fix: sqlite always not work and another things

.github/dependabot.yml

@@ -0,0 +1,33 @@
+# To get started with Dependabot version updates, you'll need to specify which
+# package ecosystems to update and where the package manifests are located.
+# Please see the documentation for all configuration options:
+# https://docs.github.com/github/administering-a-repository/configuration-options-for-dependency-updates
+
+# docs
+# https://docs.github.com/en/code-security/dependabot/dependabot-version-updates/configuration-options-for-the-dependabot.yml-file
+version: 2
+updates:
+  - package-ecosystem: "gradle"
+    directory: "/"
+    schedule:
+      interval: "weekly"
+      # We release on Tuesdays and open dependabot PRs will rebase after the
+      # version bump and thus consume unnecessary workers during release, thus
+      # let's open new ones on Wednesday
+      day: "wednesday"
+    ignore:
+      - dependency-name: "*"
+        update-types: ["version-update:semver-patch"]
+    groups:
+      # Only update polars as a whole as there are many subcrates that need to
+      # be updated at once. We explicitly depend on some of them, so batch their
+      # updates to not take up dependabot PR slots with dysfunctional PRs
+      polars:
+        patterns:
+          - "polars"
+          - "polars-*"
+  - package-ecosystem: "github-actions"
+    directory: "/"
+    schedule:
+      interval: "weekly"
+      day: "wednesday"

.github/workflows/build.yml

@@ -17,12 +17,14 @@ jobs:
     steps:
       - uses: actions/checkout@v4
       - name: Setup JDK
-        uses: actions/setup-java@v3
+        uses: actions/setup-java@v4
         with:
           distribution: 'temurin'
           java-version: ${{ matrix.java }}
       - name: Setup Gradle
-        uses: gradle/gradle-build-action@v2
+        uses: gradle/actions/setup-gradle@v3
+        with:
+          cache-disabled: ${{ contains(matrix.os, 'windows') }}
       - name: Build
         run: ./gradlew :server:build :shared:build -PjavaVersion=${{ matrix.java }}
       - name: Detekt

.github/workflows/typos.yml

@@ -0,0 +1,19 @@
+---
+# yamllint disable rule:line-length
+name: check_typos
+
+on:  # yamllint disable-line rule:truthy
+  push:
+  pull_request:
+    branches:
+      - '**'
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: typos-action
+        uses: crate-ci/typos@v1.29.4

_typos.toml

@@ -0,0 +1,6 @@
+[files]
+extend-exclude = ["server/src/test/resources/completions/*.kt"]
+
+[default.extend-words]
+ba = "ba"
+vertx = "vertx"

build.gradle.kts

@@ -24,7 +24,7 @@ detekt {
 // Registers a baseline for Detekt.
 //
 // The way it works is that you set create "baseline" for Detekt
-// by running this task. It will then creatae a detekt-baseline.xml which
+// by running this task. It will then create a detekt-baseline.xml which
 // contains a list of current issues found within the project.
 // Then every time you run the "detekt" task it will only report errors
 // that are not in the baseline config.
@@ -33,6 +33,7 @@ detekt {
 // fix detekt issues so that we can prevent regressions.
 tasks.register<DetektCreateBaselineTask>("createDetektBaseline") {
     description = "Overrides current baseline."
+    group = "verification"
     buildUponDefaultConfig.set(true)
     ignoreFailures.set(true)
     parallel.set(true)

detekt.yml

@@ -10,6 +10,10 @@ comments:
 
 complexity:
   excludes: *standardExcludes
+  CyclomaticComplexMethod:
+    threshold: 25
+  NestedBlockDepth:
+    threshold: 10
 
 empty-blocks:
   excludes: *standardExcludes
@@ -24,6 +28,8 @@ exceptions:
       - NumberFormatException
       - ParseException
       - MissingPropertyException
+  TooGenericExceptionCaught:
+    active: false
 
 naming:
   excludes: *standardExcludes
@@ -38,6 +44,9 @@ style:
   excludes: *standardExcludes
   MaxLineLength:
     active: false
+  ReturnCount:
+    active: true
+    max: 3  # Maximum allowed return statements in a function
   WildcardImport:
     excludeImports:
       - java.util.*

detekt_baseline.xml

@@ -2,7 +2,7 @@
 <SmellBaseline>
   <ManuallySuppressedIssues></ManuallySuppressedIssues>
   <CurrentIssues>
-    <ID>ComplexCondition:SemanticTokens.kt$element is KtVariableDeclaration &amp;&amp; (!element.isVar || element.hasModifier(KtTokens.CONST_KEYWORD)) || element is KtParameter</ID>
+    <ID>ComplexCondition:SemanticTokens.kt$element is KtVariableDeclaration &amp;&amp; (!element.isVar() || element.hasModifier(KtTokens.CONST_KEYWORD)) || element is KtParameter</ID>
     <ID>CyclomaticComplexMethod:Completions.kt$private fun elementCompletions(file: CompiledFile, cursor: Int, surroundingElement: KtElement): Sequence&lt;DeclarationDescriptor&gt;</ID>
     <ID>CyclomaticComplexMethod:Completions.kt$private fun indexCompletionItems(file: CompiledFile, cursor: Int, element: KtElement?, index: SymbolIndex, partial: String): Sequence&lt;CompletionItem&gt;</ID>
     <ID>CyclomaticComplexMethod:GoToDefinition.kt$fun goToDefinition( file: CompiledFile, cursor: Int, classContentProvider: ClassContentProvider, tempDir: TemporaryDirectory, config: ExternalSourcesConfiguration, cp: CompilerClassPath ): Location?</ID>
@@ -26,7 +26,7 @@
     <ID>EmptyClassBlock:samefile.kt$MyImplClass${}</ID>
     <ID>EmptyClassBlock:samefile.kt$NullClass${}</ID>
     <ID>EmptyClassBlock:samefile.kt$PrintableClass${}</ID>
-    <ID>EmptyClassBlock:standardlib.kt$MyComperable${}</ID>
+    <ID>EmptyClassBlock:standardlib.kt$MyComparable${}</ID>
     <ID>EmptyClassBlock:standardlib.kt$MyList${}</ID>
     <ID>EmptyClassBlock:standardlib.kt$MyThread${}</ID>
     <ID>EmptyDefaultConstructor:BigFile.kt$BigFile.A$()</ID>

gradle/libs.versions.toml

@@ -1,9 +1,10 @@
 [versions]
 kotlinVersion = "2.1.0"
-lsp4jVersion = "0.21.2"
-exposedVersion = "0.37.3"
+lsp4jVersion = "0.23.1"
+exposedVersion = "0.58.0"
 jmhVersion = "1.20"
-guavaVersion = "33.3.0-jre"
+slf4j = "2.0.16"
+guavaVersion = "33.4.0-jre"
 
 [libraries]
 org-jetbrains-kotlin-stdlib = { module = "org.jetbrains.kotlin:kotlin-stdlib", version.ref = "kotlinVersion" }
@@ -41,12 +42,16 @@ com-beust-jcommander = { module = "com.beust:jcommander", version = "1.78" }
 org-openjdk-jmh-generator-annprocess = { module = "org.openjdk.jmh:jmh-generator-annprocess", version.ref = "jmhVersion" }
 org-openjdk-jmh-core = { module = "org.openjdk.jmh:jmh-core", version.ref = "jmhVersion" }
 
-org-xerial-sqlite-jdbc = { module = "org.xerial:sqlite-jdbc", version = "3.41.2.1" }
+org-xerial-sqlite-jdbc = { module = "org.xerial:sqlite-jdbc", version = "3.48.0.0" }
 
 # buildSrc
-org-jetbrains-kotlin-gradle-plugin = { module = "org.jetbrains.kotlin:kotlin-gradle-plugin",version.ref = "kotlinVersion" }
+org-jetbrains-kotlin-gradle-plugin = { module = "org.jetbrains.kotlin:kotlin-gradle-plugin", version.ref = "kotlinVersion" }
+
+org-slf4j-api = { module = "org.slf4j:slf4j-api", version.ref = "slf4j" }
+org-slf4j-simple = { module = "org.slf4j:slf4j-simple", version.ref = "slf4j" }
+
 
 [plugins]
-com-github-jk1-tcdeps = { id = "com.github.jk1.tcdeps", version = "1.2" }
-com-jaredsburrows-license = { id = "com.jaredsburrows.license", version = "0.8.42" }
+com-github-jk1-tcdeps = { id = "com.github.jk1.tcdeps", version = "1.6.2" }
+com-jaredsburrows-license = { id = "com.jaredsburrows.license", version = "0.9.8" }
 io-gitlab-arturbosch-detekt = { id = "io.gitlab.arturbosch.detekt", version = "1.22.0" }

server/build.gradle.kts

@@ -9,8 +9,9 @@ plugins {
     id("kotlin-language-server.kotlin-conventions")
 }
 
+val serverDebugPort = 4000
 val debugPort = 8000
-val debugArgs = "-agentlib:jdwp=transport=dt_socket,server=y,address=8000,suspend=n,quiet=y"
+val debugArgs = "-agentlib:jdwp=transport=dt_socket,server=y,address=$debugPort,suspend=n,quiet=y"
 
 val serverMainClassName = "org.javacs.kt.MainKt"
 val applicationName = "kotlin-language-server"
@@ -20,8 +21,21 @@ application {
     description = "Code completions, diagnostics and more for Kotlin"
     applicationDefaultJvmArgs = listOf("-DkotlinLanguageServer.version=$version")
     applicationDistribution.into("bin") {
-        filePermissions { unix("755".toInt(radix = 8)) }
+        //fileMode = 755
+        filePermissions {
+            user {
+                read = true
+                execute = true
+                write = true
+            }
+            other {
+                read = true
+                write = false
+                execute = true
+            }
+        }
     }
+
 }
 
 repositories {
@@ -43,6 +57,9 @@ dependencies {
     implementation(libs.org.eclipse.lsp4j.lsp4j)
     implementation(libs.org.eclipse.lsp4j.jsonrpc)
 
+    implementation(libs.org.slf4j.api)
+    implementation(libs.org.slf4j.simple)
+
     implementation(kotlin("compiler"))
     implementation(kotlin("scripting-compiler"))
     implementation(kotlin("scripting-jvm-host-unshaded"))
@@ -74,8 +91,8 @@ configurations.forEach { config -> config.resolutionStrategy { preferProjectModu
 tasks.startScripts { applicationName = "kotlin-language-server" }
 
 tasks.register<Exec>("fixFilePermissions") {
-    // When running on macOS or Linux the start script
-    // needs executable permissions to run.
+    group = "Distribution"
+    description = "Fix file permissions for the start script on macOS or Linux."
 
     onlyIf { !System.getProperty("os.name").lowercase().contains("windows") }
     commandLine(
@@ -86,15 +103,20 @@ tasks.register<Exec>("fixFilePermissions") {
 }
 
 tasks.register<JavaExec>("debugRun") {
+    group = "Application"
+    description = "Run the application with debugging enabled."
     mainClass.set(serverMainClassName)
     classpath(sourceSets.main.get().runtimeClasspath)
     standardInput = System.`in`
 
     jvmArgs(debugArgs)
+    args(listOf("--tcpServerPort", serverDebugPort, "--tcpDebug", "--fullLog"))
     doLast { println("Using debug port $debugPort") }
 }
 
 tasks.register<CreateStartScripts>("debugStartScripts") {
+    group = "Distribution"
+    description = "Create start scripts with debug options for the application."
     applicationName = "kotlin-language-server"
     mainClass.set(serverMainClassName)
     outputDir = tasks.installDist.get().destinationDir.toPath().resolve("bin").toFile()
@@ -103,6 +125,8 @@ tasks.register<CreateStartScripts>("debugStartScripts") {
 }
 
 tasks.register<Sync>("installDebugDist") {
+    group = "Distribution"
+    description = "Install the debug distribution and create debug start scripts."
     dependsOn("installDist")
     finalizedBy("debugStartScripts")
 }