Pre-Model Refactor

This release aims to create a stable build prior to the major refactoring of the Model. Below are the pull requests and change-log.

What's Changed

• Yaml refactor by @AdvancedImagingUTSW in #31
• Cam view by @codeCollision4 in #35
• Add multi_position controller by @annie-xd-wang in #40
• Camera attempt by @AdvancedImagingUTSW in #43
• Refactored experiment.yml by @annie-xd-wang in #42
• First pass with laser base by @AdvancedImagingUTSW in #44
• Model in process test merge by @AdvancedImagingUTSW in #51
• Model in process by @annie-xd-wang in #50
• Swampland 2 by @AdvancedImagingUTSW in #57
• Evaluation of Widget List by @AdvancedImagingUTSW in #60
• Log changes by @zacsimile in #75
• Logging on Model, Controller, and View by @Rapuris in #76
• Logger now works on Model by @codeCollision4 in #78
• First approx camera noise model by @zacsimile in #79
• GitHub Action for running unit tests by @zacsimile in #82
• Synthetic hardware test by @zacsimile in #83
• Add codecov by @zacsimile in #84
• Add codecov by @zacsimile in #85
• Fix codecov path by @zacsimile in #86
• Remove CUDA from workflow by @zacsimile in #87
• #81 Error handling now in place by @codeCollision4 in #93
• Updates for the Camera View - Lookup Table by @AdvancedImagingUTSW in #94
• Update image saving workflow by @annie-xd-wang in #95
• Dax dev - Thread Names and Zarr wireup by @AdvancedImagingUTSW in #102
• Move from src to src/aslm by @zacsimile in #104
• Fix refactor by @zacsimile in #105
• Propagate remaining changes by @zacsimile in #106
• Startup functions tweak by @zacsimile in #108
• Basic Setup.py by @codeCollision4 in #111
• Dax dev - Zarr Implementation/Created dummy model/Updated paths for packaging by @codeCollision4 in #113
• Log and synthetic hardware fixes by @zacsimile in #114
• Dax dev - Zarr Implementation and Test are now functional by @codeCollision4 in #120
• Reorganize model by @annie-xd-wang in #123
• Z stack upgrade by @AdvancedImagingUTSW in #124
• Cleanup and comment by @AdvancedImagingUTSW in #125
• Logging and parser by @zacsimile in #127
• Enhance setup, skip some tests by @zacsimile in #130
• Validated spinboxes by @codeCollision4 in #131
• Merge sides by @AdvancedImagingUTSW in #132
• Cleanup and comment by @AdvancedImagingUTSW in #137
• Tiling Wizard by @codeCollision4 in #139
• Lazy tiff loader for prototyping by @zacsimile in #138
• Cleanup, MoveJog and TLI_DeviceInfo by @zacsimile in #141
• WASD/Mousewheel by @Rapuris in #134
• Laser settings by @Rapuris in #142
• Automatically change resolution by @annie-xd-wang in #146
• Tiling wizard now populates multi position table by @codeCollision4 in #145
• Non live display by @AdvancedImagingUTSW in #148
• Fix for #140 by @codeCollision4 in #150
• Gui refactoring by @codeCollision4 in #156
• Validatedspin editable - Class fix by @codeCollision4 in #151
• Headless Gui Tests by @codeCollision4 in #152
• Update tests by @zacsimile in #154
• Metadata implementation by @zacsimile in #155
• Update Feature Container by @annie-xd-wang in #158
• Verbose is now removed and logger is in its place by @codeCollision4 in #161
• Gui requests post chaos by @codeCollision4 in #160
• Keystroke controller by @codeCollision4 in #167
• Random fixes + trackpad scrolling for scrollbars by @zacsimile in #168
• Redesign gui by @codeCollision4 in #171
• Dockable notebook by @codeCollision4 in #173
• Metadata and image writers by @zacsimile in #172
• Better chunking by @zacsimile in #174
• Save fixes by @zacsimile in #175
• Hover class integration by @Elepicos in #177
• Tests etc by @zacsimile in #179
• support multi-position in per-stack and per-slice by @annie-xd-wang in #181
• Add cleanup support by @annie-xd-wang in #186
• Shannon Entropy: Convert to log2 and test by @zacsimile in #184

New Contributors

• @annie-xd-wang made their first contribution in #40
• @zacsimile made their first contribution in #75
• @Elepicos made their first contribution in #177

Full Changelog: https://github.com/TheDeanLab/ASLM/commits/v0.0.1-alpha