FEAT: Add example for EHR uncertainty with custom data wrapper #497
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This PR adds an example demonstrating how preprocessed custom sequential data (e.g., for EHR analysis) can be integrated with PyHealth using the
pyhealth.datasets.SampleEHRDataset
class.It includes:
examples/ehr_uncertainty_analysis_example/pyhealth_custom_dataset_wrapper.py
: The wrapper class.examples/ehr_uncertainty_analysis_example/uncertainty_wrapper_example.ipynb
: A notebook showing its usage with illustrative data.