample images showing prediction vs ground truth and input images + +commit 97e9fda0fa2d0d78a594e402a13b365f2b714949 +Author: Jie Deng +Date: Tue Nov 3 21:17:02 2020 +1000 + + Completed the README file and generated results for demonstration and visualization. + +commit e3e8d34141293006e715b6761c99c71712b26243 +Author: Xiao Sun +Date: Tue Nov 3 21:10:59 2020 +1000 + + After 200 epochs, test DSC reaches 0.80, and imshow plot input/ground_truth/predict_mask + +commit 644500157e7e45392d49de279372dca6de1bafb3 +Author: Md Abdul Bari +Date: Tue Nov 3 21:01:44 2020 +1000 + + white space around the image was reduced for better look + +commit 382bd565b3722f9d6d6af62f320636a6bee076c8 +Author: Md Abdul Bari +Date: Tue Nov 3 20:39:15 2020 +1000 + + sample plots for to show predicted image comparing with ground truth and input images. + +commit c40ebdb1f7046c831604a09ad3dca5c4fcc6f03a +Author: Md Abdul Bari +Date: Tue Nov 3 20:37:41 2020 +1000 + + this curve shows how training and validation loss changes with increased number of epochs + +commit c1b3edcf799d44bdfebdd84878ae02d262d38eae +Author: Shobhan Mitra +Date: Tue Nov 3 20:35:41 2020 +1000 + + First code file + +commit e51ba988b91a78bed7b66db899f4d56f639ebb2a +Author: Md Abdul Bari +Date: Tue Nov 3 20:31:14 2020 +1000 + + A file created for part of testing the remote repositogy was deleted + +commit 254364e84c197e60f917a5693714bde53b390f08 +Merge: 075a7507 ac8a1f84 +Author: Md Abdul Bari +Date: Tue Nov 3 20:18:59 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/s4542006/PatternFlow into topic-recognition + +commit 2d65a51374fb5992eb5b385e222c176f19cf54a5 +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 18:16:49 2020 +0800 + + model.py update + +commit ac8a1f84009d44d13cbf693b843f2ba554cf857b +Author: s4542006 <72848988+s4542006@users.noreply.github.com> +Date: Tue Nov 3 20:15:25 2020 +1000 + + update README.md with text in remaining parts + + remaining parts, such as model compile, fit, performance evaluation and conclusion are added + +commit 075a7507ceebe7a8a5381bea1be026da2ea0b367 +Author: Md Abdul Bari +Date: Tue Nov 3 20:12:33 2020 +1000 + + this contains main function that outputs evaluation metrics, loss curve and sample images + +commit 10224ae163783642e1c3db9b869f1e9dee82a4cf +Author: Md Abdul Bari +Date: Tue Nov 3 20:09:09 2020 +1000 + + this module has four functions for training and evaluation of the UNet model, create plot of loss curve and sample plots of predicted image as well as input and ground truth images. + +commit e2c1d95551f3364f15653dd1f72f95c2ad4fc8a4 +Author: Declan Healey +Date: Tue Nov 3 19:48:56 2020 +1000 + + Fixed error with binary classification in model. + +commit 3e83c4b3d20414d44604145e492301959b8396a1 +Author: Xin-Qi <13851176890@163.com> +Date: Tue Nov 3 17:46:21 2020 +0800 + + Debug: Fix the plot function problem + +commit 55561de7a46c2ab915969b563074a13d4cf2be16 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Tue Nov 3 19:06:59 2020 +1000 + + Added captions to the images + +commit 250b4cac03d14a0dd941bc7bfc90de3c80d7d3d8 +Author: Xin-Qi <13851176890@163.com> +Date: Tue Nov 3 16:58:29 2020 +0800 + + Choose TASK4:ISIC dataset. Add two python files:model.py, driver.py + +commit 6abf4dbaa50704673cf248d502611a245b578747 +Author: Arushi Mahajan +Date: Tue Nov 3 18:52:46 2020 +1000 + + modified the code and added comments + +commit fb41d67f36e7fc08446ea3bba8045293006fb400 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Tue Nov 3 18:48:33 2020 +1000 + + Centered Images + +commit 0530f7c5b83bbe9ddd99a8086c075df2cede484b +Author: s4542006 <72848988+s4542006@users.noreply.github.com> +Date: Tue Nov 3 18:44:57 2020 +1000 + + Update README.md + + Introduction, data partition and network architecture parts were added + +commit 854e0d1b18ed43ad49be4e84248233078c004404 +Author: Wenjun Zhang +Date: Tue Nov 3 18:44:07 2020 +1000 + + fixed validation, accuracy to 0.85 + +commit 5ac4f81d69d46976d609a552c9b26d559d47b41b +Author: Shobhan Mitra +Date: Tue Nov 3 18:43:40 2020 +1000 + + Updated again README.md + +commit cdbfd32734bf5af605fa50f5af0d7dd5e1da9735 +Author: Shobhan +Date: Tue Nov 3 18:27:19 2020 +1000 + + Updated README.md file + +commit 4b7fc1be535866ca7fd49f3602c1d228846808ce +Author: Md Abdul Bari +Date: Tue Nov 3 18:17:01 2020 +1000 + + this module defines 3 functions to set UNet architecture + +commit 03783b997facd2bcc58d42e9bf30ea07b0397afd +Author: Xiao Sun +Date: Tue Nov 3 18:16:46 2020 +1000 + + Compare the result by using Adam with SGD optimizer, besides, create the draft version of README.md file + +commit aaf59adaade76df7a25dd5b75f63df425b17ebe1 +Author: Shobhan Mitra <52241389+smitraDA@users.noreply.github.com> +Date: Tue Nov 3 18:11:12 2020 +1000 + + Create README.md + +commit 101bfe7bb713147a2109c055778b563f18c5ed73 +Author: Raghav Dhanuka +Date: Tue Nov 3 17:54:22 2020 +1000 + + Added Logical Comments to the code + +commit 5081d279f8d3f4dacf403b808c36aee962f18282 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Tue Nov 3 17:49:00 2020 +1000 + + Update README.md + +commit a20172ed4161682a5d283856dbf35161a8d98fb7 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Tue Nov 3 17:44:11 2020 +1000 + + Update README.md + +commit 18f1f71468842f63f5170cc61436a17e8633bcae +Author: Zachary Oar +Date: Tue Nov 3 17:40:13 2020 +1000 + + Confirming the rename by deleting the old named files + +commit 382d0bb9837a4aafa3dc1c3fc11a4765778aa48f +Author: Zachary Oar +Date: Tue Nov 3 17:38:10 2020 +1000 + + Changed the name of my directory to match the problem being solved + +commit 37e633e02903852bce7552adaeb3005a0ace4b25 +Merge: 828517f9 cc760cb3 +Author: danielzhangau <740807262@qq.com> +Date: Tue Nov 3 17:29:09 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/danielzhangau/PatternFlow into topic-recognition + +commit 828517f949f206cf4cd5f09bb043514d25910c04 +Author: danielzhangau <740807262@qq.com> +Date: Tue Nov 3 17:29:03 2020 +1000 + + got dsc 0.9254 by improved unet + +commit 5dd4eb8416ef33a743b52f1a7f0a0a0286405976 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Tue Nov 3 17:22:28 2020 +1000 + + Import and split data + +commit 34a30a9c0d95d7947246fb4438262e5d91c1f134 +Author: Max Hornigold +Date: Tue Nov 3 17:14:44 2020 +1000 + + Added Final Images + + Added the final images to be used from my latest model. Updated the driver script. + +commit bf66078d946f12e1f5f1822ec37cd364521e0d40 +Author: Arushi Mahajan +Date: Tue Nov 3 17:12:08 2020 +1000 + + updating the minor changes in algorithm + +commit 9bed922739a2db270e735c3d636d2648565c1b7f +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 15:09:12 2020 +0800 + + Update model + +commit 50de69df14294960ab94754025d0a60a21efdd0e +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 15:05:10 2020 +0800 + + Update test-script + +commit 5f0c38f8c76a802025e0e27de109d71ea77a71c0 +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 15:03:57 2020 +0800 + + up4_ = tf.keras.layers.Conv2D(4, (1, 1), padding='same')(up4_) + up4_ = tf.keras.layers.LeakyReLU(0.01)(up4_) + +commit c39c83720ec53b7f725cf6bc4be0a8e427d1aaa4 +Author: Bin Lyu +Date: Tue Nov 3 16:53:52 2020 +1000 + + Update readme file + +commit 7b9918a01fac162f3dfb6503e2f486b68c970720 +Author: Bin Lyu +Date: Tue Nov 3 16:47:30 2020 +1000 + + Update readme.md. Mainly update result plots and format. + +commit 3b8d0ded2b925efb3c19c311bded667bc826a819 +Author: Arushi Mahajan +Date: Tue Nov 3 16:37:00 2020 +1000 + + Visualization + +commit 28bba8831a790adcc1e1717703b9abd143ec0d2e +Author: Bin Lyu +Date: Tue Nov 3 16:06:30 2020 +1000 + + removed wrong folder + +commit 17ba816f208ce023162c5c1d92ec1d2c9f861032 +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Tue Nov 3 15:51:04 2020 +1000 + + Create ISIC_segment.py + +commit 9e8e6d05e904c447027a6940459fa12609b1608e +Author: Bin Lyu +Date: Tue Nov 3 15:46:10 2020 +1000 + + move images into folder called "resources" and update readme.md file. + +commit b79530dd869b6937340aa2190fd7f5bda81ada9d +Author: Xiao Sun +Date: Tue Nov 3 15:28:44 2020 +1000 + + plot the predicted_mask image with 30 epoch training + +commit f1ed22f6f07f3bf69ee5e51fe4c99ab1d0400f08 +Author: ArunHarish +Date: Tue Nov 3 15:26:34 2020 +1000 + + Notebook generating some warnings. + +commit c5b31d4e76fa87d895c45d03d200d9f747e20fc5 +Author: Zachary Oar +Date: Tue Nov 3 15:26:18 2020 +1000 + + Fixed problem with image not showing on README on Github + +commit 7e05a1db0c67d0a27457774c0def835894801dce +Author: Zachary Oar +Date: Tue Nov 3 15:22:20 2020 +1000 + + Updated README with Improved UNet information, finalised files for the pull request + +commit a5e58f26327ad1e900de8134b5f4d8949db956ab +Author: Ganze ZHENG <1062168846@qq.com> +Date: Tue Nov 3 15:20:02 2020 +1000 + + Added loss and training functions. + +commit 0a03b5370acf9974afc5ef5ba0d2de8b0071a742 +Author: ArunHarish +Date: Tue Nov 3 15:13:42 2020 +1000 + + Trained them with 10 epoch and 4500 image dataset. + +commit c5e073b333e767bbbf4144891e1f011382755f92 +Author: Xiao Sun +Date: Tue Nov 3 14:35:01 2020 +1000 + + Implement UNet model module and script python fille and implot input/ground_truth/predicted image + +commit 8209a6e898d75dd7c47195c98ddc55b274ae1056 +Author: Arushi Mahajan +Date: Tue Nov 3 14:16:48 2020 +1000 + + Updating the model + +commit 87ed7f4e2a0a5adb5490907903e4777300f147f4 +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 12:14:16 2020 +0800 + + Add README.md + +commit 80bc68d9210a05fab749db3c69e69d7cc68db23c +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 12:13:25 2020 +0800 + + Update model.py + +commit 7cff1af1576db8bb49c887067e89d0a5b657cf03 +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 12:08:25 2020 +0800 + + Update test-script.py + +commit 3729dfc5c00d2f7402d70cc210417e8a60f05e41 +Author: Bin Lyu +Date: Tue Nov 3 14:06:33 2020 +1000 + + Update readme.md, add prediction result and plots. + +commit 60c9f910916ffb9b66ae87cf80c32beaa9fb732f +Author: Pragatheeswari Velraj +Date: Tue Nov 3 13:56:26 2020 +1000 + + Added Data-generater and working fine. + +commit 6b06f6dc0ceecfd81ca5a3a968a0989954198d11 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Tue Nov 3 13:52:18 2020 +1000 + + Updated Again + +commit 25437978c53e6aa553af53c853c92a592aca648a +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Tue Nov 3 13:46:32 2020 +1000 + + Updated. + +commit 6cd18cb54d93e69fa36cb88801c888774969bc2a +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 11:24:30 2020 +0800 + + Add test-script.py + +commit 48184964e37332c2a5fe7d50b5bf14bf5e7380ea +Author: Echozhe <13126592200@163.com> +Date: Tue Nov 3 11:16:23 2020 +0800 + + Add model.py + +commit 422860d4c95916d0794b19490d94bfecfd50bdb6 +Author: Raghav Dhanuka +Date: Tue Nov 3 13:15:25 2020 +1000 + + Code minor changes in the Unet Arch. + +commit cc760cb347647dadcbe859413263da7c52a70360 +Author: Bosheng Zhang (Daniel) <740807262@qq.com> +Date: Tue Nov 3 13:12:03 2020 +1000 + + Update README.md + +commit 1bed3d8e6ffdf1ae41e1e5ea816a2a97408ef026 +Author: Zachary Oar +Date: Tue Nov 3 12:46:55 2020 +1000 + + Added docstrings and comments to the updated model + +commit 51c0cba53cf1e7ccb6ac7f8fa6133987c1a2f3c1 +Author: Pragatheeswari Velraj +Date: Tue Nov 3 12:39:51 2020 +1000 + + Added file task-6, code-accessing the OASIS Dataset and display sample image + +commit 569a90c552f20291b0f8cf15e66cf827b0c0e909 +Author: Ganze ZHENG <1062168846@qq.com> +Date: Tue Nov 3 12:31:37 2020 +1000 + + Added discriminator network + +commit 5827a2f0a7c4a71fb19b1d25968f537554eb738f +Author: Bin Lyu +Date: Tue Nov 3 12:29:30 2020 +1000 + + Update readme.md, keep DCGAN and move improved Unet to the appendix. + +commit 9ca802c9f666d4b76a8dbd1f29d6f9ee057b5d87 +Author: Zachary Oar +Date: Tue Nov 3 12:22:20 2020 +1000 + + Added segementation layers to improved UNet, updated README example image to a new output + +commit a38d21370d96762762cf99d279d0bcde14979a4f +Author: Bin Lyu +Date: Tue Nov 3 12:20:21 2020 +1000 + + Seperate model defination functions to new file: Model_DCGAN.py + And call these functions in DCGAN_OAI.py + +commit dff074f1368f8b702c6d24825a9b1f9a40f3cee1 +Author: Arushi Mahajan +Date: Tue Nov 3 11:59:10 2020 +1000 + + Adding the model + +commit 902990eb46dbdb51889fcae5b08244a3303cd380 +Author: peterngo901 +Date: Tue Nov 3 11:49:37 2020 +1000 + + layers module working + +commit 9a00810c3cbbf16455601950a6c2ba55fdc32bfd +Author: Raghav Dhanuka +Date: Tue Nov 3 11:01:33 2020 +1000 + + Architecture defined for Unet + +commit 670993bc56bb343666f95a9245bc30c8cfcaf8f6 +Author: unknown +Date: Tue Nov 3 10:36:38 2020 +1000 + + read me added + +commit ef4be0aa87bc608d290ef62d9527fc9f087b111d +Author: unknown +Date: Tue Nov 3 10:35:50 2020 +1000 + + changed main name to driverscript + +commit bbb6c767276a879289c7c03b13a3e732f6ecadc8 +Author: unknown +Date: Tue Nov 3 10:33:35 2020 +1000 + + result plot and comments done + +commit a1032db27adc0e80b6caf3e941a84c648293d040 +Author: unknown +Date: Tue Nov 3 10:27:51 2020 +1000 + + increased epochs, fixed dice coef bug + +commit 7d3b89c0eeeeaae4cb9d1e38522c6a2a6eedaeed +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Tue Nov 3 09:41:46 2020 +1000 + + Added the Images + +commit 37c60928e623f50fa4eb5c3ce9868f8aa2870bfb +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Tue Nov 3 09:40:12 2020 +1000 + + Update README.md + +commit 8e0d17c3caccb9614e8d9ebda2755d80a863e8d9 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Tue Nov 3 09:39:01 2020 +1000 + + Update README.md + +commit 2978f6e43923262ff15f9c01ed98c3813fce3d83 +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Tue Nov 3 09:34:32 2020 +1000 + + Update README.md + +commit b36ef0e25640229bde219866986c5674f9da1aba +Author: Max Hornigold <37422010+maxhornigold@users.noreply.github.com> +Date: Tue Nov 3 09:14:55 2020 +1000 + + Update README.md + +commit 1520f6d1a3c28ec6bb09baf755beb1ec7b00ed08 +Author: Max Hornigold +Date: Tue Nov 3 09:08:51 2020 +1000 + + Added Saved Model and Results + + Added saved models and some images as results from training. + +commit f6507ecef3b0a0c8180ef11f3eb17d19dae5be4c +Author: Alexander Bayusuto Wanengkirtyo +Date: Tue Nov 3 00:59:36 2020 +1000 + + addded batch norm and dropout, still 0.85 + +commit 677c349af53fd4e74365914915a1f42d609e226b +Author: Matthew Costello +Date: Tue Nov 3 00:57:21 2020 +1000 + + Update README.md + +commit 1ed0bfa4e022427755fb7120b49bbcbd9129b7a1 +Author: Matthew Costello +Date: Tue Nov 3 00:51:40 2020 +1000 + + Initial README.md setup + +commit 93bee3e7bbc28fd6e277d886f9eacf73eaf459b0 +Author: Matthew Costello +Date: Tue Nov 3 00:42:19 2020 +1000 + + fixing wrong .gitignore edit 2 + +commit d4a12ad6f34281e4a2837e4814673ef606c78e4b +Author: Matthew Costello +Date: Tue Nov 3 00:38:22 2020 +1000 + + fixing wrong .gitignore edit + +commit 4ddabda5cf8b90642191fdbd035908558f26a092 +Author: Pattern Recognition <73750078+Echozhe@users.noreply.github.com> +Date: Mon Nov 2 22:29:21 2020 +0800 + + Delete Unet.py + +commit 0c5785a2dd1c4a695bdb652200fe4cc7d69b0014 +Author: Matthew Costello +Date: Tue Nov 3 00:28:03 2020 +1000 + + Added figure + completed test visual outputs + +commit 86e8a5ada9f54071eddb7a5c96715527de60cb40 +Author: Samuel Bethune +Date: Tue Nov 3 00:01:13 2020 +1000 + + model builds and trains as an improved UNet but does not seem to learn + +commit 66dfcb0152b30e16d04801c8e82596083cbe0a09 +Author: yorkequ98 +Date: Mon Nov 2 21:46:22 2020 +0800 + + Fine tuned the hyperparameters of the network + +commit 01239a5f90760e0b2e1b11b5aef8e3bcaf68608a +Author: Zhe Gong +Date: Mon Nov 2 23:12:24 2020 +1000 + + added Unet + +commit c8d0a184376a465ad3149c288a9af4b974d56184 +Author: Jie Deng +Date: Mon Nov 2 22:52:41 2020 +1000 + + Modified main.py as test driver script. + +commit 219fa16d5f802be8bb4f8b4b1c8501bfdceacac9 +Author: Samuel Bethune +Date: Mon Nov 2 22:27:59 2020 +1000 + + began adapting previous UNet architecture to new design; builds but segmentation layers not added + +commit d224172427e444274c7b5c383411225216b55222 +Author: Zachary Oar +Date: Mon Nov 2 22:25:15 2020 +1000 + + Updated base unet to improved unet, WITHOUT segmentation layers + +commit 7c50ece1622b5f5d75890eeeac773d6004a0d068 +Author: Arushi Mahajan +Date: Mon Nov 2 21:22:14 2020 +1000 + + Splitting the dataset + +commit 1018ced2b9a82acfffab7add986cc4bd78031dac +Author: peiran66 +Date: Mon Nov 2 21:09:18 2020 +1000 + + import model from model.py in main.py + +commit 283963876d104681d5491fbbad9efa82e13c7a3a +Author: Zhe Gong +Date: Mon Nov 2 20:59:24 2020 +1000 + + Initial commit of Unet test script.Mostly empty. + +commit 6194de1accaf1f1bb7b43bceca0d20d587dc1786 +Author: Bin Lyu +Date: Mon Nov 2 20:49:40 2020 +1000 + + Draft readme.md about two models (problem 1 with improvedUnet and problem 6 with OAI AKOA). + Add plot_model function to generate model visulisation and attached in appendix. + +commit a8c6643c78a5c2b3e5789d3e6aff1036119150ee +Author: Alexander Bayusuto Wanengkirtyo +Date: Mon Nov 2 20:48:55 2020 +1000 + + metric to dice, still at 0.8 + +commit 91743afeb07bd85cc871f3725c8df9c949d41e9e +Author: peiran66 +Date: Mon Nov 2 20:47:35 2020 +1000 + + I add code that contains all the model structure. + +commit 98d967f64f5035ba5baa26fd8a6ad0c0cb0414e7 +Author: peiran66 +Date: Mon Nov 2 20:44:41 2020 +1000 + + add a function to calculate dice coefficient. + +commit b045250debfde837866f5951784c84b62578d38b +Author: peiran66 +Date: Mon Nov 2 20:43:03 2020 +1000 + + add a function to add segmentation layers to model + +commit 7ae18450cbe06afdff7d5bc384d6e9db7435acc0 +Author: peiran66 +Date: Mon Nov 2 20:41:11 2020 +1000 + + add a context module function + +commit f96530efe1c8810e393332be54de3673a255824c +Author: peiran66 +Date: Mon Nov 2 20:33:05 2020 +1000 + + plot test images, masks and predict masks. + +commit de3057b9088a6051ab64c4f96327823bda3dfd83 +Author: peiran66 +Date: Mon Nov 2 20:30:22 2020 +1000 + + add function to plot accuracy and loss in the model + +commit 80d93d866687c1c39f85eb399babbc2654523bb7 +Author: peiran66 +Date: Mon Nov 2 20:15:20 2020 +1000 + + divide dataset into train, test and validation datasets. + +commit 482eb3107e5a5a6cc15a9e94e569f41933c36d88 +Author: peiran66 +Date: Mon Nov 2 20:04:55 2020 +1000 + + list images in folder. + +commit 41df409047e1b5cba3f47e4b46f672f57ad64074 +Author: peiran66 +Date: Mon Nov 2 19:56:15 2020 +1000 + + list images in folder + +commit e4cbd0702068699f86b5c19fdae4ee251dc223ea +Author: Samuel Bethune +Date: Mon Nov 2 19:49:44 2020 +1000 + + created OASIS_seg Jupyter notebook in which to build and test library for OASIS_seg.ipynb; created and visualised datasets from raw files + +commit d155bd0b296a48bff4e2a0fe2b13c077e008e11e +Author: peiran66 +Date: Mon Nov 2 19:42:13 2020 +1000 + + add a functon to list all the files in the folder. + +commit 06b971ff84809b3b3385b44c463f878d6d009265 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 18:54:53 2020 +1000 + + Moved parameter variables to the top of the script. + +commit b85c27161c44af54fb2ad307985a76231ab26b9e +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 18:54:13 2020 +1000 + + Corrections made to README.md + +commit 1876fd189f2ee1adc7e5e1d610342cc4ce7ab7b9 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 18:29:05 2020 +1000 + + Added some comments + +commit 33a8294610ab206867a047c80d48d4209136b571 +Merge: fa313cbe 41aa5c00 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 18:28:51 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/deliciousturtle/PatternFlow into topic-recognition + +commit 7371e99f6ba96a9e475a2df7537e314183c40ec9 +Author: Joseph Menesch +Date: Mon Nov 2 18:28:07 2020 +1000 + + Deleted old images + +commit 41aa5c005d781a779ce89117b71c6532dfb24eea +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 18:27:10 2020 +1000 + + Completed README.md + +commit bb4c40fed5901a9e53b238d45fa8126186731bab +Author: Joseph Menesch +Date: Mon Nov 2 18:22:33 2020 +1000 + + Added images + +commit 1c19d2b509c69850660a648e5c1899fec1f2086e +Author: Matthew Costello +Date: Mon Nov 2 18:15:11 2020 +1000 + + Improved model and visual output further + +commit af3aedb93262e89ad97d8890f1d1c0d7b2f721ca +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 17:41:21 2020 +1000 + + Update README.md + +commit 19fb4da82ccf0c8d9fd1a8d141cad470b57e6366 +Merge: 8ac41c20 ac4d4087 +Author: Shrikant Agrawal +Date: Mon Nov 2 17:38:50 2020 +1000 + + Updated readme.md + Merge branch 'topic-recognition' of https://github.com/agrawal-s/PatternFlow into topic-recognition + +commit dcd2923755e164d1cd531f0ed057181d2e4d0341 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 17:33:49 2020 +1000 + + Update README.md + +commit 8ac41c209e873a7417844a8084647fcec9bc98bb +Author: Shrikant Agrawal +Date: Mon Nov 2 17:33:02 2020 +1000 + + Updated Readme.md + + Added TF and keras module details. Added structure and mathodology of the project. + +commit 9f9cd7969d1e2867ee05ad3aad073fc130aa57ef +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 17:22:56 2020 +1000 + + Update README.md + +commit b505aa36ebc4619b89ca2bebcc056941811ba0b4 +Author: Ziyan +Date: Mon Nov 2 15:20:48 2020 +0800 + + Update readme.md + +commit fa313cbe1cb296d0179e87d6da2f3216ba17b409 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 17:09:00 2020 +1000 + + Added titles to plots + +commit 2a284c57b088734a95c7c472703ac68dc564c4ca +Merge: eba93520 b6d60606 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 16:59:56 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/deliciousturtle/PatternFlow into topic-recognition + +commit b6d60606413c32f502a199f87e62d1fb61a7efcd +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 16:59:07 2020 +1000 + + Update README.md + +commit eba935208020599c7bd52b5614fb530b56fb8550 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 16:58:32 2020 +1000 + + Updated plots + +commit a3a4bc5b4213f78b2bc258039b8f10f9853623de +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 16:50:21 2020 +1000 + + Update README.md + +commit b93fbe80ab2d7f6143e83eb525930be753da64c7 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 16:47:57 2020 +1000 + + Create README.md + +commit e1f6ab57bf250791b29b19c04c722fb78dfbebf4 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 16:45:26 2020 +1000 + + Added plots to used in README.md + +commit 608b479b442fd85bb88baa92982744339d6dd3c4 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Nov 2 16:39:52 2020 +1000 + + Cleaned up import list + +commit b8924fbfa186d4ef140b9ef13f17f6b0f29868dc +Author: Samuel Bethune +Date: Mon Nov 2 16:38:50 2020 +1000 + + created OASIS_seg folder, added README.md + +commit 0078d6d0b45b8cdd57c2113e5bb3b984eea902c3 +Author: Samuel Bethune +Date: Mon Nov 2 16:25:21 2020 +1000 + + added README.md explaining pull request folder layout + +commit 09b49ab783507cf3691c8c8f5425506fe79db464 +Author: Laotutu <39024821+Ruaman@users.noreply.github.com> +Date: Mon Nov 2 14:21:59 2020 +0800 + + Update README.md + + Add student number + +commit 11d3aab49865104f174d530d6e835d01d3f0f377 +Author: Zachary Oar +Date: Mon Nov 2 15:55:37 2020 +1000 + + Added references section to the README + +commit 1f8407e6b86779ea8e0a8f9aa2c328366c4e5bc4 +Author: Zachary Oar +Date: Mon Nov 2 15:31:57 2020 +1000 + + Finished usage section of README, added example segmentation image + +commit ac4d40877419cf91fbdff35b40250057239b2365 +Author: Shrikant Agrawal <49804643+agrawal-s@users.noreply.github.com> +Date: Mon Nov 2 15:30:58 2020 +1000 + + Update DC_GAN_Readme.md + +commit b9d5a6bac4dbf6d4c594d97be9418a2629bae357 +Author: Bin Lyu +Date: Mon Nov 2 15:28:53 2020 +1000 + + Complet DCGAN on google colab and saved here. + SSIM is just about 10%. + Need to be improved + +commit cb890d2d2e4c7d2b8e0c54c8f3e451183a434234 +Author: Shrikant Agrawal +Date: Mon Nov 2 15:26:19 2020 +1000 + + Added dependencies information to readme.md. + +commit 32913b30b07cbaa4c6e78a50c773cdfde1af6780 +Author: Siddharth Uniyal +Date: Mon Nov 2 15:12:47 2020 +1000 + + Changes in data preproessing + +commit a1ae13d1fd6b42e17904c18d73468b8f7eff9a89 +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Mon Nov 2 14:57:31 2020 +1000 + + rename the main.py + +commit 10d6dea27ae23e1480e5e308d5ae0a7a536f46f8 +Author: Dream Gonsalves +Date: Mon Nov 2 14:45:59 2020 +1000 + + Added test file to check upload in repo. + +commit f6e928238fe4011dcaf4be3254ca91e7a69105a2 +Author: Dream Gonsalves +Date: Mon Nov 2 14:28:52 2020 +1000 + + Added test file to check upload. + +commit d97c3e4c8215e2f6a7529862fa7ea7e2690fd606 +Author: Shrikant Agrawal +Date: Mon Nov 2 13:02:38 2020 +1000 + + Added test file. + + Added test file to check if upload is working correctly. + +commit 3b79958544224ac6b21da58b79ac7878b054849d +Author: Ganze ZHENG <1062168846@qq.com> +Date: Mon Nov 2 12:36:48 2020 +1000 + + Added generator network. + +commit 455d451dea63b5117ac04af5661f6481e8aa5e56 +Author: Arushi Mahajan +Date: Mon Nov 2 12:34:48 2020 +1000 + + Changes in readme + +commit 064b14a8fd2bba81e58249fe7934eb3b944255a7 +Author: Arushi Mahajan +Date: Mon Nov 2 12:25:35 2020 +1000 + + loading the dataset + +commit 889c9441b5d25d0796f11a12dae4d8396f78361c +Author: Raghav Dhanuka +Date: Mon Nov 2 12:17:05 2020 +1000 + + adding the script for data preprocessing + +commit 40ab9435ab5a192659f053211014bcf1b4b4102b +Author: Raghav Dhanuka +Date: Mon Nov 2 12:04:07 2020 +1000 + + Preproceing dataset completed + +commit b2c62f8016a1fe14dfd77c294b488695bcf30272 +Author: Bin Lyu +Date: Mon Nov 2 11:52:14 2020 +1000 + + Build DCGAN model on OAI dataset + +commit 4e310648598940e28e2e258c577ac3e56d84ba5d +Author: Joseph Menesch +Date: Mon Nov 2 11:46:37 2020 +1000 + + Updated readme + +commit fbb0db3e21bf0e02e1c05ec5d2b290eb7c321fc4 +Author: Joseph Menesch +Date: Mon Nov 2 10:23:55 2020 +1000 + + Updated readme + +commit 9c90877bd287f3de1365adc93fb1923076bbf582 +Author: Theo Duval +Date: Mon Nov 2 09:33:05 2020 +1000 + + Updated directory name, image name, and readme as needed + +commit 35ecc49815701561c3a7143041c912c9d0b16a73 +Author: Kareem Kharoub +Date: Mon Nov 2 08:48:12 2020 +1000 + + updated dice coefficient methods + +commit 0731f501403997d9a97b627a29a611f9f3f4b107 +Author: Theo Duval +Date: Mon Nov 2 07:35:34 2020 +1000 + + Small updates to comments + +commit 56c61effe37d36f886163ac5f3973013568ad3f8 +Author: Ziyan +Date: Mon Nov 2 02:45:08 2020 +0800 + + Finish + +commit 5444684e0f6428582b3a6d6a0fd29630c8855cf3 +Author: Ziyan +Date: Mon Nov 2 02:44:12 2020 +0800 + + Finish + +commit 6ff3575cbb02e8ed1b9abfa687d39b2a3e8b6f71 +Author: Ziyan +Date: Mon Nov 2 02:33:13 2020 +0800 + + Finish + +commit c867948c771d6b8d405cbc787d115a3461e45503 +Author: Ziyan +Date: Mon Nov 2 01:33:48 2020 +0800 + + Documentation work, result presentation, remove unnecessary files. + +commit badb57cbbafc82de80fb1351d2cd14ee418d9283 +Author: Pattern Recognition <73750078+Echozhe@users.noreply.github.com> +Date: Mon Nov 2 00:47:36 2020 +0800 + + Create Model + +commit be0fbe194ad96363c4e845733522540b87c5a8d7 +Author: Dhilan Singh +Date: Mon Nov 2 02:04:44 2020 +1000 + + Initial commit of unet improved oasis brain segmentation, mostly empty + +commit 93fcee78300e1bcef57ac6bbffc3eb3fb5ffa326 +Author: Lei Wang +Date: Sun Nov 1 23:31:44 2020 +1000 + + change result picture + +commit ec9b4e1445d8aff2cde4244c8f5aa73d693db6df +Author: Lei Wang +Date: Sun Nov 1 23:25:55 2020 +1000 + + change result pictures + +commit 1f4d3c8210c992798f513a3fe8511061efee1cd8 +Author: Lei Wang +Date: Sun Nov 1 23:23:36 2020 +1000 + + change result pictures + +commit 0500e63f3f9c7b5cc927bc0b7b0a013f57203cf4 +Author: Kareem Kharoub +Date: Sun Nov 1 23:20:42 2020 +1000 + + change upsample to bilateral, updated DCS calc, added DCS as metric, updated training plot + +commit a63c3527f66001073aeefeef9757a28f8723f67f +Author: Lei Wang +Date: Sun Nov 1 23:08:52 2020 +1000 + + change result picture + +commit 009b44c0f7b9fb643af949e6c4eb572de388e322 +Author: Lei Wang +Date: Sun Nov 1 23:05:45 2020 +1000 + + change the result picture + +commit ccf85fbe693d3ece05545c32a1c17509fa43d29b +Author: Pragatheeswari Velraj +Date: Sun Nov 1 22:28:02 2020 +1000 + + Add data_gen working fine + +commit d3a433c75f6d906aa359d26209781c3861db874f +Author: Morgan Nierfeld +Date: Sun Nov 1 22:24:45 2020 +1000 + + Completed commenting for functions, now need to just confirm that the model still works and clean up any code or documentation. Possibly add comments to the improved_unet function. + +commit 50b891df260f56dcbd2cff8266311eb2a2736099 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Sun Nov 1 21:53:56 2020 +1000 + + Driver script callable from cmd line with data directory as argument. + +commit 20567b94088b8464a12ccfe0b5d052fba48914ec +Author: Morgan Nierfeld +Date: Sun Nov 1 21:34:21 2020 +1000 + + This is the working verison used for the final result of a DSC around 0.8. Base filters: 4, Epochs: 50 + +commit 39c83d5d3c19f85203600018f56aff9d2e321ccd +Author: Theo Duval +Date: Sun Nov 1 21:17:42 2020 +1000 + + Updated the readme with some typo fixes + +commit ea0fecfa8e68b3275ecc978f48a6433c9efd0964 +Author: Shrikant Agrawal +Date: Sun Nov 1 20:50:01 2020 +1000 + + Added Gen - Desc modules with train functions. + +commit 9a930c10a25d4afcc754d81e3be462cc44285abf +Author: Ganze ZHENG <1062168846@qq.com> +Date: Sun Nov 1 20:48:50 2020 +1000 + + Completed loading OASIS dataset. + +commit 5bb5912c7e9f7fa186fe3751613b19bac3263153 +Author: Theo Duval +Date: Sun Nov 1 20:37:13 2020 +1000 + + Added some samples from training, updated readme appropriately + +commit 658b48832332c834e325958c4d805e9d58dac8f4 +Author: Jie Deng +Date: Sun Nov 1 20:30:32 2020 +1000 + + Modified main.py and added eval.py. Trained new model from non-segmented(raw) OASIS brain dataset. + +commit 41d22b26c8361d626a0bd514811da5aa5212b922 +Author: Shrikant Agrawal +Date: Sun Nov 1 20:27:32 2020 +1000 + + Modified image helper. Added image loader to notebook. + +commit 9fe77540778602dd7b6bb96adae3d3fffb6bde13 +Author: Pragatheeswari Velraj +Date: Sun Nov 1 20:26:10 2020 +1000 + + Added Test.py file. + +commit e43a197372ea03d5bc2191680c15ba6566ef2a0e +Author: Md Abdul Bari +Date: Sun Nov 1 20:18:05 2020 +1000 + + data_part_normal() function of the module was modified and more comments were added + +commit 9a21d5ba11caccec252f9aeb6f6daf9880439ca6 +Author: Shrikant Agrawal +Date: Sun Nov 1 20:07:57 2020 +1000 + + Adding new file for reset. + + No significant progress is observed with respect to improvement of the model. it seems that something moght be wrong with the data load and generator. tring to recreate the notebook using different network. + +commit 7cea44f6e6cc48bb3ed46bc9979eb07ca56805f2 +Author: Zachary Oar +Date: Sun Nov 1 18:28:36 2020 +1000 + + Added usage section to README, changed result plotting in driver script + +commit 02d3b79e7fb9bf33d7b193873e4e3fde80ac4d99 +Author: Lei Wang +Date: Sun Nov 1 18:28:25 2020 +1000 + + final update + +commit 96add40b38d2907e0885a28021cf3baf6e8ccc31 +Author: Lei Wang +Date: Sun Nov 1 18:23:34 2020 +1000 + + update readme pictures ssim + +commit d497fd8759e25863b069354d69519edd9c1d1a85 +Author: Lei Wang +Date: Sun Nov 1 18:19:00 2020 +1000 + + update readme pictures + +commit a5d30a093931049237cc10b5e9a870bb6d7505f6 +Author: Lei Wang +Date: Sun Nov 1 18:12:14 2020 +1000 + + update model + +commit 04a0a6256bbbb3f72e8125a2f8c74d79e3bc9b7f +Author: Lei Wang +Date: Sun Nov 1 18:06:39 2020 +1000 + + README file update + +commit 6b3255a73d79a3c5b2ed0e4b5b24659702e74a0a +Author: Lei Wang +Date: Sun Nov 1 17:56:48 2020 +1000 + + test4 + +commit cf2bdd2ba7974dfea83f22af4ab53ffa8b8b5c66 +Author: Lei Wang +Date: Sun Nov 1 17:11:40 2020 +1000 + + test4 + +commit 2ee510cdca229cf3d69a64690f5fe42131174606 +Author: Lei Wang +Date: Sun Nov 1 17:08:35 2020 +1000 + + test3 + +commit 9c8866e56ffb263b3e3bf410e15883f8e2aa79a4 +Author: Lei Wang +Date: Sun Nov 1 17:02:32 2020 +1000 + + test2 + +commit 5c671da0285dde9d2b6618701fa8e2091a7fc1bd +Author: matt-jones27 <45220137+matt-jones27@users.noreply.github.com> +Date: Sun Nov 1 16:48:50 2020 +1000 + + Create README.md and folder structure + +commit 13e8a4f57e24a778ace418e9ce8d4998120ca486 +Author: Lei Wang +Date: Sun Nov 1 16:42:29 2020 +1000 + + test1 + +commit d96912f459cadb2e5b19eff529072c3e721f76df +Author: Lei Wang +Date: Sun Nov 1 16:35:32 2020 +1000 + + change the display of picstures + +commit 06af265e149194c116d56fb773f3b3906f1ddd42 +Author: Lei Wang +Date: Sun Nov 1 16:28:05 2020 +1000 + + Edit readme + +commit 26f5e2f1b809581c045f5b6f5e30d0ff418c709d +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Sun Nov 1 15:40:35 2020 +1000 + + Split code into CNN module and driver script + +commit bf011a17c18e0bb1f6e53244814a417c7bf7b88c +Author: Bin Lyu +Date: Sun Nov 1 15:23:02 2020 +1000 + + Add some comments + +commit ad9beed32a03fa9a472ea1ec4d8acea862b0ab99 +Author: Bin Lyu +Date: Sun Nov 1 14:58:40 2020 +1000 + + Improve the code and complete comments + +commit 0ba81b69ae8db2be50ad4653872d5d0b56b36068 +Author: Bin Lyu +Date: Sun Nov 1 14:40:47 2020 +1000 + + Develop the improved Unet model and calculate dice similarity coefficient + +commit 18d7c70fa0c647b1cd64dc0e9014072c10d422bd +Author: Shrikant Agrawal +Date: Sun Nov 1 14:27:57 2020 +1000 + + Added further center alignments. + +commit d206ab8dc6efc61be1df305aaa9fa4679c3ad69e +Author: Shrikant Agrawal +Date: Sun Nov 1 14:23:00 2020 +1000 + + Added center alignment. + +commit b41d6fdf5884fe2eaa4bb7d8427402b7ccb5b2ab +Author: Shrikant Agrawal +Date: Sun Nov 1 14:19:42 2020 +1000 + + Added test MD file from jupyter notebook. + +commit 19bf907673e662dc9a4052ce588d85656c80c952 +Author: Shrikant Agrawal +Date: Sun Nov 1 14:17:40 2020 +1000 + + Added working notes to readme file. + +commit 5f6d70b5f9d56cc7c3aef290d04163d8873b72ab +Merge: e5518e14 8b7dc165 +Author: Shrikant Agrawal +Date: Sun Nov 1 14:13:44 2020 +1000 + + Adding files from remote to local. + Merge branch 'topic-recognition' of https://github.com/agrawal-s/PatternFlow into topic-recognitionia + +commit 8b7dc165f080d50bd6b0014d6c1120ef066bdbfd +Author: Shrikant Agrawal <49804643+agrawal-s@users.noreply.github.com> +Date: Sun Nov 1 14:05:20 2020 +1000 + + Added screenshot of Brain image data + + Added screenshot of OASIS-brain image data from the training set. + +commit 3dfa9bf650a90e1deacef08906ae1ed3c605216f +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Sun Nov 1 13:48:55 2020 +1000 + + Added comments + +commit 8d9bf9160fea7019ed3ddfa5bb89cd00679041a4 +Author: Shrikant Agrawal <49804643+agrawal-s@users.noreply.github.com> +Date: Sun Nov 1 13:48:00 2020 +1000 + + Added gif file for GAN training on MNIST. + + https://towardsdatascience.com/implementing-deep-convolutional-generative-adversarial-networks-dcgan-573df2b63c0d + +commit c5acb7b7d0d49650ac771d086b20fd2597957c44 +Author: Shrikant Agrawal <49804643+agrawal-s@users.noreply.github.com> +Date: Sun Nov 1 13:42:35 2020 +1000 + + added architecture for GAN + + https://gluon.mxnet.io/chapter14_generative-adversarial-networks/dcgan.html + +commit e5518e143d4a9e32e654725619d1c3dcaef45506 +Author: Shrikant Agrawal +Date: Sun Nov 1 13:36:20 2020 +1000 + + Added hyerlinks to original paper and the images + +commit f0c3c0667bd01620b9cc0a35d8a548d8ac0ae1ee +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Sun Nov 1 13:31:02 2020 +1000 + + Tweaked dataset split ratios. + +commit c0bee3d56d9b1f54a2a579877531cdb26f4b969c +Author: Shrikant Agrawal +Date: Sun Nov 1 13:18:01 2020 +1000 + + Added introduction and basic application images of GAN + + Added images from thispersondoesnotexist.com as the best working example for GAN + +commit f6918b5c795aa9743703787f203475a8db9638d3 +Author: Zachary Oar +Date: Sun Nov 1 13:12:31 2020 +1000 + + Added dependencies section to README, updated driver script to handle license and attribution files + +commit 0e25e19472bb0ee263cac91fd80a4f74fc66292b +Author: MajorRedux +Date: Sun Nov 1 14:04:13 2020 +1100 + + Testing adam-relu-glorot_uniform - doesn't work well + +commit 0aec5a7fc935d1ebe9d4c60e3bedf11cf022869f +Author: Shrikant Agrawal +Date: Sun Nov 1 12:45:41 2020 +1000 + + Added readme.md file for the project. + + Started the readme file for the project. will keep on updating stuff here. + +commit 93f836e8448bce4b839077ed9012626e9aaa4958 +Author: Erik Brand +Date: Sun Nov 1 12:08:45 2020 +1000 + + Renamed Parent Folder + +commit fc07e034a8ad8ca44db9452a39f90f4df61313ae +Author: Erik Brand +Date: Sun Nov 1 11:58:32 2020 +1000 + + Added Debug flag to training method, more documentation + +commit 58db1c4574efffc0d90d7a9418ea18abc5408ac6 +Author: Erik Brand +Date: Sun Nov 1 10:53:47 2020 +1000 + + Further Documentation + +commit fbb62a2d21e0f3198601ae3f31119c0b8c0b70ae +Author: Nic Thompson +Date: Sun Nov 1 09:15:54 2020 +1000 + + Added final epoch 256x256 images to readme + +commit fdea355bbf466f4d31bb0dcef216b34db113e0fb +Author: Nic Thompson +Date: Thu Oct 29 21:03:51 2020 +1000 + + Removed data files + +commit 08b877a0381812b5ed6393ae2c686be5449901f7 +Author: Nic Thompson +Date: Thu Oct 29 19:47:39 2020 +1000 + + Final revisions, updated readme pdf, set driver to deafult 28 + +commit 75c8ab50b45d899abedb0f787b84f23fff074f42 +Author: Nic Thompson +Date: Thu Oct 29 19:21:14 2020 +1000 + + Made readme into a pdf, updated file headers + +commit 5a2e0619f6bd5adc38ab91e0d0383456841dd021 +Author: Nic Thompson +Date: Thu Oct 29 17:56:36 2020 +1000 + + Updated readme, file docstring headers, removed checkpoints + +commit 02a9edfd0b2ea5c41f7bc511b60b6b2a7874c4df +Author: Nic Thompson +Date: Tue Oct 27 14:37:29 2020 +1000 + + Removed data helper, started README + +commit e25a143d6c5c3d7abe293658e3bb538ee1fc2cce +Author: Nic Thompson +Date: Sun Oct 25 14:46:08 2020 +1000 + + Reformated model choice to driver + +commit cbc4bf68ba16faf07b68195f32bb3d23324fd348 +Author: Nic Thompson +Date: Sat Oct 24 13:04:38 2020 +1000 + + Added new model parameters for 256 model + +commit c8264a2399bd4f9741f10be8fbd2d04024ab97d4 +Author: Nic Thompson +Date: Thu Oct 22 15:47:54 2020 +1000 + + Added 256 model, split driver files + +commit b631da43312841d4c56792ea90d9a655c6b81306 +Author: Nic Thompson +Date: Wed Oct 21 21:51:35 2020 +1000 + + Added comments, included ssim calc + +commit 11b67b72939eedbb92a961ec27c50487ea4344be +Author: Nic Thompson +Date: Wed Oct 21 07:08:08 2020 +1000 + + Minor changes to structure + +commit 528a5cb1525778bc8543076e18cbedadafcac268 +Author: Nic Thompson +Date: Tue Oct 20 07:15:55 2020 +1000 + + Created 64x64 model + +commit 472cf3eb8dc1db286fe646fb0b6288ead113a4ad +Author: Nic Thompson +Date: Mon Oct 19 17:59:50 2020 +1000 + + Fixed checkpoints, moved to tf functional api + +commit 621d29ae4085008e81d3f0ebb078daf14abe412c +Author: Nic Thompson +Date: Mon Oct 19 07:59:06 2020 +1000 + + Normalised images + +commit 4df293e549587bba53082a90e9733fe930eebb6c +Author: Nic Thompson +Date: Sat Oct 17 21:50:35 2020 +1000 + + Added tests, ran basic training + +commit 2c8c6ac652b101d8a483a3e27f588dea0c999dd2 +Author: Nic Thompson +Date: Sat Oct 17 19:34:47 2020 +1000 + + Model now training, implement saved checkpoints: + +commit c86afcd9bd795134b7eb868ccaa49c96d6f08b16 +Author: Nic Thompson +Date: Sat Oct 17 16:30:29 2020 +1000 + + Built main framework for model training + +commit c1c8d47e9327488631c8053463c0717af9546238 +Author: Nic Thompson +Date: Sat Oct 17 15:34:37 2020 +1000 + + Added the data files, script for parsing raw data + +commit 3a06a51d586e522242b890b37f266683eb6963e8 +Author: Nic Thompson +Date: Sat Oct 17 13:10:50 2020 +1000 + + Created initial files for project + +commit 76ad155a4cf8768f3628b3a6749cd890a6e662a9 +Author: Ziyan +Date: Sun Nov 1 01:43:06 2020 +0800 + + After communication with tutor, redesign the experiments, model structure (more flexible with different size of outputs) part of documantation work. + +commit fbaa60067835389c237ea301b3d8a5079f27ac40 +Author: Jie Deng +Date: Sun Nov 1 03:40:05 2020 +1000 + + Complete a DCGAN generative model of the OASIS brain dataset. AddiCng 5 .py files. + +commit 7b5fa88d02c4f42b371dd45070926bf4bec9f7c7 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Sun Nov 1 01:30:00 2020 +1000 + + Split on patients to avoid data leak between sets + +commit 3b874bbc014523dc31444050421fdadac0f9a1ff +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Sun Nov 1 00:29:53 2020 +1000 + + Updated code to use subclasses for layers/model + +commit 28abf351e725f30c4e9277a6275e4a4fa6ec6e3a +Author: Reece Jocumsen +Date: Sat Oct 31 23:35:40 2020 +1000 + + Removed 2DMaxPooling layers from discriminator and replaced them with strides. + +commit 2a69e3497d2239332d322fdcb8e094e6d477f1f4 +Author: yorkequ98 +Date: Sat Oct 31 21:12:32 2020 +0800 + + Refined the dataset loading and image normalisation functions. + Added some documentation. + +commit dbbf0ccdab8478a504335f9e8ab359924942e38a +Author: Arushi Mahajan +Date: Sat Oct 31 23:04:20 2020 +1000 + + Read file - topic name + +commit 5a51a48110e03067b1f6e81d755acc1da7de9782 +Author: Raghav Dhanuka +Date: Sat Oct 31 23:04:12 2020 +1000 + + Topic selected + +commit 938ff1b211355a340f55865cf029959f2e8ebc5e +Author: Kareem Kharoub +Date: Sat Oct 31 23:00:23 2020 +1000 + + updated documentation + +commit 184769c546295e767efef6a4b747128d15917edc +Author: Kareem Kharoub +Date: Sat Oct 31 22:57:48 2020 +1000 + + first draft of documentation and test script include output data + +commit 1e01013b3ae651462d064abaec8fb3b8774bbf9f +Author: arushi-mah <73738016+arushi-mah@users.noreply.github.com> +Date: Sat Oct 31 22:56:44 2020 +1000 + + Create Readme.md + +commit 7833fb8bf1fdc6bf9a6e98c5d1ebfde2ef079977 +Author: Raghav Dhanuka +Date: Sat Oct 31 22:17:27 2020 +1000 + + Adding Readme.md edited + +commit 3ce9aef68158af6d571994add2e5382e908cbd17 +Author: Raghav-Dhanuka <73738013+Raghav-Dhanuka@users.noreply.github.com> +Date: Sat Oct 31 22:03:08 2020 +1000 + + Create Readme.md + +commit 1dca71a7e0ad5edaa6c3a677619d75b0351d5fa1 +Author: Kareem Kharoub +Date: Sat Oct 31 20:14:17 2020 +1000 + + creating seperate test script + +commit 4fa03da4adb88469376cd1fe8e4212f46941cd7e +Author: Kareem Kharoub +Date: Sat Oct 31 20:12:39 2020 +1000 + + created test script in seperate file and added script to display model output + +commit 7aa77ac48e978235141550587a138f96705b4f93 +Author: Md Abdul Bari +Date: Sat Oct 31 19:36:48 2020 +1000 + + this module has three functions defining the unet architechture to be used for the eventual image segmentation + +commit c09c8a32596136e194545c245a6004098e6a9b7e +Author: Md Abdul Bari +Date: Sat Oct 31 19:34:12 2020 +1000 + + A new function is added to split data set into trian-test-validation set + +commit 71aa6e5fe756bdde057e2af3f46f671be39e0a09 +Author: Kareem Kharoub +Date: Sat Oct 31 19:33:02 2020 +1000 + + updated test script with early stop call backs and function to save and load model weights + +commit 03614a13f59e03b07b853ef14bc5b9c3b7c3f666 +Author: Kareem Kharoub +Date: Sat Oct 31 19:22:25 2020 +1000 + + completed and validated testing script + +commit 3536e2096229372a4925dce1740ef245cc93002f +Author: Bin Lyu +Date: Sat Oct 31 19:18:42 2020 +1000 + + Initial commit for simple task1. Data processing and image display. + +commit 64968605772d29249bf30f54d3f126ecacb9a61e +Author: Lei Wang +Date: Sat Oct 31 19:08:41 2020 +1000 + + test format + +commit bcf936b648fc664cb94313eedfc1dadadeb0e0f4 +Author: Lei Wang +Date: Sat Oct 31 18:59:41 2020 +1000 + + check format + +commit e6398d5363260f72db889cb1e9a0c3a515560705 +Author: Lei Wang +Date: Sat Oct 31 18:58:35 2020 +1000 + + More pictures + +commit 0d15c8cf26115ee9eebe0101e4670926523a5926 +Author: unknown +Date: Sat Oct 31 18:46:17 2020 +1000 + + model implementation edited + +commit b38118f31b33b5038e02a218373f847815af527d +Author: Kareem Kharoub +Date: Sat Oct 31 18:45:34 2020 +1000 + + developed image loading part of test script + +commit 3c5295877ff68f70e4ad1f4cde39f05d7b179200 +Author: unknown +Date: Sat Oct 31 18:44:36 2020 +1000 + + model trianing and compilation done + +commit 159f363ad03d866b7aa6961f4cbd1f49f35d0c9c +Author: Lei Wang +Date: Sat Oct 31 18:38:38 2020 +1000 + + update code and two more pictures + +commit 45c95dba592aefa778a0b25c621e4e4539fa14f8 +Author: Bosheng Zhang (Daniel) <740807262@qq.com> +Date: Sat Oct 31 18:00:24 2020 +1000 + + Update README.md + +commit 8875444d2f559e9235bb2fd2075a6c1af7fccf23 +Author: Erik Brand +Date: Sat Oct 31 17:59:27 2020 +1000 + + Added Documentation and Final Tweaks + +commit 86a37b33a858a13ae5c246f623ff9d308c47b8cc +Author: Kareem Kharoub +Date: Sat Oct 31 17:57:22 2020 +1000 + + improved unet implemented + +commit dd9ee1df60d0ccc3fc6729f6b22da1789498ad52 +Author: Matthew Costello +Date: Sat Oct 31 17:52:07 2020 +1000 + + Improving output + +commit 581ca9b9d7564640b88bb17af53159b407a8267c +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Sat Oct 31 15:15:21 2020 +0800 + + Update README.md + + update descriptions and results + +commit 46cd890b33e6b9d9b9a99f33d32b3d3144f3b758 +Author: Lei Wang +Date: Sat Oct 31 17:03:08 2020 +1000 + + change images + +commit f1312f8caf4c442af87ee5ecadb652d785ca419a +Author: Lei Wang +Date: Sat Oct 31 17:01:10 2020 +1000 + + change pictures + +commit 99a06e99e93e3a1211a5abf811cf76f5a896732f +Author: Lei Wang +Date: Sat Oct 31 16:59:38 2020 +1000 + + add pictures + +commit a141704eedb04f58de534f7fd4946f1d9d757d86 +Author: Lei Wang +Date: Sat Oct 31 16:56:09 2020 +1000 + + add generator sturcture picture + +commit 4367ce6fd199ac4f7d3bb7d33eb50f1051dc27b0 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Sat Oct 31 14:54:55 2020 +0800 + + upload the results of split dataset + +commit abdfc8401efa6f0258ef45d8e0b1c701be8fc1a0 +Author: Kareem Kharoub +Date: Sat Oct 31 16:37:22 2020 +1000 + + includes data load and processing methods + +commit 7434c32f8f2842b96ebb3aa34c79e79664ec54e5 +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Sat Oct 31 16:35:42 2020 +1000 + + cancel latex context since github markdown cannot read it. + +commit 7927e14139d8bccc7fad09d2cbc7b74fad0c2c05 +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Sat Oct 31 16:31:59 2020 +1000 + + modify README.md to fit github markdown + +commit 80ec54e5698ff12d50faa3b85c9a5567eb9003b1 +Author: Zachary Oar +Date: Sat Oct 31 16:17:11 2020 +1000 + + Added and began work on README file, started adding images for the README + +commit 7756b6f9cbcf4bf5a84f11b55549b2f1acf9fa25 +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Sat Oct 31 16:10:49 2020 +1000 + + Correct the error on model.py + modify the number of output filters in segmentation layers to 1. + +commit e8ca8ef8125e4344f33cdf7789b1015e74f44b7a +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Sat Oct 31 16:07:45 2020 +1000 + + Keep modifying README.file and some comments on code. + +commit 27e86f544b0bf15bb13096e9945d0023ac5c8b2d +Author: Lei Wang +Date: Sat Oct 31 15:59:52 2020 +1000 + + Add flowchart of DCGAN + +commit 08071d2904a93ddc8941cf5eb4e863552e7ea6c8 +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Sat Oct 31 15:50:55 2020 +1000 + + Add visualization for wrong ground truth images. + +commit 734ad673fe657781dfc85702a730c664267c6a28 +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Sat Oct 31 15:49:28 2020 +1000 + + Rewrite the ISICs_Unet.py file. + Modifile some wrong and add inversing image and evalution steps. + +commit f3eacde679248025e5c57de3b8c83323b61dc28f +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Sat Oct 31 15:40:23 2020 +1000 + + README.File + Add the image segmentation after inversing to the original size + +commit 03ec2be387266defe8606032e17e5e000d7ecbd8 +Author: Dattatreya Majumdar +Date: Sat Oct 31 15:37:50 2020 +1000 + + Final README.md + +commit 5ba0c477b1d41c7c6791a0efd200fbfb84e438af +Author: Dattatreya Majumdar +Date: Sat Oct 31 15:34:07 2020 +1000 + + Code Execution Snippet + +commit d5f29855b0a73b55d1479df0cc109e52253fcab4 +Author: Dattatreya Majumdar +Date: Sat Oct 31 15:23:04 2020 +1000 + + README.md Updated + +commit 716582f49d81e050275b1c104913afe03941246b +Author: Lei Wang +Date: Sat Oct 31 15:22:49 2020 +1000 + + Description change 2 + +commit 9888d70bb57c11038f01aab57259f077a2033787 +Author: Lei Wang +Date: Sat Oct 31 15:13:36 2020 +1000 + + Description change + +commit ef1f6d7b15baf4653a574f9932d70043f88e7315 +Author: Dattatreya Majumdar +Date: Sat Oct 31 14:49:22 2020 +1000 + + Dice Loss Plots + +commit c4ed8fdc6012bfbb2e239669981fbb374332b2e5 +Author: Dattatreya Majumdar +Date: Sat Oct 31 14:47:30 2020 +1000 + + Accuracy Plots + +commit cc7af51b12fa25074fd9fad60df3786942729f71 +Author: Lei Wang +Date: Sat Oct 31 14:44:33 2020 +1000 + + Explananation of DCGAN + +commit 1a9e4ec74fe64dbad412f8a8cfe6a3828c6e96f5 +Author: Dattatreya Majumdar +Date: Sat Oct 31 14:41:07 2020 +1000 + + Revert "Dice Loss Plots" + + This reverts commit cd991303ee3c2372efe7809e4aef720e1ae0bc44. + +commit cd991303ee3c2372efe7809e4aef720e1ae0bc44 +Author: Dattatreya Majumdar +Date: Sat Oct 31 14:32:58 2020 +1000 + + Dice Loss Plots + +commit 46065f3475311e1182e67f8dfc3eb6791828c25c +Author: Dattatreya Majumdar +Date: Sat Oct 31 14:28:48 2020 +1000 + + Updated Dice Coefficients Matrix + +commit a0529e5ad8dd66c872976ecbe9130379df2f9f5c +Author: Lei Wang +Date: Sat Oct 31 14:17:08 2020 +1000 + + train the model and plot the ssim + +commit 7081ac937a432f105a4f815429c316bc6c1852c7 +Author: Lei Wang +Date: Sat Oct 31 14:13:50 2020 +1000 + + change the mean ssim into the max ssim + +commit 442ef1d7ad7bfb1023a9a1f6eda0b43c25c371fe +Author: Dattatreya Majumdar +Date: Sat Oct 31 14:12:37 2020 +1000 + + Updated Driver Script + +commit d3b961e88eeed6a0b48453bcfdd8c8f1b9c60f8a +Author: Dattatreya Majumdar +Date: Sat Oct 31 14:06:48 2020 +1000 + + Modified UNET_Mod_Compile.py + +commit 590c14b8c66c12cc10a3a452342dbaba5a04a927 +Author: Max Hornigold +Date: Sat Oct 31 12:32:20 2020 +1000 + + Cleaned Up Driver Script.py + + Make the driver script cleaner, added more epochs and it it getting better results. Can see improvements as the model trains. + +commit d9bcc53c76f39519f04db9e5fc41e2d905ce0541 +Author: Zachary Oar +Date: Sat Oct 31 11:50:56 2020 +1000 + + Separated functions into model and driver files + +commit 5666ca16b362a9786023641a3e25b0e5169b7dcd +Author: Erik Brand +Date: Sat Oct 31 09:15:02 2020 +1000 + + More Complex GAN and converted data to grayscale + +commit 7b8a0a5ad5805233d11347a1c1106b4f4a445908 +Author: Reece Jocumsen +Date: Sat Oct 31 01:29:40 2020 +1000 + + Changed final layer activation function to make generator DCGAN-compliant. + +commit ae90d1bd82ee1803bb9de9e2eb5bea961d424943 +Author: Reece Jocumsen +Date: Sat Oct 31 01:01:34 2020 +1000 + + Added batch normalization and text to show progress of training and testing set gathering. + +commit a5ef8b0a6f4283859866a6289aa327cf5202662f +Author: Xiao Sun +Date: Sat Oct 31 00:23:26 2020 +1000 + + implement learning_rate decay and after 100 epoch, training dsc:0.85; val dsc is around 0.83; test dsc reaches 0.80; + +commit 5dcc3b3a51c0ff60fa42216c8de8042da6ac9d6c +Author: yorkequ98 +Date: Fri Oct 30 21:11:58 2020 +0800 + + Wrapped the definition of the encoder and decoder in separate functions. + +commit 5afbcfd7bf250dd25e4c57f89f9556f8cc4a8da3 +Author: unknown +Date: Fri Oct 30 22:52:51 2020 +1000 + + updated model.py + +commit 3577359692cbc179f6e1bfa73434513a06f50051 +Author: yorkequ98 +Date: Fri Oct 30 20:31:51 2020 +0800 + + Implemented the function to train the model + +commit eb5c1b996a556805c9611338605ffd6e28ece499 +Author: yorkequ98 +Date: Fri Oct 30 20:27:24 2020 +0800 + + Implemented the loss function + +commit 81aa8dc68100a7e60a15f05351b5cb67d05ceaad +Author: Xiao Sun +Date: Fri Oct 30 22:18:29 2020 +1000 + + In this commit, i implement improved UNET according to the reference paper. The training dsc reaches 0.85 after 50 epoch, val dsc is around 0.80. However, test dsc is less than 0.75. + +commit 5a1f7d46ef4d7d0386c9b3aba297e048ec44279d +Author: yorkequ98 +Date: Fri Oct 30 20:08:34 2020 +0800 + + Implemented functions to save the model or to load the pretrained model. + +commit cc4dbebf96770ed0f7c4aac2ca871a1276f0cc22 +Author: Lei Wang +Date: Fri Oct 30 22:06:24 2020 +1000 + + import models from model.py + +commit af629aea9dbfafeefb0e99b8b8211392fe99628a +Author: Christopher Bailey +Date: Fri Oct 30 22:06:21 2020 +1000 + + Using too much memory + +commit 64daa9efe734fd5b71ce855d8b9b10779cbb1519 +Author: Lei Wang +Date: Fri Oct 30 22:01:47 2020 +1000 + + Add compute ssim funtion + +commit bfc87baf460d159bacdaef458d934d291649b773 +Author: Lei Wang +Date: Fri Oct 30 22:01:05 2020 +1000 + + Define the train step function + +commit 299b9d98cd2809c501c51bbe28b3451bc644b657 +Author: Lei Wang +Date: Fri Oct 30 21:59:14 2020 +1000 + + Set parameters for the first train + +commit b7f1a0bb5aad319889228245b915633262a373a9 +Author: Lei Wang +Date: Fri Oct 30 21:58:01 2020 +1000 + + Add save model code + +commit 1af009680c87d692e18e6418a26e20b1bf4e0733 +Author: Lei Wang +Date: Fri Oct 30 21:57:10 2020 +1000 + + Set the optimizer parameters + +commit 38e1ab6cecfde511daf1a62810abed36bc88f0b8 +Author: Lei Wang +Date: Fri Oct 30 21:56:02 2020 +1000 + + reorder the file + +commit 57c76a5bd7298bee84482c6531edcc3713ff3c96 +Author: Lei Wang +Date: Fri Oct 30 21:51:01 2020 +1000 + + Define the loss function of generator + +commit 47096cad2bcc111b5dc2b51f6616aacc0e5f2eb6 +Author: Lei Wang +Date: Fri Oct 30 21:48:18 2020 +1000 + + Define the loss function of discriminator + +commit b53dd3053fcaebe4d0d48d2ea59f9c0ef63df828 +Author: Lei Wang +Date: Fri Oct 30 21:47:19 2020 +1000 + + set cross entropy of the model + +commit 8cf9f3d52025eec416c18bf6ecee4e0f6d27a637 +Author: Lei Wang +Date: Fri Oct 30 21:46:16 2020 +1000 + + Test discriminator + +commit 217103e069290d920d975c2aa539c98e43209060 +Author: Lei Wang +Date: Fri Oct 30 21:45:05 2020 +1000 + + Second build the discriminator model + +commit 8cd6fbfed36386930eca11287d37254ce74c36a4 +Author: Lei Wang +Date: Fri Oct 30 21:44:06 2020 +1000 + + Test generator + +commit 617813ba9dfd9e7b744787dd50de710e11104cf8 +Author: Lei Wang +Date: Fri Oct 30 21:42:13 2020 +1000 + + First build the generator model + +commit ce0a28dcef0f5ad960908f0eed51cd897624b165 +Author: Lei Wang +Date: Fri Oct 30 21:40:44 2020 +1000 + + Add annotation for model.py file + +commit 7c59ece1bdd0b1c97109086563995c8cd1e33c36 +Author: Zachary Oar +Date: Fri Oct 30 21:33:40 2020 +1000 + + Added docstrings and other inline comments as documentation + +commit 8785d21afd97e8a2b8e744acb29415321bc5396f +Author: Lei Wang +Date: Fri Oct 30 21:31:26 2020 +1000 + + load data and image pre precessing + +commit 7e010b22e1786c378f1c3f312015d070937a2be2 +Author: Md Abdul Bari +Date: Fri Oct 30 21:23:32 2020 +1000 + + the function to be used for loading images + +commit 594cc72be9dd482905af1ba9ddc6a4c836e2e08f +Author: Christopher Bailey +Date: Fri Oct 30 21:18:41 2020 +1000 + + Initial implementation of model + +commit aeb20457ed823a338e48e96c46cc16a0c4d6d7e1 +Author: yorkequ98 +Date: Fri Oct 30 18:06:51 2020 +0800 + + Implemented functions to load the image datasets into BatchDataset. + +commit cbc4d335149255e867eefb1bdf76c94984713a8b +Author: yorkequ98 +Date: Fri Oct 30 18:03:23 2020 +0800 + + Added functions to complete the VAE class + +commit 39860d524b24d705a969638076ae7167d4897919 +Author: Dattatreya Majumdar +Date: Fri Oct 30 19:03:03 2020 +1000 + + Change in library name in README.md file + +commit 59ecc059318b353d9b4fbe6074f3cf010be9810b +Author: unknown +Date: Fri Oct 30 18:57:08 2020 +1000 + + model implementation done + +commit 1eae432ecd94ae8e67ee99095a38c18c6137eea3 +Author: Matthew Costello +Date: Fri Oct 30 18:34:01 2020 +1000 + + replaced sigmoid with softmax - as reference unet model would use + +commit d7a6580cf53c19dac913723cb159883c6f037500 +Author: Dattatreya Majumdar +Date: Fri Oct 30 18:26:24 2020 +1000 + + Updated README.md + +commit 9678e47e840d838e68d12519290287c6faf912c1 +Author: Ganze ZHENG <1062168846@qq.com> +Date: Fri Oct 30 17:39:59 2020 +1000 + + Initial commit for testing that git is working properly. + +commit c5934762a30fb739d32f147e23634553602beabc +Author: Matthew Costello +Date: Fri Oct 30 17:21:24 2020 +1000 + + improved model outputs + +commit 3d7192b1aaa16e6be5256fba4f44b55e22d6562b +Author: yorkequ98 +Date: Fri Oct 30 14:20:32 2020 +0800 + + defined the structure of a variational autoencoder + +commit d7c3c0484e76f50c9b0b1422fea7c28eae7eea38 +Author: Shivangiii <48044953+Shivangiii@users.noreply.github.com> +Date: Fri Oct 30 14:50:01 2020 +1000 + + Update README.md + +commit 756e6557eb9c9a676ed206a555597fa188255035 +Author: Max Hornigold +Date: Fri Oct 30 14:46:05 2020 +1000 + + Got Predictions Working + + My predictions do work now, showing bad (but still reasonable) performance. Also significantly updated the README.md file. + +commit 647a9981ff466e589c51cb60405f7b4f3845fdf5 +Author: unknown +Date: Fri Oct 30 14:40:09 2020 +1000 + + added final comments + +commit c82c3ea164f722ad4b23cddf7d98977b2253dec9 +Author: Anna LYU +Date: Fri Oct 30 13:08:04 2020 +1000 + + Initial commit of DCGAN_OAI script. Image processing and show samples. + +commit b4f6260e6db9198e0934d12a7e6c1ee05a9dbe8a +Author: Shrikant Agrawal +Date: Fri Oct 30 11:34:33 2020 +1000 + + Modified: image_helper.py, changed return type to tensor. + +commit 71c9f5925424b3cf5c2fc8f329a20c41029625ab +Author: Shrikant Agrawal +Date: Fri Oct 30 10:25:04 2020 +1000 + + Added git log screenshot. + +commit 91930d009acc0db2b96e2dc13455aae90156ce21 +Author: Shrikant Agrawal +Date: Fri Oct 30 10:21:34 2020 +1000 + + Test on celeb data. Didn't work + + Tried to modify the code for better discriminator and generator by improving the optimizer, layers, batch size and inputs in turn. nothing worked. I think it may have made it worse. Thinking of rolling it back to initial architecture. + +commit e84d740509014c5c1269efd94adc730d4da18221 +Author: unknown +Date: Fri Oct 30 09:04:10 2020 +1000 + + loaded isic data and processed + +commit 80608896b25a617e150130c11d031a069eb34033 +Merge: 616cfba8 c71b96fe +Author: unknown +Date: Fri Oct 30 08:30:38 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/Shivangiii/PatternFlow into topic-recognition + +commit 616cfba82778f905dbb713b3f2726b7938824508 +Author: unknown +Date: Fri Oct 30 08:30:19 2020 +1000 + + added comments to model.py file + +commit c71b96fe0e26bc293bac4e6ad0a1dfc66529806e +Author: Shivangiii <48044953+Shivangiii@users.noreply.github.com> +Date: Fri Oct 30 08:18:43 2020 +1000 + + Update README.md + +commit 0eb5c29dd4dc48df648b5a5e46a967a668de4132 +Author: Shivangiii <48044953+Shivangiii@users.noreply.github.com> +Date: Fri Oct 30 08:17:46 2020 +1000 + + Update README.md + + Readme file final updates! + +commit 14a0dbc55b50fe44f4940943bdeef03fed64d2f4 +Author: Shivangiii <48044953+Shivangiii@users.noreply.github.com> +Date: Fri Oct 30 08:06:11 2020 +1000 + + Update README.md + + editing visualisations section + +commit a654a807ef613f09d45e4858bb9f2dfce8754542 +Author: unknown +Date: Fri Oct 30 08:04:51 2020 +1000 + + added result images in resource folder + +commit dcc47c069a03b7dee726fcd6b89e09199b399cc7 +Merge: 392e8619 c0498f3a +Author: unknown +Date: Fri Oct 30 07:11:27 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/Shivangiii/PatternFlow into topic-recognition + +commit 392e861947ef764cfc28b35c883ae4c4904badc8 +Author: unknown +Date: Fri Oct 30 07:11:05 2020 +1000 + + cleaned code and added comments + +commit 3589365710f0f1605f23ce332f5cb74cf5737729 +Author: Ziyan +Date: Fri Oct 30 01:08:57 2020 +0800 + + Both models training finished. Add presentation notebook for each model. Remove useless files. + +commit ec5231e28be589b33e47d487fb455f2b7cd0e3fa +Author: Bosheng Zhang (Daniel) <740807262@qq.com> +Date: Fri Oct 30 01:25:15 2020 +1000 + + Update README.md + +commit 71d53dc990d96dfa19f347c04ea5140f456702f7 +Author: danielzhangau <740807262@qq.com> +Date: Fri Oct 30 00:56:55 2020 +1000 + + got final avg dsc 0.8285 on test set + +commit 2e520794dd47e95007fab7b7b3eeaff0334d3203 +Author: George Mulhearn +Date: Thu Oct 29 22:59:46 2020 +1000 + + refined proof of set overlap to print more statistics + +commit f9b2d8e6ef9afa07900c857877ce803f4536c32b +Author: Declan Healey +Date: Thu Oct 29 20:51:46 2020 +1000 + + Fixed one hot encoding of mask images. + +commit c0498f3a5dce6c53ab3ef3f0bd662cd7341141b9 +Author: Shivangiii <48044953+Shivangiii@users.noreply.github.com> +Date: Thu Oct 29 20:04:38 2020 +1000 + + Update README.md + +commit 72604d89aa06fd7c9d8eb25e763387347907846f +Author: George Mulhearn +Date: Thu Oct 29 19:53:31 2020 +1000 + + mean square error function, needs further testing + +commit 48a6c1bf43def83218afd47739fe9d1849318be1 +Author: George Mulhearn +Date: Thu Oct 29 19:46:54 2020 +1000 + + added patient split dataset function, should patch any data leakage issues + +commit f0c2ffb7f1c6be6472f3592a233c471b2e49846a +Author: Declan Healey +Date: Thu Oct 29 18:47:50 2020 +1000 + + Added U-Net model training with data. + +commit c898185ddf95578e174d4df81f946ed90ef64e4d +Author: danielzhangau <740807262@qq.com> +Date: Thu Oct 29 18:44:06 2020 +1000 + + rewrite basic unet model in a separate file + +commit c7003db2b28c0f57cf851ccecdbdb872eda17cfb +Author: Dattatreya Majumdar +Date: Thu Oct 29 18:39:16 2020 +1000 + + Individual Dice Coefficients of Images in ISIC test data set + +commit 426e06db82302d8d91838ec178a1938f3e5ef13e +Author: Dattatreya Majumdar +Date: Thu Oct 29 18:35:22 2020 +1000 + + Modified model compilation code + +commit 36c23705bdf9937db5a49803685fd183627cabb8 +Author: Dattatreya Majumdar +Date: Thu Oct 29 18:32:16 2020 +1000 + + Final README.md update + +commit 2969504542235e12b76a45fb4808216f1078e89c +Author: Declan Healey +Date: Thu Oct 29 18:31:54 2020 +1000 + + Created U-Net model. + +commit 54e2a64fcbe341b95ce044e7323114046d53e14d +Author: Dattatreya Majumdar +Date: Thu Oct 29 18:29:56 2020 +1000 + + Sample ISIC predicted segmentation Plot + +commit 3f6e901f01089bb573600c2efc9ae629a8f1fddb +Author: Reece Jocumsen +Date: Thu Oct 29 17:42:09 2020 +1000 + + Changed learning rate of Adam optimizer. + +commit f06166243b26e9cd42c6c5869d0dfe858ea77b85 +Author: Reece Jocumsen +Date: Thu Oct 29 16:46:32 2020 +1000 + + Changed from RGB to grayscale to reduce computation time. + +commit 367aaa016bacf65957b28a57c97ab251b8307e86 +Merge: 0f7f9345 8e4e6ac0 +Author: unknown +Date: Thu Oct 29 16:38:46 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/Shivangiii/PatternFlow into topic-recognition + +commit 0f7f93457254d4aa14044ef6cfd9db583456868c +Author: unknown +Date: Thu Oct 29 16:38:35 2020 +1000 + + built resources folder + +commit 8e4e6ac00e9e54b88d974f7823e7bdf71f2caaaa +Author: Shivangiii <48044953+Shivangiii@users.noreply.github.com> +Date: Thu Oct 29 16:37:07 2020 +1000 + + Update README.md + +commit a2f4b5bd87096c9ff05015639e970c1c327b7bf8 +Author: Shivangiii <48044953+Shivangiii@users.noreply.github.com> +Date: Thu Oct 29 16:36:56 2020 +1000 + + Update README.md + +commit 5c9ace6c3312c4aea0560abdd9efea56a2498a21 +Author: Shivangiii <48044953+Shivangiii@users.noreply.github.com> +Date: Thu Oct 29 16:35:53 2020 +1000 + + Update README.md + +commit 1fe52b96c8658cb4c40d6e22d408de9180ed2fe6 +Merge: fd90ec2a 7ba9bdf0 +Author: unknown +Date: Thu Oct 29 16:34:22 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/Shivangiii/PatternFlow into topic-recognition + +commit fd90ec2a8fe9be31b11f17cc1ea8766c3ba19111 +Author: unknown +Date: Thu Oct 29 16:34:04 2020 +1000 + + image + +commit 7ba9bdf0fce67ad0f0d2e45fa8eeced7ba5ef3b4 +Author: Shivangiii <48044953+Shivangiii@users.noreply.github.com> +Date: Thu Oct 29 16:11:36 2020 +1000 + + Update README.md + + editing readme file + +commit c5b5e190a0f08e2a6adc37540f1a5d3188f74f67 +Author: Shrikant Agrawal +Date: Thu Oct 29 15:32:18 2020 +1000 + + Modified Discriminator: added Conv2d layers. + + It seems that the discriminator is performing poorly and not being able to identify features. modified the structure to improve feature extraction. + +commit d2bbd488da38ae5b55a6786f193373527b024c7c +Author: unknown +Date: Thu Oct 29 15:20:11 2020 +1000 + + building readme file + +commit 66ca15909c4d1a8cb665de1fe91c4fbbb6616e8b +Author: Shrikant Agrawal +Date: Thu Oct 29 15:11:45 2020 +1000 + + added test run screenshots 1,2 + + Test run 1: performed poorly. Test 2, modified train size to 2000 for improving precision. Worked half way. + +commit b897dd297cea2c17699d301f7a5756ff3147cf09 +Author: unknown +Date: Thu Oct 29 14:56:41 2020 +1000 + + driver script- model function calling error fixed + +commit 3ae5db6026bf693046a29d493065fa5fbb7ca719 +Author: unknown +Date: Thu Oct 29 14:53:29 2020 +1000 + + DriverScript separated and ready! + +commit 30c923bc63aa757d351ec6049f6a876300b7e0d4 +Author: Christopher Bailey +Date: Thu Oct 29 14:28:11 2020 +1000 + + Refactor, comment, cleanup and stub model methods + +commit 33470785f87ea44c397d17ff8e5a2fe5d4e69be2 +Author: Christopher Bailey +Date: Thu Oct 29 14:09:55 2020 +1000 + + Visualise loaded image data, images resized to 512, 384 + +commit 941fbec2ace5bea5ee0dbfc2f7be088340c3a8b3 +Author: Jonathan +Date: Thu Oct 29 13:52:54 2020 +1000 + + Renamed folder containing images to resources to follow Shake's naming convention. + +commit 46fa63406ed2b99d7fabc10e898746206d454318 +Author: Christopher Bailey +Date: Thu Oct 29 13:48:26 2020 +1000 + + Initial version of map working, shapes are probably wrong + +commit e43a7e6cf72521dc9c9c5dd0dbc98ea0210c0a4d +Author: Jonathan +Date: Thu Oct 29 13:48:09 2020 +1000 + + Graph size completed. + +commit 26062699198c297dfb996e8a1ff1d99542e472aa +Author: Jonathan +Date: Thu Oct 29 13:47:03 2020 +1000 + + Adjusting graph size. + +commit 04c6970a5db032bb4da37bb90b2185c30761b7f7 +Author: Jonathan +Date: Thu Oct 29 13:46:12 2020 +1000 + + Testing graph sizes. + +commit 0ef73a98ac97de0393838e9714fc2814547d6d16 +Author: Jonathan +Date: Thu Oct 29 13:45:15 2020 +1000 + + Attempting to fix the size of a graph. + +commit cdd603c046da8b8514392852c326bd83ddd380dd +Author: Jonathan +Date: Thu Oct 29 13:44:29 2020 +1000 + + Finished adding to README.md file, checking image stretch. + +commit 5f136440c87b9b622276f7657090e84a4429e937 +Author: Jonathan +Date: Thu Oct 29 13:36:21 2020 +1000 + + Same as previous commit. + +commit b4b22c03538f67dc5ae89878cc17e23219d73111 +Author: Jonathan +Date: Thu Oct 29 13:35:37 2020 +1000 + + Resize graphs. + +commit 2ffda2ad44553ac137d7b0b1fa3cc383107425f3 +Author: Jonathan +Date: Thu Oct 29 13:34:23 2020 +1000 + + Fixed images being stretched. + +commit 5185c1cc7ae29d475f695d338c1fb11c6cc3603f +Author: Jonathan +Date: Thu Oct 29 13:32:59 2020 +1000 + + Added 7 other images. + +commit fa33dfb32efe789cb8393d55caa38b6c5a624db4 +Author: Jonathan +Date: Thu Oct 29 13:14:20 2020 +1000 + + Resize was too small. + +commit c733e1661bc13159346053936c3f4639c6c23474 +Author: Jonathan +Date: Thu Oct 29 13:13:23 2020 +1000 + + Trying to resize images. + +commit aebe6c602cf5df6062947ded0a0c3c955ca04e2b +Author: Jonathan +Date: Thu Oct 29 13:09:40 2020 +1000 + + It helps if you actually commit the images your are tyring to reference... Doing that in this commit. + +commit cb97e726b154014b3bd2407db4d4a10a12200782 +Author: Jonathan +Date: Thu Oct 29 13:08:26 2020 +1000 + + Renamed files, testing if images work. + +commit 9f721d91a6ed708eecd65c90c82effdc5d5fbac8 +Author: Jonathan +Date: Thu Oct 29 13:05:31 2020 +1000 + + Moved screenshots into their own folder to reduce clutter. + +commit 9aaa0de85e2b974326d558dee91bc241fdcd6b21 +Author: Jonathan +Date: Thu Oct 29 13:04:35 2020 +1000 + + Added screenshot results to git. + +commit b52e67139faa205f9bb03f06da1b89ff46c47c15 +Author: Jonathan +Date: Thu Oct 29 12:58:55 2020 +1000 + + Updated README.md, finished dependencies. Removed NumPy from matplotlib from generator_script.py. + +commit 441dc0099aee32c44950a4bf0179a27c299fb60a +Author: Jonathan +Date: Thu Oct 29 12:48:50 2020 +1000 + + Finished describing generator_script.py. + +commit f7e91e10fe11ad1bd13dc868024f38c14d02b748 +Author: Jonathan +Date: Thu Oct 29 12:43:09 2020 +1000 + + Testing the list function in the README.md file. + +commit c79209b3794cb6cde3e215fdfbbddaf7e166d794 +Author: Max Hornigold +Date: Thu Oct 29 12:34:58 2020 +1000 + + Added Read Me File + + Added a README.md file and removed the unused jupyter notebook. + +commit f782e97d5717361aad110a3e00176cb0462b65d0 +Author: Jonathan +Date: Thu Oct 29 12:32:28 2020 +1000 + + Testing how to format the README.md file. This commit does not modify any code. + +commit 86852168a75c233f044fae5865a24f2568606500 +Author: Max Hornigold +Date: Thu Oct 29 12:30:33 2020 +1000 + + Fixed error in Model + + Fixed an error in the U-Net model and make a number of improvements. Model run's, however does not give binary output data. + +commit a17bf09f2825a8b65fb0b34126d825175005701d +Author: Jonathan +Date: Thu Oct 29 12:29:06 2020 +1000 + + Added empty README.md file. + +commit a2b241d2439a970f607707ab29c5ac5e413daa32 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Thu Oct 29 10:28:23 2020 +0800 + + all picture show + +commit 2d715457d48e5dc4f1c9329cb03bcb4a9c9fe801 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Thu Oct 29 10:27:30 2020 +0800 + + Update README.md + +commit 824852eedf488e9d0d9383af88efc489e030e26e +Author: Jonathan +Date: Thu Oct 29 12:25:48 2020 +1000 + + Removed referenced function from StackOverFlow that exits EPOCH training when a specific value for validity is reached as this code did not effect the model when it was training. Code is still working as to be expected. + +commit 62a500a1cd3ff6b7ce1b4477b541aaaa87d08a42 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Thu Oct 29 10:25:08 2020 +0800 + + try evaluation and predict show + +commit 63bb96ff9b3cee18a32c9314eeed9a4549b60b63 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Thu Oct 29 10:21:32 2020 +0800 + + picture plot and author information add + +commit 2b55dd7a32ab2c6a4e3994e9aebe12b8095e19cc +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Thu Oct 29 10:19:31 2020 +0800 + + adjust picture show + +commit 0b1af1afe9ad801800d039a453f72de79fb0ec2a +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Thu Oct 29 10:13:38 2020 +0800 + + picture show + +commit 1eb4f6610aa70b2145b850cd74b177581f2a142a +Author: Shrikant Agrawal <49804643+agrawal-s@users.noreply.github.com> +Date: Thu Oct 29 11:29:20 2020 +1000 + + Added a readme file. + +commit 37299dbd21f2e0d9eb7e3098582268f3104a9566 +Author: Shrikant Agrawal <49804643+agrawal-s@users.noreply.github.com> +Date: Thu Oct 29 11:13:10 2020 +1000 + + Added a image file for markdown. + +commit 707cbea58e5e1e1841f5b2c5590302792ca86316 +Author: Shrikant Agrawal +Date: Thu Oct 29 10:51:48 2020 +1000 + + Added first test run screenshot of the overnight epoch run. Side comment: unsuccessful run. + +commit e7fdda4c76418336f54d08f470b20df459120ee9 +Author: Shrikant Agrawal +Date: Thu Oct 29 10:49:45 2020 +1000 + + built generator, discrimintor and combiner module for the GAN. Modified the layers to incorporate 128 x 128 and 256 x 256 size images. changed epochs to 2000, 25000 and 50000. Kept the script running overnight for results. + +commit 00e987b9c87f089bcc38e0d33c873437f30190c9 +Author: Shrikant Agrawal +Date: Thu Oct 29 10:46:34 2020 +1000 + + Modified Image helper file to incorporate Glob and proper use of TF while image load. + +commit 66b9b8d4c8b1fedc5401140975dff693d190e0de +Author: Declan Healey +Date: Thu Oct 29 03:56:09 2020 +1000 + + Fixed image and mask tensor resizing. + +commit d17ec84623eccb79548fc08377ad025f9c2ca981 +Author: Ziyan +Date: Thu Oct 29 00:46:15 2020 +0800 + + Add cal_ssim function to DCGAN + +commit bfd58b68d3807d975f962129ab19cf5d4331b6e7 +Author: Ziyan +Date: Thu Oct 29 00:07:23 2020 +0800 + + Reconstruct the generator model. + More SSIM Test on the original test. + +commit 9e15c5f9ddac4a4e3744d0a0ac78d96e3f020d28 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Wed Oct 28 21:44:49 2020 +0800 + + Update README.md + + edit split dataset readme.md + +commit 167d2cdf2044cdc23c37ef0205ecc9e596f580f4 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 19:47:28 2020 +0800 + + result submit + +commit 746a30c843d9d38ff0a1f079ca95941fe72deb97 +Author: Dattatreya Majumdar +Date: Wed Oct 28 21:05:32 2020 +1000 + + Final README.md update + +commit c877907a22a46c5dd3a3fb679661ae0ab04c4bfd +Author: Dattatreya Majumdar +Date: Wed Oct 28 21:02:58 2020 +1000 + + UNET Image + +commit 5203ed9cde9e3475bc67c5ecbc321bc9e740fa2b +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 18:58:26 2020 +0800 + + try 2 of pic + +commit 8e2fde704dfffb1b7cea0cd4bf0019545bba2a87 +Author: Dattatreya Majumdar +Date: Wed Oct 28 20:55:43 2020 +1000 + + Updated README.md file + +commit aaf2b7c07135a53545a6ddb5bca4e5193056d897 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 18:50:49 2020 +0800 + + trying put pic in + +commit 003ac443fc9f05b85487e18d2465c870453d919e +Author: Dattatreya Majumdar +Date: Wed Oct 28 20:50:10 2020 +1000 + + Updated README.md + +commit 86fadae3ffb4366e13783f8acb2e994cd727879e +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 18:47:07 2020 +0800 + + format adjust + +commit cf9dc7cadaeb5967a160d27f611d55727bd14c05 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 18:45:17 2020 +0800 + + description of main.py and model.py + +commit 8a129555272deb58ea7c736fb9fd093ad72f0150 +Author: Dattatreya Majumdar +Date: Wed Oct 28 20:39:10 2020 +1000 + + Updated README.md file + +commit 2faece895f49611fca2c4db87415b512f7986592 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 18:23:11 2020 +0800 + + overview of report + +commit 949d4c787313fd180178878f6763cf6fd935a7ca +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 18:16:33 2020 +0800 + + loss visualize + +commit 388422d49d48bd727e133bd8ad9ec3197bf9bb5b +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 18:15:42 2020 +0800 + + accuracy visualize + +commit ae593134fa7fe99470720a589fd097f67122b874 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 18:14:58 2020 +0800 + + picture(evaluation of the model) + +commit 4f99aa32fb3b31235c5d590de96a3cfb39744d4d +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 18:13:25 2020 +0800 + + add some parameters in main.py + +commit 9383ad3245918e0afce413ecd2af7895635d5355 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 18:12:25 2020 +0800 + + add load_model function into model.py + +commit bb5ab9b4aae28313193a83e43445355fce553a57 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 18:10:12 2020 +0800 + + predict of the model + +commit f185e75136204b6f684714a8ada276c717d5d9a5 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 18:08:44 2020 +0800 + + train result of two kind of model + +commit fd6a163669c4ef3222feb64b8db2e5c5df69bf54 +Author: Jonathan +Date: Wed Oct 28 18:12:00 2020 +1000 + + Added final comments, code is working as intended. + +commit d3d4db806a162fecf448679c41c89d71a0722bb7 +Author: Jonathan +Date: Wed Oct 28 18:10:15 2020 +1000 + + Added a new file to generate and plot the results. + +commit fe060efb85bcf5714103f39b14cf23b3e4fa5a83 +Author: Jonathan +Date: Wed Oct 28 18:00:57 2020 +1000 + + Added comments for beginning of execution script. + +commit 8ef43b434414e3e56a6748eb77732b3150440791 +Author: Jonathan +Date: Wed Oct 28 17:56:14 2020 +1000 + + Added more comments to describe what is happening at each step. Referenced the function that defines a threshold from Stackoverflow. This code could be removed as it does not come into effect. See method description for more details. + +commit 1e8e0566bcc64fd636fd03ba589092df3d24cb86 +Author: Shrikant Agrawal +Date: Wed Oct 28 17:34:33 2020 +1000 + + Changed image helper to get variable image size. (to get 128 x 128 size image) + +commit d4edccfe5326500f6ab896de344395a9078914ff +Author: Shrikant Agrawal +Date: Wed Oct 28 17:09:03 2020 +1000 + + incorporated image helper function and load from the helper file. + +commit 78a96962957347884dca1750cd1bbcd0f2173ceb +Author: Dattatreya Majumdar +Date: Wed Oct 28 16:59:27 2020 +1000 + + Updating the number of training epochs of the UNET model + +commit 941c511477128f8ebec03db847ea23695237f7ea +Author: Jonathan +Date: Wed Oct 28 16:59:24 2020 +1000 + + Finished model building script, now entire model can be called from one file. + +commit c74bb643d88e7b9c38838c344ea38f91f6afcd16 +Author: Dattatreya Majumdar +Date: Wed Oct 28 16:56:29 2020 +1000 + + Updating the U-NET Model + +commit 1a31d9ff3e53cdbd2ba20aa2b6366a6cd6e175a6 +Author: Max Hornigold +Date: Wed Oct 28 16:55:20 2020 +1000 + + Removed Images, figured out how to import data + + I removed the images from the repository. I also got most of the driver script and model working. + +commit 11e91c9af331b49f446af94c8ae0d2f088676946 +Author: Dattatreya Majumdar +Date: Wed Oct 28 16:50:25 2020 +1000 + + Driver Script + +commit c9d05d32bffd913a4cdd0c5642f2e3f391375840 +Author: Shrikant Agrawal +Date: Wed Oct 28 16:49:21 2020 +1000 + + Added image helper file to load, plot and process image data. + +commit a183f8c614a81ef7efebed8be6dd58cf9be563b5 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 14:46:27 2020 +0800 + + Move mode.py into Wenhao-AKOA folder + +commit d01fc7608c4aad55db7504711cdc9c24f0f77660 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 14:45:49 2020 +0800 + + Move main.py into Wenhao-AKOA folder + +commit 322fcab574a0a0b025a8ebdad45e81fdb030e04e +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 14:42:43 2020 +0800 + + Create README.md + +commit 8cc6d7e57ccbdd6bf524c92547e0a38b03ec3ba4 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Wed Oct 28 14:42:21 2020 +0800 + + Delete Wenhao-AKOA + +commit 106c3fa953c14a80eb2a4b187b46d50ec45b0f03 +Author: Isabel Peters +Date: Wed Oct 28 16:27:57 2020 +1000 + + Load and display images + +commit bb5fed6114b5e55ca6c961931df8e564b6ffefed +Author: Shrikant Agrawal +Date: Wed Oct 28 16:27:49 2020 +1000 + + Added a base jupyter notebook file: recognition/Shri_GAN/Notebook/Git_DC_GAN_28102020.ipynb + +commit 55091e1e30650978dec0cfcd657f1fa8a5f57caa +Author: Jonathan +Date: Wed Oct 28 16:24:41 2020 +1000 + + Finished building model in separate file. + +commit 66fe67dbca79f98d2ac59cd1a3139a0755dd93cd +Author: Lei Wang +Date: Wed Oct 28 16:09:33 2020 +1000 + + add readme, model.py + +commit 03bcfdffab52be66e497879a1896769055b2fb0d +Author: Lei Wang +Date: Wed Oct 28 16:06:03 2020 +1000 + + A test for commit + +commit d837d0f50752f48ddbd7df9c2999353c92d6fe41 +Author: Jonathan +Date: Wed Oct 28 15:53:22 2020 +1000 + + Added new file to build model instead. + +commit deb813d5bf1930250a488c98b4cccc6a580fe947 +Author: Jonathan +Date: Wed Oct 28 15:39:35 2020 +1000 + + Added function to build model. + +commit 5226eacc858ea4cd4bb9e189470c5e74f8508503 +Author: Shrikant Agrawal +Date: Wed Oct 28 15:39:08 2020 +1000 + + Added a new screenshot file as a test. + +commit 4c241d2829fb37c1705820dcf87dcf0c104a6a48 +Merge: 5724106d 293fa667 +Author: danielzhangau <740807262@qq.com> +Date: Wed Oct 28 15:30:29 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/danielzhangau/PatternFlow into topic-recognition + +commit 5724106dedc253bbad37f630d3e09196bc266153 +Author: danielzhangau <740807262@qq.com> +Date: Wed Oct 28 15:30:17 2020 +1000 + + add basic unet structure image for readme + +commit 293fa66731a2efb64871a0cfcd1c9c6546934de3 +Author: Bosheng Zhang (Daniel) <740807262@qq.com> +Date: Wed Oct 28 15:28:14 2020 +1000 + + Update README.md + +commit 4cb0d615ef03cd63f3f23fbbda9dfd1bc765cfc3 +Author: Bosheng Zhang (Daniel) <740807262@qq.com> +Date: Wed Oct 28 15:24:31 2020 +1000 + + Update README.md + +commit 1270a55e14d1f200f21bba775dc3894fc34757ff +Author: Jonathan +Date: Wed Oct 28 15:13:16 2020 +1000 + + Began building model using function. + +commit b5b71011101706a18e35b6efbf9985d728441b92 +Author: Jonathan +Date: Wed Oct 28 14:46:29 2020 +1000 + + Updated driver script and fixed sytax errors in generator script. Code can now be run from driver script. + +commit 40ec6b49b1dca305bb1ff8c19a4a9176050bff5b +Author: Jonathan +Date: Wed Oct 28 14:13:25 2020 +1000 + + Added executable script. + +commit 806c07e5fcd694fcb09a034aebe696d043b6d91a +Merge: 6b8da510 5b95c6bf +Author: unknown +Date: Wed Oct 28 08:55:43 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/tusharvinayaraj/PatternFlow into topic-recognition + +commit 6b8da510792d92caab792e5d5b16d0609e946071 +Author: unknown +Date: Wed Oct 28 08:39:36 2020 +1000 + + loadingData + +commit db7cd152784c1d8f8d7c9746e48c56290e7add2f +Author: Ziyan +Date: Tue Oct 27 23:55:04 2020 +0800 + + Imageloader: modify the load_to_tensor() function to support load specific interval of slice. + DCGAN: Add one more layer on the model. + +commit ed5c64e80dead515e09ea05a8c24698de13c0931 +Author: Ziyan +Date: Tue Oct 27 20:43:09 2020 +0800 + + The previous test file added + +commit a32073b8a7cf94dcef766a14c07551a2a4c9e4d4 +Author: Ziyan +Date: Tue Oct 27 19:56:41 2020 +0800 + + DCGAN - Add load_model(), generate_images() functions + Yesterday trained 10k epoch model, the SSIM is around 0.52, not ideal. + SSIM test on the real image. the SSIM is around 0.59 (256*256) 0.57(128*128) 0.5(64*64) + Going to increase the generator output size, and focus on specific interval of slices. + +commit 9daa4b3e9e99a25c0dbed81683e1011f8c2e3406 +Author: Donghong Zhuang <50001468+JeniusDZ@users.noreply.github.com> +Date: Tue Oct 27 12:45:08 2020 +0100 + + Create ReadMe.md + + added readMe file + +commit a3fc588f777e3638e5b72f5c8544fc10f4d0d82e +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Tue Oct 27 18:53:41 2020 +0800 + + add visualize and precidict into main.py + +commit c7abc6ce105b4435cd98b1487128a664a0d40ed9 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Tue Oct 27 18:52:33 2020 +0800 + + model2.0 with highest value accuracy of 0.9812 + + output activation -- softmax + loss -- categorical_crossentropy + +commit bc898db38980bc7674acfcd4f91dd6fe98835ab0 +Author: Christopher Bailey +Date: Tue Oct 27 19:06:40 2020 +1000 + + Implement loading data and creating dataset. Mapping still to be implemented. + +commit c8715612e725fdc85ab2e6ad4a7664640ca4f64e +Author: Wenjun Zhang +Date: Tue Oct 27 18:16:43 2020 +1000 + + update model + +commit b7dd648685241910ab7670897726d43dc41b964f +Author: danielzhangau <740807262@qq.com> +Date: Tue Oct 27 18:12:14 2020 +1000 + + basic unet got dice 0.7git add resources/Improved_UNET.png ! + +commit 2e79fddd1c87a45d90e408148e77a25b01aba6f4 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Tue Oct 27 15:50:58 2020 +0800 + + main.py with visualize and plot + +commit 6b914e2803286cffb81e87eeaeced5eaf867ab41 +Author: Jonathan +Date: Tue Oct 27 17:19:45 2020 +1000 + + Ran into bug, attempting to debug. + +commit b5763561122faf539aa16f7ab1266c192e3dbe5a +Author: Jonathan +Date: Tue Oct 27 17:07:46 2020 +1000 + + Finally, formatted data for both the X-sets and the Y-labels. Now the file is ready to be called by the driver for training. + +commit b79324e97f6673b67476e3e69990944b69a58939 +Author: Jonathan +Date: Tue Oct 27 17:02:11 2020 +1000 + + Added Y labels by parsing the list of testing, training and validation sets to create accurate labels for each set. + +commit 4a6d0b9fb6806387874f209a3db573c2e1c2ccf8 +Author: Bosheng Zhang (Daniel) <740807262@qq.com> +Date: Tue Oct 27 16:57:49 2020 +1000 + + Update README.md + +commit ee01a03faf9049caaae2e03566dc9d83bdd06b73 +Author: Jonathan +Date: Tue Oct 27 16:57:01 2020 +1000 + + Added main method to call functions. Added function to load each image into numpy array. Now there are three numpy arrays with each of the loaded types of data (train, validate, test). + +commit af4005495edff98c197d9453fec2056c3d3b7fe6 +Author: Jonathan +Date: Tue Oct 27 16:50:44 2020 +1000 + + Partitioned the unique IDs into train, test and validation sets. Pulled all file names that corresponded to each patient in each set. + +commit fe4a33c21d083c709c84f67876221a4d16dd15fe +Author: Jonathan +Date: Tue Oct 27 16:43:48 2020 +1000 + + Updated script by transferring previous code into function for easier readability. + +commit 7cda17baa316728fadbce6d51675d502ee66a324 +Author: Jonathan +Date: Tue Oct 27 16:34:36 2020 +1000 + + Added data cleanser to separate OASIS dataset into patient ID and patient images. + +commit 80bc0f763d540cb1ef35c68e32eefe22f2aeb2cf +Author: Jonathan +Date: Tue Oct 27 16:24:58 2020 +1000 + + Created support script to generate data from the OASIS dataset. + +commit 2c660d01bd38977b8bf3a2851c9f3abd61ef3eb9 +Author: unknown +Date: Tue Oct 27 16:08:10 2020 +1000 + + isicImprovedUnetImplemented + +commit 8840ac433b8ee64501231d024eccaadd52aa2cd4 +Author: unknown +Date: Tue Oct 27 16:02:05 2020 +1000 + + isicLossImplemented + +commit 17b23bf47ee8eaabdc1371c589cf05ec82b0a830 +Author: Bosheng Zhang (Daniel) <740807262@qq.com> +Date: Tue Oct 27 15:59:49 2020 +1000 + + Update README.md + +commit ad92876b88b637da4c0b560546d2f4ff07a77928 +Author: Bosheng Zhang (Daniel) <740807262@qq.com> +Date: Tue Oct 27 15:42:27 2020 +1000 + + Update README.md + +commit 52c619ecafe3629fed573e76f4703b0c8f41b831 +Author: Vincentius Aditya Sundjaja +Date: Tue Oct 27 15:35:23 2020 +1000 + + tried using DSC as metrics and loss + +commit df4f12deaa408a131cc3bd878138d5524eefe8bd +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Tue Oct 27 15:14:30 2020 +1000 + + continue README.md + write Dependencies, Workflow + +commit e10480cc12d988ba75b65b7ec7c2561051350c8f +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Tue Oct 27 15:03:06 2020 +1000 + + show example and interests in the README.md file + +commit 1d2559da2ab0329fb44cf55b0b78d6034b37dd12 +Author: MajorRedux +Date: Tue Oct 27 15:27:14 2020 +1100 + + Model testing, Relu-Adam-HeUniform, Selu-Nadam-HeUniform + +commit 28f2246a0e9d89885b177ad3bc033c89ffd565d9 +Author: Bosheng Zhang (Daniel) <740807262@qq.com> +Date: Tue Oct 27 14:22:53 2020 +1000 + + Update README.md + +commit 526b7c9019a40629ac1373b6e3b40dc9bd42c54d +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Tue Oct 27 14:08:55 2020 +1000 + + Write the structure of uNet + +commit dab69cf3be42501a8b61d199bc020002a927c44f +Author: danielzhangau <740807262@qq.com> +Date: Tue Oct 27 14:04:22 2020 +1000 + + store result of improved unet + +commit b4240cb5de15798565473a6a83b7bc97ea893ae0 +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Tue Oct 27 13:39:02 2020 +1000 + + Write the description of README + +commit a37c162ac84085c3fcf6f6da859a651fdf0c40a9 +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Tue Oct 27 12:58:46 2020 +1000 + + Create README.md file + +commit 7033db0a49aab84fe3bfb8e8a7718e237d2e5116 +Author: Christopher Bailey +Date: Tue Oct 27 12:41:40 2020 +1000 + + Stub required files and check repository correctly set up + +commit 073d847d1a254ed7756009850f17c8bf8a9626f6 +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Tue Oct 27 12:39:35 2020 +1000 + + Make ISICs_Unet.py file to use model.py's function + +commit 93e8b80f05a0663ddc44be0de728f41d5826d99c +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Tue Oct 27 12:32:21 2020 +1000 + + Create model.py file. + Remove every function about model into this file. + Also make the model structure as a function to make it callable. + +commit c843a85c56212a80c8f2099a9d8815fcf8ef2fd7 +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Tue Oct 27 12:23:30 2020 +1000 + + test + +commit 1c7efb97b3f852ea7efd3c67615a0dc2b9039a25 +Author: Ziyan +Date: Tue Oct 27 01:50:54 2020 +0800 + + Done with the model object, start training + +commit acb2049a4c975c93a4a9ea700a6e49f3ebe796c5 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Tue Oct 27 02:23:08 2020 +1000 + + Reverted to previous method for loading and processing data to allow segmentation into 3 partitions (train, val, test) + +commit 522e32bb9d5acc4df8860f931bbf804276717dda +Author: Antoine Le +Date: Tue Oct 27 02:06:54 2020 +1000 + + adding predictions with test set and graph + +commit 9288d5d49ced40542bfbb91d6011757e8764748c +Author: Antoine Le +Date: Tue Oct 27 01:19:04 2020 +1000 + + adding predictions and training to driver + +commit 71a915e10b9d226aa84b395a7a8f7180ff794e31 +Author: Antoine Le +Date: Tue Oct 27 01:07:01 2020 +1000 + + visualising data and building model + +commit 016f5e6bd33f745fb152f1ac7d07a4cf17b33c51 +Author: Antoine Le +Date: Tue Oct 27 01:02:09 2020 +1000 + + rewriting driver using methods from helper.py, added + data splitting/sorting + +commit 241a4a3bd6778d0c697fe068e15cd7504b4c4576 +Author: Antoine Le +Date: Tue Oct 27 01:01:19 2020 +1000 + + adding shuffling, splitting methods to helper.py + +commit 0cdae4d95ff406fb833135c4c81b7f22f51bcc3c +Author: Antoine Le +Date: Tue Oct 27 00:36:15 2020 +1000 + + writing all the methods from main jupyter notebook into + seperate .py file + +commit 143b2ad5b4ed71cb30a91519710e1a847fd732b7 +Author: Donghong Zhuang <847345413@qq.com> +Date: Mon Oct 26 14:29:12 2020 +0100 + + compared one batch of predicted data and class labels + +commit 6993bac8305fe0191805dce00da337096f0ace27 +Author: Donghong Zhuang <847345413@qq.com> +Date: Mon Oct 26 14:21:20 2020 +0100 + + train the classifier and evaluated it. plotted the learning curves. + +commit 2b7cf1f877c5376fb680b180256404660da74307 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Mon Oct 26 20:46:53 2020 +0800 + + model 1.0 with highest value accuracy 0.9756 + + output activation -- sigmod + loss -- binary_crossentropy + +commit 31a4eeaf2ad05005369fa66b74db2bf693734b31 +Author: Donghong Zhuang <847345413@qq.com> +Date: Mon Oct 26 13:46:26 2020 +0100 + + Finished the knee classifier model + +commit 1d835d07e21c25a47f3cdc7dad26f2b34328d8fb +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Oct 26 22:35:17 2020 +1000 + + Tweaked some hyperparameters + +commit f4bbc4553bbe7df2acb8865ba9dcc5ca2be7d351 +Author: Erik Brand +Date: Mon Oct 26 22:30:54 2020 +1000 + + Changed all layers to 16 deep + +commit 5e2ab987d47b43635099535b5f8032282fcaf636 +Author: Erik Brand +Date: Mon Oct 26 22:30:28 2020 +1000 + + Bug fixes with SSIM + +commit 73164d986a5357dcb866ff6302ec0cc31afc51bb +Author: Kelsey McGahan +Date: Mon Oct 26 22:08:03 2020 +1000 + + Added the import and unzipping of AKOA_Analysis data from url to Driver-Script. Fixed spelling in README + +commit 5554fbf7702ffe2f4fabe5151f322930b74cd71b +Author: Donghong Zhuang <847345413@qq.com> +Date: Mon Oct 26 13:06:58 2020 +0100 + + created basic functions in the knee classifier DL model + +commit 01130028e46f80775b6110c304e2ff6f96184fe1 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Oct 26 21:55:43 2020 +1000 + + Added code to build, compile and train cnn model + +commit 6c9673c18aaa888c7543c483bd33f748f6e0f173 +Author: Jaydon Hansen +Date: Mon Oct 26 20:57:05 2020 +1000 + + Fixed a bug where BatchNormalization() was being called incorrectly + +commit bcb54391041e4adb7b8a360b9feb2d24ae977763 +Author: danielzhangau <740807262@qq.com> +Date: Mon Oct 26 20:40:01 2020 +1000 + + final commit on normal u net trial + +commit 02c7b9525adaed2208f66684693b68c010f27c3b +Author: Jaydon Hansen +Date: Mon Oct 26 20:34:43 2020 +1000 + + Switched project to UNet. Added a simple UNet model with a test script. + +commit c78b74e35100a9157b89b050f4a32c388a73f0e0 +Author: Kelsey McGahan +Date: Mon Oct 26 20:28:38 2020 +1000 + + Created blank Classify-Knee-Laterality-Model.ipynb and Driver-Script.ipynb files + +commit d0d77a8fd6ce9bae35be696e4504db65c3eab6e9 +Author: Dattatreya Majumdar +Date: Mon Oct 26 20:28:19 2020 +1000 + + Functions for fitting, predicting and evaluating the UNET model on the ISIC data set + +commit 809b11af0d354b78cd722cf5997c2a5b8cd70dda +Author: Dattatreya Majumdar +Date: Mon Oct 26 20:15:55 2020 +1000 + + Function for generating the UNET Model + +commit 1928cae90beaa27f02ee74a6ffe0cc572c76f118 +Author: danielzhangau <740807262@qq.com> +Date: Mon Oct 26 19:44:34 2020 +1000 + + did i success? + +commit 49e0406a0534d11afed89a62a4632870c8863b63 +Author: Kelsey McGahan +Date: Mon Oct 26 19:43:05 2020 +1000 + + Created README.md + +commit 523d29ff5e45425fbbcae419cb5c0f474e95f3d5 +Author: Donghong Zhuang <847345413@qq.com> +Date: Mon Oct 26 10:41:37 2020 +0100 + + finished dataset creation function and tested it + +commit 3e648ef99cd2eb45e926e7a0c9f8402d1ff542b8 +Author: Matthew Costello +Date: Mon Oct 26 19:02:44 2020 +1000 + + Added more commenting + +commit addf76eb57a9e06b7cc33eb51b89374236f5999d +Author: Bosheng Zhang (Daniel) <740807262@qq.com> +Date: Mon Oct 26 18:03:45 2020 +1000 + + Update README.md + +commit a611316059838d3bff842537d12adb585ef7fd52 +Author: Matthew Costello +Date: Mon Oct 26 17:53:42 2020 +1000 + + Improved test visualiser + +commit 40c407fba4b509ed1b530d26d8f327a6d812e849 +Author: Bosheng Zhang (Daniel) <740807262@qq.com> +Date: Mon Oct 26 17:06:54 2020 +1000 + + Update README.md + +commit c6a6bac91aedba39d874768123927eeaf06112ec +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Mon Oct 26 16:59:42 2020 +1000 + + Updated to use tf preprocessing fns in tf v2.3.1 + +commit 1b24219246cf493646cb43414a937d3942f1a979 +Author: Bosheng Zhang (Daniel) <740807262@qq.com> +Date: Mon Oct 26 16:36:25 2020 +1000 + + Create README.md + +commit c69c52e302e7841f8b99a954b9da817e30995cb1 +Author: Jaydon Hansen +Date: Mon Oct 26 16:27:55 2020 +1000 + + Created problem folder and added notebook for colab exploration + +commit 40e18a3e2f52736ca4682fe4091b60b29fa8d425 +Author: Zachary Oar +Date: Mon Oct 26 14:16:56 2020 +1000 + + Added a dice similarity coefficient function as a metric, added more output images to plot + +commit 5c85b35f6bfc1995f1da552916a47493f9efe94a +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Mon Oct 26 12:02:19 2020 +0800 + + Construct the model + + The first try of constructing the model in CNN + +commit 982f3efae62e0417b3930b5817de0d4c66148877 +Author: Matthew Costello +Date: Mon Oct 26 13:36:39 2020 +1000 + + Modularize models and test_driver code + +commit 7d56558bb1f6fa6ab8b06d91fb7fabce5c2d019f +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Mon Oct 26 13:05:20 2020 +1000 + + evaluating the unet model + writing the dice similarity coefficent metrics and evaluate the model by it. + The dice similarity coefficent is 0.84 for the test set. + +commit a115e0a373e77fa12dbebee672abd8e435fd6140 +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Mon Oct 26 13:03:16 2020 +1000 + + Building the improved uNet model. + +commit 8f55c165046c990260878caff52bdfa37f02d9a2 +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Mon Oct 26 12:52:04 2020 +1000 + + Finishing loading the original images and the segmentation images and resizing them into the same shape (256,256). + For the original images, the final size is [2594,256,256,3] + For the segmentation images, the final size is [2594,256,256,1] + +commit d2516c2bb123fbe527abaee9352a5ce720606e55 +Author: XiaoqiZhuang <49736848+XiaoqiZhuang@users.noreply.github.com> +Date: Mon Oct 26 12:47:46 2020 +1000 + + Write import + +commit 24af1ee29767dd3a7a925791fc61a1ee6e00f895 +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Mon Oct 26 10:29:45 2020 +0800 + + Add files via upload + + Preprocessing the picture data into train, test, Val and split them into two class according to their name + +commit 9a55a6fa7f16b7b01d1821ec8032b044e48356b3 +Author: Zachary Oar +Date: Mon Oct 26 10:21:52 2020 +1000 + + Added a pyplot to show a generated image vs its expected output + +commit 71db826ea273808c78e7eddbd6df8bc667c2128d +Author: MajorRedux +Date: Mon Oct 26 11:19:42 2020 +1100 + + Implented Generator and Discriminator + +commit c2df08ebb65e97ed640ed7fe49f3c3b1965f1570 +Author: Zachary Oar +Date: Mon Oct 26 10:00:11 2020 +1000 + + Added standard unet model and training/evaluation for one epoch + +commit 552b48cbe44bd73a1b79682560cabb3c4a546545 +Author: MajorRedux +Date: Mon Oct 26 10:28:28 2020 +1100 + + Delete report_utility.ipynb + + Couldn't mount utility files. Scrapping. + +commit 0c25205e468a4f5d940086b3581d83bd942858b2 +Author: Matthew Costello +Date: Mon Oct 26 02:23:06 2020 +1000 + + Improved model and added example segmentation prediction + +commit c0774dbc4580e7ebeb410e2e95c7857c6fd6d566 +Author: Morgan Nierfeld +Date: Sun Oct 25 23:15:33 2020 +1000 + + removed batch normalisation, changed the filters back to 8 starting filters and changed the alpha on the leaky Relus to 0.3, seen a bit of an imporvement + +commit 70fb0f25af47bd06d009afe1409ac9c9350a71e3 +Author: Matthew Costello +Date: Sun Oct 25 22:46:34 2020 +1000 + + Improved model and driver slightly, starting to work on driver outputs + +commit 01ec021e2af6bb7dd4d5be1954421a124b2ff9fa +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Sun Oct 25 22:37:33 2020 +1000 + + Added code to load and preprocess data. + +commit a262bea3c49fd3fdd9f9ac3ffffad66c44b1d11f +Author: Declan Healey +Date: Sun Oct 25 22:35:20 2020 +1000 + + Added data pre-processing for model training, testing and validation. + +commit 2f4cf545a25fd82edcd70ce0dbdad411bb983c14 +Author: Morgan Nierfeld +Date: Sun Oct 25 22:18:17 2020 +1000 + + we are now calculating the DSC for each test image and displaying the predicted images. We also have reduced the number of initial filters to 4 in this version. Now going onto play with batch normalisation + +commit 6a5741fffb442c12f4e82474409ad33d4d4f71b8 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Sun Oct 25 20:48:24 2020 +1000 + + Update classify_laterality.py + +commit 1acff7b1a6d578998b73500bf22da6c4675c1c14 +Author: ArunHarish +Date: Sun Oct 25 20:42:25 2020 +1000 + + Made the final Conv2Dtransponse to have just a single filter as its size + +commit 88064286ae2f24e8c617fc5ef1fdfe49a595da50 +Author: ArunHarish +Date: Sun Oct 25 20:33:04 2020 +1000 + + Image output generator noisy + +commit ed430573ebbc010d23e5d21fdba333f9a94af32c +Author: ArunHarish +Date: Sun Oct 25 20:31:36 2020 +1000 + + Made the generator to output 256x256 noisy image from normal distribution. + +commit 40e91c0d056ab9b683fbf31dde1293c8930e02be +Author: Matthew Costello +Date: Sun Oct 25 20:02:39 2020 +1000 + + Completed early version of imprv. unet + +commit 98da2429dbd5b15b9862abb86bf6e6856b6cc6e7 +Author: deliciousturtle <49872862+deliciousturtle@users.noreply.github.com> +Date: Sun Oct 25 16:45:39 2020 +1000 + + Create classify_laterality.py + + Initial commit + +commit 4650412277ccfa497db676cafc82d0ccedfe670d +Author: Dattatreya Majumdar +Date: Sun Oct 25 15:57:30 2020 +1000 + + Functions for preprocessing lesion and segmentation images of ISIC data set + +commit f42ecafe974d2c6e1a3931ba27ebb5e56f382acb +Merge: 3242bfc0 22b7520a +Author: Dattatreya Majumdar +Date: Sun Oct 25 15:49:12 2020 +1000 + + Merge branch 'topic-recognition' of https://github.com/Dattatreya-45586327/PatternFlow into topic-recognition + +commit 3242bfc0b5e27dffbbedebf675b8af2e773c0cb6 +Author: Dattatreya Majumdar +Date: Sun Oct 25 15:48:29 2020 +1000 + + Functions for Loading ISIC data set + +commit 87523e61d550c5a53c48be74bf8bc1c122547687 +Author: Dattatreya Majumdar +Date: Sun Oct 25 15:29:20 2020 +1000 + + File Deleted + +commit 27b749cdfde399190aa68922aba61e3189daf985 +Author: Dattatreya Majumdar +Date: Sun Oct 25 15:22:45 2020 +1000 + + File for Loading ISIC data set + +commit 22b7520a2c9b1c989b6776fc872c4ed1c8f0d548 +Author: Dattatreya-45586327 <72792784+Dattatreya-45586327@users.noreply.github.com> +Date: Sun Oct 25 15:19:21 2020 +1000 + + Delete Datta_Lab_Report.ipynb + + Deleting Initial File + +commit 5082c817351a5c7f35d46ba02d7a5837298a4eab +Author: Matthew Costello +Date: Sun Oct 25 14:22:34 2020 +1000 + + Using zip instead of sequences + +commit 4e4c78c100729eccc8fb384892ea9a21dcfa9b18 +Author: Joseph Menesch +Date: Sun Oct 25 13:04:33 2020 +1000 + + Fixed predictions score bug + +commit 16e9bd417621ee5d54c5155e5d9883268d7b217e +Author: Matthew Costello +Date: Sun Oct 25 12:22:19 2020 +1000 + + Correct steps ber epoch for batch_size + +commit 4a0553acad55078227c07cd530e15975f91cb7d0 +Author: Matthew Costello +Date: Sun Oct 25 12:16:22 2020 +1000 + + Fixed layers_model return + +commit 6f90586c89c45c7991258450af6705988715d78c +Author: Matthew Costello +Date: Sun Oct 25 12:14:30 2020 +1000 + + Improved layers_model to allow for image processing testing + +commit 77ed598f75b709bebeb3fc3ec5634728f7d068cb +Author: Matthew Costello +Date: Sun Oct 25 10:45:21 2020 +1000 + + Updated training parameters + +commit fb2d9d973f8d42079dcf7aa8c5d98e627b5cd16e +Author: Ziyan +Date: Sun Oct 25 01:35:35 2020 +0800 + + Create the codes structures + Implementing image loader (load_to_tensor) - Finish + Testing the image loader - Pass + +commit 2e86fe46c8050323b95c09f9fa2ac143c37a706a +Author: Antoine Le +Date: Sun Oct 25 02:08:22 2020 +1000 + + removing old code for problem 1 and merging with current + +commit d282db7f147706ea10c4d4cbcc20604ab8b8469a +Author: Antoine Le +Date: Sun Oct 25 02:05:49 2020 +1000 + + adding DSC function, unet model, prediction method + from previous commit to problem 3 + +commit e34a4bd72b3acf8083fc64015775a9657968ce34 +Author: Matthew Costello +Date: Sun Oct 25 01:24:06 2020 +1000 + + Updated test_driver to include basic compiling, fitting, and evaluating + +commit 69ecf7a4ad519324e5b334dbdb01d57a5a129ae8 +Author: Matthew Costello +Date: Sun Oct 25 00:42:49 2020 +1000 + + Added keras sequence to join multiple generators together allowing for multithreading + +commit e113a128ad794944978c0c45af80bb34f1b214a7 +Author: Matthew Costello +Date: Sun Oct 25 00:20:41 2020 +1000 + + Improved data generators to check on lab pc + +commit bd6204c6c44718f45f5702f88ced589879846533 +Author: Antoine Le +Date: Sun Oct 25 00:08:33 2020 +1000 + + writing mapping function and visualising data + +commit 3d10f38a495b358a61e44d8281e9e8029deb4667 +Author: Matthew Costello +Date: Sat Oct 24 23:43:09 2020 +1000 + + Implementing data loading generators + +commit 40f2fcfd183c10a203b7123ba87c931316eb37c6 +Author: Declan Healey +Date: Sat Oct 24 23:17:42 2020 +1000 + + Created readme, model and driver files. + +commit eac38eb9f31d649cb667acfe45b7633e9fbeca4a +Author: Ziyan +Date: Sat Oct 24 21:14:18 2020 +0800 + + add readme, directory structure + +commit 1c6e6fe6a74a376e0b11e64947f1dbec37c720f1 +Author: Morgan Nierfeld +Date: Sat Oct 24 23:05:43 2020 +1000 + + Confirmed DSC with 5 epochs. Now need to add post training plots and complete a dice coefficient calc on all test images + +commit 003b51285bc6d66b862ef6d3a34128c4a8d58109 +Author: Antoine Le +Date: Sat Oct 24 22:12:15 2020 +1000 + + switching to problem 3, files import and splitting data + into train/data/test + +commit 65740a2d1dd527a481942e44f998b003b6f8e9ea +Author: Morgan Nierfeld +Date: Sat Oct 24 21:53:48 2020 +1000 + + The DSC function is now much mor efficient, need to confirm the display_predictions function + +commit 1755b0e48674aa7206dc7217cadbb87a1af3f7b5 +Author: s4354061 +Date: Sat Oct 24 21:05:04 2020 +1000 + + Trained another Unet with more epochs and smaller learning rate, made changes to the readme and added images of results + +commit e8b5de63d7feb7029f5ef471e98834938ce015c2 +Author: Matthew Costello +Date: Sat Oct 24 20:25:10 2020 +1000 + + Modify gitignore to exclude data set + +commit fb5ac4fedf10e8fa7cee7fcb1cceac67b70149d2 +Author: Antoine Le +Date: Sat Oct 24 19:00:56 2020 +1000 + + Added unet model, DSC metric and fixed autoencoder issues + +commit 95e1a5157cb95223b1f577be6ddb421eef53ee1a +Author: 1665446266 <423618563@qq.com> +Date: Sat Oct 24 16:54:50 2020 +0800 + + Neural network parameters file + +commit cbac2f79d1b9700878790be72c9bbf82b173b77b +Author: Morgan Nierfeld +Date: Sat Oct 24 18:18:43 2020 +1000 + + reduced the number of filters by a half and reduced the batch size, this appears to prevent overfitting of data and the model collapsing. Now achieving a DSC above 0.8 for both layers. Will need to test on more images however. + +commit c4033ac864b6397b1270331b48e02f9b87be4122 +Author: Morgan Nierfeld +Date: Sat Oct 24 16:26:42 2020 +1000 + + something is broken with my ISIC :( Returning back to working vesrsion + +commit d03fa1f2707e6843641f8e60d3b390c5edac8273 +Author: Erik Brand +Date: Sat Oct 24 16:08:58 2020 +1000 + + Updated driver to work with new utils, GAN is deep with no extra conv - works very well + +commit b7582e79b68f155608cac53cccca21756b176790 +Author: Erik Brand +Date: Sat Oct 24 16:05:02 2020 +1000 + + Moved plotting functions to DataUtils, added test data generator, ssim calculator + +commit 8d047abb14a67e601652f3cfbba389499ffe4604 +Author: Matthew Costello +Date: Sat Oct 24 14:48:37 2020 +1000 + + Set up initial file structure + +commit 147d3cb4dc1115c9dd694cd83e11b073fac755e8 +Author: Erik Brand +Date: Sat Oct 24 14:41:23 2020 +1000 + + Added plotting functions, removed numpy, good results 128x128 deeper but less filters + +commit e8e90a053a9454653a7494031c33d853c41e0fb6 +Author: Joseph Menesch +Date: Sat Oct 24 11:29:56 2020 +1000 + + Updated model with regularizers and fixed predictions + +commit 8d8ff79a65936c57e68c2bf9df72b8c4068553e1 +Author: Zachary Oar +Date: Sat Oct 24 10:25:14 2020 +1000 + + Added a keras Sequence to generate images as batches for training, added onehot encoding, added a sanity check + +commit 0bc111cc0e8ef7a00fcfb6e6e5900f43de6f37df +Author: Zachary Oar +Date: Sat Oct 24 10:10:28 2020 +1000 + + updated gitignore file to ignore image folders + +commit 3b4a318933ff52965345d0c72458acfb9335b197 +Author: Donghong Zhuang <847345413@qq.com> +Date: Fri Oct 23 19:00:49 2020 +0200 + + initial commit + +commit 79693205d150b82d5a796ef828537cb227282e65 +Author: xiaosun_UQ +Date: Fri Oct 23 22:58:55 2020 +1000 + + Implement a draft version of Improved UNet model, not yet finished and without evaluation + +commit 88025f5ef3f794af0a2ff71326b0b7f431691569 +Author: xiaosun_UQ +Date: Fri Oct 23 22:55:52 2020 +1000 + + Load image data and convert data into tf DataSet variable, and then split whole input/mask data into train/val/test + +commit 5eaf4befc011f45aa06cdca9aad00135cc7a8d0f +Author: xiaosun_UQ +Date: Fri Oct 23 22:53:39 2020 +1000 + + create a ipynb file to work with (I re-commit my 5 commits together). + +commit f28a789aa00a4a43d13fe8a4c66fe621dedb1051 +Author: xiaosun_UQ +Date: Fri Oct 23 22:50:02 2020 +1000 + + This is my first commit, create my workspace folder and a README.md file + +commit faac3dd8bedcdf46cdc95cdee0936747e6d35f4e +Author: Zachary Oar +Date: Fri Oct 23 22:12:30 2020 +1000 + + Added imports and loading image filenames + +commit c816061b0ed61fe39d1f951e37a4b6365e23b38b +Author: Wen-Hao-18 <72903196+Wen-Hao-18@users.noreply.github.com> +Date: Fri Oct 23 20:11:26 2020 +0800 + + Create Wenhao-AKOA + +commit 287ca7c4e61c822fbbd740ebe35b303112f1403a +Author: Zachary Oar +Date: Fri Oct 23 18:13:03 2020 +1000 + + Initial commit, forked repo and added blank model file + +commit ab961d72dd46a347cf5c35cc542dfba273db1ecc +Author: Joseph Menesch +Date: Fri Oct 23 18:06:55 2020 +1000 + + Added prediction score on test set + +commit 84cad0c29f633c2d1016c9c8002a563139c690b6 +Author: Anna LYU +Date: Fri Oct 23 17:05:54 2020 +1000 + + commit again + +commit c749c3c555a082c77d01c20d7760b0fd39a10a65 +Author: Theo Duval +Date: Fri Oct 23 16:47:07 2020 +1000 + + Added a file discriptor to each py file at the top + +commit a27205baa1b9ca158075b05c3a8d0cd018708b49 +Author: George Mulhearn +Date: Fri Oct 23 15:19:09 2020 +1000 + + general formatting + +commit 64259614b7177532f80ead92819795760b1c2304 +Author: Morgan Nierfeld +Date: Fri Oct 23 14:06:20 2020 +1000 + + loaded the training paths and split the data into train, validate and test + +commit 5e5283c7dd54de2599e13a223390d7f76b4b2c26 +Author: unknown +Date: Fri Oct 23 13:54:02 2020 +1000 + + diceCoeffErrorFixed + +commit 10580e5a09f2a86e21fc06a8f9985726f0a0563e +Author: MajorRedux +Date: Fri Oct 23 14:42:31 2020 +1100 + + utility functions for report + +commit 49c3204373fffa9010c9583723dbe3f8ba0d7ed4 +Author: Anna LYU +Date: Fri Oct 23 13:29:41 2020 +1000 + + Initial commit of test.py script + +commit 8e93a132857ff4bed8c37e14bf55f6e30907c94b +Author: MajorRedux +Date: Fri Oct 23 13:45:09 2020 +1100 + + data checking + +commit e7233c7375d9cd6919f736748d2f466606305fad +Author: MajorRedux +Date: Fri Oct 23 13:32:12 2020 +1100 + + Updated parameters and function to load data set + +commit f4b95c026b61e2b739ee7508afca633bfc8c2136 +Author: Erik Brand +Date: Fri Oct 23 12:30:58 2020 +1000 + + Converted to 128x128 working well + +commit 682d592b6bc83e35aff3612abfd000ab1df0031b +Author: Joseph Menesch +Date: Fri Oct 23 11:54:01 2020 +1000 + + Fixed undoing one-hot (softmax to sigmoid) + +commit 7fcc3e59cec7c6854db92f77e6323eb1792fafe6 +Author: Morgan Nierfeld +Date: Fri Oct 23 11:33:15 2020 +1000 + + Implemented Leaky Relu, DSC is 0.9, task 1 is now complete. Now starting task 4 with the ISIC dataset. + +commit 05fa160db6b168fdd0d5a1a76c57b6a7607f5da8 +Author: MajorRedux +Date: Fri Oct 23 11:57:02 2020 +1100 + + Moving file, creating new folder + + Relocating and creating new file structure + +commit 46f76ce75d2338b02c4cff34a200b80f262a412c +Author: MajorRedux +Date: Fri Oct 23 11:51:45 2020 +1100 + + Initial commit: Mounting google drive + +commit 737e23078da46ef09cd16dbb339cdcf7e6e38016 +Author: Theo Duval +Date: Fri Oct 23 10:47:18 2020 +1000 + + Changed way of saving model so that I can reload them + +commit 7117448146085dd5a891dc179cdc49072b6a7679 +Author: MajorRedux +Date: Fri Oct 23 11:46:52 2020 +1100 + + Delete lab_demo_2.ipynb + + Testing file deletion + +commit bea8349a71cb391aa1a8c3463216db78fa2f9d1d +Author: Joseph Menesch +Date: Fri Oct 23 02:15:27 2020 +1000 + + Made model calling and label encoding more efficient + +commit fd9c52dbbec4415fa3b7fe65655d54485f843398 +Author: Vincentius Aditya Sundjaja +Date: Fri Oct 23 00:04:55 2020 +1000 + + Made progress on the normal unet. Predicted image looks good + +commit f818dac0a71892b59ced86683cc7ab324bf40eca +Author: Antoine Le +Date: Thu Oct 22 23:25:57 2020 +1000 + + Initial pre processing written and files reading + +commit 55c39be4470d60f67cc16797196013d8c545853d +Author: peterngo901 +Date: Thu Oct 22 19:43:56 2020 +1000 + + imported necessary packages and setup barebones pipeline + +commit 1c48785ee6aa04b92b2856f247036d44d48a0629 +Author: s4354061 +Date: Thu Oct 22 17:59:14 2020 +1000 + + Split driver.py into two independently working driver scripts. Modified segment.py CustomSequence class to train on all images, ones that didnt fit into a complete batch are now used + +commit 0857dedaebcf7f77ff9b74f95bd614bf1f51935d +Author: Theo Duval +Date: Thu Oct 22 17:08:05 2020 +1000 + + Small updates to README + +commit 1a8f620387883ec5a18a5b994700f80c395d8340 +Author: Theo Duval +Date: Thu Oct 22 16:37:37 2020 +1000 + + Added most of the body to README.md + +commit 67542f02939d08f242be3575c71d2cbfd59d8c1f +Author: Erik Brand +Date: Thu Oct 22 16:21:40 2020 +1000 + + Working well with 64x64 + +commit b62cf5a564e9cbeb4e203effdb209afa0f6e14a3 +Author: Erik Brand +Date: Thu Oct 22 15:20:27 2020 +1000 + + Bug fixes to get running 64x64 + +commit 7fddd18b869a193b999997adf8eab5b9fed0ca78 +Author: unknown +Date: Thu Oct 22 14:32:08 2020 +1000 + + diceSimilarityImplemented + +commit 6de318c345c321d892d8ea2c63b15b07a7db2aeb +Author: unknown +Date: Thu Oct 22 13:08:02 2020 +1000 + + improvedUnetImplemented! + +commit 5b95c6bf5a767dafe288c5cc4f00270314d7a55b +Author: Shekhar S. Chandra +Date: Thu Oct 22 11:33:33 2020 +1000 + + Completed MNIST infoVAE, working correctly. + +commit 021871b772476786eccfa822e7c95480eae6af75 +Author: Shekhar S. Chandra +Date: Thu Oct 22 11:19:19 2020 +1000 + + Added training and working with latent space. + +commit 2866160f288c1b4e0edf6fc76109e0b4127e6ca6 +Author: Shekhar S. Chandra +Date: Thu Oct 22 10:57:10 2020 +1000 + + Added layers module and networks to script. + +commit 95b4cd9f433e51764cca9fcd098e9ef6a67c9c2f +Author: Siddharth Uniyal +Date: Thu Oct 22 10:49:25 2020 +1000 + + added data preprocessing and model training + +commit 85b2a9c899cfa4748af1d70995a20575cd00cf64 +Author: Joseph Menesch +Date: Thu Oct 22 10:42:16 2020 +1000 + + Trained 100 epochs + +commit 7d8a326601bb755ad54864e44901abd8d8575cda +Author: Shekhar S. Chandra +Date: Thu Oct 22 10:25:58 2020 +1000 + + Added MINST load functionality + +commit a8a2e55b43f492f446ac286cf2b739b9b3b92771 +Author: Shekhar S. Chandra +Date: Thu Oct 22 10:19:13 2020 +1000 + + Initial commit of InfoVAE test script. Mostly empty. + +commit f33e4955284f08ee39c493eb07cb346d004988af +Author: Joseph Menesch +Date: Thu Oct 22 08:59:32 2020 +1000 + + Added segmentation layers + +commit f95cb31ded221fce4bf79a56a49ccad4d54b25a5 +Author: Joseph Menesch +Date: Thu Oct 22 08:12:07 2020 +1000 + + Added compiling, training and evaluating + +commit 6939cae6db0a9fdb93907b76f224c5870c99c515 +Author: Joseph Menesch +Date: Thu Oct 22 06:13:49 2020 +1000 + + Updated model decoder + +commit 36aadc951eeafccac2be7272c17cad598b3baebe +Author: Joseph Menesch +Date: Thu Oct 22 05:21:25 2020 +1000 + + Updated model encoder + +commit ad1425d9f9209b6a90287a077ffe9bb601d9034d +Author: Joseph Menesch +Date: Thu Oct 22 02:49:58 2020 +1000 + + Fixed label pre-processing + +commit d9ac97078d58e7f170bca2e341f954e0315690fd +Author: Vincentius Aditya Sundjaja +Date: Thu Oct 22 00:00:38 2020 +1000 + + finished the normal unet model and tried training + +commit 653115d65c718213b2e9142b2461fb31078fdb88 +Author: Joseph Menesch +Date: Wed Oct 21 22:27:54 2020 +1000 + + Added validation set and fixed channels + +commit b28af35805c746864bae508941cb09b15c2aba61 +Author: peterngo901 +Date: Wed Oct 21 22:24:10 2020 +1000 + + DCGAN Paper Details + +commit 36513239960f743cfe8c4d2099d927be15117bbf +Author: Theo Duval +Date: Wed Oct 21 20:00:54 2020 +1000 + + Fixed an issue in generating samples + +commit 4f80529b731ed1e0a7e0a15d26799b72e740c0ee +Author: ArunHarish +Date: Wed Oct 21 17:44:05 2020 +1000 + + Converted the workout into py notebook. Managed to import train dataset. + +commit 6c1136ad9d3c07c31e83dc7d221b83bce6fe2249 +Author: Joseph Menesch +Date: Wed Oct 21 16:52:46 2020 +1000 + + Updated pre-processing and started building model + +commit 003ce7ea7ef54cf10c219a885090312fda707a19 +Author: George Mulhearn +Date: Wed Oct 21 15:44:52 2020 +1000 + + added extremely simplified model for testing/comparision purposes + +commit fd587f13039b94201ec2162b6fc43bc25b01194e +Author: George Mulhearn +Date: Wed Oct 21 15:17:35 2020 +1000 + + model tweaked and extra methods for validation accurary checking/visualisation added + +commit a908f5165a376264ab4a0d45ae806259a7baefa3 +Author: danielzhangau <740807262@qq.com> +Date: Wed Oct 21 14:33:51 2020 +1000 + + add evaluation method jaccard index + +commit d11718084714ab38e37a8986baa3824f6186cdbe +Author: George Mulhearn +Date: Wed Oct 21 14:30:10 2020 +1000 + + initial model build, validation seems ok, needs tweaking + +commit f1e1007480b834ae217bdf8d8e6e966583475f5e +Author: George Mulhearn +Date: Wed Oct 21 14:00:57 2020 +1000 + + made image dataset array more efficient such that no memory errors occur on uq lab computers + +commit 4faa8962530a33090dfd0e535f2a6e5546f86f89 +Author: danielzhangau <740807262@qq.com> +Date: Wed Oct 21 13:28:12 2020 +1000 + + add comment to my code + +commit 941a240ce04dc24fcb07c56bdd82220d280ecbd1 +Author: Reece Jocumsen +Date: Wed Oct 21 13:23:29 2020 +1000 + + Increased definition of final images from 64x64 to 128x128 + +commit c663ac63b5357d46ccde1c065c926c0b79ee84a4 +Author: danielzhangau <740807262@qq.com> +Date: Wed Oct 21 12:47:11 2020 +1000 + + update description as well as add approch to evaluation + +commit b2893077e9c2bc4b5bf92e6dc3d2399341796cdc +Author: s4354061 +Date: Tue Oct 20 22:48:45 2020 +1000 + + Making minor changes to results function in segment.py to better display results from evaluation of models. Started the documentation in the README.md file + +commit 02701e77fa97391d0de4d6d85efc8c55e1ee9bf6 +Author: Vincentius Aditya Sundjaja +Date: Tue Oct 20 20:32:26 2020 +1000 + + loaded the data + +commit 3bea5a5d956ca52e8dc2679761d81b374982d348 +Author: ArunHarish +Date: Tue Oct 20 20:11:27 2020 +1000 + + Just downloaded the dataset of OASIS and ignored that file from git repo. + +commit 703e4c00e910d34d7dac6889759234c9c15abb62 +Author: Erik Brand +Date: Tue Oct 20 19:18:02 2020 +1000 + + Added driver script + +commit 1c304f1035c43f96802d4a2cae4f4c82bf40bf6a +Author: Reece Jocumsen +Date: Tue Oct 20 19:07:41 2020 +1000 + + Created main.py, implemented GAN from Demo 2 with slight adjustments + +commit 395bb7aa9bd14e61a7e185d8f605c7c635ddc068 +Author: unknown +Date: Tue Oct 20 17:20:44 2020 +1000 + + modelProgress + +commit 50e56087020960d4a5cbba93db0b8a3c482c7112 +Author: Erik Brand +Date: Tue Oct 20 16:34:36 2020 +1000 + + Added main training function (Repurposed from Lab2) + +commit 6188ec735b20d29f28a7d5261f971211fc5fb550 +Author: Erik Brand +Date: Tue Oct 20 16:12:02 2020 +1000 + + Created dataset loading function + +commit 4f4e3f40f500136f91708cd055cf09883ccfc155 +Author: unknown +Date: Tue Oct 20 15:56:20 2020 +1000 + + buidingmodel1 + +commit 960081fce5526571a2a396d7d2025b68c060bfd3 +Author: Erik Brand +Date: Tue Oct 20 15:54:59 2020 +1000 + + Defined losses + +commit 2629f60acca0db22d31140785c2dc92fbaddeccc +Author: Erik Brand +Date: Tue Oct 20 15:34:15 2020 +1000 + + Defined Generator and Discriminator (Taken from Lab2) + +commit 3389b20945a7247c81a06fd0a4761f56106041a9 +Author: Wenjun Zhang +Date: Tue Oct 20 15:25:44 2020 +1000 + + data preprocess + +commit e4aea86a0ddbc9f17473839c3882b291bc4eada2 +Author: Max Hornigold +Date: Tue Oct 20 14:03:46 2020 +1000 + + Data loads in correctly + + Modified the driver script so that the data gets downloaded correctly + +commit 596407feafe0ff520c8ba5f0659dfaaac7ff59cb +Author: Antoine Le +Date: Tue Oct 20 12:18:15 2020 +1000 + + Created driver and model script and folder for problem + +commit c33f13094355ad9bb85ffe36ce1bbf59c3b64c84 +Author: MajorRedux +Date: Tue Oct 20 12:07:34 2020 +1000 + + testing + +commit 439afad8e85aab0b038c7c0429810634ccccd7fb +Author: MajorRedux +Date: Tue Oct 20 11:56:38 2020 +1000 + + testing + +commit 0b98d2f5919c08793332b71e3356277012d258ec +Author: MajorRedux +Date: Tue Oct 20 11:51:58 2020 +1000 + + Created using Colaboratory + +commit 2c330e116c70f1b11c95242389002fa8547eac66 +Author: Vincentius Aditya Sundjaja +Date: Tue Oct 20 11:38:28 2020 +1000 + + started the report + +commit 9dfd2f2a91ab22879f4725f59b1b4192d109ef40 +Author: Theo Duval +Date: Tue Oct 20 11:19:09 2020 +1000 + + Changed program to resize images to (64,64), this is because of hardware limitations + +commit 033a11b8b06ba2964aa558ce7d98417519efe98c +Author: Theo Duval +Date: Tue Oct 20 10:20:34 2020 +1000 + + Added training step and loop + +commit 071cc6d55ff6d6813195cc3b1ea91e7c105b58d4 +Author: Kareem Kharoub +Date: Tue Oct 20 07:20:41 2020 +1000 + + testing connection with remote repo + +commit 4ce4c599e3d6dac203f0493817b61ae4ff8b6311 +Author: s4354061 +Date: Tue Oct 20 06:52:48 2020 +1000 + + Commented the segment.py file and have run a training on a Unet model for 100 epochs , resulting in an average dice coefficient similarity of greater than 0.9 + +commit d70011a2daae774cfe26b0c054188290929ec3f7 +Author: Joseph Menesch +Date: Tue Oct 20 03:23:14 2020 +1000 + + Loaded and pre-processed data + +commit ebecf6b1e5d09f5c62fd003b0445b54d3447259f +Author: Joseph Menesch +Date: Tue Oct 20 02:12:36 2020 +1000 + + Initialized scripts + +commit 9ac4c78844d1af29b75876eaea74b4a5f4ea628b +Author: s4354061 +Date: Mon Oct 19 22:33:00 2020 +1000 + + Created an example driver file that can train and save a model, in addition to loading in a re-trained model, both cases it shows results and dice similarity coefficients, retesting with 100 epochs + +commit 7db96c798f0cb780d8a76b22d452e6249fcf6665 +Author: Theo Duval +Date: Mon Oct 19 19:12:02 2020 +1000 + + Fixed the output of the generator so that it generates an image, added an additional convolutional layer as well + +commit 67e0a03833ce5fa91b1782bf05d5a4076d0dc43d +Author: Theo Duval +Date: Mon Oct 19 18:57:02 2020 +1000 + + Fixed typo + +commit ada54ddb2793bf4b73150301f3636b053011e206 +Author: Theo Duval +Date: Mon Oct 19 18:35:18 2020 +1000 + + Began the main training file, includes functions to load data and save results. + +commit 4564a2a5a67e299524667a4ed2df4f59b6923275 +Author: Theo Duval +Date: Mon Oct 19 17:13:54 2020 +1000 + + Wrote the discriminator model + +commit 310f12b0c5fcb41d138a5abe1414d05ca11aa629 +Author: Theo Duval +Date: Mon Oct 19 16:30:49 2020 +1000 + + Wrote the generator model + +commit cf9c33b53213d3cf0c3f9ca155b67a96ab7adcb9 +Author: s4354061 +Date: Mon Oct 19 15:17:44 2020 +1000 + + Transcribed work from notebook segment_ISIC.ipynb to segment.py and now testing to see if functions work in a driver script + +commit 65e0f78fafb1715c9687829a133d8ced5c802714 +Author: Samuel Bethune +Date: Mon Oct 19 10:56:48 2020 +1000 + + created personal folder, added yml file + +commit e3e83076dc7648e986310be15261b013c9a9a9cb +Author: s4354061 +Date: Mon Oct 19 01:03:58 2020 +1000 + + Made adjustments to notebook file to save and load model's, now to test with large epoch size of 100 + +commit 0d69ba7e97646fe2e2b17b91f6457b28e6a57b40 +Author: s4354061 +Date: Sun Oct 18 23:06:12 2020 +1000 + + Adding .ipynb file used to test code + +commit 807861c1216efd168bb70f539cd54915572b4663 +Author: s4354061 +Date: Sun Oct 18 23:05:23 2020 +1000 + + Successfully training CNN with ISIC dataset, img_size is (256x256), results in approximately 90% dice similarity coefficient + +commit 878ac7ee6dc3016340fbc427e7f51f298c2ede20 +Author: Siddharth Uniyal +Date: Sun Oct 18 22:59:50 2020 +1000 + + Generator and Discriminator Architecture Created! + +commit 485441eb87f3c0bf2f4ba744429a0b7f1480e49a +Author: Joseph Menesch +Date: Sun Oct 18 22:12:06 2020 +1000 + + Initial commit + +commit 0f1fe63909a6daf0abf4696b68f45b3a58e0a9e4 +Author: Morgan Nierfeld +Date: Sun Oct 18 19:23:37 2020 +1000 + + Completed task 1, now have a working improved unet that appearst to have Dice coeff above 90, need to confirm with tutors + +commit d980c7cdd11874c4ad1a0ece7698c4ec7ff2bf11 +Author: Sid-Uniyal <72907292+Sid-Uniyal@users.noreply.github.com> +Date: Sun Oct 18 17:21:36 2020 +1000 + + Create README.md + +commit cc7e9512ce1441ccaf57c78154b119a7ba7be182 +Author: danielzhangau <740807262@qq.com> +Date: Sun Oct 18 17:08:51 2020 +1000 + + make predictions and plot the origin img mask then predicted mask + +commit 4b7e7fae1509ab9772a4063817702e569c5250bd +Author: danielzhangau <740807262@qq.com> +Date: Sun Oct 18 17:01:50 2020 +1000 + + train the model by batch, got final accuracy 0.9355 + +commit 9ad61ba89ce312388dbf93d3e9d727894077b740 +Author: danielzhangau <740807262@qq.com> +Date: Sun Oct 18 16:39:40 2020 +1000 + + compile model successfulls + +commit 92e12accce39521c677a2a2f5bf30ba881e0a84f +Author: Morgan Nierfeld +Date: Sun Oct 18 16:34:16 2020 +1000 + + DSC appears to be working + +commit 5f190ca2f724eb743b8f5f1689c4f796b0be145c +Author: Morgan Nierfeld +Date: Sun Oct 18 14:39:59 2020 +1000 + + Added previous unet making sure preprocessing is working, now checking dsc + +commit 2cff93397e7956396ccdaf0d86000461675bbac5 +Author: Morgan Nierfeld +Date: Sun Oct 18 13:09:33 2020 +1000 + + Starting writing up the old unet model to begin testing with + +commit 57f3d0df138407c3aa5f37efda6593c7343ebc89 +Author: s4354061 +Date: Sun Oct 18 12:34:31 2020 +1000 + + Started to work on the source code that the driver script will eventually make calls to, in addition to experimenting with the ISIC data set in jupyter notebook using the *.ipynb files added + +commit 75b02c3a35f0ad64e20495ec98b995d84c35b10d +Author: ArunHarish +Date: Sun Oct 18 08:56:04 2020 +1000 + + Added my student number just in case to identify my solution. + +commit 63da0127dab9e52694145fe60ce21c72c931f053 +Author: ArunHarish +Date: Sun Oct 18 08:44:32 2020 +1000 + + Added python env and tf library. + +commit fa362f0b2abe237b54d2d9f56c9ba25343633c9c +Author: Morgan Nierfeld +Date: Sat Oct 17 22:40:51 2020 +1000 + + transfered the images into datasets + +commit f221881ebea6b23028345a56675d0f7d42ed3651 +Author: danielzhangau <740807262@qq.com> +Date: Sat Oct 17 17:08:04 2020 +1000 + + rewrite unet into blocks + +commit 2d27365202031d526581c0ed98aa94cb69442229 +Author: Morgan Nierfeld +Date: Sat Oct 17 15:02:36 2020 +1000 + + Initial commit + +commit b900c1d97fa08aeb18aa3514055dfce6a63514cf +Author: George Mulhearn +Date: Fri Oct 16 17:39:06 2020 +1000 + + solved previous image labelling issue + +commit 600f4375c96735ff25a4bdbf2ae1763e910c4e5c +Author: George Mulhearn +Date: Fri Oct 16 17:23:08 2020 +1000 + + loading and visualing image dataset complete, however slight issue with identifying label from file name + +commit fcde48a3c4f203c9c2eb7f0da1c85dd82f0f5341 +Author: danielzhangau <740807262@qq.com> +Date: Fri Oct 16 16:02:47 2020 +1000 + + remove the folder with name have space (was the initial folder) + +commit 6282d762ed193f99f809d913597b1b7dc3d15a76 +Author: George Mulhearn +Date: Fri Oct 16 15:54:48 2020 +1000 + + basic skeleton :skull: for load_images + +commit aa5fdd5e29024b8279171ab8377c439a7690e8f1 +Author: danielzhangau <740807262@qq.com> +Date: Fri Oct 16 15:50:37 2020 +1000 + + use intial structure of unet from demo2part2 + +commit bef4ee796e6c99e75775726e7b0676d8b54733cf +Author: danielzhangau <740807262@qq.com> +Date: Fri Oct 16 13:54:32 2020 +1000 + + write description of task and able to load dataset + +commit 04fa97252c00aa7f8df3c424bdcc5bcfbf83f052 +Author: s4354061 +Date: Fri Oct 16 13:24:51 2020 +1000 + + Added code to read the ISIC dataset, now to seperate into training, validation and test sets + +commit 779d0d8d0dfb8a8e5a8786ebdfb190bea8bb7728 +Author: George Mulhearn +Date: Thu Oct 15 19:24:27 2020 +1000 + + initial file set up for selected problem + +commit 0f6f1fb396168bfd72682c85884522f173c768a1 +Author: George Mulhearn +Date: Thu Oct 15 19:12:36 2020 +1000 + + picked topic to focus on first :tada: + +commit a560c41452b09a140567d34c43c5a3542efc2158 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Oct 15 16:37:37 2020 +0800 + + upload 'predict.ipynb' + + This file records the prediction results. + +commit fdd0d1d7ea2fa37a80026861018c2e5a982a87c6 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Oct 15 16:35:42 2020 +0800 + + prediction + + 1. load 'trained_model.h5' file + 2. use test dataset to make the prediction + 3. the accuracy is 90.4% + +commit 1a7c739c67edd086ea1448620340a34fac147c9c +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Oct 15 16:27:49 2020 +0800 + + upload 'bulid model.ipynb' + + This file records the results of training. + +commit 2ee5ccb8a9fba5b947bd190dd4aa18c34c8dfc40 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Oct 15 16:24:37 2020 +0800 + + Updata : the code of building model + + 1. Build the training model and save the trained results and model as h5 files. + 2. Plot loss and accuracy curves of the training of method. + +commit 45099fe93095bffcd85d030286c2bc32d73c22c8 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Thu Oct 15 16:13:43 2020 +0800 + + Create README.md + +commit 08d773cc8e541cb63c7bbd961ee1bbddef9087e6 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Wed Oct 14 19:52:32 2020 +0800 + + upload split dataset.ipynb + +commit 083d88d0d1ba180f5a880bc2f96d7c26a8e2c077 +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Wed Oct 14 19:47:04 2020 +0800 + + Update README.md + + Updata: code (split dataset into training, validation, test dataset) + +commit 3504043908f9ec0a53e70de0704234a6be4ddbac +Author: 1665446266 <55136681+1665446266@users.noreply.github.com> +Date: Wed Oct 14 19:19:10 2020 +0800 + + Create README.md + +commit 9ba3e38ca5254a570c26c25fe4e7514b4b123064 +Author: peterngo901 +Date: Wed Oct 14 19:46:28 2020 +1000 + + setup main + +commit cdc82c4c907a0baa1094d26d64b6f410f61dd6c2 +Author: peterngo901 +Date: Wed Oct 14 19:31:18 2020 +1000 + + Problem Description + +commit 2d9c3ee146921092a376c0403c9700e20275645f +Author: George Mulhearn +Date: Wed Oct 14 18:15:01 2020 +1000 + + updated gitignore to ignore pycharm project folder/config :zap: + +commit 14d9aeb9501d70d94a9d27b1de1af23f83ee79cd +Author: George Mulhearn +Date: Wed Oct 14 18:07:30 2020 +1000 + + initial directory and file set up :tada: + +commit c6bc5d9152e4a08fba22fe3bec2ee38f9c718424 +Author: Dattatreya Majumdar +Date: Wed Oct 14 16:13:59 2020 +1000 + + First Line of code + +commit 73ae7fc4c9f66a7c73134d26275a1ab8637264c3 +Author: Md Abdul Bari +Date: Wed Oct 14 16:06:10 2020 +1000 + + first line of code + +commit cdf80266cf34e5bd29f1661b8b88cc648bf0f1ca +Author: danielzhangau <740807262@qq.com> +Date: Wed Oct 14 16:00:40 2020 +1000 + + initial folder + +commit 2cb05a7bb7a5c929311dc74ef9e4533e948e84d9 +Author: Md Abdul Bari +Date: Wed Oct 14 15:56:49 2020 +1000 + + First line to readme.md file + +commit 10d7447753a7ba3489c6c78f596fafc0b0d95c5f +Author: Dattatreya Majumdar +Date: Wed Oct 14 15:34:01 2020 +1000 + + README + +commit b9687e8fc2cfd193b42f16d7f514815c044673be +Author: Isabel Peters +Date: Wed Oct 14 15:21:51 2020 +1000 + + Directory and ReadMe setup + +commit b43fc8cd4f5fa18c334ae094f611d85647bc5241 +Author: unknown +Date: Tue Oct 13 16:03:22 2020 +1000 + + start + +commit d340b7a15556d64a097602bbcdd13bd0bf2d5035 +Author: s4354061 +Date: Tue Oct 13 15:11:18 2020 +1000 + + first commit, addeda README.md file + +commit 2f7f2c8224a799950fd2aa42b34300ee2d4d9fba +Author: Max Hornigold +Date: Tue Oct 13 12:58:07 2020 +1000 + + Structured solver and driver scripts + + Have structured a template for how I want to write both solver.py and driver_script.py + +commit bcbf20a1a5043ef2602ff9947681be89d4084862 +Author: Max Hornigold +Date: Tue Oct 13 11:57:35 2020 +1000 + + Added Problem Folder + + Added a folder to write my solution to the recognition problem in. + +commit 05ed63e5b4159db0002ce1732ff43de1184b4a7e +Author: Shekhar S. Chandra +Date: Mon Oct 12 10:11:10 2020 +1000 + + Added the recognition branch and folder to 2020 projects. + +commit 70b1f5473d359370947e4d6516b8168453080455 +Author: Shekhar S. Chandra +Date: Mon Oct 12 10:03:11 2020 +1000 + + Removed troublesome file from repo + +commit d22d305b657d94b0f41b36d8bd0813db14e481ea +Author: Shekhar S. Chandra +Date: Mon Oct 12 10:01:05 2020 +1000 + + Cleanup: Moved remaining algorithms to algorithms folder. + +commit 795addf36ba42231d493a6a2aa2d9241a7dacc3f +Author: Shekhar S. Chandra +Date: Mon Oct 12 09:57:30 2020 +1000 + + Cleanup: Began moving algorithms into its own folder + +commit f7cf3e8868d7f646eec265b27954c50c926b5a28 +Merge: c4ad3454 f5c7b773 +Author: Shekhar S. Chandra +Date: Mon Oct 12 09:54:28 2020 +1000 + + Merge branch 'master' into topic-algorithms + +commit c4ad3454b8996e3acedaa6a73d78e569d0d04162 +Merge: d2aa187d b48aaff6 +Author: Shakes +Date: Tue Nov 19 00:01:05 2019 +1000 + + Merge pull request #71 from Lynn-Dai/master + + Final version of the assignment file of 46011424 + +commit d2aa187dff7185f0806b691c180d901895abcc6c +Merge: cff720be 24a840c5 +Author: Shakes +Date: Mon Nov 18 23:54:52 2019 +1000 + + Merge pull request #64 from coppers-j/topic-algorithms + + Topic algorithms - CLAHE + +commit cff720be470e5211b510a16157fbb1d503d3bda3 +Merge: 7e70aa78 7f95abb3 +Author: Shakes +Date: Mon Nov 18 23:52:54 2019 +1000 + + Merge pull request #29 from QijiangYao/topic-algorithms + + Algorithms report - Histogram + +commit 7e70aa787a8a75bce2545e3f63a6eb0d0507632a +Merge: 078d102a a8a52e15 +Author: Shakes +Date: Mon Nov 18 23:48:57 2019 +1000 + + Merge pull request #63 from somebody1234/topic-algorithms + + Add radon transform + +commit 078d102a6b6c81714e60b7ca830c019a0fb74145 +Merge: bb199053 37f18787 +Author: Shakes +Date: Mon Nov 18 23:40:10 2019 +1000 + + Merge pull request #62 from craigdeng/topic-algorithms + + Topic histogram by s4443048 + +commit bb19905392c359da03d2c46b1fa0cb05ebf80f5d +Merge: dc5b0afb 737e0640 +Author: Shakes +Date: Mon Nov 18 23:38:20 2019 +1000 + + Merge pull request #46 from satrfall6/topic-algorithms + + Topic algorithms - TV denoise + +commit dc5b0afb8b10e9f067fa2608b8a26d2638acd080 +Merge: ac0b3c5e 03589170 +Author: Shakes +Date: Mon Nov 18 23:34:40 2019 +1000 + + Merge pull request #32 from iciac/topic-algorithms + + Topic algorithms - 42370057 algorithms + +commit ac0b3c5e6ec84fabd4fbe134de236fa021d2d490 +Merge: 364a075f d0544ad5 +Author: Shakes +Date: Mon Nov 18 23:32:56 2019 +1000 + + Merge pull request #28 from LeoYez/topic-algorithms + + Topic algorithms - Histogram - J.Y. + +commit 364a075fdca13eb84ea40233e3142bbd334dca16 +Merge: 89980881 c036ac6d +Author: Shakes +Date: Mon Nov 18 23:30:29 2019 +1000 + + Merge pull request #51 from rnvikram/topic-algorithms + + Topic algorithms- exposure(rescale_intensity) + +commit 24a840c5abfb9414895f93c40fd76c1cd2265ce8 +Author: coppers-j +Date: Fri Nov 8 16:48:53 2019 +1000 + + Changes made as per feedback on PR + +commit 37f18787fba432891ef0ba6ff35a0545b012f2ad +Author: craigdeng <53163106+craigdeng@users.noreply.github.com> +Date: Fri Nov 8 14:12:49 2019 +1000 + + Add header Block, add add inline comment + + 1. add header as request + 2. add and modify some inline comment as request + +commit 7f95abb3627874a41f21acb1fd5267571397cad0 +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Fri Nov 8 13:57:20 2019 +1000 + + Update README.md + + Correct the link of image + +commit 4638d136d81a454cbd2a8985d03a56525a48d644 +Author: craigdeng <53163106+craigdeng@users.noreply.github.com> +Date: Fri Nov 8 13:47:20 2019 +1000 + + Delete .Ds_Store + + Feedback required. Remove unnecessary files + +commit a8a52e15c30c83b380bb474dccb9b33f82ec4efb +Author: E-Hern Lee +Date: Thu Nov 7 16:23:26 2019 +1000 + + Update radon.py + +commit 4eeb4f4051efefdf7516d01342f4ca44051100a4 +Author: E-Hern Lee +Date: Thu Nov 7 16:23:22 2019 +1000 + + Update example.py + +commit 23734ffc0319804acecb41a98a2e0ea75f166c8a +Author: E-Hern Lee +Date: Thu Nov 7 15:11:34 2019 +1000 + + Delete radon.cpython-36.pyc + +commit b48aaff67d242e6a4fa4bd980b1af2b7139f8de2 +Merge: 805a0c6f e169ee6d +Author: Lynn +Date: Wed Nov 6 17:28:57 2019 +1000 + + Merge branch 's46011424_sigmoid' + +commit e169ee6df67ae14ebd48bf4fbd33247c678aea85 +Author: Lynn +Date: Wed Nov 6 17:28:35 2019 +1000 + + Add the header block of the original test file + +commit 805a0c6fce3d1f9f699d6de58276dedcb978d401 +Merge: 0f82f2b3 3c7b3f03 +Author: Lynn +Date: Wed Nov 6 17:09:40 2019 +1000 + + Merge branch 's46011424_sigmoid' + +commit 3c7b3f034aa223823fa6934158c564bbb26477ee +Author: Lynn +Date: Wed Nov 6 17:09:12 2019 +1000 + + Add the header block and some commits in code. + +commit 02480e3e3759db82764d25193d5d5cc3a5dfb0cd +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Wed Nov 6 13:05:52 2019 +1000 + + Recover readme under image directory. + +commit b8fbd73a4508ff69ca8c6765e88a43f3573ba05d +Author: Qijiang Yao +Date: Wed Nov 6 13:02:33 2019 +1000 + + Move other files to the algorithm folder. + +commit 263610c28df552d5724f259244732d537bc4e6cf +Author: Qijiang Yao +Date: Wed Nov 6 13:01:03 2019 +1000 + + Rename the algotithm folder and move it to repo root directory. + +commit 737e06400cea7d97e3f8ae3b98f5a80e579d0a7b +Author: satrfall6 +Date: Wed Nov 6 12:53:09 2019 +1000 + + Remove: removed DS_store again + +commit 9d368ff86639423a2268b38f5547cdefa646c179 +Author: satrfall6 +Date: Wed Nov 6 12:52:00 2019 +1000 + + Updated: re-organise the directory + +commit 8dbe9a0236b38bef40f6b40ca7e867580811d5ff +Author: satrfall6 +Date: Wed Nov 6 12:43:38 2019 +1000 + + Removed and Updated: + + removed all .pyc and add description to driver and main function + +commit eef2827170d65b72876e0b0b749af763a42f898f +Author: satrfall6 +Date: Wed Nov 6 12:39:25 2019 +1000 + + Removed: remove DS_store + +commit 03589170d7507da8f9110c30140dae7dd5f8f0b2 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Nov 6 11:49:04 2019 +1000 + + Update algorithm42370057.py + + intext comments + +commit 2486d950fa563bfaa6dbea8cbbba679af9d500cc +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Nov 6 11:47:22 2019 +1000 + + Update driver42370057.py + + update header and inline comment + +commit 6b6f4425b9f672cbe1987be76d3b059e22f951a2 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Nov 6 11:46:04 2019 +1000 + + Update algorithm42370057.py + + updated header + +commit bd3349d4799e3df37d350747a1d1d374e1c94c51 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Nov 6 11:38:03 2019 +1000 + + Rename image/driver42370057.py to image/42370057/driver42370057.py + + Moved directory + +commit f1511c94015b4cbc5e3ab22e9c6cd03e8b37f716 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Nov 6 11:37:36 2019 +1000 + + Rename image/algorithm42370057.py to image/42370057/algorithm42370057.py + + Moved directory + +commit d5f60409c31f3188fb99df782476210a50112a55 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Nov 6 11:36:33 2019 +1000 + + Update and rename image/42370057_README.md to image/42370057/42370057_README.md + + Moved directory, added dependency of Tensorflow 2.0 + +commit e3a05d7f9a67a2516c39e4799575ce95e6a5d477 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Nov 6 11:28:24 2019 +1000 + + Delete algorithm42370057.cpython-37.pyc + + Removed pyc file + +commit d0544ad5ca5022434713baae0579fab8492b6bbd +Author: Junjie Ye +Date: Tue Nov 5 22:30:25 2019 +1000 + + Successfully moved the folder to the main directory. + +commit b1c1180d1a886d3f484467b678c91db0c5bc0c79 +Author: Junjie Ye +Date: Tue Nov 5 22:29:22 2019 +1000 + + Move the algorithm folder to the main directory instead of under image folder. + +commit 3b74e054a1c0f7c33ef0094ab2bc3f64a51d6ffb +Author: Junjie Ye +Date: Tue Nov 5 22:27:11 2019 +1000 + + 3 files are successfully moved to the new algorithm folder + +commit adfbd7c58ea2d191f087f457000c1526c47d5cb5 +Author: Junjie Ye +Date: Tue Nov 5 22:25:09 2019 +1000 + + Move function file to algorithm folder. + +commit 8ccd311316ac7e7ad4bb6f06439c1404b8f376be +Author: Junjie Ye +Date: Tue Nov 5 22:24:19 2019 +1000 + + Move histogram plot to algorithm folder. + +commit a060bd6212033ca592a3f396aeba6d3c5c069285 +Author: Junjie Ye +Date: Tue Nov 5 22:23:28 2019 +1000 + + Move camera picture to algorithm folder. + +commit 2e9f743ba539d6899fa13b76bfbf190786c6e9c3 +Author: LeoYez <31028391+LeoYez@users.noreply.github.com> +Date: Tue Nov 5 22:10:37 2019 +1000 + + Rename image/histogram/README.md to image/histogram_45230095/README.md + +commit bb99e1902da0627a67a41ad65896c5159f803d56 +Author: LeoYez <31028391+LeoYez@users.noreply.github.com> +Date: Tue Nov 5 22:09:48 2019 +1000 + + Rename the algotithm folder name + + Move the main.py to that folder + +commit 5191bcecb3a9cd04c80244d02d3a559ed696e8f9 +Author: LeoYez <31028391+LeoYez@users.noreply.github.com> +Date: Tue Nov 5 22:07:05 2019 +1000 + + Recover the readme file + +commit c036ac6d32aa465dac7e9d6a14425142e1cd8cc5 +Author: rnvikram +Date: Tue Nov 5 20:44:31 2019 +1000 + + Updates to inline commets + + Updated the code with inline comments + +commit 0148e981f2a6cb30dbeeca0d7e6b20dcea55640a +Author: rnvikram +Date: Tue Nov 5 20:28:10 2019 +1000 + + Updated inline comments + +commit a8f8fc405e18ab8ffc4d05cbc82bbd02624aa655 +Author: rnvikram +Date: Tue Nov 5 20:23:11 2019 +1000 + + Updated inline comments + +commit 0c34cc596838206add037c69cc286b0648c29a9f +Author: rnvikram +Date: Tue Nov 5 19:50:01 2019 +1000 + + Adding inline comments + +commit fff4062e74029e3a9fa96e7dfd5b1cd3eaaa5630 +Author: rnvikram +Date: Tue Nov 5 19:40:07 2019 +1000 + + Added header information to driver script + +commit 5d47637e38a399336d3de2e76c574653c4c962cd +Author: rnvikram +Date: Tue Nov 5 19:30:02 2019 +1000 + + Update driver.py + +commit d2fbdd131aaa9b9107ed7e7eac6df6c1a7744267 +Author: rnvikram +Date: Tue Nov 5 19:12:19 2019 +1000 + + Update driver.py + + Removed directory path used for tests + +commit 8998088107e2866dc399c98568c6753766acd929 +Merge: 310d0c72 2e5b1969 +Author: Shakes +Date: Tue Nov 5 18:24:05 2019 +1000 + + Merge pull request #69 from alexander-k-j-lim/master + + Feedback - Second pull request - Number Theory + +commit 310d0c727da92bd5391924c16e066eee21fba3c6 +Merge: d698cb3b 964f0b44 +Author: Shakes +Date: Tue Nov 5 18:15:15 2019 +1000 + + Merge pull request #66 from Emily-yan1402/topic-algorithms + + Tensorflow implementation of number theory - s4494112 + +commit ad0afe9c74b0506b3b071a78e085071817d5e6d6 +Author: LeoYez <31028391+LeoYez@users.noreply.github.com> +Date: Tue Nov 5 16:20:19 2019 +1000 + + Move the readme file to the algorithm folder + +commit 964f0b44c2234d2c078ae0f6329b49c069c4239a +Author: emily1402 <53990216+Emily-yan1402@users.noreply.github.com> +Date: Tue Nov 5 14:32:19 2019 +1000 + + remove unnecessary file + + remove .DS_Store in PatternFlow folder + +commit 2d8f1ef726da487896dc4c6742cbad2b631ab01c +Author: emily1402 <53990216+Emily-yan1402@users.noreply.github.com> +Date: Tue Nov 5 14:30:16 2019 +1000 + + remove unnecessary file + + remove .DS_Store in number_theory folder + +commit d698cb3bf9f06c2f4c83c0114bbfdc57a4c8ec05 +Merge: b3b8e4d9 a5385682 +Author: Shakes +Date: Mon Nov 4 11:41:50 2019 +1000 + + Merge pull request #65 from xiaoxuansaliha/topic-algorithms + + Radon Transform by Xiaoxuan Wang + +commit b3b8e4d9377b927808cb257573ec8c095f49162f +Merge: 3a160f06 7807d6bd +Author: Shakes +Date: Mon Nov 4 11:06:22 2019 +1000 + + Merge pull request #56 from rushilsaxena/topic-algorithms + + exposure module of Scikit-Image - Histogram Rushil Saxena + +commit 3a160f0619007a5373b5d530095ccd608144e50d +Merge: e4c0aa80 8243fb3c +Author: Shakes +Date: Mon Nov 4 08:15:34 2019 +1000 + + Merge pull request #68 from jaboldinov/topic-algorithms + + Topic algorithms - rank order + +commit e4c0aa803f081ae31bc3c956199e248dc93e4a6b +Merge: fe94a909 9511c597 +Author: Shakes +Date: Sun Nov 3 23:33:29 2019 +1000 + + Merge pull request #55 from naziah28/topic-algorithms + + Adding L0smoothing to topic-algorithms + +commit fe94a90943ded3f0b5632757271f5eb213f20836 +Merge: fb7d461d 4e5c5b91 +Author: Shakes +Date: Sun Nov 3 23:28:06 2019 +1000 + + Merge pull request #54 from stryt2/topic-algorithms + + Adding radon transformation to Topic algorithms branch 43718692 + +commit fb7d461dfbd4b32d66cc7c4e96c6ff9f209c4453 +Merge: e93f6591 238e1286 +Author: Shakes +Date: Sun Nov 3 23:24:16 2019 +1000 + + Merge pull request #52 from 1tanwang/topic-algorithms + + Topic algorithms - total-variation denoising with split-Bregman by 45473623 + +commit e93f6591475d942acabf9482194dd6593f1fa5b8 +Merge: 9b1e74a3 cfa767f2 +Author: Shakes +Date: Sun Nov 3 22:46:07 2019 +1000 + + Merge pull request #35 from lewisjb/lewisjb/exposure-histogram + + [Feature] Add exposure.histogram + +commit cfa767f26a1e68e5245ccb571ebe8fcf6528c34e +Author: Lewis B +Date: Sun Nov 3 21:23:32 2019 +1000 + + Feedback + + - Rename folder + - Block comment in impl + +commit 9b1e74a381bc42f73a081a9a5b557b636558a339 +Merge: 50225678 89d36011 +Author: Shakes +Date: Sun Nov 3 16:53:29 2019 +1000 + + Merge pull request #45 from FaydSpeare/topic-algorithms + + Adjust Sigmoid s4479962 + +commit 502256781316a258d065bc84c3292f5b90f12f72 +Merge: 67f8750a 12dbc1f5 +Author: Shakes +Date: Sun Nov 3 16:46:35 2019 +1000 + + Merge pull request #13 from drussell13/histogram-equalisation + + Histogram equalisation + +commit 67f8750a59616fc6e03e9f1fcd169cb04f10da7b +Merge: e877be18 90aa7776 +Author: Shakes +Date: Sun Nov 3 16:42:06 2019 +1000 + + Merge pull request #44 from The-Hest/topic-algorithms + + Number Theory - s4596429 + +commit e877be1883bad817fa0b77cbf33d2be893c0deb0 +Merge: 0be25de1 c17d0fd9 +Author: Shakes +Date: Sun Nov 3 16:37:06 2019 +1000 + + Merge pull request #43 from Lyndon-Huang/topic-algorithms + + Topic algorithms - Number Theory + +commit 12dbc1f5afd9de8623963a259f7e08cdcd9b451f +Author: Darcy Russell +Date: Sun Nov 3 16:08:38 2019 +1000 + + Removed .idea + +commit d28070b89814efcc7bc622c3a6b31017b3e81350 +Author: Darcy Russell +Date: Sun Nov 3 16:06:48 2019 +1000 + + Removed .gitignore file + +commit 0be25de18a1e57550a942750489c8fc3ac5371b7 +Merge: 7ab66a5e 7bc2a747 +Author: Shakes +Date: Sun Nov 3 16:02:19 2019 +1000 + + Merge pull request #26 from Tristansss/topic-algorithms + + Topic algorithms-Match_histograms function --s4516210--Tianjie.Shi + +commit 7bc2a74794384726a4749d3d3a34792021ce3a53 +Merge: c4b8d099 08020145 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sun Nov 3 15:48:49 2019 +1000 + + Merge pull request #2 from Tristansss/topic-algorthms + + update :“remove all ds_store files” + +commit 08020145a43f2d37edf241c58bbce0d1f0e6ce57 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sun Nov 3 15:17:48 2019 +1000 + + update :remove all ds files + +commit c4b8d09964887bdda078eb7ca06ebb6908f3450c +Merge: 55509c4a 11625173 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sun Nov 3 13:58:18 2019 +1000 + + Merge pull request #1 from Tristansss/topic + + update: remove DS_Store and __pycache__ + +commit 11625173be334e3fda9e1ac5281be022d261ad6a +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sun Nov 3 13:46:30 2019 +1000 + + update: remove DS_Store and __pycache__ + +commit 7ab66a5e33a3eb3a2fa344fcb866a85089ceff3a +Merge: b94b477a 3635add9 +Author: Shakes +Date: Sun Nov 3 09:58:11 2019 +1000 + + Merge pull request #39 from antoinedelplace/topic-algorithms + + Add Pixel-Based Visual Information Fidelity measure + +commit b94b477a5901c0fd3581ab78a368b99c96d4fbe0 +Merge: bceb985e addd308f +Author: Shakes +Date: Sun Nov 3 09:54:25 2019 +1000 + + Merge pull request #37 from qg007110/topic-algorithms + + S4467912_Adjust_log_Guan_Qin + +commit bceb985eeccd69a1ff48ee2f4962122a3dcf5830 +Merge: 152fcd8d 8e6de72e +Author: Shakes +Date: Sun Nov 3 09:50:44 2019 +1000 + + Merge pull request #67 from shakes76/revert-27-master + + Revert "44679129_Guan Qin" + +commit 8e6de72ee5245b3f01de9607770f1f8905887e90 +Author: Shakes +Date: Sun Nov 3 09:50:08 2019 +1000 + + Revert "44679129_Guan Qin" + +commit 152fcd8d34c01990e2c6038a1431927957d1a8d3 +Merge: c64a38c7 e766e121 +Author: Shakes +Date: Sun Nov 3 09:46:32 2019 +1000 + + Merge pull request #36 from vaibhavi5/topic-algorithms + + Topic algorithms - Sobel + +commit c64a38c711228838fd2ca3c947c4aa7a76b69733 +Merge: b79bc5ba 7cd506d3 +Author: Shakes +Date: Sun Nov 3 09:31:03 2019 +1000 + + Merge pull request #34 from dsuncn/topic-algorithms + + downscale_local_mean(transform module) DiSUN_s4526527 + +commit b79bc5ba1461e9f81d7cf339b81cc5b407fe8355 +Merge: 22d6b505 4abe1f5a +Author: Shakes +Date: Sun Nov 3 09:22:54 2019 +1000 + + Merge pull request #33 from mubiquity/topic-algorithms + + Implement L0 norm smoothing + +commit 22d6b5059f0e595b6feeea66fd0fd2f13c43b1c0 +Merge: 016188e8 e30e6c16 +Author: Shakes +Date: Sun Nov 3 09:04:28 2019 +1000 + + Merge pull request #31 from JNRuan/topic-algorithms + + L0 Norm Smoothing - 44276498 + +commit 016188e8f2729117bd2a15eddea4cd6edc32efca +Merge: 400cb8a7 3f844f02 +Author: Shakes +Date: Sun Nov 3 00:01:41 2019 +1000 + + Merge pull request #27 from qg007110/master + + 44679129_Guan Qin Adjust log + +commit 400cb8a76153314fad70a7ff954fa7dd9e47de50 +Merge: 057afcc7 4e4e361d +Author: Shakes +Date: Sat Nov 2 23:48:58 2019 +1000 + + Merge pull request #25 from RoyUQ/topic-algorithms + + Adjust_sigmoid algorithm - s4473202 + +commit 057afcc73661fe234687a18ca063f854e34affa0 +Merge: 78b6f947 e45d1933 +Author: Shakes +Date: Sat Nov 2 23:43:43 2019 +1000 + + Merge pull request #24 from lorisrossi/topic-algorithms + + Topic algorithms Adjust Gamma + +commit 78b6f947dc19b48bd152aea4515813d52909c14c +Merge: 9097345a 58ee9a9b +Author: Shakes +Date: Sat Nov 2 23:32:30 2019 +1000 + + Merge pull request #20 from yufeng97/topic-algorithms + + Logarithmic Correction algorithm from scikit-image exposure module + +commit 9097345a5c92c0bf2ff686c8dd68dd762b5265ee +Merge: 49383eea 8035938b +Author: Shakes +Date: Sat Nov 2 23:20:02 2019 +1000 + + Merge pull request #19 from rexsw/topic-algorithms + + pull request sk.exposure histogram equalization + +commit 49383eea273ef80960cbf3a58a39f651ffe4054b +Merge: b57eb07f bb8f5c38 +Author: Shakes +Date: Sat Nov 2 16:12:08 2019 +1000 + + Merge pull request #16 from PeterBaldry/topic-algorithms + + Image Histogram (Exposure Module) - Peter Baldry + +commit bb8f5c381ba40e22b879598ab198fc0506a1f28a +Author: Peter Baldry +Date: Sat Nov 2 13:58:55 2019 +1000 + + removed .gitignore and unnecessary binary files as required + +commit b57eb07f703053bafaf4d4b3bf41b9c31841e68b +Merge: 7c9f135f 8a92d407 +Author: Shakes +Date: Sat Nov 2 13:54:45 2019 +1000 + + Merge pull request #17 from chrisbin07/topic-algorithms + + Scikit Image Exposure - Histogram Chrisbin James + +commit 7c9f135fe1e55e6da2ce2a9032fe2b1f4b698f28 +Merge: 80c52f57 8c00e1c4 +Author: Shakes +Date: Sat Nov 2 13:18:02 2019 +1000 + + Merge pull request #11 from umbertopietroni/topic-algorithms + + Skimage Exposure Histogram - Umberto Pietroni + +commit 80c52f57cd7765d68e149cc4d944daaec3b7aae8 +Merge: cbb6251d 94081dfd +Author: Shakes +Date: Sat Nov 2 13:10:20 2019 +1000 + + Merge pull request #10 from shuishoudage/master + + First version of exposure module implementation in pytorch - s4500482 + +commit cbb6251daebc94b1da3cb59264cd28a906acb904 +Merge: d716e4f6 8a05fa7c +Author: Shakes +Date: Sat Nov 2 12:50:43 2019 +1000 + + Merge pull request #9 from SoloKwansy/topic-algorithms + + Gaussian integers - s4478632 + +commit d716e4f645bfacc3baaf7a1e04ca6caf5db0f999 +Merge: 32f8bfa8 0f82f2b3 +Author: Shakes +Date: Sat Nov 2 12:44:25 2019 +1000 + + Merge pull request #8 from Lynn-Dai/master + + Yitong Dai's Assignment 3 of COMP3710 + +commit 32f8bfa86ad51aeabde5af6bae17cc7234dbdff3 +Merge: 6e003d71 1fcc7c33 +Author: Shakes +Date: Sat Nov 2 12:36:13 2019 +1000 + + Merge pull request #6 from tm70/topic-algorithms + + Radon Transform + +commit 6e003d71a2de56ca47898dd4bea1d411cda6f024 +Merge: ac7ba220 2656523b +Author: Shakes +Date: Sat Nov 2 12:28:44 2019 +1000 + + Merge pull request #5 from wjw950224/topic-algorithms + + Add unsupervised-wiener to Topic algorithms + +commit ac7ba22065eb5c629c5a8bfc4c264ae36a00f014 +Merge: 75c719aa d85f8f7e +Author: Shakes +Date: Sat Nov 2 12:18:24 2019 +1000 + + Merge pull request #4 from IRINKTK/topic-algorithms + + [develop] Complete gamma correction with README.md + +commit 75c719aad8538d4af4103495602031af52df834e +Merge: 5dd102d0 5e44f326 +Author: Shakes +Date: Sat Nov 2 12:01:59 2019 +1000 + + Merge pull request #3 from microwen/topic-algorithms + + Add Wiener Deconvolution to Topic algorithms + +commit 86bc8d29644f9345e5deb0bb5a15a62b578fefc3 +Author: emily1402 <53990216+Emily-yan1402@users.noreply.github.com> +Date: Mon Oct 28 11:52:01 2019 +1000 + + update readme file with new algorighm discription + +commit d3c6e6545a841846b073bad4c398137a0fd795ab +Author: emily1402 <53990216+Emily-yan1402@users.noreply.github.com> +Date: Mon Oct 28 11:49:44 2019 +1000 + + add readme file + +commit d6d0f511d731d7583188bf179fd8d96698dc0a97 +Author: emily1402 <53990216+Emily-yan1402@users.noreply.github.com> +Date: Mon Oct 28 11:49:31 2019 +1000 + + add main function + +commit d346833e455df3c3bbf03ffdf42ce0b52b854b11 +Author: emily1402 <53990216+Emily-yan1402@users.noreply.github.com> +Date: Mon Oct 28 11:49:10 2019 +1000 + + add xgcd module + +commit 5a6296fee76f0ce5ea5ce46713436fbc6c6e8c1c +Author: emily1402 <53990216+Emily-yan1402@users.noreply.github.com> +Date: Mon Oct 28 11:48:56 2019 +1000 + + add gcd module + +commit 8f7c544995ec9c56fbed7b591da3751009815f96 +Author: emily1402 <53990216+Emily-yan1402@users.noreply.github.com> +Date: Mon Oct 28 11:48:29 2019 +1000 + + first commit + +commit a538568282ec7f4bd78d953411244e72b97a5601 +Author: xiaoxuansaliha +Date: Mon Oct 21 09:50:11 2019 +1000 + + finished everything and finalized + +commit f8faed02500d63bb4bc15df0ab22ec1ed1ba609d +Author: xiaoxuansaliha +Date: Sun Oct 20 23:13:17 2019 +1000 + + finished reconstructing the folder + +commit 85c7fd9f34d1d2a52919bd874645c87ec8e0b4eb +Author: xiaoxuansaliha +Date: Sun Oct 20 22:50:19 2019 +1000 + + completed radon transform + +commit 2a2c3bff6330c32d17676ae2b616bbf3308a15e7 +Author: E-Hern Lee +Date: Sat Oct 19 00:54:58 2019 +1000 + + fix image and README + +commit 43b4de58733aa3474cdedbf40f7fc7a854f4af0a +Author: E-Hern Lee +Date: Sat Oct 19 00:53:20 2019 +1000 + + flesh out README + +commit 2153c0710181572532dfae7ce85e74683495f8b3 +Author: E-Hern Lee +Date: Sat Oct 19 00:36:32 2019 +1000 + + fix algorithm, add example script and README + +commit 9a53c70436261539f22c6d801d18c8f7af93c58b +Author: coppers-j +Date: Sat Oct 19 00:10:48 2019 +1000 + + updated + +commit 91cbd80bbb91f667547c97ff4554b0d179a46b2a +Author: E-Hern Lee +Date: Fri Oct 18 23:56:58 2019 +1000 + + almost works + +commit a97c2dcece52e0cb682f71e18316d090ca3248bc +Author: craigdeng <53163106+craigdeng@users.noreply.github.com> +Date: Fri Oct 18 23:51:35 2019 +1000 + + Update Readme + +commit b02059e87b0848ec821a0c8c6391cc75e6002b72 +Author: coppers-j +Date: Fri Oct 18 23:47:22 2019 +1000 + + renaming + +commit ecd6c0ae54d1dca16749d3fc2fd223bfeee9473d +Author: craigdeng <53163106+craigdeng@users.noreply.github.com> +Date: Fri Oct 18 23:47:06 2019 +1000 + + Delete README.md + +commit c31732efed9ca4294c5afc92bceb9126ba01cce7 +Author: craigdeng <53163106+craigdeng@users.noreply.github.com> +Date: Fri Oct 18 23:46:05 2019 +1000 + + Rename image/histogram_s4443048_Puyang_Deng/README.md to image/histogram_s4443048/README.md + +commit 25dc7d3b20fd29db23d91a005d16228a98580429 +Author: craigdeng <53163106+craigdeng@users.noreply.github.com> +Date: Fri Oct 18 23:41:23 2019 +1000 + + Delete .DS_Store + +commit 9774b36d0d9c9edd1eb602bff530b305a6bf9d11 +Author: craigdeng <53163106+craigdeng@users.noreply.github.com> +Date: Fri Oct 18 23:41:11 2019 +1000 + + Delete .DS_Store + +commit 290dec4104a30708f7f5fa76325b5a54db98a7a9 +Author: coppers-j +Date: Fri Oct 18 23:36:56 2019 +1000 + + pivot to histogram + +commit 8f104b8fc81834e7192b13f79d9392b26a90bf18 +Merge: 9466033a 557528f9 +Author: craigdeng +Date: Fri Oct 18 23:35:23 2019 +1000 + + Merge branch 'topic-algorithms' of https://github.com/craigdeng/PatternFlow into topic-algorithms + +commit 9466033ab894d62e378440b8a7b651c671e65ef1 +Author: craigdeng +Date: Fri Oct 18 23:34:23 2019 +1000 + + Complete all changes + + Change names and file position + +commit 557528f99fee7e4e77e947a73cd6270865c6dea8 +Author: craigdeng <53163106+craigdeng@users.noreply.github.com> +Date: Fri Oct 18 23:22:57 2019 +1000 + + Update README file + + Add the output image + +commit 7667765831788940106375d16169578c0085a8cd +Merge: 756ce9b6 24c88fdf +Author: craigdeng +Date: Fri Oct 18 23:17:46 2019 +1000 + + Merge branch 'topic-algorithms' of https://github.com/craigdeng/PatternFlow into topic-algorithms + +commit 756ce9b6da04d727d7ff1638af85d66bbaa101a1 +Author: craigdeng +Date: Fri Oct 18 23:17:20 2019 +1000 + + Update image output + + Change the image in high resolution + +commit 24c88fdf85e0966abb005d687a5545b9717d0d99 +Author: craigdeng <53163106+craigdeng@users.noreply.github.com> +Date: Fri Oct 18 23:15:46 2019 +1000 + + Creat README file + +commit c8bfac14b7c06a8aa937e9865667b8b1edaae0b2 +Author: craigdeng +Date: Fri Oct 18 22:08:17 2019 +1000 + + Move files + +commit 45fe6c0898daf35b724c7427a5db79e3c86c2d81 +Author: craigdeng +Date: Fri Oct 18 22:02:32 2019 +1000 + + Complete the plot and comment + + 1. Upload the plot + 2. Put comment in the code line + +commit 0f4dc20d89ba97325fc3447e72cb5d89c2f03e8b +Author: xiaoxuansaliha +Date: Fri Oct 18 21:23:48 2019 +1000 + + added doc string + +commit 07b228416677d1bf852685f8a8f83485140bee7f +Author: E-Hern Lee +Date: Fri Oct 18 21:13:30 2019 +1000 + + fixing bugs + +commit 7807d6bd57a794b7ae6fb5840b2cb7e64205e5e7 +Author: Rushil +Date: Fri Oct 18 21:10:23 2019 +1000 + + added readme + +commit 9511c597c491bcaf9a552f60b4fbdf6ee14992ef +Author: naziah28 +Date: Fri Oct 18 21:05:46 2019 +1000 + + fixed the example usage commang + +commit b7787ee0dff7658da22b0f405a3913ed7a97d4c7 +Author: Naziah +Date: Fri Oct 18 21:00:31 2019 +1000 + + remove all other files + +commit f3d1afa2684ea5211b1597ed161c36e4b0c78110 +Author: Naziah +Date: Fri Oct 18 20:59:52 2019 +1000 + + remove tracking + +commit ce16a5ad01f9ae2e6c2b68650c3d23b3490d0a9e +Author: coppers-j +Date: Fri Oct 18 20:53:59 2019 +1000 + + initial method stubs and arg checking + +commit beaa90e71bc42f58a751714f6326268af813269e +Author: Naziah +Date: Fri Oct 18 20:52:05 2019 +1000 + + final run + +commit 078c1a763be2440d30a149f8b1e8f9edb63ab5ee +Author: E-Hern Lee +Date: Fri Oct 18 20:51:33 2019 +1000 + + fix more issues + +commit 8d8bef3f52ee84cad9f1063084c5720f1b91d25c +Author: Naziah +Date: Fri Oct 18 20:51:25 2019 +1000 + + added author to scripts + +commit 2a2791c75c23b5a013530887206443ef21107056 +Author: Naziah +Date: Fri Oct 18 20:50:55 2019 +1000 + + minor edit to refs + +commit a8fb74bcefaeaf5283519635c674b1e800866f15 +Author: Rushil +Date: Fri Oct 18 20:48:13 2019 +1000 + + Commented Code + +commit 8ab69dd16b0f0d3ead33a037122c75a25df47f3a +Author: E-Hern Lee +Date: Fri Oct 18 20:47:16 2019 +1000 + + fix more issues + +commit dde207b40a4e5ab9be5054f5a511b89d0cf45095 +Author: Rushil +Date: Fri Oct 18 20:44:15 2019 +1000 + + feed-dict + +commit 0cfe5952c771e34b15a1c16bc81464a8c21ac6b6 +Author: Naziah +Date: Fri Oct 18 20:38:20 2019 +1000 + + added version in dependencies + +commit 740385cc02e180ec76ac23d2002f959039f0c8b0 +Author: Naziah +Date: Fri Oct 18 20:34:44 2019 +1000 + + update readme to include refs and more usage info + +commit cd15cd4a97d7524f738f927650b96f589f526296 +Author: Naziah +Date: Fri Oct 18 20:19:44 2019 +1000 + + added reference to original implementation paper + +commit 2ab68a556cba6a26bec98aff8ddef57d6508f0ec +Author: coppers-j +Date: Fri Oct 18 20:11:18 2019 +1000 + + cleaned up + +commit 0bfbca294a1430ccfa39ad74c54a1c11ecda239d +Author: Naziah +Date: Fri Oct 18 20:11:02 2019 +1000 + + segmented into driver main function and l0 script, removed np imports from l0script and cleaned up code + +commit 8f110eb81556a8fdc5bf2ea542e58aa7d4b84687 +Author: coppers-j +Date: Fri Oct 18 19:55:00 2019 +1000 + + working test script for skimage algo + +commit d7a828ec19fe733e1623333f7f215a7282a9a63d +Author: craigdeng +Date: Fri Oct 18 19:53:50 2019 +1000 + + Add document and fixs + + Add and complete the document and finalize some fix changes + +commit 4e5c5b91f009f00ddeb4e0092a9816c2ab19b482 +Author: tshang +Date: Fri Oct 18 19:36:37 2019 +1000 + + Cleaned up and added references. + +commit 2aa23dd1c0cfa269130ec657df168fc062b59e76 +Author: craigdeng +Date: Fri Oct 18 19:27:15 2019 +1000 + + Add test run file + + add test.py file and sucessfully output image histogram + +commit 03de65fa27e691c17e23a695e055255009503d8e +Author: craigdeng +Date: Fri Oct 18 19:20:50 2019 +1000 + + Rewrite the normalization + + rewrite the normalization in tensorflw with tf.reduce_sum() + +commit 9daa848800676ea5ffe467cdf8c1d7c9ad7f62d0 +Author: tshang +Date: Fri Oct 18 19:08:13 2019 +1000 + + Added more explanations etc. + +commit 746f25144416de93bc2b1dba5b04a223cd269ec6 +Author: craigdeng +Date: Fri Oct 18 19:17:54 2019 +1000 + + Rewrite histogram using tensorflow + + 1. Convert the image into tensor with data type tf.float32 + + 2. Change the numpy function histogram into tensorflow function histogram + +commit 0f475ffb223d98d9bef772cecb890534c40722c0 +Author: tshang +Date: Fri Oct 18 18:59:18 2019 +1000 + + Added time unit to the description. + +commit 58d75bab93af453a77f3c83bb1c9e14b19304400 +Author: tshang +Date: Fri Oct 18 18:57:42 2019 +1000 + + Added iradon to validate the implementation. + +commit 049cef5fb76243213aa49819493a7fc94c2fe94a +Author: tshang +Date: Fri Oct 18 18:56:45 2019 +1000 + + Cut down requirements.txt. + +commit 7dad79f2b883aa0e10aca842bbc12289c5f1a151 +Author: tshang +Date: Fri Oct 18 18:56:21 2019 +1000 + + Updated README.md. + +commit b4519c3527515364d12d1078ecef53ba6d071014 +Author: craigdeng +Date: Fri Oct 18 18:15:16 2019 +1000 + + Add and rewrite dtype_limit & define dtype_range + + 1. Update the dtype_limts from sipy library in tnesor flow, delete some unused statement + 3. define the data range for dtype_range + +commit 78316769cbbd322337954a4b3b31ce9fcbdb6a1a +Author: craigdeng +Date: Fri Oct 18 18:10:49 2019 +1000 + + Rewrite the situation when data type is not integer + + 1. Rewrite the statement when data type is not integer + + 2. Source is image; source is dtype + + 3. Rewrite the hist_range to [0,256] when source is image, since the picture is normally define as 256 rgb + + 4. Source range should be image or dtype otherwise raise error + + 5. Using dtype_limit as function (will write in next commit) + +commit 5c7f2af248d5479b81cff1f797a941b31387c3ec +Author: tshang +Date: Fri Oct 18 18:06:29 2019 +1000 + + Added result images. + +commit cd47380c6367504ace52bbf11265d81ef0f8ccc4 +Author: craigdeng +Date: Fri Oct 18 17:20:34 2019 +1000 + + Add and rewrite function: _offset_array + + Rewrtite function _offset_array() + igonore the checking statement using + numpy prmote_type since we do not using numpy data type + +commit 238e1286e4f69d096e2d148edcdef504e20fd985 +Author: 1tanwang +Date: Fri Oct 18 17:19:45 2019 +1000 + + fix latex problem in README.md + +commit 46394ef2630867b9ce52e8a711ece0b76b4b9e3c +Author: 1tanwang +Date: Fri Oct 18 17:18:46 2019 +1000 + + fix README.md latex equation with image again + +commit 16817ca15f087834cb49ca72b48b022e16b11795 +Author: 1tanwang +Date: Fri Oct 18 17:17:58 2019 +1000 + + fix README.md latex equation with image + +commit 3326ca896f081b802d5c64214f102e535c9ad1d4 +Merge: 3bde8b54 a959e6a6 +Author: 1tanwang +Date: Fri Oct 18 17:16:43 2019 +1000 + + Merge branch 'topic-algorithms' of https://github.com/1tanwang/PatternFlow into topic-algorithms + +commit 3bde8b54d21faa749840e0e986f53293d429857f +Author: 1tanwang +Date: Fri Oct 18 17:16:40 2019 +1000 + + fix README.md with latex method + +commit a959e6a673d5889c76f13d810cf7b5a1acd451f9 +Author: 1tanwang <51037724+1tanwang@users.noreply.github.com> +Date: Fri Oct 18 17:08:15 2019 +1000 + + fix README.md with latex method + +commit 8d20910ea174100225f1388b1a8df432297a093a +Author: tshang +Date: Fri Oct 18 17:08:04 2019 +1000 + + Optimised to the best as far as the assignment's concern. WIP - Clean up required. + +commit 504a67fdeb91f7e9167dda5f62b6f85c86c93ce4 +Author: 1tanwang +Date: Fri Oct 18 17:05:07 2019 +1000 + + add comments + +commit 1d44c50b41509c5893fe7d3fe07f40c32e3cc38e +Author: 1tanwang +Date: Fri Oct 18 17:03:08 2019 +1000 + + add content in README.md + +commit be855c59d06b6dd671abe56f4ac0b9c6f8ffd4d8 +Author: rnvikram +Date: Fri Oct 18 16:49:49 2019 +1000 + + Final push + +commit 8f96b5e4c7985ee6134594d34ce5c632dbf41fec +Author: rnvikram +Date: Fri Oct 18 16:47:15 2019 +1000 + + Final push + +commit 766c991cb84a2c710ea7189d74032096423ca71b +Author: Vikram Niranjen +Date: Fri Oct 18 16:33:55 2019 +1000 + + fixed errors in driver file + +commit a935a491f1b070d9830cd3d9a4347c1b43705e86 +Author: Vikram Niranjen +Date: Fri Oct 18 16:28:50 2019 +1000 + + removed one numpy usage + +commit 2e5b19690d8a6455a8e6022216bad867fc3a9571 +Author: Alexander Emmanuel K.J Lim +Date: Fri Oct 18 16:23:55 2019 +1000 + + finalised 2 + +commit 387ecf5df5e482d029603022d5912f613323994a +Author: Alexander Emmanuel K.J Lim +Date: Fri Oct 18 16:21:45 2019 +1000 + + finalised + +commit 5355f59a926f1c42d78e6c7b094fd919c629c22b +Author: Vikram Niranjen +Date: Fri Oct 18 16:06:09 2019 +1000 + + readding as new files since the files were implemented in the master branch initialy + +commit 9c95154240ccd0c9e1199bbf06ac85f5bf1664be +Author: craigdeng +Date: Fri Oct 18 16:02:20 2019 +1000 + + Rewrite function bitcount + + 1. rewrite the if statement checking the datatype of image + 2. rewrite the bitfunction with tensorflow + + major changes: + 1. datatype change to tensorflow + 2. changing the numpy fucntion: arange bincount to tensorflow function: range , math.bincount + +commit 834df17d2e18c7663375177296fce2620e21d85b +Author: craigdeng +Date: Fri Oct 18 15:40:18 2019 +1000 + + import tensorflow, change shape function + + Import the tensorflow as tf + +commit 031ef3b7b9876f9c1b322a745f95147d45989366 +Author: Alexander Emmanuel K.J Lim +Date: Fri Oct 18 15:35:24 2019 +1000 + + added test_drive + +commit e5fe746c6b1be72fcb46a7a944cc4639b4923d0a +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Fri Oct 18 14:20:08 2019 +1000 + + Update README.md + +commit 0929cadc21928275971fedd3f8996b24b00c31cb +Author: satrfall6 +Date: Fri Oct 18 13:41:28 2019 +1000 + + Removed: remove duplicated folder + +commit e5708d6c9b380940cfab16af5090de8147ea9889 +Author: Alexander Emmanuel K.J Lim +Date: Fri Oct 18 13:24:52 2019 +1000 + + I changed the isprimeF functions from using tf.pow to tfpower_mod as Shakes suggested + +commit 13c741398f6c2d2a439d61d892fbc08078f66750 +Author: E-Hern Lee +Date: Fri Oct 18 12:52:47 2019 +1000 + + fixing bugs + +commit e8eb09feee1d0b7c87ffb1ab54af17ba78a290a6 +Author: E-Hern Lee +Date: Fri Oct 18 11:22:18 2019 +1000 + + add test data + +commit 90aa77764203a8a949fc505fee09da939e402ec8 +Author: The-Hest <32456416+The-Hest@users.noreply.github.com> +Date: Fri Oct 18 02:50:13 2019 +0200 + + Update README.md + +commit e8dc01b1490ff8e18f20013a45cc8103da910203 +Author: The-Hest <32456416+The-Hest@users.noreply.github.com> +Date: Fri Oct 18 02:35:40 2019 +0200 + + Create README.md + +commit 3e4ffc2e2962bb63e5c28acddfab528119f70a37 +Author: E-Hern Lee +Date: Fri Oct 18 10:30:09 2019 +1000 + + actually finish changing numpy to tensorflow + +commit ac1c4d4b360ca73e2ed203c115057d8e3ae473eb +Author: E-Hern Lee +Date: Fri Oct 18 10:28:05 2019 +1000 + + start work... i guess + +commit b18fd78dd72e6336b4c772fdfff68096fd6060f2 +Author: Unknown +Date: Fri Oct 18 02:24:03 2019 +0200 + + Minor comments changes + +commit a10ef563a695d290b901e5e98ea11e1fae64f3dd +Author: Unknown +Date: Fri Oct 18 02:11:36 2019 +0200 + + Implemented driver script w/ comments + +commit 08d71ba5864e08418a78fb04844f00dd5fa8c444 +Author: Unknown +Date: Fri Oct 18 02:09:58 2019 +0200 + + - Print removed + +commit c17d0fd975e961812232fb06273a1f439386e337 +Merge: bdc91da8 b09f41fd +Author: “xuannan +Date: Fri Oct 18 09:29:24 2019 +1000 + + Merge branch 'topic-algorithms' of github.com:Lyndon-Huang/PatternFlow into topic-algorithms + +commit bdc91da84db0f285c131a493fd385104ef722c9f +Author: “xuannan +Date: Fri Oct 18 09:29:04 2019 +1000 + + latest version + +commit a32c0e09f8c52f6009ec790da0e40ac77690101e +Author: “xuannan +Date: Fri Oct 18 09:28:34 2019 +1000 + + latest version + +commit b09f41fd8af579559d3bd980618c3e2ce2a7af86 +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Fri Oct 18 09:13:16 2019 +1000 + + Added description + +commit 89d36011f0c9fd8eba70099bcbb826ae241c648e +Author: FaydSpeare +Date: Fri Oct 18 03:29:27 2019 +1000 + + finalized comments + +commit 57bb1870e42f38db78cd5fc5b831ab6c7a8aa2b5 +Merge: 5ab3bf87 61350e61 +Author: FaydSpeare +Date: Fri Oct 18 03:28:57 2019 +1000 + + Merge branch 'topic-algorithms' of https://github.com/FaydSpeare/PatternFlow into topic-algorithms + +commit 61350e614a879611e8192538ac2467bdaff7114a +Author: Fayd Speare +Date: Fri Oct 18 13:09:34 2019 +1000 + + Update README.md + +commit 401f4a415364576362f8efc875b1fb16f92a65e2 +Author: Fayd Speare +Date: Fri Oct 18 12:54:17 2019 +1000 + + Update README.md + +commit 3019cab07dfddb9f6466a086ef01fbe3bf17709c +Author: Fayd Speare +Date: Fri Oct 18 12:53:14 2019 +1000 + + Update README.md + +commit eb6aca30988dd20158cbfad925199beeb683de16 +Author: Fayd Speare +Date: Fri Oct 18 12:51:43 2019 +1000 + + Update README.md + +commit 69d58b142a07797302800e5293dcac28eca4ce5f +Author: Fayd Speare +Date: Fri Oct 18 12:50:04 2019 +1000 + + Update README.md + +commit c53e8ecd7d5af9307201b98ca3f95d377f0cd835 +Author: Fayd Speare +Date: Fri Oct 18 12:49:40 2019 +1000 + + Update README.md + +commit 471f3a698b86433ee39bd38c02619084612537a8 +Author: Fayd Speare +Date: Fri Oct 18 12:49:14 2019 +1000 + + Update README.md + +commit 63b67ba0b29f577572a4304cca1bcf147831e1e9 +Author: Fayd Speare +Date: Fri Oct 18 12:47:10 2019 +1000 + + Update + +commit 5ab3bf8708083eacb93ef7b62922cc660a0f8f84 +Author: FaydSpeare +Date: Fri Oct 18 03:27:23 2019 +1000 + + finalized comments + +commit bec5b787e5ec90eac508053ce040bb17fb4685a1 +Author: FaydSpeare +Date: Fri Oct 18 02:44:16 2019 +1000 + + change to jpg + +commit 45bbfb7c3c15178e245a2564ec695cc20b94e2e8 +Author: FaydSpeare +Date: Fri Oct 18 02:38:25 2019 +1000 + + updated readme + +commit baf57289451664565dd5fd2c0d86696472a0ed9d +Author: tshang +Date: Fri Oct 18 02:37:17 2019 +1000 + + WIP - Import should be finished, but still debugging. + +commit 91a982b316a8edc411df49f8c60370fda0978f9f +Author: FaydSpeare +Date: Fri Oct 18 02:34:51 2019 +1000 + + updated readme + +commit 659dcb5b9cbbce4f25d2f0b7af3579af27932504 +Author: FaydSpeare +Date: Fri Oct 18 02:32:53 2019 +1000 + + updated readme + +commit c905f44a0b58565dbe031f42da4dd762525d1ac1 +Author: FaydSpeare +Date: Fri Oct 18 02:20:39 2019 +1000 + + added example output image + +commit 7c8c9efa0b0cbed30f0d1beff0564683cdc83b91 +Author: FaydSpeare +Date: Fri Oct 18 02:09:15 2019 +1000 + + added readme + +commit dc537d87dc2f2c0845c4398e652e0036838c09c2 +Author: FaydSpeare +Date: Fri Oct 18 02:07:45 2019 +1000 + + added readme + +commit f6e25daa6fed200e70be91dfaca4590290c63199 +Author: FaydSpeare +Date: Fri Oct 18 01:59:41 2019 +1000 + + added driver script + +commit a6af12dbde6dead4d929180972ff34c7905758b0 +Author: FaydSpeare +Date: Fri Oct 18 01:52:57 2019 +1000 + + added limits + +commit 501d48426877f3cb66900bb5fc7209f5109dfcd8 +Author: FaydSpeare +Date: Fri Oct 18 01:42:48 2019 +1000 + + added code for actual function + +commit b74769a51064104a1bc3c281ff4fffa85c3706ba +Author: Naziah +Date: Fri Oct 18 01:40:03 2019 +1000 + + more info to radme + +commit fa768f8ef10c143ab7063d024ed648627b1cce79 +Author: FaydSpeare +Date: Fri Oct 18 01:38:42 2019 +1000 + + initial + +commit 012364bdabf3d594b05daa55ac82192b309454a1 +Author: Naziah +Date: Fri Oct 18 01:36:57 2019 +1000 + + more info to radme + +commit 106720052447fa18c6756b051c00020a0ca102e2 +Author: Alexander Emmanuel K.J Lim +Date: Fri Oct 18 01:17:33 2019 +1000 + + added detail README.md and change some numbthy_tf.py + +commit 45fc29d39f9f94cd98fe9270298906381612be23 +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Fri Oct 18 00:42:15 2019 +1000 + + update Acknowledgment + +commit 6ee53f642bc04f50367966bea8c2d9b727e5fd68 +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Fri Oct 18 00:41:01 2019 +1000 + + update image + +commit ac2538cf55cac114aaab380cb7debe88deb5bfcf +Author: “xuannan +Date: Fri Oct 18 00:39:49 2019 +1000 + + update image + +commit 050f8f60a5335dfc1a656f4d17800e801d2ea857 +Merge: 52882934 ae400220 +Author: “xuannan +Date: Fri Oct 18 00:33:35 2019 +1000 + + add correct image. Merge branch 'topic-algorithms' of github.com:Lyndon-Huang/PatternFlow into topic-algorithms + +commit 528829342e086f3282a48fd6fa85fdfefc539ecc +Author: “xuannan +Date: Fri Oct 18 00:33:02 2019 +1000 + + added correct Image + +commit ae400220b8455ea48148921c51d77e16506e7ba2 +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Fri Oct 18 00:25:32 2019 +1000 + + change the order of images + +commit d1f6755bdc5c77acc6869c4c6ef928608c0b3a53 +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Fri Oct 18 00:24:20 2019 +1000 + + modified the images path + +commit 37609110b33184e51c68d857b519ccfaf5506ca8 +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Fri Oct 18 00:14:14 2019 +1000 + + modified the path of image + + wrong path of image, modified the path + +commit b8c8adf1da59c827562abf15da8dd18b7f163b15 +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Fri Oct 18 00:12:25 2019 +1000 + + added result image + + added result image of the Tendorflow code and source code + +commit a84b810906d8576930935d9ba584723551569d15 +Author: “xuannan +Date: Fri Oct 18 00:06:00 2019 +1000 + + result image of driver_script and SC_sample_test + +commit bed31f8c7a165529376de84b28c861b6bd7235df +Merge: c2b9f2c0 72008916 +Author: “xuannan +Date: Thu Oct 17 23:54:20 2019 +1000 + + I added the Readme.md file in github, so I need to merge branch 'topic-algorithms' of github.com:Lyndon-Huang/PatternFlow into topic-algorithms + +commit 7e80f2047ac204fc41821bc04eedde4598dfd5a3 +Author: Naziah +Date: Thu Oct 17 23:49:50 2019 +1000 + + move algo to respective folder + +commit 898b9974133499e2f6e955cccf55a6cc84bf07b0 +Author: Naziah +Date: Thu Oct 17 23:47:41 2019 +1000 + + untrack files + +commit 21e5253818b50bbab0e8a01269f6d39226cf51ff +Author: Naziah +Date: Thu Oct 17 23:45:10 2019 +1000 + + cleaned up directory and example folder + +commit c2b9f2c017989a523a65f7ed76c11cbc24b1ebdc +Author: “xuannan +Date: Thu Oct 17 23:43:40 2019 +1000 + + Some sample tests for the source code, which have the same result with the numbthy_driver_script.py + +commit 199df6c9d250a76556b6089fde62dbba8eb89401 +Author: Naziah +Date: Thu Oct 17 23:42:23 2019 +1000 + + if wanted multirun + +commit 270d247a3e7187f628cbf4ee540a29c452c76beb +Author: “xuannan +Date: Thu Oct 17 23:41:56 2019 +1000 + + The driver_script of numbthy.py + +commit 83d53eb81ef42ddc4be8b9d722d0f1c033205b1b +Author: “xuannan +Date: Thu Oct 17 23:40:14 2019 +1000 + + latest version, clear testing code, added comment, modified function sqrtmod + +commit 7fcfc0fd899f8e7f6b1462058fb3b3e9d7032083 +Author: Naziah +Date: Thu Oct 17 23:37:09 2019 +1000 + + rewire img refs + +commit e16e042ebec0ce906da867993f2f6614f883b716 +Author: Naziah +Date: Thu Oct 17 23:36:39 2019 +1000 + + scaled images for the lambda vals + +commit d21802c91e52fc031c40410893cddf1b3a2a4674 +Author: Naziah +Date: Thu Oct 17 23:27:43 2019 +1000 + + slight bigger photos + +commit d61d56285908f31f8070fc25b9f88e0539b88462 +Author: Naziah +Date: Thu Oct 17 23:26:58 2019 +1000 + + slight bigger photos + +commit ca63ca51d670016ec11ecc78671d4d82df1adc40 +Author: Naziah +Date: Thu Oct 17 23:19:51 2019 +1000 + + showing progression of lambda vals + +commit 3a97918021e6fb9a5d15edd1fe3a67121053afd3 +Author: Naziah +Date: Thu Oct 17 23:19:35 2019 +1000 + + showing progression of lambda vals + +commit 15ed3f94143a94814be26f0c7c91e8d6a295314a +Author: Naziah +Date: Thu Oct 17 23:17:08 2019 +1000 + + slight bigger photos + +commit 99ca8f9d16f1c02115280fa8ef110530881370bf +Author: Alexander Emmanuel K.J Lim +Date: Thu Oct 17 23:14:58 2019 +1000 + + update README.md added more specific details + +commit 0f4f0ba5c4ef35ab96fa154f6dc9598578636829 +Author: Naziah +Date: Thu Oct 17 23:11:20 2019 +1000 + + slight bigger photos + +commit 4c8e59b1e8c36d327728fbff769935e115db64a1 +Author: Naziah +Date: Thu Oct 17 23:10:55 2019 +1000 + + slight bigger photos + +commit c31173851faf7b0833a6eb433e6f3b35b9f1d452 +Author: Naziah +Date: Thu Oct 17 23:09:48 2019 +1000 + + slight bigger photos + +commit 0a946e716148d61421bb9cca704e4d453eb671b0 +Author: 1tanwang +Date: Thu Oct 17 23:02:33 2019 +1000 + + update test script + +commit 2cc72645edfba33d7d674903c0177d8d08a7395a +Author: Naziah +Date: Thu Oct 17 22:58:46 2019 +1000 + + more info to readme.md + +commit f28501d9993b1b35fc86a6bb0a9553a462798c26 +Author: Rushil +Date: Thu Oct 17 22:56:41 2019 +1000 + + Create Placeholders + +commit 81f02b280b6519129263d9ff6075ba257179a54d +Author: Naziah +Date: Thu Oct 17 22:52:55 2019 +1000 + + images side by side now resized to 0.6 or original + +commit b8e8dbe3a81a311d1a09bff25d7bd298de88993d +Author: Naziah +Date: Thu Oct 17 22:47:33 2019 +1000 + + pics side by side + +commit 8766fedeb4354afa50979aa5391adc42f6f6bd31 +Author: Naziah +Date: Thu Oct 17 22:45:43 2019 +1000 + + forgot to add output image for readme + +commit b1bd4f2b4cbb8aaf56c0c0bd13680e8cc59a5306 +Author: Naziah +Date: Thu Oct 17 22:44:09 2019 +1000 + + made it more ~abstracted~ + +commit 09d3616963b6d098f05e241e23e2019ce41aeabb +Author: Naziah +Date: Thu Oct 17 22:43:40 2019 +1000 + + added readme + +commit 09f81d294dc459550dce4426c47427f960a5ac90 +Author: Alexander Emmanuel K.J Lim +Date: Thu Oct 17 22:11:55 2019 +1000 + + change the content a little bit + +commit bf88b5085f584e2c933bd6e5b08476b75a9acfb5 +Author: Alexander Emmanuel K.J Lim +Date: Thu Oct 17 22:07:41 2019 +1000 + + README.md added + +commit 78b63ebf6f38010b54d66f994fafdf79e698b097 +Author: Naziah +Date: Thu Oct 17 22:03:18 2019 +1000 + + added commandline args + +commit 8aed5668b6331d96c91a0ba18606ded342bc1231 +Author: xiaoxuansaliha +Date: Thu Oct 17 21:54:37 2019 +1000 + + started the project + +commit 586bb7c8b9963fc5a18eb47bb5ca12170e131138 +Author: Alexander Emmanuel K.J Lim +Date: Thu Oct 17 21:28:45 2019 +1000 + + added top comment and credited Robert-Campbell for these awesome functions + +commit a28ca0900dde21dc391739f344697a8c5e72a76e +Author: Naziah +Date: Thu Oct 17 21:19:56 2019 +1000 + + export to .py file + +commit 9220dd908105abe9f3dcad57ecb0332c8b974466 +Author: Alexander Emmanuel K.J Lim +Date: Thu Oct 17 21:15:56 2019 +1000 + + function factorone added, comments added and fix some bugs in the factorPR function + +commit cf69e78c21fa2b8260a57579d8abae7dc2f9292a +Author: craigdeng +Date: Thu Oct 17 20:47:27 2019 +1000 + + Original function + + Original function of ski image histogram + +commit ef8fade87a8b039b491bbf172606f8537ab87de2 +Author: Ting-Chen Shang +Date: Thu Oct 17 19:45:42 2019 +1000 + + WIP - Trying to solve image affine transform .... + +commit 664701d3a402a04ec2f5fe1d252f9d14d90bbcec +Author: Naziah +Date: Thu Oct 17 19:19:12 2019 +1000 + + it WORKS + +commit 39d2486884ff4eab5b5540410a83732cd2feb264 +Author: Darcy Russell +Date: Thu Oct 17 19:12:13 2019 +1000 + + Changed algorithm paragraph in README + +commit b19249d408470e92231a80ea9211014648930800 +Author: satrfall6 +Date: Thu Oct 17 18:21:55 2019 +1000 + + Removed: remove duplicated folder + +commit 76ed3b0f7c5982a2defa18f03bfeebf032a70c84 +Author: satrfall6 +Date: Thu Oct 17 18:09:30 2019 +1000 + + Removed: removed unecessary directory + +commit 0f82f2b3b38a89e6382a827a1b283c189ecf956c +Merge: fb3c9975 756ce29f +Author: Lynn +Date: Thu Oct 17 17:58:11 2019 +1000 + + Merge branch 's46011424_sigmoid' + +commit 756ce29f5e0e8568a3c79307dad17197da8c345f +Author: Lynn +Date: Thu Oct 17 17:57:48 2019 +1000 + + modify some details in algorithm. + +commit fb3c997561d8bc439973ba82b646546f6cd48619 +Merge: 3c5947d2 4d5ea530 +Author: Lynn +Date: Thu Oct 17 17:52:55 2019 +1000 + + Merge branch 's46011424_sigmoid' + +commit 98b5a52cd3a2cb4df675d71d724b8df53a996dcf +Author: satrfall6 +Date: Thu Oct 17 17:52:18 2019 +1000 + + Fixed: typo in README + +commit 4d5ea53089b9533215c3f3623a85049ad4b67621 +Author: Lynn +Date: Thu Oct 17 17:51:45 2019 +1000 + + update the algorithm and test function. + +commit 29e6f5490560efa89e1ffee284a82eee5ce910cd +Author: 1tanwang +Date: Thu Oct 17 17:48:45 2019 +1000 + + update from pixel-based to tensor-based implemetation + +commit 3c5947d2007cd23f43b1521749b22b010fd1371f +Author: Lynn +Date: Thu Oct 17 17:47:40 2019 +1000 + + update the algorithm and test function. + +commit 67cd2628382afe95cc676935a05de77c44bdb1eb +Author: satrfall6 +Date: Thu Oct 17 17:46:42 2019 +1000 + + Finalized: README.md file + +commit 719096fffa45b943c850c2cc10a156b51fe9e914 +Author: satrfall6 +Date: Thu Oct 17 17:43:20 2019 +1000 + + Formatted: README.md + +commit 02f97e653b21eaf78340f1893db996ba134eda52 +Author: satrfall6 +Date: Thu Oct 17 17:31:56 2019 +1000 + + Updated: README.md and torch_test + + added description to algorithm in README. finalized the test case + +commit bb0eeef4e3760b1e9dd3687fe7c21317e2c6794d +Author: Ting-Chen Shang +Date: Thu Oct 17 16:43:44 2019 +1000 + + Resolved and finished padding section. + +commit 7860f64cee2a5fe84f761992173ac3e8089370ac +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Thu Oct 17 16:26:55 2019 +1000 + + Update histogram.py + + Add documentation of histogram.py + +commit 3825817d9bcdddab3f4e6721b033dd9ae5f99355 +Author: satrfall6 +Date: Thu Oct 17 15:53:51 2019 +1000 + + Fixed: the issue of test case 1d 3d and 4d + + the denoised std wasn't less than the original, changed the function of normalizing imgage from line 147 to 150 + +commit addd308f814e8e89312f67e81eb7489b413a2514 +Author: qg007110 <37200438+qg007110@users.noreply.github.com> +Date: Thu Oct 17 15:19:35 2019 +1000 + + Update README.md + + changed the example output + +commit 4ba43d9be7fc83176777e736109cee7d2714ce99 +Author: Guan +Date: Thu Oct 17 15:17:13 2019 +1000 + + readme file upload + +commit 5a92884545660d0eb886c4d517ecf375bb36094c +Author: Guan +Date: Thu Oct 17 15:16:26 2019 +1000 + + added the tester's input image and the output images + +commit 919cf24a2f2716790ee2b2a7e32504d568967ab8 +Author: Guan +Date: Thu Oct 17 15:14:23 2019 +1000 + + Changed the name of the function file and added the tester + +commit d54f4423f5ead31f63f15eae35c6b12e81883547 +Author: Naziah +Date: Thu Oct 17 14:58:10 2019 +1000 + + if u ran it twice it technically did the right thing + +commit fe531f59568dc5e893f8ac2d001a367ea06b6b9f +Author: Unknown +Date: Thu Oct 17 06:40:00 2019 +0200 + + Improved commenting of functions in modules + +commit 45c5a4d757445b0c145796146d92d2b12f231dd5 +Author: Rushil +Date: Thu Oct 17 14:38:54 2019 +1000 + + added plotting + +commit 7234a896f9617f9b8876e6c70c03683b207baefa +Author: Naziah +Date: Thu Oct 17 14:32:25 2019 +1000 + + removed a sneaky np.diff + +commit 6431c3fad0ec2420d07ba7f74fbc40f35578981f +Author: Naziah +Date: Thu Oct 17 14:26:31 2019 +1000 + + works, but blue + +commit e766e121c8282559f5110c0f619993a1530d97e4 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Thu Oct 17 15:06:47 2019 +1100 + + Update sobel_vertical.py + +commit 1b2d8cdddcc094fa74868ab64f05594f8fa673bd +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Thu Oct 17 15:04:40 2019 +1100 + + Update sobel_horizontal.py + +commit 2f542264af178baf860a7fcf650538d71e936c2e +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Thu Oct 17 15:01:08 2019 +1100 + + Update README.md + + Final Update + +commit f666fbad22d6d63a8f11df0ac3bafacbb39b3315 +Author: 1tanwang +Date: Thu Oct 17 13:43:07 2019 +1000 + + main algorithm before check + +commit 33bb19f0274051ccd74c72abcad578a6f2275a5c +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Thu Oct 17 14:33:02 2019 +1100 + + Update README.md + +commit e7e330d836fd20790dd7b33ba285ae9edc81aaa7 +Author: Rushil +Date: Thu Oct 17 13:30:20 2019 +1000 + + import tenosrflow + +commit d86851338a70aad6624e084186293a3d808fb047 +Author: Naziah +Date: Thu Oct 17 13:29:15 2019 +1000 + + crying happy and sad tears because this runs but doenst output the right image yet + +commit 6604e9938477815f9c6f2c9e19fa7c55c32bd53c +Author: Rushil +Date: Thu Oct 17 13:21:53 2019 +1000 + + initial + +commit 74c03bc1b991ecbace4df421a504e6274576a7b7 +Author: Guan +Date: Thu Oct 17 13:21:47 2019 +1000 + + Created a folder and added the function + +commit 289986cdacbc07a375fbf3637314f5d07264bb1a +Author: satrfall6 +Date: Thu Oct 17 12:46:33 2019 +1000 + + Updated: add the description for the README.ms file + +commit 5963b1917feeadc80d9e3b3486d001c9d83a9cd5 +Author: Unknown +Date: Thu Oct 17 04:44:40 2019 +0200 + + + Comments added + + Commenting of functionality in classes and modules + +commit 728d42e20224cf5b5c41240060fd1b24dc06068d +Author: Unknown +Date: Thu Oct 17 04:36:13 2019 +0200 + + Implemented Extended Euclidean algorithm as class + +commit eef08bdb0db8ca91069397235407a2c10add4c1f +Author: Unknown +Date: Thu Oct 17 04:28:08 2019 +0200 + + Minjor changes + +commit 2b76bf6385fd6f9fbb4891aae7a5ecb072e90038 +Author: Unknown +Date: Thu Oct 17 03:52:00 2019 +0200 + + Implemented Euclidean algorithm as module + +commit f296082a2a5bae4506604434d386efe4c9c2d7c1 +Author: Unknown +Date: Thu Oct 17 03:49:24 2019 +0200 + + + Added quotients to output + + Forgot before... + +commit 72008916389ee83cd2cf9c07728e9888edf53010 +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Thu Oct 17 11:47:18 2019 +1000 + + Update Readme.md + +commit 50a21d8f0c60ae3d52cc8d983415fbe70408491f +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Thu Oct 17 11:46:40 2019 +1000 + + Update Readme.md + +commit 5db9d95058d5214b83ed51a7ad1476fae99f4580 +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Thu Oct 17 11:45:44 2019 +1000 + + Update Readme.md + +commit 01735e44e10f8bdf5bdc8e3da7c98ce8bd6df440 +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Thu Oct 17 11:45:18 2019 +1000 + + Update Readme.md + +commit e3b6027adbcccdf4b2f369fd5da700a2efe45329 +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Thu Oct 17 11:44:05 2019 +1000 + + Update Readme.md + +commit 36665e625c3e236d3d4d10ac84d484372cb42af9 +Author: Unknown +Date: Thu Oct 17 03:43:25 2019 +0200 + + Extended Euclidean Algorithm - Uncommented + +commit fe273fafbcf19dcc4dbacfc223c4baf29610f87a +Merge: dbc6428e 1d153960 +Author: tshang +Date: Thu Oct 17 11:42:54 2019 +1000 + + Merge branch 'topic-algorithms' of https://github.com/stryt2/PatternFlow into topic-algorithms + + # Conflicts: + # transform/s4371869_radon_transform/radon_transform.py + +commit ac75e2e31532ed873f857b275052c0d6d986c14e +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Thu Oct 17 11:39:34 2019 +1000 + + Update Readme.md + + change format + +commit dbc6428e596bfedf9a2abd56bf0edefc9960f20b +Author: tshang +Date: Thu Oct 17 11:39:19 2019 +1000 + + Implementated a bit of radon_transform.py and main. + +commit 6e6b6595bfff4076dd8857f6794da1f730621161 +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Thu Oct 17 11:35:29 2019 +1000 + + Update Readme.md + + added outline, author , acknowledgments + +commit 25eca0fd29a162086cbf2942321612df6184d502 +Author: Lewis B +Date: Thu Oct 17 10:33:35 2019 +1000 + + Bit more documentation + +commit b8b55494e66c43241ba6a4e564b4e10418c1b9fe +Author: Lewis B +Date: Thu Oct 17 10:29:33 2019 +1000 + + Add README + +commit bcdefb90ddebeeed4b7dd69da0f9d905f756a7fc +Author: Lyndon-Huang <54804243+Lyndon-Huang@users.noreply.github.com> +Date: Thu Oct 17 10:24:52 2019 +1000 + + Create Readme.md file for NumberThy algorithms + +commit 003d947739ca1acd9a9e3cdd2fdc3d617898866a +Author: “xuannan +Date: Thu Oct 17 10:16:03 2019 +1000 + + added all the description of all function, added is_primitive_root function, finished the test for TSRsqrtmod function, added a helper function--tonelli + +commit cac27d817ee66bdda804a124ea39bfcfa9adec66 +Author: Lewis B +Date: Thu Oct 17 09:55:11 2019 +1000 + + Remove unused import and document the builtins + +commit dca0814da4d47a84efec7cb49941f861a04022b0 +Author: satrfall6 +Date: Thu Oct 17 09:48:45 2019 +1000 + + Updated: create a new directory 45033027 to place my file + +commit 44c247605fd883eef29bf85c63447a199b54de21 +Merge: 8d0ef010 dcf06fbd +Author: satrfall6 +Date: Thu Oct 17 09:44:41 2019 +1000 + + Merge branch 'topic-algorithms' of https://github.com/satrfall6/PatternFlow into topic-algorithms + +commit 8d0ef01035b95ec464530b969552049d0588b491 +Author: satrfall6 +Date: Thu Oct 17 09:21:16 2019 +1000 + + Updated: added test_denoise_tv_chambolle_multichannel in torch_test + +commit dcf06fbd03cc171cda970a88f4159a31c2f5a1ff +Author: satrfall6 <37202975+satrfall6@users.noreply.github.com> +Date: Thu Oct 17 08:54:28 2019 +1000 + + Edited: the link of image + + the image couldn't be seen, now it works + +commit d9578b91650ec394e00aad6b1c8753d3932878b9 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Thu Oct 17 09:52:58 2019 +1100 + + Update README.md + +commit 6896277d1938ed98c9185694ea251130ccfd8cfa +Author: satrfall6 <37202975+satrfall6@users.noreply.github.com> +Date: Thu Oct 17 08:52:51 2019 +1000 + + Updated: Readme.md + + added descriptions for the environment, algorithm, and result + +commit 78bc72da8e974c663de069ad8e563e516fba51f4 +Author: “xuannan +Date: Thu Oct 17 00:30:26 2019 +1000 + + done: added euler_criterion function, fixed the bug of carmichael function. testing the TSRsqrtmod function + +commit ce408fb9117cfe51ce1e56e5002e1e8c9659ee1b +Author: Lewis B +Date: Wed Oct 16 22:21:34 2019 +1000 + + Fixes and improvements + +commit dc87c42e5981dd590c925a2c13325707b9aec3af +Author: 1tanwang +Date: Wed Oct 16 21:51:12 2019 +1000 + + create test script main.py + +commit 7cd506d3b1d30e4729ff38073cabd6ef86a6d1f5 +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Wed Oct 16 20:03:47 2019 +1000 + + Complete the README.md + + Complete the README.md: add the function dependencies and add some explanation about the examples + +commit df4ea3e4b2ae3681a3fd06c60f1a6784ed479a37 +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Wed Oct 16 19:41:11 2019 +1000 + + Complete the Principle part of README.md + + Complete the Principle part of README.md, rename the example picture and add another picture to serve the Principle part of README.md + +commit e30e6c1657b115c233472c6167aa797a80f309c3 +Author: JNRuan +Date: Wed Oct 16 19:16:05 2019 +1000 + + Changed -b arg to float instead of int, the latter throws an error. + +commit 4abe1f5a4dc053d34cfb6e35eabe325b5f04fc75 +Author: mubiquity +Date: Wed Oct 16 19:09:28 2019 +1000 + + Moved README images into table + +commit 02623311fc9835f7072886ebbc4bdc0e2be120b9 +Author: mubiquity +Date: Wed Oct 16 19:04:22 2019 +1000 + + Added student number to README + +commit 5f303f4f4113107646cb0a99243e66a27ffaa773 +Author: mubiquity +Date: Wed Oct 16 19:01:38 2019 +1000 + + Small improvements to README wording + +commit 2db0fa23c3cfc067af00fe322c902add740f8a2b +Author: mubiquity +Date: Wed Oct 16 18:50:47 2019 +1000 + + Added example usage (driver) script + +commit f51b41facb9061d3a2268616619b7aa3f52098cb +Author: mubiquity +Date: Wed Oct 16 18:32:16 2019 +1000 + + Expanded explanation in README and added references + +commit 314af31b78dcd393b27b85c7ccfc4cdb602a0b26 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 19:32:09 2019 +1100 + + Update 42370057_README.md + + updated description + +commit 935faec7be2b9b676082bf71ea0c9614f79051bd +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 19:28:41 2019 +1100 + + Update 42370057_README.md + + update + +commit de69143b97a0721b033b2f2637d938a7d8e8aad2 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 19:28:01 2019 +1100 + + Update 42370057_README.md + +commit fcb90628a4fa6780cb511e9f04fdd911f3d1e7eb +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 19:26:15 2019 +1100 + + Update 42370057_README.md + +commit 8b261989782b72b86d2be3e4b33c43e9e90ca4ec +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 19:24:44 2019 +1100 + + Update 42370057_README.md + +commit 89177c98ebd9405c4141e79cd7dd4bedabd546b8 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 19:24:06 2019 +1100 + + Update 42370057_README.md + + added example usage + +commit 1727da5f5d467d6b52c8ab0ac1ebfd2c8b10841f +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Wed Oct 16 18:20:40 2019 +1000 + + Update README.md and create a folder to store images + + Update the README.md file: set colors of text, rearrange the structure of the file, set TODO tasks. And create a folder to store the images. + +commit ff5fad744ba734ed32e44ddaf3be2efb91f369f1 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 19:14:17 2019 +1100 + + Update 42370057_README.md + + update + +commit 26d0963d284c5898445efd1977beb35507d86b62 +Author: Cameron +Date: Wed Oct 16 19:12:19 2019 +1100 + + renamed, checked run on desktop + + renamed, checked run on desktop + +commit 86e3cfcadcac366e791770b396d6d556ef1980a2 +Author: Lewis B +Date: Wed Oct 16 18:06:19 2019 +1000 + + Make driver script useful + +commit a1b6b70697a2871d71624ce50a4405600a232542 +Author: JNRuan +Date: Wed Oct 16 17:57:36 2019 +1000 + + Fixed minor bug that was introduced from refactor by error in variable name. normin_v2 was mistakenly also named normin_v1 which then caused issue with concatenation, as well as wrong values. + +commit f1b3e14552e329dfb948288fedd2a0ed3fdaeee8 +Author: JNRuan +Date: Wed Oct 16 17:55:14 2019 +1000 + + Additional refactor of variable names that was missed in previous commit. Again to standardise with what the authors called the steps involved in matlab code. + +commit fe9aefabf8b9107a5c2a85359a9b48dfc648421e +Author: JNRuan +Date: Wed Oct 16 17:51:13 2019 +1000 + + Changed variable names to match author conventions in matlab for easier comparison. + +commit 536494c9bcb240321bcbc5ef03e0a9b48a049976 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 18:36:35 2019 +1100 + + Add files via upload + + separated function from driver + +commit 50179c22c4397d192f966a9fe54f1cb4bd8d5a61 +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Wed Oct 16 17:35:23 2019 +1000 + + Create README.md + + Create README.md, and write the description and example parts + +commit b84919b508bcbb394f0ed0d38583dab5bb977c07 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 17:33:06 2019 +1000 + + Update 42370057_README.md + + README description + +commit 2ad694392f5572c6ea6c0f8bba61d51be6ac7e52 +Author: JNRuan +Date: Wed Oct 16 17:31:17 2019 +1000 + + Fix example text in Readme. + +commit 51a1b4dc0853808e54a33daabe472acb6dad7dc7 +Author: JNRuan +Date: Wed Oct 16 17:28:49 2019 +1000 + + Added missing return comment in docstring of smoother function. Replaced example image with a better demonstration. + +commit 33945311efcb904a95499c52f34207117b712563 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 17:22:50 2019 +1000 + + Create 42370057_README.md + + created readme + +commit a1dfb5686966fd69dd57fc6cabe4feb92029473f +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 17:21:31 2019 +1000 + + Rename 42370057_algorithm.py to image/42370057_algorithm.py + + directory + +commit 1d1539606e5b8a08e51f8711896f2ddb25c8fa01 +Author: Ting-Chen Shang +Date: Wed Oct 16 17:20:48 2019 +1000 + + Ported more tensorflow implementation for the non circle case. + +commit 20c3e926ccd810066fb15139ff7b94ad1d3a8423 +Author: JNRuan +Date: Wed Oct 16 17:15:10 2019 +1000 + + Formatting and added more details about the algorithm. + +commit 379cea088bd26b2f200158adeaedf506b4bbbae5 +Author: JNRuan +Date: Wed Oct 16 17:10:03 2019 +1000 + + Comments and documentation, upload example image. + +commit ff8d9872ba409d46d42625de2df42b82903c019a +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:57:32 2019 +1000 + + Update README.md + +commit 0bd37354242df65bd6255fbf550099188228d004 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:54:17 2019 +1000 + + Update README.md + +commit 7bdef1f4f1246378fbb961f45baf413945eba42d +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 16:52:23 2019 +1000 + + Delete cg_algorithm.ipynb + + delete .ipynb file + +commit 8a280f8c70f7c5d2fd2e58e132a82dbb0dfff434 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 17:51:49 2019 +1100 + + Add files via upload + + added .py version rather than .ipynb + +commit 009962f6b7d21584597d8736249fefbe62ff550e +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:50:46 2019 +1000 + + Update README.md + +commit 78de22153d84148276ac5011fa95781d4800c584 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:48:56 2019 +1000 + + Update README.md + +commit da1ec5d22d44c334f3fd2fe2c44b27752ae95a85 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:43:24 2019 +1000 + + Update README.md + +commit a61e09734c2c875b5b723c9cc1c2abb2beda1d0d +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:42:53 2019 +1000 + + Update README.md + +commit a75372f5dbe8f50bdbec97ac104d3be944e1a3c4 +Author: JNRuan +Date: Wed Oct 16 16:42:27 2019 +1000 + + Added quick driver script that takes arguments with default settings - use driver.py -img bengalcat.jpg for usage. + +commit c71dd0290e80a2895427aeae63e784aa0322e6de +Author: JNRuan +Date: Wed Oct 16 16:41:56 2019 +1000 + + Cleaned up some parts, added visual indicator that the algorithm is working. Updated docstrings especially with attribution/acknowledgement. + +commit a771c9897866fffbfcda7bb659ec0e026a278af1 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:40:54 2019 +1000 + + Update README.md + +commit 7a9876b2a562cf35796b78e91c778fa96f3dba8d +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 16:40:44 2019 +1000 + + Delete 42370057-alg + +commit fbcafb798357a8b56109d4d07e119f6d46c41814 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:37:00 2019 +1000 + + Create README.md + + Creating README + +commit 8328748c523de0d1913f9659a9296a552635809a +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:31:02 2019 +1000 + + Updated with only Tensorflow + +commit f8be3ab3a06f68e476de4047f7871ab3609ce129 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 17:31:00 2019 +1100 + + doc strings + +commit fd6006d48e9fcdbe86cd42d2ff5b9eab102fba8e +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:27:25 2019 +1000 + + Fixed with the driver script + +commit b7fab01cf4561205a6c421d3686553f703df98ae +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:23:14 2019 +1000 + + Simulated Images + + Using Sobel_transformation_Working Jupyter Notebook + +commit 564706cc85e5f33f2fa7a47ff1b666cc826edd98 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 17:22:15 2019 +1100 + + formatting + +commit f65fb45cb6ce7ccab479e87520696140ea012f22 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:21:51 2019 +1000 + + Working Sobel Algorithm + + In Jupter Notebook + +commit cc9dc0d8fa9e338df575eeb04bae42c8353c1528 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:20:59 2019 +1000 + + Delete Sobel_transformation_Working.ipynb + +commit a5c1d99af96d4430df5267d90d70e28d6db18efd +Author: JNRuan +Date: Wed Oct 16 16:17:40 2019 +1000 + + Fixed major bug, now using tensorflow tf.signal.fft3d for fast fourier transform on (n, m, c) dimension tensors. Algorithm working as intended and produces a smoothed image though is not optimised. + +commit 4c77d4c02149a7c1e9281d578f7d73ceb50c5f56 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:16:34 2019 +1000 + + Delete Sobel_Horizontal_Edges.png + +commit d6d23cb06856d203ab697dc25a67c4f9575f93ce +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:16:23 2019 +1000 + + Delete Sobel_Edge_Magnitude.png + +commit 439ce0a42ced6e4d150083b6c1fbe188aeb3ade5 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:16:15 2019 +1000 + + Delete Sobel_Vertical_Edges.png + +commit cae8024f73e7947988ba2aa8acfb217ae62f7bc0 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 16:14:00 2019 +1000 + + Sobel Transformation + + Jupyter Notebook Working + +commit d5e0527eea8829f019692e501a4f81c208d36212 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 17:13:56 2019 +1100 + + running_script + +commit 73e369161f1c52d309ceddf536ff89f5df7c6491 +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Wed Oct 16 15:47:46 2019 +1000 + + Create test.py + + Create the test.py file to stroe the testing example for downscale_local_mean function + +commit 3f4d2e1b101ac5855310830f296c20efaf2bd6b2 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 15:43:45 2019 +1000 + + Delete Sobel_v.ipynb + +commit 207df733337095ef72998e035b4ecc0dba84017e +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 15:43:29 2019 +1000 + + Delete sobel_h.ipynb + +commit d757e5cb4b159421d2e0c0288206ac9772f340b8 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 15:43:09 2019 +1000 + + Delete Sobel_h.ipynb + +commit 5172535b3924eba2e5d7d51371e5ac8a4e4c36e2 +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Wed Oct 16 15:42:25 2019 +1000 + + Change the input and output type of the function + + Change the input and output type of the function downscale_local_mean from 'ndarray or tensor' to 'ndarray' and correct a tiny typo + +commit 68340c69d9a53adafed146b64fca865413f92e82 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 16:41:49 2019 +1100 + + updates with 2.0 + +commit c2e4ccdbd34b341845942f7abd9d6294d68c0307 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 15:40:56 2019 +1000 + + Delete Sobel_transformation.ipynb + +commit 8865b336ec713624696b3b1a30ae8535b8d06fd1 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 16:24:10 2019 +1100 + + updated to tensorflow 2.0 + +commit ab84a38f5ed4e0f8c10324f66801cb85d2358d39 +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Wed Oct 16 15:23:10 2019 +1000 + + Close every session + + Add session.close() for every tf.Session() + +commit a1f44126841c035a01a738efeb2b915fd1a1927f +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 15:13:31 2019 +1000 + + Sobel Transform Images + +commit 682d8e330c2775a5148409ecf5d9fbc1c409eb0d +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 15:12:28 2019 +1000 + + Initial Commit + +commit 1ea48834b82bd073ef8de13fe91f32f139f9ce7f +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 14:43:31 2019 +1000 + + Initial Commit - Jupyter Notebook + + Working version without driver script + +commit b6e2a2a2c711701c0021ea43ba484fa2509dafa8 +Author: JNRuan +Date: Wed Oct 16 14:43:25 2019 +1000 + + Subproblem S initial part - computation of the second part of the numerator for function. + +commit 2919b694782a31b526b8efb8c37ff6ae123ce826 +Author: JNRuan +Date: Wed Oct 16 14:25:35 2019 +1000 + + Implemented h-v sub-problem, fixed bug where S was not initialised as image with dtype=float32. + +commit bafff3035da937c69fa9f7d973dcc148f782b9bf +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 15:15:46 2019 +1100 + + updates to data_types + +commit 6c41d3a92f680a5d472fe1c9adc42c831674be83 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 15:09:27 2019 +1100 + + Included raccoon testing image + +commit 48953bf9c3b63927b196666c4db1a1ad166e8d08 +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Wed Oct 16 14:02:34 2019 +1000 + + Update README.md + +commit e744b897164dadd5e9c9a91f8777f67507ad6ea4 +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 16 14:58:43 2019 +1100 + + Created using Colaboratory + +commit 2656523b105b01f2b9ac0af88be6ccd92b41a236 +Author: Jingwei WANG +Date: Wed Oct 16 13:58:35 2019 +1000 + + update result img + + previously used a wrong parameter which the orginal img has been passed in. Currently the noised img will be passed in. + +commit f3a77f91bb2141adbbe965abf5859c22d2786ea2 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 13:36:58 2019 +1000 + + Vertical edges using Sobel Transform + +commit ab42cca919570ddce8b66f11865d6910a185f48b +Author: Alexander Emmanuel K.J Lim +Date: Wed Oct 16 13:35:10 2019 +1000 + + added factorPR but has not added any comments yet will do soon + +commit 3f844f02f042d6a3825bf9c6bd5b3cdd8cf8b3ca +Author: qg007110 <37200438+qg007110@users.noreply.github.com> +Date: Wed Oct 16 12:40:24 2019 +1000 + + Update README.md + +commit 78d26a5bff921baa8dcc84cd5f15e629e8cd8b77 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 12:39:06 2019 +1000 + + Horizontal edges using Sobel Transform + + Jupyter Notebook + +commit 2d367c9eec8ed268831929b95a5a20d708bebd4b +Author: qg007110 <37200438+qg007110@users.noreply.github.com> +Date: Wed Oct 16 12:38:14 2019 +1000 + + Update README.md + +commit 1d36008dca8d527d3ecc1d910255661547ca2fb9 +Author: vaibhavi5 <39690333+vaibhavi5@users.noreply.github.com> +Date: Wed Oct 16 13:36:56 2019 +1100 + + Horizontal edges using Sobel Transform + +commit d8cad1929d59cb483b03cfb1d6a0788109441a6e +Author: qg007110 <37200438+qg007110@users.noreply.github.com> +Date: Wed Oct 16 12:36:39 2019 +1000 + + Update README.md + +commit 676fa76972f346ffd14f3096aec8dcd72aa3d115 +Author: qg007110 <37200438+qg007110@users.noreply.github.com> +Date: Wed Oct 16 12:29:14 2019 +1000 + + Update README.md + +commit df2990f81b7e7ea4a33894cfc51f2476476ea190 +Author: qg007110 <37200438+qg007110@users.noreply.github.com> +Date: Wed Oct 16 12:28:32 2019 +1000 + + Update README.md + +commit e78eaf70c9e1c80cb57e3f9ec625f5c06dc254a3 +Author: Guan +Date: Wed Oct 16 12:26:14 2019 +1000 + + First uploading + +commit 9a6401b7e86498ef3f4345fe4b2b950127154fcb +Author: Lynn +Date: Wed Oct 16 11:49:44 2019 +1000 + + Update the test file which compare the result of my function and orginal adjust_sigmoid function. + +commit 9ff66772960eb29bebf3550c0ce1b006cc138f3e +Author: JNRuan +Date: Wed Oct 16 11:25:35 2019 +1000 + + Adjusted code, due to misinterpretation of purpose of pre-calcs. They are part of either the numerator or denominator for the main sub-problem computations. + +commit f711c45f0e1224b67a9c988fea742f046f554748 +Author: JNRuan +Date: Wed Oct 16 11:20:42 2019 +1000 + + Initial calculations of some parts of the two sub-problems presented in algorithm based on matlab code from authors of algorithm. + +commit 39c19a9f1f708524804a4f809b9eae086ee4544a +Author: JNRuan +Date: Wed Oct 16 10:53:35 2019 +1000 + + Initial processing in main algorithm for otf and target image. Fixed some errors in docstrings. + +commit 55509c4a932a684489a462179515de73efd504ae +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Wed Oct 16 09:21:19 2019 +1000 + + Update: "finsh version of main.py and README" + +commit 37a02ddd474181e267e240f570b79c9725eb6f30 +Author: Alexander Emmanuel K.J Lim +Date: Tue Oct 15 23:51:08 2019 +1000 + + added is_prime function isprimeE function and isprimeF function there are some minors problem with the is_prime. eg. it cannot evaluate too big numbers. will fix later + +commit c51e6ed21308342a3cc8a8350e861fc98d1bb438 +Author: JNRuan +Date: Tue Oct 15 23:09:29 2019 +1000 + + Inclusion of small bengalcat.jpg test image with CC BY-SA 2.0 attribution. + +commit 5f564b6cfa945a4bdcd62523b865c601d9849984 +Author: JNRuan +Date: Tue Oct 15 23:08:02 2019 +1000 + + Implemented conversion of Fx and Fy psf to otf with fast fourier transform via tf.signal module. + +commit 88f754735778de575e19afa266ad6742732f39c8 +Author: satrfall6 +Date: Tue Oct 15 22:58:08 2019 +1000 + + updated: add main in torch_test and finish test + +commit f4f7155057221ab4ae5e00f49b3e296824b62fb5 +Author: satrfall6 +Date: Tue Oct 15 22:56:28 2019 +1000 + + updated: test_denoise_tv_chambolle_weighting in torch_test + +commit 9690a54b9003bd0e55111dce0c29b81a441e75d9 +Author: satrfall6 +Date: Tue Oct 15 22:55:43 2019 +1000 + + updated: test_denoise_tv_chambolle_4d in torch_test + +commit 3e9aae7899b17c4c39725a1c37075699aea4addd +Author: satrfall6 +Date: Tue Oct 15 22:54:53 2019 +1000 + + test_denoise_tv_chambolle_1d in torch_test + +commit e390190c6f6ec2ff9bb6eea3ad5bd40b51bb52f8 +Author: satrfall6 +Date: Tue Oct 15 22:53:44 2019 +1000 + + test_denoise_tv_chambolle_3d in torch_test + +commit 5e1f605d2c3000b6cf6d9280442dc5d2448dfd8c +Author: “xuannan +Date: Tue Oct 15 22:52:21 2019 +1000 + + doing TSRsqurtmod function, carmicheal_lambda function. done:euler_phi function + +commit 70046d325dc6984631634c296b1736569d395c42 +Author: satrfall6 +Date: Tue Oct 15 22:45:38 2019 +1000 + + updated: test_denoise_tv_chambolle_float_result_range in torch_test + +commit dfdd922549fa51bbaceb1644129e3eaf0962cf01 +Author: satrfall6 +Date: Tue Oct 15 22:44:43 2019 +1000 + + updated: test_denoise_tv_chambolle_2d in torch_test + +commit bdcb657e5222854ce4816b012309b020cdff63df +Author: satrfall6 +Date: Tue Oct 15 22:42:23 2019 +1000 + + fixed: torch_denoise_tv_chambolle now return tensor within 0 1 + +commit 434e053cfd2e7eb4d2ab6b06b9e2c39a12819487 +Author: Lewis B +Date: Tue Oct 15 22:22:10 2019 +1000 + + Slight improvements + +commit fccc7325e34d013ae085d0ef64bfbf49f160fcb1 +Author: Lewis B +Date: Tue Oct 15 22:17:33 2019 +1000 + + Improvements + +commit 685dbbba45c5750c62c083ddd99e4d17bb44c16c +Author: JNRuan +Date: Tue Oct 15 22:13:26 2019 +1000 + + Added padding function to pad initial psfs for preprocessing part of algorithm. + +commit e64cdd213ff1ad3a3c529190c9b577696d44858a +Author: Lewis B +Date: Tue Oct 15 22:09:53 2019 +1000 + + Add driver + +commit ff26679079787e0f74a42500da2900b089458b62 +Author: Lewis B +Date: Tue Oct 15 22:09:14 2019 +1000 + + Extract limit code + +commit 4553940c6e3a1b876fc88ea41311dc6564fe4b3c +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Tue Oct 15 21:20:52 2019 +1000 + + Add the usage of the algorithm + +commit de99bac052efb0bbb9d8db02190277d0ca0235ac +Author: JNRuan +Date: Tue Oct 15 20:21:14 2019 +1000 + + Initial commit. Created empty functions for driver and l0 smoothing. + +commit d0fd60cf74bf66c2850939caae19cf06bfb5ccc6 +Author: Lewis B +Date: Tue Oct 15 19:15:43 2019 +1000 + + Int centers & added guards + +commit 2648ca31348fb4a56edde935b483552f45c7b512 +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Tue Oct 15 19:14:29 2019 +1000 + + Complete the body of helper function as_strided + + Complete the body of helper function as_strided and roughly complete downscale_local_mean.py + +commit a7b1818dfec48519a326f5b1ae4befb42213ec91 +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Tue Oct 15 19:01:49 2019 +1000 + + Set the needed helper function and class for as_strided function + + Set the class DummyArray and helper function _maybe_view_as_subclass to serve as_strided + +commit 2334ac1c9edd943ddd5db5b23cc71b1e7f0b8ef3 +Author: Lewis B +Date: Tue Oct 15 18:54:10 2019 +1000 + + Make get_centers use tensorflow + +commit e4a7e81ce9d33e6273860ca66fc7057cc4041629 +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Tue Oct 15 18:52:55 2019 +1000 + + Create the helper function as_strided + + Create and write the description of the helper function as_strided + +commit 25046c80d898da3fd5b030b71074fb3458c3f99e +Author: Lewis B +Date: Tue Oct 15 18:50:36 2019 +1000 + + get_centers works (non-tensorflow) + +commit 8ccd03223c8326acdc459112d328ba43102cf114 +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Tue Oct 15 18:41:56 2019 +1000 + + Complete the function body for the helper function view_as_blocks + + Complete the function body and add comments for the helper function view_as_blocks + +commit 4e4e361dc03d4747d38f2630db1b39206c31f4eb +Author: RoyUQ <36979636+RoyUQ@users.noreply.github.com> +Date: Tue Oct 15 18:19:23 2019 +1000 + + Updated the references in README.md + +commit 0d5a83e0ca60e247acde5f59bddd7958e53974a5 +Author: RoyUQ <36979636+RoyUQ@users.noreply.github.com> +Date: Tue Oct 15 18:13:45 2019 +1000 + + Updated README.md + +commit c827ccf85f62998aafec13691b7960c9d6642299 +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Tue Oct 15 18:08:28 2019 +1000 + + Create the helper function view_as_blocks + + Create and write the description for the helper function view_as_blocks + +commit 04ccd2978c6c83e868e004beffcb3aaafd1a2795 +Author: ROY +Date: Tue Oct 15 18:07:21 2019 +1000 + + Added README.md + +commit 0eb2bdd3a4c70d376164e506d9fecbf1df119d2a +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Tue Oct 15 17:51:33 2019 +1000 + + Complete the function body for helper fucntion block_reduce + + Complete the body and add comments for helper function block_reduce + +commit e45d1933ee368f921a85bb23d6f3839a55f09a59 +Author: Loris Rossi +Date: Tue Oct 15 17:50:47 2019 +1000 + + Update README.md + +commit 738393d89463d26098d51ce10d58fa880cb15072 +Author: Loris Rossi +Date: Tue Oct 15 17:44:38 2019 +1000 + + Update README with description of the algorithm + +commit fb08869c7b43c788cc4f0e5753d897d58c1b5894 +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Tue Oct 15 17:36:34 2019 +1000 + + Add the output graph (image and histogram) + +commit 47d2281ebc5b78e566877616732d13249468d305 +Author: Loris Rossi +Date: Tue Oct 15 17:34:51 2019 +1000 + + Complete main script with correct visualisation of adjusted image + +commit 8243fb3c64729ee40dd63ccb08e53dcdbdc8e0bb +Author: askar +Date: Tue Oct 15 17:34:30 2019 +1000 + + more style adjustments of README + +commit 21f3e22216dc54f580bcfdd799c20d1a725289fe +Author: askar +Date: Tue Oct 15 17:33:37 2019 +1000 + + minor adjustments of README + +commit d7f98f8ea2c8418748ecaed8ff377286db4323ac +Author: askar +Date: Tue Oct 15 17:32:55 2019 +1000 + + minor adjusts of README + +commit d11b659f2a994a2b7d4bea719b1ca97f7f5db622 +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Tue Oct 15 17:31:10 2019 +1000 + + Add files via upload + +commit c325ba79fb21e6424fa58ea587084c6fd706b61d +Author: askar +Date: Tue Oct 15 17:30:43 2019 +1000 + + resized sample images + +commit 7c5b60d2760a3a2fdf7aca7b5be6603b299143f0 +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Tue Oct 15 17:20:23 2019 +1000 + + Complete the discription of how the algrithm work + +commit 66555998601f063dc37340388133beba324915ae +Author: askar +Date: Tue Oct 15 17:18:42 2019 +1000 + + clarification of return values in README + +commit 52aec28ba867e0cdcabbb0d5028024192fa32c38 +Author: Loris Rossi +Date: Tue Oct 15 17:16:33 2019 +1000 + + Implement adjust_gamma + +commit 6a9602434459f94268ab89f032032867651d0465 +Author: Loris Rossi +Date: Tue Oct 15 16:54:57 2019 +1000 + + Implements dtype_limits function + +commit e7ccf9ee4412dca3c0afc8c95f394133d6dde96c +Author: askar +Date: Tue Oct 15 16:51:10 2019 +1000 + + minor updates to main.py + +commit f13f52f1d94de4bbf49ec476c921650b9d19265e +Author: askar +Date: Tue Oct 15 16:49:40 2019 +1000 + + edited README.md + +commit d359e301cb94d113dd9a0425c009734872744464 +Author: askar +Date: Tue Oct 15 16:43:24 2019 +1000 + + removed popup image + +commit 97d251fd4637ca6fd19bd48a0a1e32f6dd884091 +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Tue Oct 15 16:43:09 2019 +1000 + + Create the helper function block_reduce + + Create the helper function block_reduce and write the description of the function + +commit 0dc3898a8fe392ed9671dfafe42e4582102d34be +Author: Loris Rossi +Date: Tue Oct 15 16:39:01 2019 +1000 + + Add visualisation of input and adjusted images + +commit 6ce68c63fda8a30c88e3f946c72e5229c985f4c3 +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Tue Oct 15 16:30:18 2019 +1000 + + Update downscale_local_mean function body + + Improve the function downscale_local_mean, make it be able to accept input of type ndarray and tensor, change the output type to tensor, add comments to downscale_local_mean function + +commit 16c791c2b6ad0a2eb8213c0cb516b26bb9619dd7 +Author: askar +Date: Tue Oct 15 16:27:33 2019 +1000 + + minor fixes + +commit 4dc25945490d7227d83685a447d51f8453d860c7 +Author: Loris Rossi +Date: Tue Oct 15 16:25:06 2019 +1000 + + First skeleton of main and adjust_gamma scripts + +commit 571475231f448e1464ea07930da493ce632dc43e +Author: askar +Date: Tue Oct 15 16:25:00 2019 +1000 + + inline comment in rank_order.py + +commit 319c5714373e0e99718afad30b63f8d9d822302a +Author: Loris Rossi +Date: Tue Oct 15 16:23:42 2019 +1000 + + Add gitignore + +commit 5b33843d94dcb6b06f7edd58af765cc5890cd5b9 +Author: Loris Rossi +Date: Tue Oct 15 16:17:27 2019 +1000 + + Create folder for adjust_gamma function + +commit 71bb9ce588d6b0b6e3895dea39b678055f0cefa2 +Author: askar +Date: Tue Oct 15 16:16:59 2019 +1000 + + added examples and formatted README file + +commit a5abc0254c91399ff4b61c90efd27ee4be7757c1 +Author: askar +Date: Tue Oct 15 16:16:45 2019 +1000 + + added examples and formatted README file + +commit 36f257151e0f7838f797d389c1f708e389d3b86d +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Tue Oct 15 15:41:34 2019 +1000 + + Add expalations of parameters + +commit 20c362614187aed0680418f8b3e2c8b9954d949b +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Tue Oct 15 15:32:46 2019 +1000 + + Add sentence in the second paragraph + +commit 96ec96f1f1e9017f1840848946c0ed6424461e22 +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Tue Oct 15 15:27:58 2019 +1000 + + Update README.md + +commit 2a911da6275cef24b14fc8c4ba6a915e1ccd2a54 +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Tue Oct 15 15:18:57 2019 +1000 + + Add the first paragraph of the introduction of algorithm + +commit 1925645ad9653349103f990f40940599945bafeb +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Tue Oct 15 15:08:08 2019 +1000 + + Add title + +commit 89e93c58354e96687d0f957054b575b3d341c65c +Author: askar +Date: Tue Oct 15 15:02:58 2019 +1000 + + more messages to main.py + +commit 8325b071a0402ffb448511fb7cae1c9e6c55ce4a +Author: askar +Date: Tue Oct 15 15:00:50 2019 +1000 + + added warning message to main.py + +commit 9db08e693b7c632420b0d94ed1c91d7be4d5b325 +Author: QijiangYao <56332113+QijiangYao@users.noreply.github.com> +Date: Tue Oct 15 15:00:12 2019 +1000 + + Add the name of algorithm as title + +commit 88efd5c723312ef7afb40c78888dc5f310ca29f0 +Author: askar +Date: Tue Oct 15 15:00:01 2019 +1000 + + added warning message to main.py + +commit aa16e31dcd9d1a6cdaa05476c22d1ede81c29ac5 +Author: askar +Date: Tue Oct 15 14:58:30 2019 +1000 + + restricted the module to work with jpeg files only + +commit 107658257db8f0bf81983e72fa36560851c6efed +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Tue Oct 15 14:45:29 2019 +1000 + + Update:" rewrite the README.md" + +commit d53ad4aa1396e43cc7dccdcab62b8cc73bbeca20 +Author: askar +Date: Tue Oct 15 14:35:19 2019 +1000 + + started README.md + +commit 39037ac9794a6446a88eaf043f0cbbe825960e67 +Author: askar +Date: Tue Oct 15 14:21:48 2019 +1000 + + fixed importing in main.py + +commit 9a42b4c4872768e79a8331d3cfa2694ec241ad60 +Author: askar +Date: Tue Oct 15 14:06:28 2019 +1000 + + added main.py + +commit 58ee9a9be97b46d48e7495e2e26dbd0567f54764 +Author: yufeng97 <47183963+yufeng97@users.noreply.github.com> +Date: Tue Oct 15 13:55:52 2019 +1000 + + submit version + +commit c4ff3f54b5070944ea58ac57cd7d16e3b6545bf3 +Author: yufeng97 <47183963+yufeng97@users.noreply.github.com> +Date: Tue Oct 15 13:55:31 2019 +1000 + + submit version + +commit b62900f1b8047d5f56d0666e613063a9fc8da12a +Author: askar +Date: Tue Oct 15 13:49:39 2019 +1000 + + added rank_order.py file + +commit fab2bd6cda627b682a5e465c587e0a35bd3069c7 +Author: Unknown +Date: Tue Oct 15 05:22:13 2019 +0200 + + Functional implementation of GCD + +commit d4b29c9d709d53459c3c435e060834ecadbdeaae +Author: dsuncn <49934337+dsuncn@users.noreply.github.com> +Date: Tue Oct 15 13:17:20 2019 +1000 + + Create downscale_local_mean.py + + Create the downscale_local_mean functon and import tensorflow. + +commit c1c2d2ac722ed1fedba271efdb1dcbce2f42ca34 +Author: yufeng97 <47183963+yufeng97@users.noreply.github.com> +Date: Tue Oct 15 12:58:05 2019 +1000 + + Update reference in code and add title in README.md + +commit cf637b85b09fdf18d968de608324927d13f6f9a0 +Author: yufeng97 <47183963+yufeng97@users.noreply.github.com> +Date: Tue Oct 15 12:46:30 2019 +1000 + + implement the README.md file + +commit 72ea4e7b4a53a794c353fde37e1aece104ee7809 +Author: Unknown +Date: Tue Oct 15 04:37:16 2019 +0200 + + Added first version of GCD module + +commit 3cf9f13d3715854d899dc6f31f3ffea4694374a3 +Author: yufeng97 <47183963+yufeng97@users.noreply.github.com> +Date: Tue Oct 15 11:31:52 2019 +1000 + + add gitignore and update some README.md + +commit 8a92d407bce612b2a83d64cedd7cefe9fc6e2b22 +Author: chrisbin07 +Date: Tue Oct 15 11:11:00 2019 +1000 + + #9 - Moved module directory from metrics to image, modified test_driver.py and edited README.md, added student information to test_driver.py and main module(Histogram.py) + +commit 29b779d1fda77d3a7feea902c52e2e974bfbf4a7 +Author: Peter Baldry +Date: Tue Oct 15 10:43:41 2019 +1000 + + generated readme.pdf + changes to readme + +commit f784866646d08ff979c5d8b21d13629911281050 +Author: Naziah +Date: Tue Oct 15 10:18:35 2019 +1000 + + begin tf implementation + +commit 934ad2d97af5cde3ba568e749bbb50f912063a8c +Author: chrisbin07 +Date: Tue Oct 15 10:14:36 2019 +1000 + + #8 - renamed(README.md) and modified readme.md + +commit e56518b566bcc185604424f002bda4f31ad0df3b +Author: yufeng97 <47183963+yufeng97@users.noreply.github.com> +Date: Tue Oct 15 08:29:09 2019 +1000 + + fix bug in scale factor + +commit 94081dfdc91e0f149052ec1391e7fb7b5ef19d67 +Author: Taotao Pan +Date: Tue Oct 15 08:16:23 2019 +1000 + + UPDATE: add import libs + +commit 018cbb660d51f873612442ebb32529a700d6e8c6 +Author: Taotao Pan +Date: Tue Oct 15 08:16:06 2019 +1000 + + UPDATE: plot all demos seperately + +commit c37249ebf2973b3565f2da1f5c0dcb066efb7c82 +Author: ROY +Date: Tue Oct 15 01:11:37 2019 +1000 + + Added resources folder + +commit 3e326568bb79120ac01a7c116120172239ed6153 +Author: ROY +Date: Tue Oct 15 01:06:00 2019 +1000 + + Moved sigmiod_correction package into image folder + +commit 5a41d50c095b5671e3892083924fd066bcb79c93 +Author: ROY +Date: Tue Oct 15 00:37:59 2019 +1000 + + Updated the commenting on the equation + +commit b1a35db55f96f54b2e7326aecabf77d566855af5 +Author: ROY +Date: Tue Oct 15 00:29:25 2019 +1000 + + Added the transformed image + +commit 552f7b540af27081a2a479f75c1e51b7f171c786 +Author: ROY +Date: Tue Oct 15 00:26:51 2019 +1000 + + Changed test script for displaying real image + +commit b65ac8f67f9b797c8f8aa78cb61e8d8b4ab78691 +Author: yufeng97 <47183963+yufeng97@users.noreply.github.com> +Date: Tue Oct 15 00:24:43 2019 +1000 + + change tensorflow version to 2.0 + +commit 77b4e0d6ea03c45d688731a2eb75b34dae634fe2 +Author: ROY +Date: Tue Oct 15 00:18:32 2019 +1000 + + Added the test script to verify the output + +commit 5bfa2d1a722d858d831edced559e412217c84170 +Author: ROY +Date: Tue Oct 15 00:14:31 2019 +1000 + + Fixed some data type bugs, and added min-max normalization + +commit 03cf1afa7d6ce0e25c30a3d41427a85543ed06cf +Author: ROY +Date: Mon Oct 14 23:48:52 2019 +1000 + + Create the sigmoid correction folder and add my algorithm + +commit b00bc400c2ed17cd92d5405cbdaae37fdcde2a2c +Author: chrisbin07 +Date: Mon Oct 14 23:38:49 2019 +1000 + + #7 - Removed __pycache__ + +commit fe0b23d502541cf97a62654b766219c41a021748 +Author: chrisbin07 +Date: Mon Oct 14 23:33:11 2019 +1000 + + #6 - Added first draft of readme markdown and images folder with markdown resources + +commit 59eb7453b8488ca8f2da556cdb9d02a805bf56dc +Author: “xuannan +Date: Mon Oct 14 23:11:45 2019 +1000 + + done: euler_phi function, doing: carmichael_lambda function + +commit 9c8f58481517226afa2c5ff0e3b64a43e718fedd +Author: chrisbin07 +Date: Mon Oct 14 22:02:58 2019 +1000 + + #5 - renamed module directory to Histogram, added test_driver.py script and __init__.py file to module directory + +commit 8035938b8be05ca7a7e6ef8aadda47ff5d79e7b9 +Author: rexsw +Date: Mon Oct 14 21:47:32 2019 +1000 + + added theory to the readme + +commit 3fcc83a670c40f460b56377c47c40ef8d88ed36a +Author: chrisbin07 +Date: Mon Oct 14 20:50:29 2019 +1000 + + #4 - added docstrings and comments for all functions, modified tf_histogram code to handle float values, renamed tf_histogram to histogram + +commit 455e8f2268db80d9f641d752bc2ce142f810ecc7 +Author: rexsw +Date: Mon Oct 14 20:10:01 2019 +1000 + + fixed large bug in equaliztion that was stopping it from working right + +commit 66ac162f9d9b0ca7202cd3bd3a3fe2e4f4c8dd22 +Author: rexsw +Date: Mon Oct 14 19:19:16 2019 +1000 + + fixed another bug in equalize by image with a try catch + +commit a34ca895508f0e0b9d57aac64ba406ea05c85f78 +Author: rexsw +Date: Mon Oct 14 19:13:51 2019 +1000 + + fixed spelling error in script names + +commit d33970ecb48b6c5d92b26c84d9dd43179245e1fc +Author: rexsw +Date: Mon Oct 14 17:55:40 2019 +1000 + + fixed spelling errors in README and added main funcation to driver + script + +commit 222b209103dcfe937417af3575f63d813fc8070f +Author: Qijiang Yao +Date: Mon Oct 14 16:07:37 2019 +1000 + + Call the function 'histogram' in main.py, and visualize the graph + +commit e987a00c22658e449d35993889874f4498f84c17 +Author: Qijiang Yao +Date: Mon Oct 14 16:01:36 2019 +1000 + + Remove 'Nnmpy' function from the file + +commit b5088682ee59f00b1056e5454e60f6305799ad27 +Author: Qijiang Yao +Date: Mon Oct 14 15:51:39 2019 +1000 + + Get the parameters hist(number of pixes) and hist_centers(intervals) of the output histogram by TF + +commit b69b7e45f53fb31a621897bdf0ccdc6c2ef86dd5 +Author: Alexander Emmanuel K.J Lim +Date: Mon Oct 14 15:37:08 2019 +1000 + + added inverse_mod function + +commit 334b07ba11286f41928250e50b5ced99046f76f2 +Author: Alexander Emmanuel K.J Lim +Date: Mon Oct 14 15:31:42 2019 +1000 + + change a little bit the strucutre of xgcd function + +commit f34917d5ff5c52bd209993e184bc6bece752f6d9 +Author: Qijiang Yao +Date: Mon Oct 14 15:18:55 2019 +1000 + + Set some variables of tensorflow function histogram_fixed_width + +commit ce6ea8f0bc59191ac35e95f14b315c7a2ba66403 +Author: Qijiang Yao +Date: Mon Oct 14 15:10:42 2019 +1000 + + Convert the matrix of image into a column vector by tensorflow function 'reshape' + +commit 1fa4a8dc8d66879be863d3849315f54b982b87f6 +Author: Qijiang Yao +Date: Mon Oct 14 14:33:42 2019 +1000 + + Import tensorflow function, and chage image type from numpy.array to tensor + +commit b8a1a90a8f1320510769720edcb439db7d615dc0 +Author: Qijiang Yao +Date: Mon Oct 14 14:27:21 2019 +1000 + + This is my main file + +commit 71d226abf632dcd165d83db8854b17217fddc7b9 +Author: Qijiang Yao +Date: Mon Oct 14 14:24:10 2019 +1000 + + This is my original function of histogram without tensorflow + +commit 6830bb3d5d7ef67d36b2975abaa1b3311849d9f7 +Author: Qijiang Yao +Date: Mon Oct 14 13:12:32 2019 +1000 + + Add code file + +commit c836cf3dbdd0f91561426881e9d9b73b6a151f39 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Mon Oct 14 12:55:33 2019 +1000 + + Update :" README.md and main.py" + +commit af96908c8862f656d6a2440fae524e6373fb51dc +Author: Darcy Russell +Date: Mon Oct 14 12:34:36 2019 +1000 + + Removed cache folder + +commit a99a1c8fa1c4d9b88559a6dda792354f0e587443 +Author: Darcy Russell +Date: Mon Oct 14 12:26:36 2019 +1000 + + Adjusted readme heading + +commit 75f7ba4e2f6dae8eac1b325da23bbe5aecff20b7 +Author: satrfall6 +Date: Mon Oct 14 12:24:29 2019 +1000 + + fixed the indent bug, now it works normally + +commit abdcc006685fd6a811962783aa8df87d54deba89 +Author: Darcy Russell +Date: Mon Oct 14 12:20:40 2019 +1000 + + First draft of readme complete + +commit 79ff7d650ba82436122c046ca0bcdae24554a5d2 +Author: Darcy Russell +Date: Mon Oct 14 12:10:28 2019 +1000 + + Changed testdriver visualisation, added another image and extended readme + +commit a76049dcf7d8a30b876f57fe63c93f9301268ddd +Author: satrfall6 +Date: Mon Oct 14 12:04:27 2019 +1000 + + finished denoise_tv_chambolle_torch function + +commit 8c00e1c4ca0a8690efae03131ebe38745f8861ee +Author: Unknown +Date: Mon Oct 14 11:40:17 2019 +1000 + + Minor changes + + Added sess.close() to histogram function + +commit 028a5c68336bd666a32262f7ec14caf71a580d31 +Author: Umberto Pietroni <32171743+umbertopietroni@users.noreply.github.com> +Date: Mon Oct 14 11:16:05 2019 +1000 + + Added usage example to README.md + +commit 912103583acb41d6d53cde2efeee4df271a020d4 +Author: Darcy Russell +Date: Mon Oct 14 11:02:02 2019 +1000 + + Added examples into readme and removed a file I accidentally added + +commit 5eb6bd07f97c20cb05be66f3b45dc22350eb969d +Author: Darcy Russell +Date: Mon Oct 14 10:48:19 2019 +1000 + + Continued writing readme + +commit b69454356368f2ca9817fb2ba92f1c3f9a86e36e +Author: rexsw +Date: Mon Oct 14 00:13:10 2019 +1000 + + added README.md to outline project + +commit 0795b8ffe26f30d8151bb74a50e85fc9a3df6de5 +Author: rexsw +Date: Mon Oct 14 00:04:22 2019 +1000 + + created driver file for example usage + +commit 5d190bb525d0070068f2508102620033a58cb77e +Author: rexsw +Date: Mon Oct 14 00:02:45 2019 +1000 + + fixed a bug with the equalizing hist by image + +commit 47f0f80b86dc7796d244b0afbd0202c47636f591 +Author: satrfall6 +Date: Sun Oct 13 23:10:25 2019 +1000 + + finished the _denoise_tv_chambolle_nd_torch function + +commit e629c8696963f73b30974ef45a6f9b7d9390a33d +Author: chrisbin07 +Date: Sun Oct 13 23:06:38 2019 +1000 + + #3 - Added code in module for _tf_is_int_subtype and tf_histogram, additionally, modified code of all fucntions to avoid using multiple tensorflow sessions + +commit b778f2f16876e6e349b29d42f2d763e945330dc3 +Author: satrfall6 +Date: Sun Oct 13 22:28:33 2019 +1000 + + create diff function for torch tensor + +commit b02ab793e21609de8356dea931e2a3e3f7b2a9c5 +Author: rexsw +Date: Sun Oct 13 22:21:33 2019 +1000 + + comments + import clean up + +commit bec2c81baa709a4df61b271962ee06a1a50edbff +Author: Darcy Russell +Date: Sun Oct 13 22:07:48 2019 +1000 + + Cleaned up equalize_hist() method, added support for boolean masks and extended the testdriver + +commit bdc4df6dd2c46f24824fda2b6e9c5d76398b26f1 +Author: rexsw +Date: Sun Oct 13 21:52:26 2019 +1000 + + plotter helper funcations + +commit 1befbf63ce44e5a81d0fdac2f4461db500771023 +Author: “xuannan +Date: Sun Oct 13 21:12:40 2019 +1000 + + added the factor function and prime_divisors function. doing the euler_phi function + +commit f01275e565e53265b18ea058898b67113e83ddde +Author: satrfall6 +Date: Sun Oct 13 21:09:52 2019 +1000 + + edited side function _denoise_tv_chambolle_nd_torch + +commit fd4682ca3d49ca6844ab6614f7787de14dca5cd2 +Author: Unknown +Date: Sun Oct 13 21:09:41 2019 +1000 + + Update README.md and minor changes + +commit d333847b3f80806d13041392ed9513db9ea2c01e +Author: rexsw +Date: Sun Oct 13 20:43:17 2019 +1000 + + shapely values won't work, swtiching to histogram mertics + +commit 94842290bdf2c9f95bbe566a43ccdda24b4fb2f8 +Author: Darcy Russell +Date: Sun Oct 13 20:39:43 2019 +1000 + + Algorithm is now correctly adjusting colour images aswell + +commit 71fd88750b71abce092225b762c86f28f19ce369 +Author: “xuannan +Date: Sun Oct 13 20:34:56 2019 +1000 + + today done: fixed the factors function + +commit 98d74c257afb30ca8c068ed7e450f609fc2921c3 +Author: satrfall6 +Date: Sun Oct 13 20:30:51 2019 +1000 + + First commit + + added denoise_tv_chambolle_nd function in torch version + +commit 85df3837262dc0c2f5f231a99f600846d96ef1eb +Author: Darcy Russell +Date: Sun Oct 13 19:35:24 2019 +1000 + + Implemented algorithm for grayscale and extended readme + +commit d8612089ed5ccb0556ecc9f0285cae3900873d5d +Author: Umberto Pietroni <32171743+umbertopietroni@users.noreply.github.com> +Date: Sun Oct 13 18:12:46 2019 +1000 + + Create README.md + +commit 6a1b7cd0e49fb88353fb45a2ad4a584571a243fa +Author: Darcy Russell +Date: Sun Oct 13 17:50:31 2019 +1000 + + Began implementing algorithm + +commit 47cd71f8927dcce8fab9d8fd9edc58dff7e52d09 +Author: Darcy Russell +Date: Sun Oct 13 17:33:23 2019 +1000 + + Added some references into my tf function to help myself out + +commit f54d448dd0e51fab7a9269946fa32fc5c07f5956 +Author: Unknown +Date: Sun Oct 13 17:32:53 2019 +1000 + + Completed porting to Tensorflow + +commit 79fd565624b279e70858a2f1bbef4dedd6529a14 +Author: Darcy Russell +Date: Sun Oct 13 17:20:27 2019 +1000 + + Added blank files for local equalisation algorithm and readme + +commit e7dda51a267bc61596407caa1ee75deb1da3dccf +Author: Darcy Russell +Date: Sun Oct 13 17:19:02 2019 +1000 + + Rewrote testdriver script. Added grayscale and colour examples + +commit 1e8bafe86f04fa8b4bc06c892e655fcf054e933b +Author: Darcy Russell +Date: Sun Oct 13 17:12:22 2019 +1000 + + added gitignore and removed pycharms hidden config directory + +commit 5c8905cf21dbba0daa80a4913db086d419af8f0d +Author: Darcy Russell +Date: Sun Oct 13 17:09:46 2019 +1000 + + Added initial testdriver script w/ the scikit image equalize_hist() example so I can understand how it works + +commit 198fd18b6d7c2ef4afb0c0d545175606688faaeb +Author: Taotao Pan +Date: Sun Oct 13 16:40:16 2019 +1000 + + UPDATE: remove rescale_intensity function + +commit c13de8204b45c4150bc5135402fbffd092f0e562 +Author: Taotao Pan +Date: Sun Oct 13 16:39:51 2019 +1000 + + UPDATE: different algorithms demos and descriptions. + +commit 46f33e31b742911546852f0bba63f444e0dabd8e +Author: Taotao Pan +Date: Sun Oct 13 16:39:22 2019 +1000 + + UPDATE: refectorize code + +commit 9aefdab252407ddc7535e27c1b5e1ec2ca565030 +Author: Taotao Pan +Date: Sun Oct 13 16:39:06 2019 +1000 + + UPDATE: several demos for algorithms + +commit 635cb58e3dcb8340e553d4d6de8369bccdd8da76 +Author: Taotao Pan +Date: Sun Oct 13 16:38:32 2019 +1000 + + UPDATE: remove intensity_range function + +commit 4711e81c17ae6d4a3e3e4398bf2ff7999bd15470 +Author: Taotao Pan +Date: Sun Oct 13 13:45:21 2019 +1000 + + UPDATE: setup functions can be exported + +commit c7ef2a37db2c72810b62c81cd82cf042cb17ab46 +Author: Taotao Pan +Date: Sun Oct 13 13:34:43 2019 +1000 + + UPDATE: add more comments regarding interp function + +commit 2fa1032bc61417b1506e04c1a8121baec37a6c7e +Author: Taotao Pan +Date: Sun Oct 13 13:33:59 2019 +1000 + + UPDATE: refactorize the structure of this file + +commit 0f0b3692ab5c5b887ffabdfd4d2465dee68e144e +Author: Taotao Pan +Date: Sun Oct 13 13:32:45 2019 +1000 + + UPDATE: the test cases for gamma correction + +commit 8a05fa7c569874dfccecb60537ddf42bf65c0c13 +Author: Solomon +Date: Sun Oct 13 13:28:22 2019 +1000 + + Added more comments. + +commit 959ac765715a8a3fc593bd06ce4709465588db52 +Author: SoloKwansy <49980796+SoloKwansy@users.noreply.github.com> +Date: Sun Oct 13 13:21:35 2019 +1000 + + Added an image + +commit d99fd3600748d5249718911de8ad7c0340ec18cf +Merge: c200063e 8f566b9d +Author: Solomon +Date: Sun Oct 13 13:16:44 2019 +1000 + + Merge branch 'topic-algorithms' of https://github.com/SoloKwansy/PatternFlow into topic-algorithms + Get changes to readme. + +commit 8f566b9d6b27c77a4449aaf760afca43e355b321 +Author: SoloKwansy <49980796+SoloKwansy@users.noreply.github.com> +Date: Sun Oct 13 13:16:33 2019 +1000 + + Updated readme + +commit c200063e6776c3195131fbdcbd838d4cc9746d9b +Author: Solomon +Date: Sun Oct 13 13:07:28 2019 +1000 + + Image of the gauss integers. + +commit cafa552cdeb0421280b8abf2f2806671d4fbad4a +Author: SoloKwansy <49980796+SoloKwansy@users.noreply.github.com> +Date: Sun Oct 13 12:34:54 2019 +1000 + + Testing/practicing github markdown + +commit 89274a1edd134813cdd6708a6b87c81bb270ceba +Author: Solomon +Date: Sun Oct 13 12:21:03 2019 +1000 + + Created the readme file. + +commit cbe2f9b9ba9a5f8379362fa1408a9756b9aaa68b +Author: Solomon +Date: Sun Oct 13 12:17:57 2019 +1000 + + Made a test script and tweaked the pow method. + +commit c1ca29c3aa85c61050afd7347e5aa45d993fcfb7 +Author: 1tanwang +Date: Sun Oct 13 12:08:36 2019 +1000 + + complete atleast_3d function + +commit 282ce3b14495591cd31f70bdcd2acac90e87c600 +Author: 1tanwang +Date: Sun Oct 13 11:51:58 2019 +1000 + + define needed functions + +commit 360ff0eba7df1ec182c061457ac6f5141629bc76 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sun Oct 13 11:25:33 2019 +1000 + + Update: "README.md and some other things" + +commit 6dfc4c32aaea201ce15e855947b46be38b26b1fd +Author: Solomon +Date: Sun Oct 13 10:52:14 2019 +1000 + + Added further documentation and acknowledgements/references to the repo from which the module was ported. + +commit b1c4d13416a2c1c26478cd37b3bf806f2bdaf9b2 +Author: Solomon +Date: Sun Oct 13 10:25:31 2019 +1000 + + Added factor methods and added docstrings and comments + + The factor methods are basically identical to the source as the original author was not entirely sure about the maths and I myself have no clue as to how one would factorise Gaussian integers. I simply added them for completeness + +commit 8eb1584b8b2a12a25f8102df509bf5d7fa86dd44 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sun Oct 13 10:10:51 2019 +1000 + + Update: "finsih the histogram_matching.py; rename the "test" to "main". + +commit be7d891b2b490d38a4384d0338fd482651e5f3b7 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sun Oct 13 09:56:42 2019 +1000 + + Update: "the comment of function match_histograms" + +commit 0fd059ecce1b464dc9a1610be6a34e8a5f7df293 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sun Oct 13 09:32:49 2019 +1000 + + Update: " the comment of function _interpolate" + +commit d297924fe917b7da51643a3536ffdb4e996ef1bd +Author: 1tanwang +Date: Sun Oct 13 00:18:46 2019 +1000 + + initial commit for denoise_tv_bregman + +commit 21cc140f113c2506056d995040ae8d86c3224c44 +Author: Naziah +Date: Sat Oct 12 23:17:30 2019 +1000 + + ignore ipynb checkpoints + +commit eda92822e218fca52f9f4854cdb68ad55fe65bae +Author: Naziah +Date: Sat Oct 12 23:16:11 2019 +1000 + + attempting smoothing in numpy first + +commit 08ca9851d11287735e19adbce4dc567a8b077245 +Author: LeoYez <31028391+LeoYez@users.noreply.github.com> +Date: Sat Oct 12 23:08:20 2019 +1000 + + Update the readme file. + + Adding the pictures to demonstrate how it works. + +commit bc6b5f2e9df34ca91ecad38d3333b8aae0a7555c +Author: LeoYez <31028391+LeoYez@users.noreply.github.com> +Date: Sat Oct 12 23:00:41 2019 +1000 + + Upload original image and histogram + +commit da78eb31f20aa03c5e75ec45008daaa40b165962 +Author: LeoYez <31028391+LeoYez@users.noreply.github.com> +Date: Sat Oct 12 22:54:49 2019 +1000 + + Update readme.md file (not all) + + I will upload the images file to this repo for showing images in readme.md. + +commit 0742cc67b63fce95d3923d46e8d6939dbe927168 +Author: Naziah +Date: Sat Oct 12 22:39:03 2019 +1000 + + added readme + +commit 02e1e0cb687f143ffb01733ba61a1411fb7f8434 +Author: Junjie Ye +Date: Sat Oct 12 22:38:00 2019 +1000 + + Finish commenting the driven file and everything is good to go. + +commit 53b6e5d6d5aeab9b12c82fec8a5660249f4d3fab +Merge: eda1f6b6 5dd102d0 +Author: naziah28 +Date: Sat Oct 12 22:37:56 2019 +1000 + + Merge pull request #2 from shakes76/topic-algorithms + + Topic algorithms + +commit b302d380a429379e55e7e7e7807433cc00bc1eb7 +Author: Junjie Ye +Date: Sat Oct 12 22:33:42 2019 +1000 + + Finish modifing the driven file and testing. + +commit eda1f6b6dc52048abfe44f474ae5dfb1cccc0ca4 +Merge: 6a023520 98fcf2c7 +Author: naziah28 +Date: Sat Oct 12 22:31:28 2019 +1000 + + Merge pull request #1 from shakes76/master + + update base with forked repo + +commit a940228345c176460d0fcfc7abddfe11cd2c9060 +Author: Junjie Ye +Date: Sat Oct 12 22:23:28 2019 +1000 + + Add a driven file to run an example using the function in histogram.py. + +commit d97c0096e065523284bb15c0e360d5350b7d9fda +Author: Junjie Ye +Date: Sat Oct 12 22:20:17 2019 +1000 + + Finish converting the whole function file and commenting. + +commit 64f7a12af87f09eebb9f02220ede3c39325f7795 +Author: Lynn +Date: Sat Oct 12 22:12:59 2019 +1000 + + sorry also some typesetting errors + +commit 22fae00706d7d2d7a8e5976091c9629365a1497f +Author: Lynn +Date: Sat Oct 12 22:08:52 2019 +1000 + + also some typesetting errors in README.md + +commit 2d082b90f8a9d6d7d1fdca878443ed857daee316 +Author: Lynn +Date: Sat Oct 12 22:04:12 2019 +1000 + + modify some typesetting error + +commit ee6abc52b6197e361de2e1715135b8e448405d6e +Author: Solomon +Date: Sat Oct 12 22:02:22 2019 +1000 + + Added the isprime method. + +commit c853589209bfef4e116406c6f053053cb352068a +Author: Junjie Ye +Date: Sat Oct 12 21:58:47 2019 +1000 + + Finish converting second sub function to tensorflow and documenting + +commit 3aa6b7f651ebbd4ebbf6ec5791155236b3b9396d +Author: Junjie Ye +Date: Sat Oct 12 21:56:39 2019 +1000 + + Finish convertingn first sub function for the whole function + +commit 7a5659d57712aa4528c15c46cdb3395a5eb94dae +Author: Lynn +Date: Sat Oct 12 21:56:25 2019 +1000 + + Adjust the image size and README.md file mark + +commit d3db69111c3ae670c01169e2da3220d70a8f5a37 +Author: Lynn +Date: Sat Oct 12 21:46:00 2019 +1000 + + fix some marked down thing + +commit 181a74bf4f991d25e645897a5ad5a0432168587f +Author: Lynn +Date: Sat Oct 12 21:33:59 2019 +1000 + + The first vision pf README.md file + +commit 13ae05ad0f858875354aa58c3f0c8d187aa9134d +Author: Solomon +Date: Sat Oct 12 21:29:25 2019 +1000 + + Overided the __pow__ method. + +commit 0bbba1f049527a55de3f907b828f149f65c5d02b +Author: Peter Baldry +Date: Sat Oct 12 21:16:15 2019 +1000 + + remove .pyc file + +commit dc56775749a1fed2ededda5ef52d2c40eb09b0a9 +Author: Peter Baldry +Date: Sat Oct 12 21:13:48 2019 +1000 + + usage of main driver script + +commit ea192bec0df3c902d913faff8507d4bb79996baa +Author: Lynn +Date: Sat Oct 12 21:05:55 2019 +1000 + + The more clear test image and result. + +commit ea1b8370fde4f4c036f9a7a537b640daece2decb +Author: Solomon +Date: Sat Oct 12 20:39:30 2019 +1000 + + Added the gcd and xgcd methods. + +commit 5f85d60ecf8a36858ff3a2a7250c7a31f70929fc +Author: “xuannan +Date: Sat Oct 12 20:18:30 2019 +1000 + + today done: added separated lines to each function; fixed isprimeE bug; done the is_prime function; done factorone function; done factors function; done factorPR function. doing: is_prime (no idea why it is keep looping, has bug), factor function. That is all today! + +commit bafc7ac031378f80d58471fdfd99f982e63a812e +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sat Oct 12 20:05:11 2019 +1000 + + Update: "the comment of unique_inverse" + +commit a38dbb8cec6b81349e6acdd0b84ab28301698b47 +Author: Peter Baldry +Date: Sat Oct 12 19:04:53 2019 +1000 + + bug fix in readme + +commit 601fd258c1ff89f31f4f667422dc07a0e63f55a6 +Author: Peter Baldry +Date: Sat Oct 12 19:02:57 2019 +1000 + + example usage added + +commit 8279397994e70556b6044ff141e737c198399153 +Author: Lynn +Date: Sat Oct 12 18:58:52 2019 +1000 + + The result of Algorithm. + +commit 1b12c87e23a953a48c58519aed38571c6030f1ab +Author: Peter Baldry +Date: Sat Oct 12 18:46:26 2019 +1000 + + fix bug in saving fig + +commit 98b8f12f4533c04df8e4905778892e0682923315 +Author: Peter Baldry +Date: Sat Oct 12 18:43:07 2019 +1000 + + example output in readme + +commit c3fba87591808b3bb83aaf9035271c2e7a2b0e29 +Author: Mr Scott Whittington +Date: Sat Oct 12 17:27:31 2019 +1000 + + updated to tensorflow + +commit fb47871bbf4c5e19682610371d554748d2d18179 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sat Oct 12 16:53:03 2019 +1000 + + Update: "Test correct! finished the task" + +commit dff45446e8c1f65d0e4e79f3832b24907e07353a +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sat Oct 12 16:39:10 2019 +1000 + + Update: " write a new function -unique_iverse to get the same result(index) like np.unique" + +commit 6ecd8459688bc38a1118a2cffd03ad3aa245524f +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sat Oct 12 15:51:05 2019 +1000 + + Update: " when testing find that return of tf.unique_with_counts is different from np.unique" + +commit cd00bb74784d8a2d9abd78c055bad250de0f3c05 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sat Oct 12 15:22:54 2019 +1000 + + Update" test.py" + +commit 0b5de0080904f98a78386439960148a7ff063a05 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sat Oct 12 15:13:08 2019 +1000 + + Update: " renamed the py file (histogram_matching) + +commit a2b6f2eef87e211dbf47389d0cdfada0110c077d +Author: Mr Scott Whittington +Date: Sat Oct 12 15:07:14 2019 +1000 + + init commit + +commit dd0519481159b5dac9bb06aceb85cfcea820a06c +Author: Solomon +Date: Sat Oct 12 15:02:20 2019 +1000 + + Added the divmod method. + +commit 59cd925787567539b2a27421e3a31a145f289615 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sat Oct 12 14:57:20 2019 +1000 + + Create: " test.py to test my code i have finished" + +commit f5e5abe240b39dfdd9d6c15e33940964fa9a69d6 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sat Oct 12 14:52:28 2019 +1000 + + Update: "match_histograms function" + +commit 8d3824d31f00e068149f1b1cb61d98b17f21bad8 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sat Oct 12 14:18:14 2019 +1000 + + Update " finsh_match_cumulative_cdf version 2" + +commit 73a3e9a0483c6aa363e9c493afc9ca0ccaf06a20 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sat Oct 12 14:13:28 2019 +1000 + + Update: "Finish the function "_match_cumulative_cdf" + +commit 539ac373a49a90b7003a36f9a72281f874eb6f63 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sat Oct 12 13:56:32 2019 +1000 + + Update: " _interpolate function" + +commit 4b4879f71c2a3ad4a59fa8ffb1722e843f22ef0a +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sat Oct 12 13:28:28 2019 +1000 + + Update "_match_cumulative_cdf function, but found need to write a function like np.interp" + +commit ab29571359a3f1349153d6efe8c14f23a070a8c1 +Author: Tristansss <43728738+Tristansss@users.noreply.github.com> +Date: Sat Oct 12 13:23:59 2019 +1000 + + Create: "historgram_matching.py" + +commit 7ed67674ef55b620964a9b041b611d07d3deed7a +Author: Solomon +Date: Sat Oct 12 13:04:51 2019 +1000 + + Forgot to save before add and commit + +commit 33a25b0606d22148e915d07d0745af7bc93e3c57 +Author: Solomon +Date: Sat Oct 12 13:04:22 2019 +1000 + + Added and overloaded the __floordiv__ and __ifloordiv__ methods. + +commit 97a520a881ed8563cafa9ac1587a328eae2cbac8 +Author: Solomon +Date: Sat Oct 12 12:45:46 2019 +1000 + + Added and overloaded the floordiv method. + +commit 649665b817a645c7246ed7d5a7e9bf3daa9c85bc +Author: chrisbin07 +Date: Sat Oct 12 12:35:14 2019 +1000 + + #2 - added code in module for _tf_bincount_histogram function + +commit 1fcc7c33b295a22ec4d3a2c20c974ea8ef49afe7 +Author: tm70 +Date: Sat Oct 12 12:01:39 2019 +1000 + + image cropped for better viewing + +commit 1fab2a23a592635444db06e8f50131d39e6b46ae +Author: tm70 +Date: Sat Oct 12 12:00:32 2019 +1000 + + README now shows a visual example of the transform + +commit be7a3a4756c63202d0947d11ac83d402c2e2b596 +Author: tm70 +Date: Sat Oct 12 11:57:35 2019 +1000 + + Example execution image added, test script runs on eager execution now for faster testing + +commit c5023e29d2d1cbd645dae5ad9707b95ba49b2d0f +Author: Solomon +Date: Sat Oct 12 11:37:53 2019 +1000 + + Added and overloaded the multiplication methods. + +commit 8bf029d8835a12a58850759b7fd527e664a6754d +Author: Solomon +Date: Sat Oct 12 10:09:00 2019 +1000 + + Changed add method to include ints. + +commit 94801733cc2131b0a17ced6f5b4418fdbc684124 +Author: Solomon +Date: Sat Oct 12 09:57:30 2019 +1000 + + Overloaded the remainding subtraction related methods. + +commit 12b2911ae5624a9d74d58f52c294dab9cae2e928 +Author: Solomon +Date: Sat Oct 12 09:51:06 2019 +1000 + + Changed the class variable names to re and im. Overloaded addition and subtraction methods. + +commit e31ad6dcf5e2040993af8239f8cb6b821a2e4275 +Author: Solomon +Date: Sat Oct 12 09:06:36 2019 +1000 + + Changed the __str__ method. Added an add method. + +commit 0c28ec2ad0d00fb22c89ed44066054fb66abc892 +Author: Jingwei WANG +Date: Sat Oct 12 07:47:20 2019 +1000 + + add sess.close() and clear warnings except "FutureWarning" + +commit f2c874fad171fe21a1a4877731acc3e556298952 +Author: Jingwei WANG +Date: Sat Oct 12 07:24:21 2019 +1000 + + restyled codes + +commit ae8326126be1277f21688aefcff8d6c042aa1aac +Author: Jingwei WANG +Date: Sat Oct 12 07:21:46 2019 +1000 + + simplify variable initializer + + group initializers of all variables, increased noise for testing + +commit a30891c78bb57a0bf3686928633b83f7af987193 +Author: Solomon +Date: Fri Oct 11 22:19:16 2019 +1000 + + Added the __ne__ method. Forgot to save last change. + +commit dadafb527d7b32e3245dc05f0ce39c7761b50bf9 +Author: Solomon +Date: Fri Oct 11 22:17:38 2019 +1000 + + Added the __ne__ method. + +commit 82f7312b5a16e9219c3d142275d5ddf03009cb33 +Author: Solomon +Date: Fri Oct 11 22:10:49 2019 +1000 + + Added the __eq__ method. + +commit 7a0a7e3b446b271b5d0413690817ff49d4ec4c90 +Author: Solomon +Date: Fri Oct 11 22:03:12 2019 +1000 + + Added the __repr__ method. + +commit 3f51ffaa0d37e6f1233dd323c29d6e70443315b3 +Author: Solomon +Date: Fri Oct 11 21:53:39 2019 +1000 + + Added the __str__ method. + +commit b3da03f9d83de57418280cc5ceab013fa43a2414 +Author: “xuannan +Date: Fri Oct 11 19:37:27 2019 +1000 + + done: xgcd functioon, power_mod function, inverse_mod function... doing: isPrimeE function (has bug), is_prime function, factor function + +commit 898fe3f087ee49277a1d8049ca9f60bd72b5b633 +Author: tm70 +Date: Fri Oct 11 18:47:04 2019 +1000 + + Initial draft of README complete, need to add image to illustrate the algorithm + +commit 721cb19ba1f0575cf8dc931e49d358349d5510e6 +Author: Unknown +Date: Fri Oct 11 18:38:22 2019 +1000 + + Port _offset_array, _bincount_histogram to tensorflow + +commit d5a6dac410af2f606aec88df07a04ad54cb317f1 +Author: Unknown +Date: Fri Oct 11 16:23:50 2019 +1000 + + Port dtype_limits to tensorflow + +commit a2f7c782dbc4259d1a1a9b9e9f91acb4ac858102 +Author: mubiquity +Date: Fri Oct 11 12:07:01 2019 +1000 + + Basic explanation in README + +commit ce65e62b88348b5942d1a29502126204aace81b2 +Author: Unknown +Date: Fri Oct 11 11:54:30 2019 +1000 + + Port histogram to tensorflow + + function histogram to tensorflow + +commit 8cbfcb3843167110ba20291291296367e7bca387 +Author: mubiquity +Date: Fri Oct 11 11:54:18 2019 +1000 + + Renamed lmd to smoothing_factor + +commit dd4e49607906037e4f7aaa88f09d6c4d71d1e9d0 +Author: mubiquity +Date: Fri Oct 11 11:54:04 2019 +1000 + + Example usage section of the README complete + +commit d3f1e0d0f090a08a2951f02e81a3608167f6db4a +Author: mubiquity +Date: Fri Oct 11 11:08:46 2019 +1000 + + Typing, comments and other cleanup + +commit e7baa1ace9bedac0c16ca3ecd930919f4d8e3bb3 +Author: mubiquity +Date: Fri Oct 11 10:27:48 2019 +1000 + + Main iteration and fft helper functions implemented + +commit 9fef1520a8702973bcc07043c85b947d25951631 +Author: mubiquity +Date: Fri Oct 11 09:02:24 2019 +1000 + + Optical transfer function implemented + +commit a0c9825f6f3efd25ebce59e8165efda1d4b37a4b +Author: mubiquity +Date: Fri Oct 11 06:38:33 2019 +1000 + + Basic input verification + +commit 2ff4c3ba9b1859ecbfb49fa6cc3c43e4bead320a +Author: mubiquity +Date: Fri Oct 11 06:28:34 2019 +1000 + + Initial files added + +commit bda9c1e3b4299255cf86cf60be76338f1d2c7475 +Author: “xuannan +Date: Thu Oct 10 23:28:38 2019 +1000 + + Create a folder and upload the numbthy.py + +commit 406744e2d02cf9a8325b5cbeca256fdc350b4c22 +Author: Alexander Emmanuel K.J Lim +Date: Thu Oct 10 22:55:58 2019 +1000 + + added xgcd function + +commit 586e3595f23aec1f6146a2d0bac430d83dc942fa +Author: Alexander Emmanuel K.J Lim +Date: Thu Oct 10 21:24:23 2019 +1000 + + first commit successfully implemented gcd function in tensorflow + +commit e8367651f183497d73f84f105d65a88338142aab +Author: coppers-j +Date: Thu Oct 10 19:51:15 2019 +1000 + + Initial commit setting up files and algo selection + +commit 815dd89735b25cfae5d3bc6e02f1131b900625e5 +Author: Peter Baldry +Date: Thu Oct 10 19:46:07 2019 +1000 + + added explanation of algorithm to readme + +commit 38c2007fd1fc0dbc0ecb59a00b1cfa9226fa0b63 +Author: Peter Baldry +Date: Thu Oct 10 19:35:39 2019 +1000 + + added documentation to readme + +commit 179691b22183c6da730ad45b3ab9ecaf91bb1e66 +Author: Unknown +Date: Thu Oct 10 16:22:44 2019 +1000 + + Initial commit + + histogram - exposure module + +commit e315bb6e93f325dbd0de7f2239ec7665d111a8ab +Author: yufeng97 <47183963+yufeng97@users.noreply.github.com> +Date: Thu Oct 10 15:59:58 2019 +1000 + + modify function docstring and add test scipt + +commit e978e46c17b2cc298d6b2df6d81d552b6fb213e1 +Author: tm70 +Date: Thu Oct 10 15:12:33 2019 +1000 + + Test script now calculates and prints the time to run each algorithm. + + README.md created, not complete yet + +commit 9fecbf026186a5e702bcdd52b4e7a2e5c2123306 +Author: yufeng97 <47183963+yufeng97@users.noreply.github.com> +Date: Thu Oct 10 14:37:12 2019 +1000 + + initial files + +commit 5b78c0410da645819dabe8a6a125325ab9db7485 +Author: Jingwei WANG +Date: Thu Oct 10 13:47:25 2019 +1000 + + Delete .DS_Store + +commit cba92384611fb99f93388c44e8bfc9bc92bce81a +Author: Jingwei WANG +Date: Thu Oct 10 13:46:10 2019 +1000 + + add references + +commit 5026c228e332266385504b93cf0135eef330284f +Author: Jingwei WANG +Date: Thu Oct 10 13:34:13 2019 +1000 + + rm commented code + +commit e557e1663bf5ed854b102f1a3b7ad2ffd824fdc4 +Author: Junjie Ye +Date: Thu Oct 10 13:21:47 2019 +1000 + + Fill the function file with histogram resource code + +commit e9a5f3f141c3fc8372cc6325ffdf761006f40ac8 +Author: Jingwei WANG +Date: Thu Oct 10 13:05:31 2019 +1000 + + rm unrelative files + +commit 46e3cf81be36c44cc9913b432847802d5e09abb9 +Author: Jingwei WANG +Date: Thu Oct 10 12:59:37 2019 +1000 + + Update README.md + +commit e497b5905762b337f1883e165892eb9c698d712a +Author: Jingwei WANG +Date: Thu Oct 10 12:57:28 2019 +1000 + + update readme.md + +commit 6e2d7fb617e9dba30a95696c48402933962d77e9 +Author: Peter Baldry +Date: Thu Oct 10 12:35:35 2019 +1000 + + introduced variable source range, no magic numbers, nice plot complete + some commenting complete + +commit 35a71b7b933ced5593d1c40bc3503f5f47732b6a +Author: chrisbin07 +Date: Thu Oct 10 12:19:16 2019 +1000 + + #1 - Added code in module for tf_dtype_limits and _tf_offset_array functions + +commit 28172e320266285b84bf10f6ca6bd0a43c3b1dda +Author: Jingwei WANG +Date: Thu Oct 10 02:05:26 2019 +1000 + + Update .gitignore + +commit 8254ba375eb7c3699b2bf3ef10c4025e9f58040e +Author: Jingwei WANG +Date: Thu Oct 10 02:01:37 2019 +1000 + + add commemts and formatted + +commit 3222bf5099194b760169eff8f7fa5c383b4ef84a +Author: Jingwei WANG +Date: Thu Oct 10 01:22:00 2019 +1000 + + add results of processed imgs + +commit 48fbc93b35a68be60f7fc0e4b4700b2faaac3402 +Author: Jingwei WANG +Date: Thu Oct 10 00:53:34 2019 +1000 + + increase noise and display oringin img + + Added more test img + +commit 6f237022b42472b48aba2ca631d178f6ff417961 +Author: Jingwei WANG +Date: Thu Oct 10 00:31:47 2019 +1000 + + high quanlity of turned image + +commit 535d03c26a31cba565d43e719cf9deb688281b73 +Author: Jingwei WANG +Date: Wed Oct 9 22:44:33 2019 +1000 + + improved image quanlity + +commit 091e6d64a104cd38dd9590e76e25a8c85695dea3 +Author: Peter Baldry +Date: Wed Oct 9 19:30:53 2019 +1000 + + computing basic histogram complete (with plot). next need to optimise some features" + +commit 1acc6ac84fdbda09b17d61b48d5f092d9fb4303b +Author: Jingwei WANG +Date: Wed Oct 9 18:27:41 2019 +1000 + + ready to revert to for loop + +commit d2fa775f420a567baadef358dfdb83c3ffdcabf9 +Author: Jingwei WANG +Date: Wed Oct 9 17:32:01 2019 +1000 + + fixed var shape + +commit b40a0df599ce069574c5465f581abaf5c1e7f0a7 +Author: tm70 +Date: Wed Oct 9 17:09:10 2019 +1000 + + Updated test script: angles and circle setting can now be provided as command line arguments + +commit a0883704fd795ddcb574c5eb3b79c6f2b7ca61d8 +Author: Jingwei WANG +Date: Wed Oct 9 16:18:24 2019 +1000 + + tf.cond pass + +commit fafbecdedc41b14591b2a0681fb92b95c3be0467 +Author: Lynn +Date: Wed Oct 9 16:16:41 2019 +1000 + + Update sigmoid function and the text code and picture. + +commit 58481a203fb705cbc8d4a96eaa2b6d9bdf117f43 +Author: Junjie Ye +Date: Wed Oct 9 15:38:07 2019 +1000 + + Create a file to store the function + +commit f8ba2262cefa5bb3d9956c28e24331c1d0a6073b +Author: iciac <47710784+iciac@users.noreply.github.com> +Date: Wed Oct 9 15:14:31 2019 +1000 + + Created using Colaboratory + +commit 2057837f61c878268e35689a4eac98637164f7e4 +Author: Peter Baldry +Date: Wed Oct 9 15:08:40 2019 +1000 + + .DS_Store banished! + +commit c619caa6b21162717e0019b1570b778f59238832 +Author: tm70 +Date: Wed Oct 9 14:25:44 2019 +1000 + + radon() with circle=False now implemented; all functionality complete. + Only optimisation left to do: enormous amounts of overhead with calls as they are not compiled to C as with the original. + + Added comments as in scikit-image implementation + +commit d2046db156ce4102cc2d045673628a993e715cf5 +Author: Jingwei WANG +Date: Wed Oct 9 14:13:50 2019 +1000 + + try to use list + +commit c98e75797deb236e15b7dc36ba6f19926705517e +Author: chrisbin07 +Date: Wed Oct 9 10:43:58 2019 +1000 + + Initial Commit - Created Exposure-Histogram directoy in metrics and added empty module script. + +commit a32ccca45a3c32360fad016bb09efd738fbdcf1e +Author: Jingwei WANG +Date: Wed Oct 9 02:32:58 2019 +1000 + + port list to TensorList + +commit a9abeb5610550f6861e2311803cc0596d8353ed5 +Author: Jingwei WANG +Date: Wed Oct 9 02:01:48 2019 +1000 + + debug nested structure + +commit 7600543feeeb28a6fd5894984004c7bbcdf77de9 +Author: Jingwei WANG +Date: Wed Oct 9 01:07:09 2019 +1000 + + progressing tf.while_loop + +commit 09d81aa5d00165c2e9ece54bd5343e077312bf94 +Author: tm70 +Date: Tue Oct 8 23:41:35 2019 +1000 + + Test script now also shows the result of the original implementation for comparison. + Implementation fixed so that the result is correct. Performance still garbage though. + Helper functions being compiled to C clearly helps a lot. + +commit 4587914545d836053704e9f4dfa5231934a3da5b +Author: tm70 +Date: Tue Oct 8 22:41:38 2019 +1000 + + Everything ported except radon where circle = False + However, results are similar but differ from original, performance very very bad + +commit f6473bf959e743de449a266c6bc7ac4ecec4956a +Author: Jingwei WANG +Date: Tue Oct 8 21:53:21 2019 +1000 + + remove ignored files + +commit 2a0914c743b067675cdc1842239a87691d139b46 +Author: Jingwei WANG +Date: Tue Oct 8 21:51:23 2019 +1000 + + updated .gitignore + +commit 1e807b0b8263bad161e23f15a7c484124aa01d46 +Author: Jingwei WANG +Date: Tue Oct 8 21:48:27 2019 +1000 + + constract tf.while_loop + +commit f1fde04f0a9b40cfd6d0bea90658509cbb38eda6 +Author: tm70 +Date: Tue Oct 8 21:46:18 2019 +1000 + + Completed porting of _warp_fast(). Untested and performance seems very bad + +commit 7871bbb27f1fdc497af914310d17d68083cb2b31 +Author: Solomon +Date: Tue Oct 8 21:19:31 2019 +1000 + + Changed norm return type as complex. + +commit 92964d64fed9afbc2f96b89d7a34f0171457ac1a +Author: Solomon +Date: Tue Oct 8 21:17:30 2019 +1000 + + Added the norm method. + +commit 90cf99cdde674e55694d84cf95cfdb56aecde2c6 +Author: Solomon +Date: Tue Oct 8 21:12:02 2019 +1000 + + Added the conjugate method. + +commit a74a8c593cbf58be2ebde50f1c2fb451892f6e7f +Author: tm70 +Date: Tue Oct 8 21:04:49 2019 +1000 + + Most of radon() now ported over to tf; all functionality for param circle=True complete. + Dodgy helper function for doing 3x3 matrix multiplication added for use in radon(). + +commit acf4aaac8e3644991802f97f8dc8f20582cd66ac +Author: Solomon +Date: Tue Oct 8 21:04:17 2019 +1000 + + Added some docstrings. Added a getNum method. + + The addition of a getNum method that returns the complex number as type python complex was added for convenience. + +commit a0ddbf184e8b388d8925e1e3a2b189973825cdfa +Author: Solomon +Date: Tue Oct 8 20:53:00 2019 +1000 + + Fixed typo. + +commit 15d117cee89b2e14766306cf68587649607432d6 +Author: Solomon +Date: Tue Oct 8 20:52:13 2019 +1000 + + Made a start to the test driver script. + +commit 613e72336eb26de3ff0851eb06f2152f1e1082f3 +Author: Solomon +Date: Tue Oct 8 20:48:10 2019 +1000 + + Made the GaussInteger class. Wrote init method. + +commit ab39d3d526e3f62e4a2920366b182c2f644a3924 +Author: Solomon +Date: Tue Oct 8 20:41:21 2019 +1000 + + First commit. Made the file that hold main functions/classes. + +commit 47d0f0c545184ddda57aa812f15aac2897411c97 +Author: tm70 +Date: Tue Oct 8 20:18:59 2019 +1000 + + bilinear_interpolation() and get_pixel2d() implemented. Appears to work but keep and eye on return values of get_pixel2d() + + Minor changes to code to work independent of eager execution mode of tensorflow + +commit ac21b74ac03084b194a98f8930fdaaf613b6a4b2 +Author: tm70 +Date: Tue Oct 8 19:24:27 2019 +1000 + + Stubs for all required helper functions created + +commit d71c1eb0bf8eaee9ac0723a0dcf4d57db2cf30a8 +Author: Peter Baldry +Date: Tue Oct 8 19:23:02 2019 +1000 + + load image, get shape and flatten complete + +commit e1607a424884accdfb3d17340cdf6a992e1c3bf5 +Author: tm70 +Date: Tue Oct 8 19:00:55 2019 +1000 + + Added skeleton of helper method called at end of radon() + +commit a66e411274081374bac24157b62cab8a6c2b86c0 +Author: Jingwei WANG +Date: Tue Oct 8 18:29:04 2019 +1000 + + remove commented code + +commit ced865e615f89f826d6352853ca3b353f529cf19 +Author: Jingwei WANG +Date: Tue Oct 8 18:15:02 2019 +1000 + + low quanlity of output image + +commit 40cbbe17c6b0d63d23706ea2aa28d3950e9df8b9 +Author: Jingwei WANG +Date: Tue Oct 8 18:06:53 2019 +1000 + + wiener fixed, main has bugs + +commit 252b956c658b6e8f687da5cddc621aaf05b60661 +Author: Jingwei WANG +Date: Tue Oct 8 17:53:12 2019 +1000 + + fixed slow runtime in the for loop + +commit 6216e1003cb902fe39adc5d5a50cf4ac6068aa16 +Author: Ting-Chen Shang +Date: Tue Oct 8 17:53:01 2019 +1000 + + Added requirements.txt (not sure if all of them are required, but just tf, numpy, and scikit-image). + +commit 13a98224e9b059e38628ee5ce0396d2c732f62ad +Author: Ting-Chen Shang +Date: Tue Oct 8 17:27:40 2019 +1000 + + Prefixed the folder name with student number. + +commit 130e3ca3c06eadaa583001fea4282e57b9f30e20 +Author: Ting-Chen Shang +Date: Tue Oct 8 17:26:57 2019 +1000 + + Added gitignore. + +commit d85f8f7e204adad89ca0aaf2469c8b315f3c9052 +Author: Lawrence +Date: Tue Oct 8 15:20:16 2019 +1000 + + [develop] Update author information. 45702024. + +commit 93e8aae852be12ab2e5902f9e48a26fccc04be12 +Author: Lawrence +Date: Tue Oct 8 15:15:29 2019 +1000 + + [develop] Complete gamma correction with README.md + +commit c41fb5158b59b19478669fdb21b9160a2a615ced +Author: tm70 +Date: Tue Oct 8 13:57:31 2019 +1000 + + Ported construction of reconstruction_circle over to TF + +commit b3990b01b03bf3b3a44ad91a6169618f41d46d0e +Author: tshang +Date: Tue Oct 8 13:40:20 2019 +1000 + + Added convert_to_float function from scikit but not yet changed to tf version. + +commit 969dcbb25b23f9328cffbbad497d5f6b8c488610 +Author: tshang +Date: Tue Oct 8 13:31:46 2019 +1000 + + Initial commit. + +commit 4bb564e40e6297be93455d61b7125e9f229e5532 +Author: Jingwei WANG +Date: Tue Oct 8 13:03:23 2019 +1000 + + iteration working + +commit f5c7b7733f1e62bcffd88e43cde6b1fe604fb4e8 +Merge: 98fcf2c7 caacfd94 +Author: Shakes +Date: Mon Oct 7 17:07:15 2019 +1000 + + Merge pull request #2 from naziah28/topic-fractals + + add Barnsley Fern to Topic fractals + +commit c2169feef967e9d47cd6069bad4fd3adc4905fb5 +Author: Jingwei WANG +Date: Mon Oct 7 17:01:18 2019 +1000 + + add original method to debug + + compare with ported one + +commit f12d2e3db99e2c0348736dc6585339e51c727275 +Author: Taotao Pan +Date: Mon Oct 7 15:53:20 2019 +1000 + + UPDATE: add torch.float64 to dtype_range + +commit a19b2b067d470f31e72c979f76b26bc8745b64e0 +Author: Taotao Pan +Date: Mon Oct 7 15:52:51 2019 +1000 + + ADD: func rescale_intensity + +commit 76f846fd3a2861b1b4507c2aa42dbf445dd0bdab +Author: Taotao Pan +Date: Mon Oct 7 15:52:28 2019 +1000 + + UPDATE: finish all test cases for intensity_range + +commit faa082f5d0f91ff2438e5914ecf08903e13c6d72 +Author: Jingwei WANG +Date: Mon Oct 7 15:07:49 2019 +1000 + + fixed ir2tf + +commit b2abf603c724c56cbbca7f7c81dff3a6b01af473 +Author: Taotao Pan +Date: Mon Oct 7 15:02:06 2019 +1000 + + ADD: np.interp reimplementation + +commit 8e1911fbcef87bb850a220a881ff25ac68b4ff99 +Author: Taotao Pan +Date: Mon Oct 7 15:01:34 2019 +1000 + + UPDATE: finish all test cases for equalization func + +commit 50b1235654cd6320820e5b67460b5375e8ff9b55 +Author: Taotao Pan +Date: Mon Oct 7 15:00:51 2019 +1000 + + ADD: func intensity range + +commit df87d057a44701d1c45a964a928331001d2108b1 +Author: Jingwei WANG +Date: Mon Oct 7 14:39:11 2019 +1000 + + change to load local image + +commit 4c053417ab97d51c66e9d634db1778aed4beef2f +Author: Jingwei WANG +Date: Mon Oct 7 14:26:41 2019 +1000 + + Update .gitignore + +commit 7450098def9f28b75efe811d8e579c52bfb6eae6 +Author: Jingwei WANG +Date: Mon Oct 7 14:24:20 2019 +1000 + + created .gitignore + +commit a9292d088f4997e470efba20735fd86a20d82211 +Author: tm70 +Date: Sun Oct 6 15:39:15 2019 +1000 + + Added script to visualise the transform for testing purposes. + Couple extra lines ported from original implementation to tf. + +commit 61cb10d9c70660eeaf7f20931d96f12902feb0c6 +Author: tm70 +Date: Sun Oct 6 13:18:48 2019 +1000 + + Initial commit + +commit 295e54db12bc28a584873f0f4b727b66be484465 +Author: Peter Baldry +Date: Sun Oct 6 09:34:10 2019 +1000 + + moved library into image folder + +commit cc7c37cc71ab936b2d81b9d19f651c599f070550 +Author: Peter Baldry +Date: Sun Oct 6 09:27:47 2019 +1000 + + init commit - skeleton driver, module script, readme created + +commit 1d2340ad64bafb2d08e4fe69ecaa6474aec480ba +Author: Jingwei WANG +Date: Sat Oct 5 22:08:01 2019 +1000 + + laplacian fixed + +commit 53ecb85aa25c662bfdba12609c7ea5c9d0b7e5da +Author: Jingwei WANG +Date: Sat Oct 5 21:13:33 2019 +1000 + + changed to spyder + +commit 6ec0c4f0d47c2f19e57a93e042e0ef7112c5d42d +Author: Jingwei WANG +Date: Thu Oct 3 21:21:16 2019 +1000 + + laplacian methods updated + +commit c4310f4f6c819edf7578c6d8334bcf15307845f0 +Author: Jingwei WANG +Date: Thu Oct 3 19:02:15 2019 +1000 + + turned to tf from np + + did't run yet + +commit b6f79393c4a2739561c2583e61b8e7118bd61a0a +Author: Jingwei WANG +Date: Thu Oct 3 15:51:34 2019 +1000 + + add full seg of original code + + some methods from other pakage need to be implement loaclly + +commit db4c9009b6a39e1688672942e601af1bd1333451 +Author: Jingwei WANG +Date: Thu Oct 3 15:13:21 2019 +1000 + + create main and wiener + + changed part of code to tf + +commit 914e16711027ee8e6d71774a7405fbd77f277859 +Author: Jingwei WANG +Date: Thu Oct 3 13:59:47 2019 +1000 + + initial files + + creat folder and readme + +commit 81d116662fbd7ab2df9c94ae23747c3a229f3164 +Author: Taotao Pan +Date: Thu Oct 3 10:23:19 2019 +1000 + + UPDATE: test image tensor type decorator + +commit cc02b940c4ad124d2205d4e41574483331c17741 +Author: Taotao Pan +Date: Thu Oct 3 10:22:47 2019 +1000 + + ADD: function cumuative_distribution + +commit 0717a550c4158e1083525b9e9aa994c8fffb80a6 +Author: Taotao Pan +Date: Wed Oct 2 21:21:56 2019 +1000 + + UPDATE: integer type for dtype_range + +commit d3184e9a815e14a5f32e3642a70ab01f3a6065b7 +Author: Taotao Pan +Date: Wed Oct 2 21:21:05 2019 +1000 + + UPDATE: finish histogram + +commit b4b0ae2b3bf1042e244eb0f7131d3cedf281bb0d +Author: Taotao Pan +Date: Wed Oct 2 21:20:51 2019 +1000 + + UPDATE: all test for histogram + +commit 4ce3ebce2371abea41b50bc1d65648ca3f17fd4b +Author: Taotao Pan +Date: Tue Oct 1 17:50:43 2019 +1000 + + UPDATE: pytorch version + +commit b38833a1ddb4f60d544908e8616a9c1a9d4f6df2 +Author: Taotao Pan +Date: Tue Oct 1 15:43:36 2019 +1000 + + UPDATE: histogram to handle integer type case + +commit 9d53d24f333e20d1b01a73950b2572f14a5a9a1d +Author: Taotao Pan +Date: Tue Oct 1 15:42:59 2019 +1000 + + UPDATE: dtype_limits return value + +commit 3635add9b72dd0efcf629c0abd918cd469a6abf3 +Author: antoinedelplace <34864698+antoinedelplace@users.noreply.github.com> +Date: Tue Oct 1 12:34:24 2019 +1000 + + Detail the grayscale requirement for pbvif + +commit 286597c75efd15358c27c907e4549ea8f2f246fc +Author: antoinedelplace <34864698+antoinedelplace@users.noreply.github.com> +Date: Tue Oct 1 12:19:04 2019 +1000 + + Wrap driver in main() function + +commit 6556acaf9207de5fae98441edc95f1b544cd40bd +Author: antoinedelplace <34864698+antoinedelplace@users.noreply.github.com> +Date: Tue Oct 1 10:41:34 2019 +1000 + + Add README.md + +commit bc15ecd83008136a079bf19501215475b330169c +Author: Taotao Pan +Date: Mon Sep 30 15:27:08 2019 +1000 + + UPDATE: test case for is_type_integer_family + +commit 966591ccd77e353ed73ed9fa0b24ba88db61d944 +Author: Taotao Pan +Date: Mon Sep 30 15:26:17 2019 +1000 + + ADD: function _bin_count_histogram to fast calc int dtype. + +commit 98dc6a98b8e624d7ef9f08310032c75413eaad39 +Author: Taotao Pan +Date: Mon Sep 30 15:25:17 2019 +1000 + + ADD: function to check if dtype in integer or not + +commit 8829ce27f7a409ce0ff4198e3c3b014b7fc3f4e3 +Author: antoinedelplace <34864698+antoinedelplace@users.noreply.github.com> +Date: Mon Sep 30 15:06:17 2019 +1000 + + Remove tensorflow warnings and handle arguments for driver + +commit 72c3252e70d1ab5587172873bce84efe068479ca +Author: antoinedelplace <34864698+antoinedelplace@users.noreply.github.com> +Date: Mon Sep 30 14:31:34 2019 +1000 + + Add comment, documentation and rename variables + +commit 1e6342bb08d26c1d4626de271b85dd11a2855b56 +Author: antoinedelplace <34864698+antoinedelplace@users.noreply.github.com> +Date: Mon Sep 30 13:44:11 2019 +1000 + + Change pbvif to handle several images at the same time + +commit 76f347795e3b7c33775c323e3e31fcd58f5f1a71 +Author: antoinedelplace <34864698+antoinedelplace@users.noreply.github.com> +Date: Mon Sep 30 13:31:03 2019 +1000 + + Add 3 mode options for convolution: nearest, symmetric and constant + +commit bdd78e804636b9db0df9d425141c8d8fcb50bdaf +Author: antoinedelplace <34864698+antoinedelplace@users.noreply.github.com> +Date: Mon Sep 30 13:16:59 2019 +1000 + + Add driver to test the function. Remove numpy from vif.py + +commit fc89c69de92fd394b79ca2ff4b67798528f9648f +Author: antoinedelplace <34864698+antoinedelplace@users.noreply.github.com> +Date: Mon Sep 30 13:06:59 2019 +1000 + + Add 4 test images + +commit 83b24f04e4ad0ac55c6768d8659fff48dbf81dbb +Author: antoinedelplace <34864698+antoinedelplace@users.noreply.github.com> +Date: Mon Sep 30 13:05:52 2019 +1000 + + Add Pixel-Based Visual Information Fidelity function + +commit 5e44f326613f2988f3d3e6dfe0434ba4a16e0f5f +Author: youwen +Date: Sun Sep 29 14:40:34 2019 +1000 + + added build status + +commit 049638041794951ad04d5edd293f90aa916ac7f2 +Author: youwen +Date: Sun Sep 29 14:05:22 2019 +1000 + + added absolute path to test files + +commit 728d2d55162413d299ff09cf80dd7d1dc2641c3a +Author: youwen +Date: Sun Sep 29 13:34:08 2019 +1000 + + added 'How is works' in README + +commit b9371469a26dba490a118ec692942d7c46090b39 +Author: antoinedelplace <34864698+antoinedelplace@users.noreply.github.com> +Date: Sun Sep 29 13:09:41 2019 +1000 + + Initial commit VIF + +commit 6baf97fbfd896c600a83c6b857839afb37704376 +Author: Taotao Pan +Date: Sun Sep 29 11:05:03 2019 +1000 + + UPDATE: list dependencies + +commit 13148879b6e7d0b86317aec7ab87f250902b6a9f +Author: Taotao Pan +Date: Sun Sep 29 08:14:51 2019 +1000 + + UPDATE: ignore mypy static checker config file + +commit cd5cbc6a299dc1b39156da21b353882878b63533 +Author: youwen +Date: Sun Sep 29 01:16:35 2019 +1000 + + updated 'how to use' of README + +commit 80e697dcdb2bc9f073ae99b4aebb391ec07820f5 +Author: youwen +Date: Sun Sep 29 00:46:57 2019 +1000 + + updated description and installation of README. + +commit d0728ef9648bee75f1c6df7584ab34777fc5f4a5 +Author: youwen +Date: Sat Sep 28 22:40:33 2019 +1000 + + added sample usage file, typo fixed + +commit 98e6e7454b64e7da43899d753de3c2548296538e +Author: youwen +Date: Sat Sep 28 21:54:09 2019 +1000 + + move files to denoise from image + +commit d76fe802704bce9fd42372beab37ffab669910fc +Author: youwen +Date: Sat Sep 28 21:13:02 2019 +1000 + + added test scripts for each method + +commit ff257de000a70ce8bce6b0b0e0f13ca0ecc0fae8 +Author: youwen +Date: Sat Sep 28 17:31:53 2019 +1000 + + added tests of astronaut for wiener, fixed data type error of _ir2tf + +commit 1c52632a1bfff92aff6598d615d1523a037d1e98 +Author: youwen +Date: Sat Sep 28 15:51:45 2019 +1000 + + removed useless parameter + +commit 05eb983f73bd27df9b5385bdfe44b41da85b6672 +Author: youwen +Date: Sat Sep 28 14:01:14 2019 +1000 + + fully functional with some bugs fixed + +commit 0a03afca54fe9965492ab5598c9023a39d318d72 +Author: youwen +Date: Sat Sep 28 13:33:16 2019 +1000 + + fixed bugs + +commit 2ebe53d1393fcc05e3fbe048a4beab4c295ebb9c +Author: youwen +Date: Sat Sep 28 13:32:37 2019 +1000 + + fixed missing arg for _ir2tf call, added the rest of part of wiener + +commit efe5caab719911521fb1c9b6fc9fff962e05c61f +Author: youwen +Date: Sat Sep 28 03:15:20 2019 +1000 + + fixed shape error when imp_resp is ndarray + +commit 7800dbed5d2e1d3b3e8d4be15a22db3145789f49 +Author: youwen +Date: Sat Sep 28 03:08:48 2019 +1000 + + finished laplacian method, fixed imp_resp(tensor) type error bug + +commit ebf7b3fda39db2482062d306caf99d17be24697e +Author: Taotao Pan +Date: Sat Sep 28 01:55:13 2019 +1000 + + UPDATE: first test case for function calc_bin_centers + +commit 22d1d521a99b03ee9bac905ad1ad296631c0a247 +Author: Taotao Pan +Date: Sat Sep 28 01:54:35 2019 +1000 + + UPDATE: implement histogram function + +commit eb374d132b8b507ba0e8416861a5d8e0f73a45d2 +Author: Taotao Pan +Date: Sat Sep 28 01:54:11 2019 +1000 + + ADD: init file + +commit 7b7e2931cc13345896f0e597b6f680365c88bb19 +Author: youwen +Date: Sat Sep 28 01:35:42 2019 +1000 + + fixed bugs of _ir2tf + +commit f35a42438956f1b4c589d23fa28e555da19f3a8e +Author: Taotao Pan +Date: Fri Sep 27 16:59:57 2019 +1000 + + ADD: construct file tree + +commit 81501f185758618c841a871ae1cabdc45a1a3711 +Author: Taotao Pan +Date: Fri Sep 27 16:59:41 2019 +1000 + + ADD: readme file + +commit 11e88a67a689de51a0133e493f39a93d3e707688 +Author: Taotao Pan +Date: Fri Sep 27 16:59:31 2019 +1000 + + DELETE: move created file to new folder + +commit 0c2c3d74e7feabcdbbb963c4d7e85ebaa120dad5 +Merge: 054918cf 5dd102d0 +Author: Taotao Pan +Date: Fri Sep 27 16:53:45 2019 +1000 + + Merge remote-tracking branch 'remotes/upstream/topic-algorithms' + +commit 94ff70661d5f96e3889d795e894cf18da715a9e1 +Author: youwen +Date: Fri Sep 27 16:12:46 2019 +1000 + + finished IR transfer function + +commit 7c3fdccf49f5ef9fcd89c4a1265f62f3303ad6ec +Author: youwen +Date: Fri Sep 27 15:17:46 2019 +1000 + + made internal-use method private, finished splitting matrix + +commit 1b2228c56160def821093f61257a551d9fa0a14a +Author: youwen +Date: Fri Sep 27 15:09:46 2019 +1000 + + added README + +commit 3a4d7ddee03c3a45f6b812c20da2a1ebb68b75df +Author: youwen +Date: Fri Sep 27 15:09:22 2019 +1000 + + initial + +commit 5dd102d086dcf3f77275cd4655e5d98eeb15ecb9 +Author: Shekhar Chandra Home Windows +Date: Fri Sep 27 14:18:38 2019 +1000 + + Updated the names of the folder READMEs + +commit bfd76c69591c0161908c446388adb8aa28186488 +Author: Shekhar Chandra Home Windows +Date: Fri Sep 27 14:16:21 2019 +1000 + + Added folders for algorithms and relevant READMEs. + +commit 054918cf139661367d7280eac7040eb19ffe07b1 +Author: Taotao Pan +Date: Fri Sep 27 08:30:37 2019 +1000 + + ADD: construct file tree + +commit 4935467b4e28b8f2c3857a1541027fd7adb15f72 +Author: Taotao Pan +Date: Fri Sep 27 08:29:54 2019 +1000 + + ADD: gitignore file + +commit 32363345b0e2054d06a8180fb38b153c50382304 +Author: Taotao Pan +Date: Fri Sep 27 08:28:51 2019 +1000 + + ADD: readme file + +commit caacfd9416ea704cc1906c0511be98d0dbae160c +Author: Naziah +Date: Sun Sep 22 10:42:34 2019 +1000 + + update readme.md + +commit 5b10bbbe5231f6bdeb888210403aee5fc53d4a62 +Author: Naziah +Date: Sun Sep 22 10:35:47 2019 +1000 + + added barnsley fern to patterflow fractals + +commit 98fcf2c746179a65c4958606af73714721a4e02c +Merge: 41ddc397 9baf561e +Author: Shakes +Date: Sat Sep 21 12:39:36 2019 +1000 + + Merge pull request #1 from antoinedelplace/pull-request-lyapunov + + Pull request Lyapunov fractal from Antoine + +commit 9baf561e1ddf91976494e360aec5a7fcc4351c91 +Author: antoinedelplace <34864698+antoinedelplace@users.noreply.github.com> +Date: Fri Sep 20 15:40:47 2019 +1000 + + Remove pycache (pyc) + +commit 430d2006767595f69b7b7e11a4a1542408461fe2 +Author: antoinedelplace <34864698+antoinedelplace@users.noreply.github.com> +Date: Thu Sep 19 12:21:46 2019 +1000 + + Lyapunov fractal commit + +commit 41ddc3973556863e22c3c61f96dae4949b27e258 +Author: Shekhar S. Chandra +Date: Wed Sep 18 23:13:24 2019 +1000 + + Added text highlight contributing proceedure for fractals. + +commit 8e2c18fe265be0b6ae18dac382e5da0010941b57 +Author: Shekhar S. Chandra +Date: Wed Sep 18 22:59:03 2019 +1000 + + Added a branch for fractal algorithms to be contributed. + +commit 6a0235202fd1a085658b6cdefca60ef0f47d7b6a +Author: Shakes +Date: Mon Jul 15 20:56:35 2019 +1000 + + Initial commit