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Fix: pubmed format #857

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Fix: pubmed format #857

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f67d537
Corrige importação
Rossi-Luciano Jan 31, 2025
25bac60
Corrige a obtenção de 'title'
Rossi-Luciano Jan 31, 2025
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14 changes: 8 additions & 6 deletions packtools/sps/formats/pubmed.py
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Original file line number Diff line number Diff line change
Expand Up @@ -6,13 +6,13 @@
article_abstract,
article_and_subarticles,
article_authors,
article_citations,
article_ids,
article_titles,
dates,
front_articlemeta_issue,
journal_meta,
kwd_group,
references
)


Expand Down Expand Up @@ -169,9 +169,10 @@ def xml_pubmed_article_title_pipe(xml_pubmed, xml_tree):
</ArticleTitle>
"""
title = get_article_titles(xml_tree)
if title.get("en") is not None:
title_text = title.get("en", {}).get("text")
if title_text is not None:
el = ET.Element("ArticleTitle")
el.text = title.get("en")
el.text = title_text
xml_pubmed.append(el)


Expand All @@ -183,9 +184,10 @@ def xml_pubmed_vernacular_title_pipe(xml_pubmed, xml_tree):
"""
main_lang = article_and_subarticles.ArticleAndSubArticles(xml_tree).main_lang
title = get_article_titles(xml_tree)
if title.get(main_lang) is not None:
title_text = title.get(main_lang, {}).get("text")
if title_text is not None:
el = ET.Element("VernacularTitle")
el.text = title.get(main_lang)
el.text = title_text
xml_pubmed.append(el)


Expand Down Expand Up @@ -620,7 +622,7 @@ def xml_pubmed_citations(xml_pubmed, xml_tree):
</Reference>
</ReferenceList>
"""
refs = article_citations.ArticleCitations(xml_tree).article_citations
refs = references.ArticleReferences(xml_tree).article_references
xml = xml_pubmed.find("./ReferenceList")
for ref in refs:
ref_el = ET.Element("Reference")
Expand Down