Tools for MRI mouse brain morphometry
Codes related to paper "Automated sleep stage classification of wide-field calcium imaging data via multiplex visibility graphs and deep learning"
Codes related to the paper "Attention-Based CNN-BiLSTM for Sleep States Classification of Spatiotemporal Wide-Field Calcium Imaging Data"
The Mouse Hippocampal Brain Stack Dataset is a high-resolution dataset of serial-section microscopic images of the hippocampal region in a mouse brain. It is designed to support research on 3D reconstruction and non-rigid registration techniques.
Image Slicing with overlap. Takes an image, asks for user input about the number of rows and columns and slices into even parts. Customizable parameters.
A Python tool for mapping electrophysiology recording sites onto standardized mouse brain coordinates. Supports coronal, axial, and sagittal views with rapid visualization of electrophysiological data and anatomical locations.
Computational Neuroscience (SYDE 552)
Windows of Susceptibility Analysis for Brain Diseases
Mouse brain proteins database for the course of "Introduction to Biotechnology" of the MSc DSIT @ NKUA.
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