Fix CI docs build

.gitignore

@@ -4,12 +4,15 @@
 docs/build
 docs/site
 docs/src/api/ordinarydiffeq
+docs/src/api/stochasticdiffeq
 docs/ordinarydiffeq_pages.jl
+docs/stochasticdiffeq_pages.jl
 docs/common_first_steps.jl
-/Manifest.toml
+docs/common_imex_first_steps.jl
 
 # vscode stuff
 .vscode
 .vscode/*
 
-Manifest.toml
+docs/src/assets/Project.toml
+Manifest.toml

docs/make.jl

@@ -28,10 +28,12 @@ if isdir(ordinartdiffeq_docs_path)
     ordinary_diffeq_pages_file = joinpath(ordinartdiffeq_docs_root, "pages.jl")
     cp(ordinary_diffeq_pages_file, ordinary_diffeq_pages_dest, force = true)
 
-    # Copy the common_first_steps.jl file from OrdinaryDiffEq.jl
-    common_first_steps_dest = joinpath(@__DIR__, "common_first_steps.jl")
-    common_first_steps_file = joinpath(ordinartdiffeq_docs_root, "common_first_steps.jl")
-    cp(common_first_steps_file, common_first_steps_dest, force = true)
+    # Copy the common_first_steps.jl and common_imex_first_steps.jl files from OrdinaryDiffEq.jl
+    for fname in ["common_first_steps.jl", "common_imex_first_steps.jl"]
+        common_first_steps_dest = joinpath(@__DIR__, fname)
+        common_first_steps_file = joinpath(ordinartdiffeq_docs_root, fname)
+        cp(common_first_steps_file, common_first_steps_dest, force = true)
+    end
 end
 
 # Copy StochasticDiffEq.jl documentation

docs/src/examples/classical_physics.md

@@ -152,7 +152,7 @@ p = Plots.plot(sol, vars = (1, 2), xlims = (-9, 9), title = "Phase Space Plot",
 function phase_plot(prob, u0, p, tspan = 2pi)
     _prob = ODE.ODEProblem(prob.f, u0, (0.0, tspan))
     sol = ODE.solve(_prob, ODE.Vern9()) # Use Vern9 solver for higher accuracy
-    Plots.plot!(p, sol, idxs = (1, 2), xlims = nothing, ylims = nothing)
+    Plots.plot!(p, sol, idxs = (1, 2))
 end
 for i in (-4pi):(pi / 2):(4π)
     for j in (-4pi):(pi / 2):(4π)

docs/src/features/dae_initialization.md

@@ -1,4 +1,4 @@
-# DAE Initialization
+# [DAE Initialization](@id dae_initialization)
 
 DAE (Differential-Algebraic Equation) problems often require special initialization procedures to ensure that the initial conditions are consistent with the algebraic constraints. The DifferentialEquations.jl ecosystem provides several initialization algorithms to handle this automatically or to verify that your provided initial conditions are already consistent.
 
@@ -213,4 +213,4 @@ sol = solve(prob, IDA(), initializealg = CheckInit())    # Sundials
 ## References
 
 - Brown, P. N., Hindmarsh, A. C., & Petzold, L. R. (1998). Consistent initial condition calculation for differential-algebraic systems. SIAM Journal on Scientific Computing, 19(5), 1495-1512.
-- Shampine, L. F. (2002). Consistent initial condition for differential-algebraic systems. SIAM Journal on Scientific Computing, 22(6), 2007-2026.
+- Shampine, L. F. (2002). Consistent initial condition for differential-algebraic systems. SIAM Journal on Scientific Computing, 22(6), 2007-2026.

docs/src/tutorials/dae_example.md

@@ -165,7 +165,7 @@ sol_check = DE.solve(prob, Sundials.IDA(), initializealg = DiffEqBase.CheckInit(
 ```
 
 For more details on DAE initialization options, see the
-[DAE Initialization documentation](@ref dae_initialization).
+[DAE Initialization documentation](@ref "dae_initialization").
 
 In order to clearly see all the features of this solution, it should be plotted
 on a logarithmic scale. We'll also plot each on a different subplot, to allow